Prupe.2G239200_v2.0.a1

ARF guanine-nucleotide exchange factor GNOM-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
25954307 .. 25960609
6303 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G239200.2

Sequence Viewer

Length: 4404 bp
ATGGGCCGTCTAAAGTTGCAAAGTGGAATCAAGGCAATTGAGGAAGAACCCGAGGACTGTGATGCAACCTATTCCAATAAAGCTACATTAGCATGCATCATCAATTCAGAAATAGGTTCTGTATTAGCGGTTATGAGGAGGAATGTTAGATGGGGAGGACGTTATACATCAGGTGATGATCAGCTGGAGCATTCTCTAATCCAGTCTTTAAAGGCATTACGCAAGCAAATCTTTTCATGGCAACATCAATGGCATACCATCAATCCTGCTGTATATCTCCAGCCATTTTTGGATGTGATTAGGTCGGATGAAACTGGTGCACCAATCACCGGTGTCGCTTTGTCATCTGTTTATAATATCTTAACACTTGATGTGATGGATCAGAACTCCGTAAATGTTGAAGAGGCTATGCACTTGTTAGTGGATGCAACCACTAGTTGCCGTTTTGAGGTGACTGATCCTGCATCAGAAGAAGTGGTACTGATGAAGATACTTCAGGTGCTTCTGGCTTGCATGAAGAGTAAAGCATCTGTTATGTTGAGTAATCAGCATGTTTGCACTATAGTGAATACATGTTTCCGTATAGTTCATCAAGCAGGAACAAAAGGTGAGTTGTTGCAGCGGATAGCTCGTCACACAATGCATGAACTCGTCAGATGTATTTTCTCACATCTTCCAGATGTTAATGACACTGAACGTGCTTTGCTAAATGGAAGCAATACTGTCACGCAAGAGATCGCAGGGCTAAATAATGAGTATTCTTTTGGGAATAGACAATTGGAGAATGGCAATTTGAGTTCTGGGTATGATGGTCAACCATTATCCACAAATCCGGCCTCGAATTCTTCCTCAGGCCTAGTAGCATCTGTGATTGATGAAAATAAAATCGGGGATTCTACTGGGAAGGATGCTGTTCAATACGACTTGCATCTCATGACTGAGCCATATGGAGTCCCCTGCATGGTGGAAATATTTCACTTTCTATGTTCTTTGTTAAATATTTCTGAGCATATGGGAATGGGTCCCAGATCTAATACCATAGAATTTGATGAAGATGTGCCTTTTTTTGCCTTGGTTTTGATTAATTCAGCTATAGAGTTGGGTGGATCTTACATTCAGAATCACCCCAAGTTATTGAGTTTGGTTCAGGATGAATTGTTTCGGAATCTGATGCAATTTGGCCTATCAACAAGTCCAATTATTCTTTCAATGGTATGCAGCATTGTTCTTAATTTGTATCATCATCTGCGCACCGAACTTAAATTACAGCTTGAGGCTTTCTTTTCTTGTGTGATATTGAGGCTTGCACAAAGTAGATATGGAGCTTCTTATCAGCAGCAGGAGGTTGCCATGGAGGCTCTTGTTGACTTCTGCAGGCAGAAAACTTTCATGGTGGAGATGTACGCTAACTTAGATTGTGACATAACTTGCAGTAATGTCTTTGAAGAACTTGCTAATCTGCTGTCGAAAAGTGCATTCCCTGTCAATTGCCCTTTGTCTTCGATTCACATTCTTGCTTTGGATGGTCTTATTGCTGTTATTCAGGGAATGGCAGAGAGGGTAGGGAATGGATCAGTTAGTTCTGAGCATACTCCAGTGCATCTTGAAGAGTATACTCCATTCTGGATGGTGAAGTGCGAAAACTACAGTGATCCTACTGATTGGGTTCCATTTGTTCGCCGGAGGAAGTACATAAAGAGAAGGCTAATGATTGGAGCCGATCATTTTAACCGTGACCCGAAGAAAGGACTGGAGTTCCTCCAAGGAACACATCTCCTGCCTGACAAACTTGATCCGCAAAGTGTGGCCTGCTTTTTCAGGTACACTGCTGGGCTGGACAAGAATCTTGTTGGGGATTTTCTGGGAAATCATGATGAGTTTTGTGTTCAGGTTCTTCATAAATTTGCTGGTACCTTTGATTTCCAAGATATGAACTTGGATACTGCACTGCGACTTTTTTTGGAGACATTTCGGTTGCCTGGAGAATCTCAAAAGATACAAAGGGTTCTTGAAGCATTCTCAGAGAGATACTATGAGCAATCACCACTGATTCTAGCTAACAAGGATGCTGCTCTTCTGTTGTCTTATTCACTCATAATGCTCAATACAGATCAGCACAATGTTCAGGTAAAGAAGAAAATGACCGAGGAGGATTTCATTCGGAATAATAGACACATCAATGGAGGCAGTGATCTTCCTCGAGAATTCCTGTCAGAGCTTTACCACTCAATATGCAAGAATGAGATCCGCACAACTCCAGAGCAAGGTGCTGGTTATCCTGAAATGACGCCAAGCCGGTGGATTGATTTAATGCACAAATCCAAGAAGAATGCTCCATTCATTGTGTCCGATTCCAGAGCCTACCTGGACCACGATATGTTTGCTATAATGTCAGGCCCTACAATTGCTGCTATCTCTGTGGTATTTGATCATGCAGAGCATGAAGAGGTTTACCAAACATGCATTGATGGATTTTTAGCTGTTGCAAAGATTTCAGCATGCCATCATCTTGAAGATGTCCTGGATGATTTGGTTGTGTCTCTTTGTAAGTTCACAACCCTTTTAAACCCATCATCTGTTGAGGAACCTGTGCTAGCCTTTGGTGATGATGCAAAAGCTAGAATGGCAACTGTGACAGTTTTCACAATTGCCAATAGGTATGGTGATTACATTCGCACAGGTTGGAGAAATATTTTGGACTGCATCTTAAGATTACACAAGCTTGGTCTTCTTCCGGCTCGTGTGGCCAGTGATGCAGCTGATGAGTCAGAGTTTTCTGCTGACACAGGTCCCGGAAAGCCTATATCAAATTCTCTATCCTCTGTCCATATACCTTCCATAGGTACTCCTAGGAGATCCTCTGGATTGATGGGTCGGTTTAGTCAGCTCTTATCTCTTGAAACAGAGGAGCCGAGATCACAGCCTACTGAACAACAACTTGCTGCTCATCAGCGCACCCTTCAGACAATTCAAAAGTGCCACATTGACAGCATATTTACCGAGAGCAAGTTTTTGCAAGCTGAATCCCTGTTACAGCTTGCACGAGCACTGATTTGGGCTGCTGGCCGACCCCAAAAAGGGAACAGCTCTCCTGAGGATGAAGATACAGCAGTTTTCTGTTTGGAGTTGCTGATTGCTATTACCCTAAATAATAGGGATAGGATTGTGCTTCTATGGCAGGGGGTGTATGAGCACATATCCAGCATCGTTCAGTCAACTGTGATGCCTTGTGCTCTGGTAGAGAAGGCTGTTTTTGGACTTCTTCGGATTTGCCAGAGGCTACTTCCCTATAAGGAGAACCTTGCTGATGAACTTTTGAGGTCACTGCAGCTTGTGTTGAAGCTTGATGCTCGGGTTGCTGACGCTTACTGCGAGCAAATTACACAGGAAGTCAGTCGCCTTGTGAAAGCGAATGCCTCACACATCAGATCCCAGCTGGGGTGGCGCACAATTACATCCTTGCTCTCCATCACAGCCCGGCACCCGGAGGCTTCTGAGTCGGGGTTTGATGCACTGTTCTTCATTATGTCTGAGGGAACCCACTTGTTGCCAGCCAATTATGCTCTCTGCGTTGATGCTTCACGGCAGTTTGCTGAATCTCGTGTTGGGCAGGCAGAGCGATCTATATGCGCACTTGATCTTATGGCGGGTTCTGTTGATTGTTTAGCAAGGTGGGCCCGTGAGGCTAAGCAAGCCAGGAATGAGGAGGAAGTGGTGAAAATGTCTCAGGATATTGGGGAAATGTGGTTCCGGCTTGTTCAGGCACTGAGAAAAGTTTGTTTGGACCAGAGAGAAGATGTTAGGAACCATGCTTTGTCATTGTTGCAGAAGTGCTTGACAGGAGTGGATGGGATCCCTCTTCCACATAATCTGTGGTTACAGTGCTTTGATGTGGTGATCTTCACAATGCTTGATGACTTGCTTGAAATTGCACAGGGACACTCCCAGAAGGACTACCGCAACATGGAAGGCACACTTATCCTTGCCATGAAACTCTTGTCGAAAGTGTTTTTACAGCTACTACCTGACTTATCACAGCTAACAACTTTCTGCAAACTATGGCTGGGTGTTCTCAGCCGAATGGAAAAATACATGAAGGTGAAAGTTAGAGGGAAAAAAAGTGAGAAGCTTCAGGACCAAGTACCTGAGCTTCTGAAGAACACCTTGCTTGTGATGAATTTAAAGGGAGTGCTTGTACAAAGGAGCGCTCTAGGAGGAGATAGCTTGTGGGAGCTGACATGGCTACATGTCAATAACATTGCTCCAACCTTGCAATCCGAGGTTTTCCCTGATCAAATTTCAGAGCAGTCAGAGACTAAGCAGGGTGAAAATGGGGGAAGTCTAGTTTCTGATGAAACGGGTACCCTACTTCCAACTGAAATGGTGTCTGCAACTGGAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0000281 GO:0000578 GO:0000902 GO:0000910 GO:0000911 GO:0001736 GO:0001738 GO:0002009 GO:0003006 GO:0003674 GO:0005085 GO:0005086 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007049 GO:0007155 GO:0007164 GO:0007275 GO:0007389 GO:0008150 GO:0009605 GO:0009606 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009826 GO:0009880 GO:0009888 GO:0009914 GO:0009926 GO:0009942 GO:0009987 GO:0010008 GO:0010015 GO:0010053 GO:0010054 GO:0010087 GO:0010101 GO:0010102 GO:0010154 GO:0010274 GO:0010311 GO:0010540 GO:0010817 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016197 GO:0019899 GO:0021700 GO:0022402 GO:0022414 GO:0022610 GO:0022622 GO:0030154 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032506 GO:0032509 GO:0032879 GO:0032989 GO:0040007 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0046907 GO:0046983 GO:0048209 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048646 GO:0048729 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051179 GO:0051234 GO:0051301 GO:0051641 GO:0051649 GO:0060341 GO:0060429 GO:0060560 GO:0060627 GO:0060918 GO:0061458 GO:0061640 GO:0065007 GO:0065008 GO:0065009 GO:0071554 GO:0071555 GO:0071695 GO:0071840 GO:0071944 GO:0071985 GO:0090558 GO:0090627 GO:0090696 GO:0090697 GO:0090698 GO:0097708 GO:0098588 GO:0098657 GO:0098772 GO:0098791 GO:0098805 GO:0099402 GO:1902410 GO:1903047 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1468

Amino Acids

164.32

Weight (kDa)

5.52

Isoelectric Point (pI)

51.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 354
Acc16I TGCGCA 2 cut(s) 1250, 3631
Acc65I GGTACC 2 cut(s) 1910, 4361
AccB1I GGYRCC 3 cut(s) 1910, 3480, 4361
AccI GTMKAC 1 cut(s) 1613
AciI CCGC 6 cut(s) 128, 622, 1796, 2248, 3647, 3958
AcoI YGGCCR 2 cut(s) 2745, 3064
AcsI RAATTY 7 cut(s) 841, 1043, 1901, 2204, 2809, 4177, 4296
AcuI CTGAAG 4 cut(s) 479, 2945, 4115, 4175
AcyI GRCGYC 1 cut(s) 2288
AfaI GTAC 9 cut(s) 480, 1403, 1691, 1823, 1912, 2845, 4143, 4197, 4363
AfeI AGCGCT 1 cut(s) 4207
AflII CTTAAG 1 cut(s) 2707
AflIII ACRYGT 2 cut(s) 572, 4246
AgeI ACCGGT 1 cut(s) 329
AhlI ACTAGT 1 cut(s) 434
AjnI CCWGG 4 cut(s) 1978, 2364, 2520, 3695
AjuI GAANNNNNNNTTGG 6 cut(s) 761, 793, 1189, 1221, 3588, 3620
AleI CACNNNNGTG 1 cut(s) 563
AloI GAACNNNNNNTCC 2 cut(s) 3731, 3763
Alw21I GWGCWC 4 cut(s) 322, 3049, 3195, 3235
Alw26I GTCTC 4 cut(s) 1958, 2544, 3729, 4307
Alw44I GTGCAC 1 cut(s) 318
AlwNI CAGNNNCTG 1 cut(s) 3766
Ama87I CYCGRG 3 cut(s) 50, 2199, 3351
Aor51HI AGCGCT 1 cut(s) 4207
AoxI GGCC 9 cut(s) 4, 834, 853, 1180, 1806, 2395, 2745, 3064, 3675
ApaI GGGCCC 1 cut(s) 3679
ApaLI GTGCAC 1 cut(s) 318
ApeKI GCWGC 9 cut(s) 619, 1218, 1336, 2069, 2408, 2756, 2942, 3059, 3328
ApoI RAATTY 7 cut(s) 841, 1043, 1901, 2204, 2809, 4177, 4296
AseI ATTAAT 1 cut(s) 1083
AsiGI ACCGGT 1 cut(s) 329
Asp700I GAANNNNTTC 3 cut(s) 972, 1158, 1385
Asp718I GGTACC 2 cut(s) 1910, 4361
AspA2I CCTAGG 1 cut(s) 2849
AspLEI GCGC 5 cut(s) 1251, 2955, 3447, 3632, 4208
AspS9I GGNCC 9 cut(s) 4, 1022, 2368, 2396, 2789, 3675, 3676, 3784, 4135
AsuC2I CCSGG 3 cut(s) 2793, 3478, 3485
AsuNHI GCTAGC 1 cut(s) 2593
AvaI CYCGRG 3 cut(s) 50, 2199, 3351
AvaII GGWCC 5 cut(s) 1022, 2368, 2789, 3784, 4135
AvrII CCTAGG 1 cut(s) 2849
AxyI CCTNAGG 2 cut(s) 850, 3093
BaeGI GKGCMC 2 cut(s) 322, 3679
BaeI ACNNNNGTAYC 2 cut(s) 3096, 3129
BalI TGGCCA 1 cut(s) 2747
BamHI GGATCC 1 cut(s) 3852
BanI GGYRCC 3 cut(s) 1910, 3480, 4361
BanII GRGCYC 1 cut(s) 3679
BarI GAAGNNNNNNTAC 4 cut(s) 462, 494, 4134, 4166
BauI CACGAG 3 cut(s) 2739, 3042, 3600
BbsI GAAGAC 2 cut(s) 1491, 2720
Bbv12I GWGCWC 4 cut(s) 322, 3049, 3195, 3235
BbvI GCAGC 9 cut(s) 631, 1230, 1348, 2056, 2395, 2768, 2929, 3046, 3340
BceAI ACGGC 2 cut(s) 426, 3599
BcgI CGANNNNNNTGC 4 cut(s) 2363, 2397, 3609, 3643
BciT130I CCWGG 4 cut(s) 1980, 2366, 2522, 3697
BciVI GTATCC 1 cut(s) 1933
BclI TGATCA 3 cut(s) 178, 2428, 4291
BcnI CCSGG 3 cut(s) 2793, 3478, 3485
BcoDI GTCTC 4 cut(s) 1958, 2544, 3729, 4307
BcuI ACTAGT 1 cut(s) 434
BfaI CTAG 8 cut(s) 435, 857, 2054, 2594, 2619, 2850, 4211, 4343
BfmI CTRYAG 5 cut(s) 561, 1092, 1372, 1645, 3326
BfoI RGCGCY 1 cut(s) 4209
BfrI CTTAAG 1 cut(s) 2707
BfuI GTATCC 1 cut(s) 1933
BglI GCCNNNNNGGC 2 cut(s) 1355, 3683
BglII AGATCT 1 cut(s) 1028
BisI GCNGC 9 cut(s) 620, 1219, 1337, 2070, 2409, 2757, 2943, 3060, 3329
BlnI CCTAGG 1 cut(s) 2849
BlpI GCTNAGC 1 cut(s) 3687
BlsI GCNGC 9 cut(s) 621, 1220, 1338, 2071, 2410, 2758, 2944, 3061, 3330
Bme1390I CCNGG 7 cut(s) 1980, 2366, 2522, 2793, 3478, 3485, 3697
Bme18I GGWCC 5 cut(s) 1022, 2368, 2789, 3784, 4135
BmeT110I CYCGRG 3 cut(s) 50, 2199, 3351
BmgT120I GGNCC 9 cut(s) 4, 1022, 2368, 2396, 2789, 3675, 3676, 3784, 4135
BmrFI CCNGG 7 cut(s) 1980, 2366, 2522, 2793, 3478, 3485, 3697
BmrI ACTGGG 1 cut(s) 909
BmtI GCTAGC 1 cut(s) 2597
BmuI ACTGGG 1 cut(s) 909
BoxI GACNNNNGTC 1 cut(s) 2787
BpiI GAAGAC 2 cut(s) 1491, 2720
BpmI CTGGAG 6 cut(s) 206, 263, 1578, 1772, 2001, 2241
Bpu10I CCTNAGC 1 cut(s) 4146
Bpu1102I GCTNAGC 1 cut(s) 3687
BpuEI CTTGAG 1 cut(s) 1292
BpuMI CCSGG 3 cut(s) 2793, 3478, 3485
BsaHI GRCGYC 1 cut(s) 2288
BsaJI CCNNGG 7 cut(s) 51, 1071, 1350, 1762, 2145, 2849, 4278
BsaWI WCCGGW 1 cut(s) 329
BsaXI ACNNNNNCTCC 2 cut(s) 4179, 4209
Bse118I RCCGGY 2 cut(s) 329, 2295
Bse1I ACTGG 7 cut(s) 202, 319, 904, 1595, 1755, 2748, 4399
Bse21I CCTNAGG 2 cut(s) 850, 3093
Bse3DI GCAATG 1 cut(s) 4257
BseBI CCWGG 4 cut(s) 1980, 2366, 2522, 3697
BseDI CCNNGG 7 cut(s) 51, 1071, 1350, 1762, 2145, 2849, 4278
BseMI GCAATG 1 cut(s) 4257
BseNI ACTGG 7 cut(s) 202, 319, 904, 1595, 1755, 2748, 4399
BseRI GAGGAG 5 cut(s) 151, 2162, 2921, 3719, 4230
BseSI GKGCMC 2 cut(s) 322, 3679
BseXI GCAGC 9 cut(s) 631, 1230, 1348, 2056, 2395, 2768, 2929, 3046, 3340
BseYI CCCAGC 4 cut(s) 1829, 3432, 3436, 4063
BsgI GTGCAG 1 cut(s) 1929
BshFI GGCC 9 cut(s) 6, 836, 855, 1182, 1808, 2397, 2747, 3066, 3677
BshNI GGYRCC 3 cut(s) 1910, 3480, 4361
BshTI ACCGGT 1 cut(s) 329
BsiHKAI GWGCWC 4 cut(s) 322, 3049, 3195, 3235
BsiHKCI CYCGRG 3 cut(s) 50, 2199, 3351
BsiSI CCGG 9 cut(s) 330, 833, 1681, 2296, 2735, 2793, 3478, 3485, 3751
BslFI GGGAC 4 cut(s) 938, 1008, 2775, 3951
BsmAI GTCTC 4 cut(s) 1958, 2544, 3729, 4307
BsmFI GGGAC 4 cut(s) 938, 1008, 2775, 3951
BsmI GAATGC 5 cut(s) 190, 1475, 2015, 2335, 3418
BsnI GGCC 9 cut(s) 6, 836, 855, 1182, 1808, 2397, 2747, 3066, 3677
BsoBI CYCGRG 3 cut(s) 50, 2199, 3351
Bsp120I GGGCCC 1 cut(s) 3675
Bsp1286I GDGCHC 5 cut(s) 322, 3049, 3195, 3235, 3679
Bsp1407I TGTACA 1 cut(s) 4195
Bsp1720I GCTNAGC 1 cut(s) 3687
Bsp19I CCATGG 1 cut(s) 1350
BspACI CCGC 6 cut(s) 128, 622, 1796, 2248, 3647, 3958
BspANI GGCC 9 cut(s) 6, 836, 855, 1182, 1808, 2397, 2747, 3066, 3677
BspHI TCATGA 2 cut(s) 933, 1870
BspMAI CTGCAG 2 cut(s) 1376, 3330
BspOI GCTAGC 1 cut(s) 2597
BspQI GCTCTTC 1 cut(s) 2079
BspT107I GGYRCC 3 cut(s) 1910, 3480, 4361
BspTI CTTAAG 1 cut(s) 2707
BsrDI GCAATG 1 cut(s) 4257
BsrFI RCCGGY 2 cut(s) 329, 2295
BsrGI TGTACA 1 cut(s) 4195
BsrI ACTGG 7 cut(s) 202, 319, 904, 1595, 1755, 2748, 4399
BssAI RCCGGY 2 cut(s) 329, 2295
BssECI CCNNGG 7 cut(s) 51, 1071, 1350, 1762, 2145, 2849, 4278
BssNAI GTATAC 1 cut(s) 1614
BssNI GRCGYC 1 cut(s) 2288
BssSI CACGAG 3 cut(s) 2739, 3042, 3600
BssT1I CCWWGG 4 cut(s) 1071, 1350, 1762, 2849
Bst1107I GTATAC 1 cut(s) 1614
Bst2BI CACGAG 3 cut(s) 2739, 3042, 3600
Bst2UI CCWGG 4 cut(s) 1980, 2366, 2522, 3697
Bst4CI ACNGT 9 cut(s) 59, 724, 1649, 1733, 2632, 2638, 3220, 3516, 3882
Bst6I CTCTTC 6 cut(s) 396, 512, 1602, 2079, 2439, 3864
BstACI GRCGYC 1 cut(s) 2288
BstAFI CTTAAG 1 cut(s) 2707
BstAUI TGTACA 1 cut(s) 4195
BstDSI CCRYGG 1 cut(s) 1350
BstENI CCTNNNNNAGG 1 cut(s) 2838
BstH2I RGCGCY 1 cut(s) 4209
BstHHI GCGC 5 cut(s) 1251, 2955, 3447, 3632, 4208
BstMAI GTCTC 4 cut(s) 1958, 2544, 3729, 4307
BstNI CCWGG 4 cut(s) 1980, 2366, 2522, 3697
BstNSI RCATGY 6 cut(s) 96, 554, 576, 2463, 2502, 4250
BstPAI GACNNNNGTC 1 cut(s) 2787
BstSCI CCNGG 7 cut(s) 1978, 2364, 2520, 2791, 3476, 3483, 3695
BstSFI CTRYAG 5 cut(s) 561, 1092, 1372, 1645, 3326
BstSLI GKGCMC 2 cut(s) 322, 3679
BstV1I GCAGC 9 cut(s) 631, 1230, 1348, 2056, 2395, 2768, 2929, 3046, 3340
BstV2I GAAGAC 2 cut(s) 1491, 2720
BstX2I RGATCY 6 cut(s) 1028, 1106, 2244, 2855, 3428, 3852
BstXI CCANNNNNNTGG 1 cut(s) 2298
BstYI RGATCY 6 cut(s) 1028, 1106, 2244, 2855, 3428, 3852
BstZ17I GTATAC 1 cut(s) 1614
Bsu36I CCTNAGG 2 cut(s) 850, 3093
BsuI GTATCC 1 cut(s) 1933
BsuRI GGCC 9 cut(s) 6, 836, 855, 1182, 1808, 2397, 2747, 3066, 3677
BtgI CCRYGG 1 cut(s) 1350
BtsI GCAGTG 4 cut(s) 1824, 1946, 2194, 3323
CaiI CAGNNNCTG 1 cut(s) 3766
CciI TCATGA 2 cut(s) 933, 1870
CfoI GCGC 5 cut(s) 1251, 2955, 3447, 3632, 4208
Cfr10I RCCGGY 2 cut(s) 329, 2295
Cfr13I GGNCC 9 cut(s) 4, 1022, 2368, 2396, 2789, 3675, 3676, 3784, 4135
CseI GACGC 2 cut(s) 2296, 3371
Csp6I GTAC 9 cut(s) 479, 1402, 1690, 1822, 1911, 2844, 4142, 4196, 4362
CspAI ACCGGT 1 cut(s) 329
CviQI GTAC 9 cut(s) 479, 1402, 1690, 1822, 1911, 2844, 4142, 4196, 4362
DraI TTTAAA 3 cut(s) 210, 2565, 4182
EaeI YGGCCR 2 cut(s) 2745, 3064
Eam1104I CTCTTC 6 cut(s) 396, 512, 1602, 2079, 2439, 3864
EarI CTCTTC 6 cut(s) 396, 512, 1602, 2079, 2439, 3864
Eco130I CCWWGG 4 cut(s) 1071, 1350, 1762, 2849
Eco147I AGGCCT 1 cut(s) 855
Eco24I GRGCYC 1 cut(s) 3679
Eco47I GGWCC 5 cut(s) 1022, 2368, 2789, 3784, 4135
Eco47III AGCGCT 1 cut(s) 4207
Eco57I CTGAAG 4 cut(s) 479, 2945, 4115, 4175
Eco81I CCTNAGG 2 cut(s) 850, 3093
Eco88I CYCGRG 3 cut(s) 50, 2199, 3351
EcoNI CCTNNNNNAGG 1 cut(s) 2838
EcoO109I RGGNCCY 3 cut(s) 1022, 2396, 2789
EcoRI GAATTC 2 cut(s) 841, 2204
EcoRII CCWGG 4 cut(s) 1978, 2364, 2520, 3695
EcoT14I CCWWGG 4 cut(s) 1071, 1350, 1762, 2849
EcoT22I ATGCAT 3 cut(s) 98, 645, 2465
EcoT38I GRGCYC 1 cut(s) 3679
ErhI CCWWGG 4 cut(s) 1071, 1350, 1762, 2849
FalI AAGNNNNNCTT 6 cut(s) 215, 247, 3960, 3992, 4148, 4180
FaqI GGGAC 4 cut(s) 938, 1008, 2775, 3951
FauI CCCGC 1 cut(s) 3640
FauNDI CATATG 2 cut(s) 946, 1011
FbaI TGATCA 3 cut(s) 178, 2428, 4291
FblI GTMKAC 1 cut(s) 1613
Fnu4HI GCNGC 9 cut(s) 620, 1219, 1337, 2070, 2409, 2757, 2943, 3060, 3329
FriOI GRGCYC 1 cut(s) 3679
Fsp4HI GCNGC 9 cut(s) 620, 1219, 1337, 2070, 2409, 2757, 2943, 3060, 3329
FspAI RTGCGCAY 1 cut(s) 3631
FspBI CTAG 8 cut(s) 435, 857, 2054, 2594, 2619, 2850, 4211, 4343
FspI TGCGCA 2 cut(s) 1250, 3631
GlaI GCGC 5 cut(s) 1250, 2954, 3446, 3631, 4207
GluI GCNGC 9 cut(s) 620, 1219, 1337, 2070, 2409, 2757, 2943, 3060, 3329
GsaI CCCAGC 4 cut(s) 1833, 3436, 3440, 4067
GsuI CTGGAG 6 cut(s) 206, 263, 1578, 1772, 2001, 2241
HaeII RGCGCY 1 cut(s) 4209
HaeIII GGCC 9 cut(s) 6, 836, 855, 1182, 1808, 2397, 2747, 3066, 3677
HapII CCGG 9 cut(s) 330, 833, 1681, 2296, 2735, 2793, 3478, 3485, 3751
HgaI GACGC 2 cut(s) 2296, 3371
HhaI GCGC 5 cut(s) 1251, 2955, 3447, 3632, 4208
Hin1I GRCGYC 1 cut(s) 2288
Hin6I GCGC 5 cut(s) 1249, 2953, 3445, 3630, 4206
HinP1I GCGC 5 cut(s) 1249, 2953, 3445, 3630, 4206
HincII GTYRAC 3 cut(s) 815, 1366, 3216
HindII GTYRAC 3 cut(s) 815, 1366, 3216
HindIII AAGCTT 3 cut(s) 2720, 3341, 4127
HpaII CCGG 9 cut(s) 330, 833, 1681, 2296, 2735, 2793, 3478, 3485, 3751
Hpy166II GTNNAC 8 cut(s) 320, 815, 1366, 1614, 1824, 2452, 2553, 3216
Hpy8I GTNNAC 8 cut(s) 320, 815, 1366, 1614, 1824, 2452, 2553, 3216
HpyAV CCTTC 8 cut(s) 898, 1695, 2844, 2969, 3238, 3943, 3962, 4090
HpyCH4III ACNGT 9 cut(s) 59, 724, 1649, 1733, 2632, 2638, 3220, 3516, 3882
HpyCH4IV ACGT 2 cut(s) 160, 697
HpySE526I ACGT 2 cut(s) 160, 697
Hsp92I GRCGYC 1 cut(s) 2288
HspAI GCGC 5 cut(s) 1249, 2953, 3445, 3630, 4206
KflI GGGWCCC 1 cut(s) 1022
KpnI GGTACC 2 cut(s) 1914, 4365
Ksp22I TGATCA 3 cut(s) 178, 2428, 4291
LguI GCTCTTC 1 cut(s) 2079
LmnI GCTCC 8 cut(s) 187, 1322, 1715, 2338, 2908, 4203, 4231, 4267
Lsp1109I GCAGC 9 cut(s) 631, 1230, 1348, 2056, 2395, 2768, 2929, 3046, 3340
MaeI CTAG 8 cut(s) 435, 857, 2054, 2594, 2619, 2850, 4211, 4343
MaeII ACGT 2 cut(s) 160, 697
MaeIII GTNAC 9 cut(s) 451, 632, 724, 1418, 1733, 2632, 3030, 3321, 3876
MfeI CAATTG 5 cut(s) 36, 776, 1486, 2403, 2646
MflI RGATCY 6 cut(s) 1028, 1106, 2244, 2855, 3428, 3852
MhlI GDGCHC 5 cut(s) 322, 3049, 3195, 3235, 3679
MlsI TGGCCA 1 cut(s) 2747
MluNI TGGCCA 1 cut(s) 2747
MlyI GAGTC 3 cut(s) 960, 2774, 3506
MmeI TCCRAC 4 cut(s) 285, 2663, 4289, 4397
Mox20I TGGCCA 1 cut(s) 2747
Mph1103I ATGCAT 3 cut(s) 98, 645, 2465
MroXI GAANNNNTTC 3 cut(s) 972, 1158, 1385
MscI TGGCCA 1 cut(s) 2747
MslI CAYNNNNRTG 4 cut(s) 91, 563, 2178, 4097
Msp20I TGGCCA 1 cut(s) 2747
MspA1I CMGCKG 4 cut(s) 184, 622, 2759, 3436
MspCI CTTAAG 1 cut(s) 2707
MspI CCGG 9 cut(s) 330, 833, 1681, 2296, 2735, 2793, 3478, 3485, 3751
MspR9I CCNGG 7 cut(s) 1980, 2366, 2522, 2793, 3478, 3485, 3697
MunI CAATTG 5 cut(s) 36, 776, 1486, 2403, 2646
Mva1269I GAATGC 5 cut(s) 190, 1475, 2015, 2335, 3418
MvaI CCWGG 4 cut(s) 1980, 2366, 2522, 3697
NciI CCSGG 3 cut(s) 2793, 3478, 3485
NcoI CCATGG 1 cut(s) 1350
NdeI CATATG 2 cut(s) 946, 1011
NheI GCTAGC 1 cut(s) 2593
NmeAIII GCCGAG 1 cut(s) 2937
NmuCI GTSAC 7 cut(s) 451, 632, 724, 1418, 1733, 2632, 3321
NsbI TGCGCA 2 cut(s) 1250, 3631
NsiI ATGCAT 3 cut(s) 98, 645, 2465
NspI RCATGY 6 cut(s) 96, 554, 576, 2463, 2502, 4250
OliI CACNNNNGTG 1 cut(s) 563
PaeI GCATGC 2 cut(s) 96, 2502
PaeR7I CTCGAG 1 cut(s) 2199
PagI TCATGA 2 cut(s) 933, 1870
PceI AGGCCT 1 cut(s) 855
PciI ACATGT 2 cut(s) 572, 4246
PciSI GCTCTTC 1 cut(s) 2079
PcsI WCGNNNNNNNCGW 1 cut(s) 3369
PctI GAATGC 5 cut(s) 190, 1475, 2015, 2335, 3418
PdmI GAANNNNTTC 3 cut(s) 972, 1158, 1385
PfoI TCCNGGA 2 cut(s) 2520, 2791
PinAI ACCGGT 1 cut(s) 329
PkrI GCNGC 9 cut(s) 621, 1220, 1338, 2071, 2410, 2758, 2944, 3061, 3330
PleI GAGTC 3 cut(s) 959, 2773, 3505
PpsI GAGTC 3 cut(s) 959, 2773, 3505
PpuMI RGGWCCY 2 cut(s) 1022, 2789
PscI ACATGT 2 cut(s) 572, 4246
PshAI GACNNNNGTC 1 cut(s) 2787
PshBI ATTAAT 1 cut(s) 1083
PsiI TTATAA 1 cut(s) 354
Psp5II RGGWCCY 2 cut(s) 1022, 2789
Psp6I CCWGG 4 cut(s) 1978, 2364, 2520, 3695
PspFI CCCAGC 4 cut(s) 1829, 3432, 3436, 4063
PspGI CCWGG 4 cut(s) 1978, 2364, 2520, 3695
PspOMI GGGCCC 1 cut(s) 3675
PspPI GGNCC 9 cut(s) 4, 1022, 2368, 2396, 2789, 3675, 3676, 3784, 4135
PspPPI RGGWCCY 2 cut(s) 1022, 2789
PsrI GAACNNNNNNTAC 2 cut(s) 1248, 1280
PstI CTGCAG 2 cut(s) 1376, 3330
PstNI CAGNNNCTG 1 cut(s) 3766
PsuI RGATCY 6 cut(s) 1028, 1106, 2244, 2855, 3428, 3852
PvuII CAGCTG 3 cut(s) 184, 2759, 3436
RsaI GTAC 9 cut(s) 480, 1403, 1691, 1823, 1912, 2845, 4143, 4197, 4363
RsaNI GTAC 9 cut(s) 479, 1402, 1690, 1822, 1911, 2844, 4142, 4196, 4362
RseI CAYNNNNRTG 4 cut(s) 91, 563, 2178, 4097
SapI GCTCTTC 1 cut(s) 2079
SatI GCNGC 9 cut(s) 620, 1219, 1337, 2070, 2409, 2757, 2943, 3060, 3329
Sau96I GGNCC 9 cut(s) 4, 1022, 2368, 2396, 2789, 3675, 3676, 3784, 4135
SchI GAGTC 3 cut(s) 960, 2774, 3506
ScrFI CCNGG 7 cut(s) 1980, 2366, 2522, 2793, 3478, 3485, 3697
SduI GDGCHC 5 cut(s) 322, 3049, 3195, 3235, 3679
SfcI CTRYAG 5 cut(s) 561, 1092, 1372, 1645, 3326
Sfr274I CTCGAG 1 cut(s) 2199
SgrAI CRCCGGYG 1 cut(s) 329
SinI GGWCC 5 cut(s) 1022, 2368, 2789, 3784, 4135
SlaI CTCGAG 1 cut(s) 2199
SmiMI CAYNNNNRTG 4 cut(s) 91, 563, 2178, 4097
SmlI CTYRAG 3 cut(s) 1271, 2199, 2707
SmoI CTYRAG 3 cut(s) 1271, 2199, 2707
SpeI ACTAGT 1 cut(s) 434
SphI GCATGC 2 cut(s) 96, 2502
SseBI AGGCCT 1 cut(s) 855
SsiI CCGC 6 cut(s) 128, 622, 1796, 2248, 3647, 3958
SspI AATATT 3 cut(s) 972, 1000, 2692
SspMI CTAG 8 cut(s) 435, 857, 2054, 2594, 2619, 2850, 4211, 4343
StuI AGGCCT 1 cut(s) 855
StyD4I CCNGG 7 cut(s) 1978, 2364, 2520, 2791, 3476, 3483, 3695
StyI CCWWGG 4 cut(s) 1071, 1350, 1762, 2849
TaaI ACNGT 9 cut(s) 59, 724, 1649, 1733, 2632, 2638, 3220, 3516, 3882
TaiI ACGT 2 cut(s) 163, 700
TaqI TCGA 5 cut(s) 839, 1466, 1502, 2200, 4001
TaqII GACCGA 1 cut(s) 2159
TatI WGTACW 2 cut(s) 1689, 4195
TseFI GTSAC 7 cut(s) 451, 632, 724, 1418, 1733, 2632, 3321
TseI GCWGC 9 cut(s) 619, 1218, 1336, 2069, 2408, 2756, 2942, 3059, 3328
Tsp45I GTSAC 7 cut(s) 451, 632, 724, 1418, 1733, 2632, 3321
TspGWI ACGGA 2 cut(s) 379, 569
Vha464I CTTAAG 1 cut(s) 2707
VneI GTGCAC 1 cut(s) 318
VpaK11BI GGWCC 5 cut(s) 1022, 2368, 2789, 3784, 4135
VspI ATTAAT 1 cut(s) 1083
XagI CCTNNNNNAGG 1 cut(s) 2838
XapI RAATTY 7 cut(s) 841, 1043, 1901, 2204, 2809, 4177, 4296
XceI RCATGY 6 cut(s) 96, 554, 576, 2463, 2502, 4250
XcmI CCANNNNNNNNNTGG 2 cut(s) 2362, 3870
XhoI CTCGAG 1 cut(s) 2199
XmaJI CCTAGG 1 cut(s) 2849
XmiI GTMKAC 1 cut(s) 1613
XmnI GAANNNNTTC 3 cut(s) 972, 1158, 1385
XspI CTAG 8 cut(s) 435, 857, 2054, 2594, 2619, 2850, 4211, 4343
Zsp2I ATGCAT 3 cut(s) 98, 645, 2465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.