Prupe.2G239100_v2.0.a1

ARF guanine-nucleotide exchange factor GNOM-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0001807
Physical Location & Seq
Reverse (-)
25947769 .. 25953877
6109 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G239100.2

Sequence Viewer

Length: 4422 bp
ATGGGGCGTCTGAAGCTGCAAAATGGAATCAAGGCAATTGACGAAGAACCCGGGAACTGTGATGCAACATATTCTAAAAAAGATACTTTAGCATGCATCATTAATTCAGAAATAGGCGCTGTATTAGCGGTTATGAGGAGGAATGTAAGATGGGGAGGACGTTATATATCAGGTGATGATCAGCTGGAACACCCTCTAATCCAATCTTTAAAGGTGTTACGGAAGCAAATATTTTCGTGGCAGCATCAGTTGCATACCATCAATCCTGCTGCATATCTTCAGCCATTTTTGGATGTGATTAGATCAGATGAAACTGGTGCGCCAATCACTGGTGTGGCGTTGTCATCTGTTTACAATATCTTAACGCTTGATGTGATCGATCAAAATTCCGTAAATGTTGAAGATGCCATGCATTTGTTAGTTGATGCGATCACTGGCTGCCGATTTGAGGTGACTGATCCTGCATCAGAAGAAGTGGTACTGATGAAGATACTACAGGTTCTTCTGGCTTGCATGAAGAGTAAAGCGTCTGTTATATTGAGTAATCAGCATGTTTGCACTATAGTGAATACATGTTTCCGTATAGTCCATCAAGCAGGAACAAAAGGTGAGTTGTTGCAACGGATAGCTCGCCACACTATGCATGAACTGGTTAGATGTATTTTCTCACACCTTCCAGATGTTCAGAACACTGAACGTGCATTGTCAAATGGAAACAATACCATCAACCGAGAGATTGCTGGGATAAATAATGAGTACCCTTCTGGGAGTAGACAATTGGAGAATGGCAACGTGAGTTCTGAGTTTGACAGTCAGCTTTTATCCACAAATCCTGCCTTGAATGCTTCCTCAGGTCTTGTAGAATCTGGGATGGATGAAAAGACAACTGGGGCTTCTAGTGGGAAGGAGACTGTTCAATATGACTCGCGTCTCATGGCTGAGCCGTTTGGGGTCCCCTGTATGGTGGAAATATTTAACTTTCTGTGCTCTTTGTTAAATGTGGTCGAGCATATCGGTATGGGTCCCAGATCTAATACCATATCGTTTGATGAAGATGTGCCTCTTTTTGCCTTGGGATTGGTTAATTCTGCAATAGAGTTGGGTGGGTCCTCAATTCAGAACCACCCCAAGTTATTAAGTTTGGTTCAGGATGAATTGTTTCAAAATCTGATGCAGTTTGGCCTATCAATGAGTCCACTTATTCTTTCAATGGTATGCAGCATTGTTCTCAATTTGTATCACCATCTGCGCACTGAACTAAAGCTACAGCTTGAGGCATTCTTTTCTTGCGTGATATTGAGGCTTGCGCAAAGCAGGTATGGGGCTTCTTATCAGCAGCAGGAGGTTGCCATGGAGGCTGTTGTTGACTTCTGCAGGCAGAAAACTTTCATGGTGGAGATGTACGCTAACTTAGATTGTGACATAACCTGCAGTAATGCCTTTGAAGATCTTGCTAATCTGTTGTCAAAGAGTGCATTCCCTGTTAATTTCCCGTTGTCATCAATTCACATTCTTGCTTTGGATGGTCTTATTGCTATTATTCAGGGAATGGCAGAGAGGTCAGGTAACGGATCAGTTAGTTCTGCTGAGACTCTCACAAATCTTGAAGAGTATACCCCATTCTGGTTGATGAAGTGTGACGACTACAGTGATCCTAATCATTGGGTTCCATTTGTTCGCCGAAGGAAATACATAAAGAGAAGGCTGATGATTGGAGCCGATCATTTTAACCATGACCCAAAGAAAGGGCTGGAGTTCCTGCAAGGAACTCATCTCTTGCCTGACAAACTTGATCCTGAAAGCGTGGCCTGTTTTTTCAGGTACACTTCTGGGTTGGACAAGAATCTTGTTGGGGATTTCCTGGGAAACCATGATGAGTTTTGTATTCAGGTTCTTCATGAATTTGCTGGTACCTTTGATTTTCAAGATATGAATTTGGATACTGCTCTCCGACTTTTTTTGGAGACGTTTCGGCTGCCTGGAGAATCACAAAAGATACAAAGGGTGCTTGAAGCGTTTTCAGAGAGATATTATGAGCAATCACCACAAATTCTAGCTAACAAGGATGCTGCCCTCCTGTTATCATATTCGATTATAATGCTCAACACAGATCGACACAATGTTCAGGTAAAGAAGAAGATGACGGAGGAGGATTTCATTCGGAATAATCGGCACATCAATGGAGGTGATGATCTACCTCGAGAATTCCTGTCAGAGCTTTACCACTCAATATGCAAGAATGAGATCCGCACAACTCCTGAACAAGGCGCTAGTTTTCCTGAAATGACCCCAAGCCGTTGGATTGATTTAATACACAAATCCAAGAAGAATGCTCCATTCATTGTATCCAATTTCAGACCCCACCTTGACCAGGATATGTTTGCTATAATGTCGGGCCCTACAATTGCTGCCATCTCTGTGGTATTTGATCATGCAGAACATGAAGAGATTTACCAAACATGCATTGATGGATTTTTATCTGTTGCAAAGATTGCAGCATGCTATCATCTTGAAGATGTGCTGGACGACCTGGTTGTGTCTCTTTGTAAGTTCACAACCCTTTTAAACCCATCTGTTGACGAACCTGTGTTGGCGTTTGGCGATGACCCAAAAGCTAGAATGTCAACTGTGACCGTTTTCACAATTGCTAATACATATGGTGATTACATTCGCACGGGTTGGAGAAACATTCTTGACTGCATCTTAAGATTACACAAGCTTGGTCTTCTTTCAGCTTGTGTAGCGAGTGAAGCAGCTGGTGATTCGGAGGTTTCCGCTGACACAGGTCATGGCAACCCCATAACCAATTCTCTATCTTCTGTTCATATGCCCTCTGTGAGTACTCCTAGGAGATCCTCTGGATTGATGGGCCGGTTTAGTCAGCTCCTATCTCTTGACACAGAGGAGCCGAGATCGCAGCCTACTGAAGAAGAACTTGCTGCTCATCAACGCACCCTTCAGACAGTTCAAAAGTGCCACATTGATGGCATTTTTTCTGATAGCAAGTTTCTGCAGGCTGAATCCCTCTTGCAACTTGCGCAAGCACTGATCTGGGCTGGAGGACGACCTCACAAAGGGAGCAGCTCACCCGAGGATGAAGATACTGGAGTTTTTTGTTTGGAGTTGCTGATTGCTATTACCTTAAATAATAGGGATAGGATTATGCTTCTTTGGCAGATTGTGTATGAGCACATATCAAACATTGTTCAGTCAACTGTGATGCCTTGTGCGCTGGTAGAGAAGGCTGTTTTTGGACTTCTTCGGATTTGCCAGCGGCTGCTTCCCTATAAAGAGAACCTTGCGGATGAACTTTTGAGGTCACTGCAACTTGTCTTGAAGCTTGATGCACGGGTTGCTGATGCGTACTGTGAGCAAATTACACAGGAAGTTGGCCGCCTTGTGAAAGCAAATGCCTCGCACATAAGATCACAATTGGGGTGGCGCATAATTACGTCATTGCTCTCAATCACTGCTCGGCACCCGGAAGCTTCTGAGGCTGGATTTGATGCGCTGTTCTTCATTATGTCTGATGGAACTCACTTGTTGCCAGCCAATTATGTTCTATGTGTTGATGCATCAAGACAGTTTGCTGAGTCTCGTGTTGGGGAGGTAGACCGATCTGTGTGTGCACTTGATCTAATGGCGGGATCTGTTGATTGTTTAGCAAGGTGGGTATGTGAGGCTAAGCAATCTATGAATGATGAGGAAGCTGTGAAAATGTCTCAAGATATCGGGAAAATGTCTCAAGATATCGGGGAAATGTGGTTGCGGCTTGTTCAGGGATTGAGAAAAGTTTGTTTAGACCAGAGAGAAGAGGTTAGGAACCATGCTCTGTCCTTGTTACGGAAGTGCTTGACTGGAGTGGATGGGATCCCTCTTCCACCTGGTCTTTGGTTGCAGTGCTTTGATATGGTGATCTTCACAATGCTTGATGACTTGCTTGAAATTGCACAGAGACACTCCCCAAAGGACTACCGGAACATGGAAGGCACACTTATCCTTGCCTTGAAGCTCTTGTCCAAAGTTTTTCTGCAGCTTCTACCTGACCTATCACAGTTAACAACTTTCTGCAAATTATGGCTGGGCGTTCTCAGTCGAATGGAAAAATATATGAAGGTGAAAATTGGGGGGAAGAAAAGTGATAAGCTTCGGGACCAAGTACCTGAGCTACTTAAGAACACCTTGCTTGTAATGATTTTAAGGGGAGTTCTTGTGGAGAGAAGTGATTTAGGAGATGATAGCTTGTGGGAGCTGACATGGCGACTTGTAAATAACATTGCTCCATCCTTGCAGTCTGAGATTTTCCGTGATCCAATTTTAGAGCAGTCAGAGACTAAACAAGGTGAAACAGGAGGAGTTTCTGAAGCAACGGGTACTTTACTTCCAACTGATACGACTTCTGCTGAAGGTTCCGGCAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0000281 GO:0000578 GO:0000902 GO:0000910 GO:0000911 GO:0001736 GO:0001738 GO:0002009 GO:0003006 GO:0003674 GO:0005085 GO:0005086 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007049 GO:0007155 GO:0007164 GO:0007275 GO:0007389 GO:0008150 GO:0009605 GO:0009606 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009826 GO:0009880 GO:0009888 GO:0009914 GO:0009926 GO:0009942 GO:0009987 GO:0010008 GO:0010015 GO:0010053 GO:0010054 GO:0010087 GO:0010101 GO:0010102 GO:0010154 GO:0010274 GO:0010311 GO:0010540 GO:0010817 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016197 GO:0019899 GO:0021700 GO:0022402 GO:0022414 GO:0022610 GO:0022622 GO:0030154 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032506 GO:0032509 GO:0032879 GO:0032989 GO:0040007 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0046907 GO:0046983 GO:0048209 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048646 GO:0048729 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051179 GO:0051234 GO:0051301 GO:0051641 GO:0051649 GO:0060341 GO:0060429 GO:0060560 GO:0060627 GO:0060918 GO:0061458 GO:0061640 GO:0065007 GO:0065008 GO:0065009 GO:0071554 GO:0071555 GO:0071695 GO:0071840 GO:0071944 GO:0071985 GO:0090558 GO:0090627 GO:0090696 GO:0090697 GO:0090698 GO:0097708 GO:0098588 GO:0098657 GO:0098772 GO:0098791 GO:0098805 GO:0099402 GO:1902410 GO:1903047 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Sec7 Sec7_N

Protein Analysis

1474

Amino Acids

164.52

Weight (kDa)

5.33

Isoelectric Point (pI)

50.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2096
Acc16I TGCGCA 3 cut(s) 1250, 1308, 3039
Acc36I ACCTGC 2 cut(s) 1305, 1436
Acc65I GGTACC 1 cut(s) 1910
AccB1I GGYRCC 2 cut(s) 1910, 3477
AccB7I CCANNNNNTGG 1 cut(s) 329
AccI GTMKAC 3 cut(s) 772, 1613, 3612
AccII CGCG 1 cut(s) 928
AciI CCGC 8 cut(s) 128, 2248, 2775, 3274, 3302, 3394, 3644, 3769
AcoI YGGCCR 1 cut(s) 3391
AcsI RAATTY 5 cut(s) 385, 1901, 1933, 2049, 2204
AcuI CTGAAG 5 cut(s) 32, 263, 2942, 2946, 4383
AcyI GRCGYC 1 cut(s) 7
AfaI GTAC 9 cut(s) 480, 758, 1403, 1823, 1912, 2842, 3365, 4161, 4375
AflII CTTAAG 2 cut(s) 2704, 4172
AflIII ACRYGT 1 cut(s) 572
AjnI CCWGG 5 cut(s) 1860, 1978, 2370, 2529, 3883
AleI CACNNNNGTG 2 cut(s) 332, 563
Alw21I GWGCWC 3 cut(s) 989, 3192, 3631
Alw44I GTGCAC 1 cut(s) 3627
AlwNI CAGNNNCTG 1 cut(s) 3277
Ama87I CYCGRG 3 cut(s) 50, 2199, 3089
AoxI GGCC 5 cut(s) 1180, 1806, 2395, 2869, 3391
ApaI GGGCCC 1 cut(s) 2399
ApaLI GTGCAC 1 cut(s) 3627
ApoI RAATTY 5 cut(s) 385, 1901, 1933, 2049, 2204
AseI ATTAAT 1 cut(s) 102
Asp700I GAANNNNTTC 2 cut(s) 1158, 1385
Asp718I GGTACC 1 cut(s) 1910
AspA2I CCTAGG 1 cut(s) 2846
AspLEI GCGC 9 cut(s) 119, 322, 1251, 1309, 2270, 3040, 3232, 3444, 3511
AspS9I GGNCC 7 cut(s) 952, 1022, 1107, 2395, 2396, 2869, 4153
AsuC2I CCSGG 3 cut(s) 51, 52, 3482
AvaI CYCGRG 3 cut(s) 50, 2199, 3089
AvaII GGWCC 4 cut(s) 952, 1022, 1107, 4153
AvrII CCTAGG 1 cut(s) 2846
AxyI CCTNAGG 1 cut(s) 850
BaeGI GKGCMC 2 cut(s) 2399, 3631
BaeI ACNNNNGTAYC 2 cut(s) 3093, 3126
BamHI GGATCC 1 cut(s) 3870
BanI GGYRCC 2 cut(s) 1910, 3477
BanII GRGCYC 1 cut(s) 2399
BarI GAAGNNNNNNTAC 2 cut(s) 462, 494
BauI CACGAG 1 cut(s) 3597
BbsI GAAGAC 1 cut(s) 2717
Bbv12I GWGCWC 3 cut(s) 989, 3192, 3631
BceAI ACGGC 2 cut(s) 928, 2280
BcgI CGANNNNNNTGC 4 cut(s) 2080, 2114, 3396, 3430
BciT130I CCWGG 5 cut(s) 1862, 1980, 2372, 2531, 3885
BciVI GTATCC 2 cut(s) 1933, 2356
BclI TGATCA 2 cut(s) 178, 2428
BcnI CCSGG 3 cut(s) 51, 52, 3482
BfaI CTAG 5 cut(s) 897, 2054, 2271, 2616, 2847
BfmI CTRYAG 8 cut(s) 494, 561, 1265, 1372, 1429, 1645, 3011, 4031
BfoI RGCGCY 2 cut(s) 120, 2271
BfrI CTTAAG 2 cut(s) 2704, 4172
BfuAI ACCTGC 2 cut(s) 1305, 1436
BfuI GTATCC 2 cut(s) 1933, 2356
BglI GCCNNNNNGGC 1 cut(s) 1355
BglII AGATCT 2 cut(s) 1028, 1447
BlnI CCTAGG 1 cut(s) 2846
BlpI GCTNAGC 2 cut(s) 939, 3684
BmcAI AGTACT 1 cut(s) 2842
Bme1390I CCNGG 8 cut(s) 51, 52, 1862, 1980, 2372, 2531, 3482, 3885
Bme18I GGWCC 4 cut(s) 952, 1022, 1107, 4153
BmeT110I CYCGRG 3 cut(s) 50, 2199, 3089
BmgT120I GGNCC 7 cut(s) 952, 1022, 1107, 2395, 2396, 2869, 4153
BmrFI CCNGG 8 cut(s) 51, 52, 1862, 1980, 2372, 2531, 3482, 3885
BmrI ACTGGG 1 cut(s) 897
BmuI ACTGGG 1 cut(s) 897
BoxI GACNNNNGTC 2 cut(s) 927, 2784
BpiI GAAGAC 1 cut(s) 2717
BpmI CTGGAG 5 cut(s) 1772, 2001, 3078, 3126, 3879
Bpu10I CCTNAGC 1 cut(s) 4164
Bpu1102I GCTNAGC 2 cut(s) 939, 3684
BpuEI CTTGAG 3 cut(s) 1292, 3708, 3729
BpuMI CCSGG 3 cut(s) 51, 52, 3482
Bsa29I ATCGAT 1 cut(s) 378
BsaBI GATNNNNATC 2 cut(s) 1656, 2476
BsaHI GRCGYC 1 cut(s) 7
BsaJI CCNNGG 6 cut(s) 50, 1071, 1350, 1861, 2846, 3090
BsaWI WCCGGW 1 cut(s) 3975
BsaXI ACNNNNNCTCC 2 cut(s) 4197, 4227
Bse118I RCCGGY 1 cut(s) 2871
Bse1I ACTGG 7 cut(s) 319, 334, 439, 654, 892, 3109, 3862
Bse21I CCTNAGG 1 cut(s) 850
Bse3DI GCAATG 2 cut(s) 3455, 4275
Bse8I GATNNNNATC 2 cut(s) 1656, 2476
BseBI CCWGG 5 cut(s) 1862, 1980, 2372, 2531, 3885
BseCI ATCGAT 1 cut(s) 378
BseDI CCNNGG 6 cut(s) 50, 1071, 1350, 1861, 2846, 3090
BseJI GATNNNNATC 2 cut(s) 1656, 2476
BseMI GCAATG 2 cut(s) 3455, 4275
BseMII CTCAG 9 cut(s) 792, 864, 930, 1578, 3483, 3582, 4105, 4155, 4287
BseNI ACTGG 7 cut(s) 319, 334, 439, 654, 892, 3109, 3862
BseRI GAGGAG 4 cut(s) 151, 2162, 2918, 4368
BseSI GKGCMC 2 cut(s) 2399, 3631
BseYI CCCAGC 2 cut(s) 740, 4081
Bsh1236I CGCG 1 cut(s) 928
BshFI GGCC 5 cut(s) 1182, 1808, 2397, 2871, 3393
BshNI GGYRCC 2 cut(s) 1910, 3477
BshVI ATCGAT 1 cut(s) 378
BsiHKAI GWGCWC 3 cut(s) 989, 3192, 3631
BsiHKCI CYCGRG 3 cut(s) 50, 2199, 3089
BsiSI CCGG 5 cut(s) 51, 2872, 3482, 3976, 4413
BslFI GGGAC 3 cut(s) 938, 1008, 4166
BsmBI CGTCTC 2 cut(s) 935, 1958
BsmFI GGGAC 3 cut(s) 938, 1008, 4166
BsmI GAATGC 4 cut(s) 847, 1277, 1475, 2335
BsnI GGCC 5 cut(s) 1182, 1808, 2397, 2871, 3393
BsoBI CYCGRG 3 cut(s) 50, 2199, 3089
Bsp120I GGGCCC 1 cut(s) 2395
Bsp1286I GDGCHC 4 cut(s) 989, 2399, 3192, 3631
Bsp1720I GCTNAGC 2 cut(s) 939, 3684
Bsp19I CCATGG 1 cut(s) 1350
BspACI CCGC 8 cut(s) 128, 2248, 2775, 3274, 3302, 3394, 3644, 3769
BspANI GGCC 5 cut(s) 1182, 1808, 2397, 2871, 3393
BspCNI CTCAG 9 cut(s) 793, 863, 931, 1579, 3484, 3583, 4104, 4156, 4288
BspDI ATCGAT 1 cut(s) 378
BspFNI CGCG 1 cut(s) 928
BspHI TCATGA 1 cut(s) 1897
BspMAI CTGCAG 4 cut(s) 1376, 1433, 3015, 4035
BspMI ACCTGC 2 cut(s) 1305, 1436
BspT107I GGYRCC 2 cut(s) 1910, 3477
BspTI CTTAAG 2 cut(s) 2704, 4172
BsrDI GCAATG 2 cut(s) 3455, 4275
BsrFI RCCGGY 1 cut(s) 2871
BsrI ACTGG 7 cut(s) 319, 334, 439, 654, 892, 3109, 3862
BssAI RCCGGY 1 cut(s) 2871
BssECI CCNNGG 6 cut(s) 50, 1071, 1350, 1861, 2846, 3090
BssNAI GTATAC 1 cut(s) 1614
BssNI GRCGYC 1 cut(s) 7
BssSI CACGAG 1 cut(s) 3597
BssT1I CCWWGG 3 cut(s) 1071, 1350, 2846
Bst1107I GTATAC 1 cut(s) 1614
Bst2BI CACGAG 1 cut(s) 3597
Bst2UI CCWGG 5 cut(s) 1862, 1980, 2372, 2531, 3885
Bst6I CTCTTC 5 cut(s) 512, 1602, 2439, 3807, 3882
BstACI GRCGYC 1 cut(s) 7
BstAFI CTTAAG 2 cut(s) 2704, 4172
BstAPI GCANNNNNTGC 3 cut(s) 250, 2492, 3353
BstDSI CCRYGG 1 cut(s) 1350
BstENI CCTNNNNNAGG 3 cut(s) 2262, 2369, 3072
BstFNI CGCG 1 cut(s) 928
BstH2I RGCGCY 2 cut(s) 120, 2271
BstHHI GCGC 9 cut(s) 119, 322, 1251, 1309, 2270, 3040, 3232, 3444, 3511
BstNI CCWGG 5 cut(s) 1862, 1980, 2372, 2531, 3885
BstNSI RCATGY 5 cut(s) 96, 554, 576, 2463, 2502
BstPAI GACNNNNGTC 2 cut(s) 927, 2784
BstSCI CCNGG 8 cut(s) 49, 50, 1860, 1978, 2370, 2529, 3480, 3883
BstSFI CTRYAG 8 cut(s) 494, 561, 1265, 1372, 1429, 1645, 3011, 4031
BstSLI GKGCMC 2 cut(s) 2399, 3631
BstUI CGCG 1 cut(s) 928
BstV2I GAAGAC 1 cut(s) 2717
BstX2I RGATCY 6 cut(s) 1028, 1447, 2244, 2852, 3647, 3870
BstXI CCANNNNNNTGG 3 cut(s) 2298, 2419, 2984
BstYI RGATCY 6 cut(s) 1028, 1447, 2244, 2852, 3647, 3870
BstZ17I GTATAC 1 cut(s) 1614
Bsu15I ATCGAT 1 cut(s) 378
Bsu36I CCTNAGG 1 cut(s) 850
BsuI GTATCC 2 cut(s) 1933, 2356
BsuRI GGCC 5 cut(s) 1182, 1808, 2397, 2871, 3393
BsuTUI ATCGAT 1 cut(s) 378
BtgI CCRYGG 1 cut(s) 1350
BtgZI GCGATG 1 cut(s) 2616
BtsI GCAGTG 3 cut(s) 3320, 3468, 3905
BtsIMutI CAGTG 9 cut(s) 327, 432, 690, 1251, 1654, 3044, 3320, 3468, 3905
BveI ACCTGC 2 cut(s) 1305, 1436
CaiI CAGNNNCTG 1 cut(s) 3277
CciI TCATGA 1 cut(s) 1897
CfoI GCGC 9 cut(s) 119, 322, 1251, 1309, 2270, 3040, 3232, 3444, 3511
Cfr10I RCCGGY 1 cut(s) 2871
Cfr13I GGNCC 7 cut(s) 952, 1022, 1107, 2395, 2396, 2869, 4153
Cfr9I CCCGGG 1 cut(s) 50
ClaI ATCGAT 1 cut(s) 378
CseI GACGC 2 cut(s) 516, 917
CsiI ACCWGGT 2 cut(s) 2529, 3883
Csp6I GTAC 9 cut(s) 479, 757, 1402, 1822, 1911, 2841, 3364, 4160, 4374
CspCI CAANNNNNGTGG 2 cut(s) 3419, 3454
CviQI GTAC 9 cut(s) 479, 757, 1402, 1822, 1911, 2841, 3364, 4160, 4374
DraI TTTAAA 2 cut(s) 210, 2565
EaeI YGGCCR 1 cut(s) 3391
Eam1104I CTCTTC 5 cut(s) 512, 1602, 2439, 3807, 3882
EarI CTCTTC 5 cut(s) 512, 1602, 2439, 3807, 3882
Eco130I CCWWGG 3 cut(s) 1071, 1350, 2846
Eco24I GRGCYC 1 cut(s) 2399
Eco32I GATATC 2 cut(s) 3730, 3751
Eco47I GGWCC 4 cut(s) 952, 1022, 1107, 4153
Eco57I CTGAAG 5 cut(s) 32, 263, 2942, 2946, 4383
Eco81I CCTNAGG 1 cut(s) 850
Eco88I CYCGRG 3 cut(s) 50, 2199, 3089
EcoNI CCTNNNNNAGG 3 cut(s) 2262, 2369, 3072
EcoO109I RGGNCCY 4 cut(s) 952, 1022, 1107, 2396
EcoRI GAATTC 1 cut(s) 2204
EcoRII CCWGG 5 cut(s) 1860, 1978, 2370, 2529, 3883
EcoRV GATATC 2 cut(s) 3730, 3751
EcoT14I CCWWGG 3 cut(s) 1071, 1350, 2846
EcoT22I ATGCAT 5 cut(s) 98, 414, 645, 2465, 3577
EcoT38I GRGCYC 1 cut(s) 2399
ErhI CCWWGG 3 cut(s) 1071, 1350, 2846
Esp3I CGTCTC 2 cut(s) 935, 1958
FalI AAGNNNNNCTT 8 cut(s) 2919, 2951, 3282, 3314, 3978, 4010, 4166, 4198
FaqI GGGAC 3 cut(s) 938, 1008, 4166
FauI CCCGC 1 cut(s) 3637
FauNDI CATATG 2 cut(s) 2656, 2826
FbaI TGATCA 2 cut(s) 178, 2428
FblI GTMKAC 3 cut(s) 772, 1613, 3612
FriOI GRGCYC 1 cut(s) 2399
FspBI CTAG 5 cut(s) 897, 2054, 2271, 2616, 2847
FspI TGCGCA 3 cut(s) 1250, 1308, 3039
GlaI GCGC 9 cut(s) 118, 321, 1250, 1308, 2269, 3039, 3231, 3443, 3510
GsaI CCCAGC 2 cut(s) 744, 4085
GsuI CTGGAG 5 cut(s) 1772, 2001, 3078, 3126, 3879
HaeII RGCGCY 2 cut(s) 120, 2271
HaeIII GGCC 5 cut(s) 1182, 1808, 2397, 2871, 3393
HapII CCGG 5 cut(s) 51, 2872, 3482, 3976, 4413
HgaI GACGC 2 cut(s) 516, 917
HhaI GCGC 9 cut(s) 119, 322, 1251, 1309, 2270, 3040, 3232, 3444, 3511
Hin1I GRCGYC 1 cut(s) 7
Hin6I GCGC 9 cut(s) 117, 320, 1249, 1307, 2268, 3038, 3230, 3442, 3509
HinP1I GCGC 9 cut(s) 117, 320, 1249, 1307, 2268, 3038, 3230, 3442, 3509
HincII GTYRAC 5 cut(s) 1366, 2578, 2625, 3213, 4059
HindII GTYRAC 5 cut(s) 1366, 2578, 2625, 3213, 4059
HindIII AAGCTT 4 cut(s) 2717, 3338, 3486, 4145
HpaI GTTAAC 1 cut(s) 4059
HpaII CCGG 5 cut(s) 51, 2872, 3482, 3976, 4413
HpyCH4IV ACGT 5 cut(s) 160, 697, 792, 1967, 3452
HpySE526I ACGT 5 cut(s) 160, 697, 792, 1967, 3452
Hsp92I GRCGYC 1 cut(s) 7
HspAI GCGC 9 cut(s) 117, 320, 1249, 1307, 2268, 3038, 3230, 3442, 3509
KflI GGGWCCC 2 cut(s) 952, 1022
KpnI GGTACC 1 cut(s) 1914
Ksp22I TGATCA 2 cut(s) 178, 2428
KspAI GTTAAC 1 cut(s) 4059
LmnI GCTCC 7 cut(s) 1715, 2338, 2889, 2905, 3078, 4249, 4285
MabI ACCWGGT 2 cut(s) 2529, 3883
MaeI CTAG 5 cut(s) 897, 2054, 2271, 2616, 2847
MaeII ACGT 5 cut(s) 160, 697, 792, 1967, 3452
MaeIII GTNAC 8 cut(s) 216, 451, 1418, 1565, 1637, 2629, 3318, 3840
MfeI CAATTG 5 cut(s) 36, 776, 2403, 2643, 3431
MflI RGATCY 6 cut(s) 1028, 1447, 2244, 2852, 3647, 3870
MhlI GDGCHC 4 cut(s) 989, 2399, 3192, 3631
MlyI GAGTC 4 cut(s) 917, 1201, 1585, 3602
MmeI TCCRAC 5 cut(s) 1815, 1975, 2279, 2660, 4409
Mph1103I ATGCAT 5 cut(s) 98, 414, 645, 2465, 3577
MroXI GAANNNNTTC 2 cut(s) 1158, 1385
MslI CAYNNNNRTG 5 cut(s) 332, 563, 2178, 2417, 2982
MspA1I CMGCKG 4 cut(s) 184, 2756, 2777, 3274
MspCI CTTAAG 2 cut(s) 2704, 4172
MspI CCGG 5 cut(s) 51, 2872, 3482, 3976, 4413
MspR9I CCNGG 8 cut(s) 51, 52, 1862, 1980, 2372, 2531, 3482, 3885
MunI CAATTG 5 cut(s) 36, 776, 2403, 2643, 3431
Mva1269I GAATGC 4 cut(s) 847, 1277, 1475, 2335
MvaI CCWGG 5 cut(s) 1862, 1980, 2372, 2531, 3885
MvnI CGCG 1 cut(s) 928
NciI CCSGG 3 cut(s) 51, 52, 3482
NcoI CCATGG 1 cut(s) 1350
NdeI CATATG 2 cut(s) 2656, 2826
NmeAIII GCCGAG 2 cut(s) 2934, 3454
NmuCI GTSAC 5 cut(s) 451, 1418, 1637, 2629, 3318
NsbI TGCGCA 3 cut(s) 1250, 1308, 3039
NsiI ATGCAT 5 cut(s) 98, 414, 645, 2465, 3577
NspI RCATGY 5 cut(s) 96, 554, 576, 2463, 2502
OliI CACNNNNGTG 2 cut(s) 332, 563
PaeI GCATGC 2 cut(s) 96, 2502
PaeR7I CTCGAG 1 cut(s) 2199
PagI TCATGA 1 cut(s) 1897
PciI ACATGT 1 cut(s) 572
PctI GAATGC 4 cut(s) 847, 1277, 1475, 2335
PdmI GAANNNNTTC 2 cut(s) 1158, 1385
PfeI GAWTC 6 cut(s) 27, 863, 1843, 1985, 2762, 3020
PflMI CCANNNNNTGG 1 cut(s) 329
PleI GAGTC 4 cut(s) 917, 1200, 1585, 3601
PpsI GAGTC 4 cut(s) 917, 1200, 1585, 3601
PpuMI RGGWCCY 3 cut(s) 952, 1022, 1107
PscI ACATGT 1 cut(s) 572
PshAI GACNNNNGTC 2 cut(s) 927, 2784
PshBI ATTAAT 1 cut(s) 102
PsiI TTATAA 1 cut(s) 2096
Psp5II RGGWCCY 3 cut(s) 952, 1022, 1107
Psp6I CCWGG 5 cut(s) 1860, 1978, 2370, 2529, 3883
PspFI CCCAGC 2 cut(s) 740, 4081
PspGI CCWGG 5 cut(s) 1860, 1978, 2370, 2529, 3883
PspOMI GGGCCC 1 cut(s) 2395
PspPI GGNCC 7 cut(s) 952, 1022, 1107, 2395, 2396, 2869, 4153
PspPPI RGGWCCY 3 cut(s) 952, 1022, 1107
PsrI GAACNNNNNNTAC 2 cut(s) 1248, 1280
PstI CTGCAG 4 cut(s) 1376, 1433, 3015, 4035
PstNI CAGNNNCTG 1 cut(s) 3277
PsuI RGATCY 6 cut(s) 1028, 1447, 2244, 2852, 3647, 3870
PvuII CAGCTG 2 cut(s) 184, 2756
RsaI GTAC 9 cut(s) 480, 758, 1403, 1823, 1912, 2842, 3365, 4161, 4375
RsaNI GTAC 9 cut(s) 479, 757, 1402, 1822, 1911, 2841, 3364, 4160, 4374
RseI CAYNNNNRTG 5 cut(s) 332, 563, 2178, 2417, 2982
Sau96I GGNCC 7 cut(s) 952, 1022, 1107, 2395, 2396, 2869, 4153
ScaI AGTACT 1 cut(s) 2842
SchI GAGTC 4 cut(s) 917, 1201, 1585, 3602
ScrFI CCNGG 8 cut(s) 51, 52, 1862, 1980, 2372, 2531, 3482, 3885
SduI GDGCHC 4 cut(s) 989, 2399, 3192, 3631
SexAI ACCWGGT 2 cut(s) 2529, 3883
SfcI CTRYAG 8 cut(s) 494, 561, 1265, 1372, 1429, 1645, 3011, 4031
Sfr274I CTCGAG 1 cut(s) 2199
SinI GGWCC 4 cut(s) 952, 1022, 1107, 4153
SlaI CTCGAG 1 cut(s) 2199
SmaI CCCGGG 1 cut(s) 52
SmiMI CAYNNNNRTG 5 cut(s) 332, 563, 2178, 2417, 2982
SmlI CTYRAG 6 cut(s) 1271, 2199, 2704, 3723, 3744, 4172
SmoI CTYRAG 6 cut(s) 1271, 2199, 2704, 3723, 3744, 4172
SphI GCATGC 2 cut(s) 96, 2502
SsiI CCGC 8 cut(s) 128, 2248, 2775, 3274, 3302, 3394, 3644, 3769
SspI AATATT 2 cut(s) 231, 972
SspMI CTAG 5 cut(s) 897, 2054, 2271, 2616, 2847
StyD4I CCNGG 8 cut(s) 49, 50, 1860, 1978, 2370, 2529, 3480, 3883
StyI CCWWGG 3 cut(s) 1071, 1350, 2846
TaiI ACGT 5 cut(s) 163, 700, 795, 1970, 3455
TaqI TCGA 6 cut(s) 378, 1005, 2090, 2113, 2200, 4096
TaqII GACCGA 1 cut(s) 3630
TatI WGTACW 1 cut(s) 2840
TauI GCSGC 3 cut(s) 3277, 3396, 3772
TfiI GAWTC 6 cut(s) 27, 863, 1843, 1985, 2762, 3020
TscAI CASTG 9 cut(s) 334, 439, 697, 1258, 1654, 3051, 3327, 3475, 3905
TseFI GTSAC 5 cut(s) 451, 1418, 1637, 2629, 3318
Tsp45I GTSAC 5 cut(s) 451, 1418, 1637, 2629, 3318
TspGWI ACGGA 8 cut(s) 235, 379, 569, 637, 1584, 2159, 3859, 4295
TspMI CCCGGG 1 cut(s) 50
TspRI CASTG 9 cut(s) 334, 439, 697, 1258, 1654, 3051, 3327, 3475, 3905
Van91I CCANNNNNTGG 1 cut(s) 329
Vha464I CTTAAG 2 cut(s) 2704, 4172
VneI GTGCAC 1 cut(s) 3627
VpaK11BI GGWCC 4 cut(s) 952, 1022, 1107, 4153
VspI ATTAAT 1 cut(s) 102
XagI CCTNNNNNAGG 3 cut(s) 2262, 2369, 3072
XapI RAATTY 5 cut(s) 385, 1901, 1933, 2049, 2204
XceI RCATGY 5 cut(s) 96, 554, 576, 2463, 2502
XcmI CCANNNNNNNNNTGG 1 cut(s) 3888
XhoI CTCGAG 1 cut(s) 2199
XmaI CCCGGG 1 cut(s) 50
XmaJI CCTAGG 1 cut(s) 2846
XmiI GTMKAC 3 cut(s) 772, 1613, 3612
XmnI GAANNNNTTC 2 cut(s) 1158, 1385
XspI CTAG 5 cut(s) 897, 2054, 2271, 2616, 2847
ZrmI AGTACT 1 cut(s) 2842
Zsp2I ATGCAT 5 cut(s) 98, 414, 645, 2465, 3577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.