FvH4_7g26540

Belongs to the Glu Leu Phe Val dehydrogenases family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
20018063 .. 20021087
3025 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g26540.t2

Sequence Viewer

Length: 1236 bp
ATGAACGCCCTCGCCGCAACTAGCCGTAATTTCAGAAACGCCGCCCGGCTTCTTGGGTTGGATGCTAAGATTGAGAAGAGTCTTTTGATTCCTTTCAGGGAGATCAAGGTGGAGTGCACGATTCCCAAGGATGATGGGACATTGGTGTCGTACGTTGGATTTAGGGTGCAGCATGATAATGCACGTGGTCCAATGAAGGGAGGGATCAGATATCATCCTGAGGTTGATCCAGATGAAGTAAATGCCCTGGCTCAACTTATGACATGGAAGACTGCTGTGGCAGACCTTCCATATGGTGGAGCAAAGGGTGGAATTGGATGCACCCCAAGGGAGTTGAGTAAGAGTGAGTTGGAGCGCCTGACTCGCGTCTTTACTCAGAAAATCCATGATCTCATTGGAATTCACACTGATGTTCCTGCACCTGATATGGGAACCAATGCTCAGACTATGGCATGGATTTTGGATGAGTACTCCAAATTTCATGGTCACTCACCAGCTGTTGTCACTGGAAAGCCAATTGATCTTGGAGGTTCTCTAGGCAGGGAGGCTGCAACTGGACGTGGTGTTGTTTTTGCAACAGAAGCTTTGCTAGCAGAACATGGGAAGTCAGTGAAGGGCTTGACTTTTGTTATTCAGGGTTTTGGAAATGTGGGATCCTGGGCAGCACAGTTCTTGCACGAGAAAGGCGGAAAGGTTGTTGCTGTTAGTGACATCACTGGTGCAATTTCAAACCCAAATGGACTAGATATTCCAGCGTTGGTTAAGCATAAAGAGGACACTGGGAGTTTGTTAAACTTCAGTGGTGGAGATGTCATGAACCCCAATGAACTGCTTATACAGGAATGTGATGTTCTCATCCCTTCTGCTTTGGGTGGAGTTCTCAACAGGGAAAATGCTTCATCAGTGAGAGCCAAGTTCATAATTGAGGCAGCAAATCATCCTACTGATCCGGAAGCAGATGAGATTTTATCTAAGAAAGGAGTTATCATCCTCCCTGATATATATGCAAATGCTGGTGGTGTGACTGTCAGCTACTTTGAGTGGGTTCAGAATATTCAAGGTTTCATGTGGGATGAAGAGAAGGTGAATAACGAGCTTCACAGGTACATGAATAAGGCATTCCAGGATATCAAGAACATGTGCAAGACTCACGATTGTAATCTCAGAATGGGTGCCTTCACATTGGGTGTGAACCGGGTAGCACGCGCAACTCTCTTGAGGGGTTGGGAAGCATGA

Protein Analysis

412

Amino Acids

44.61

Weight (kDa)

6.2

Isoelectric Point (pI)

23.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELFV_dehydrog_N PF02812 1 - 95 4.4e-39 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ELFV_dehydrog PF00208 112 - 344 1.8e-82 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 145
AccB1I GGYRCC 1 cut(s) 1172
AccB7I CCANNNNNTGG 1 cut(s) 296
AccII CGCG 2 cut(s) 366, 1206
AccIII TCCGGA 1 cut(s) 949
AciI CCGC 3 cut(s) 15, 42, 687
AclWI GGATC 5 cut(s) 212, 221, 648, 661, 941
AcsI RAATTY 2 cut(s) 399, 476
AcuI CTGAAG 1 cut(s) 781
AcvI CACGTG 1 cut(s) 185
AfaI GTAC 3 cut(s) 152, 470, 1106
AfiI CCNNNNNNNGG 3 cut(s) 197, 296, 428
AflIII ACRYGT 1 cut(s) 1137
AgsI TTSAA 2 cut(s) 729, 1058
AjiI CACGTC 1 cut(s) 560
AjnI CCWGG 3 cut(s) 246, 656, 1122
AluBI AGCT 4 cut(s) 497, 584, 1032, 1096
AluI AGCT 4 cut(s) 497, 584, 1032, 1096
Alw21I GWGCWC 1 cut(s) 119
Alw44I GTGCAC 1 cut(s) 115
AlwI GGATC 5 cut(s) 212, 221, 648, 661, 941
Aor13HI TCCGGA 1 cut(s) 949
ApaLI GTGCAC 1 cut(s) 115
ApeKI GCWGC 4 cut(s) 169, 548, 662, 929
ApoI RAATTY 2 cut(s) 399, 476
AspLEI GCGC 2 cut(s) 357, 1208
AspS9I GGNCC 1 cut(s) 188
AsuC2I CCSGG 2 cut(s) 46, 1196
AsuHPI GGTGA 2 cut(s) 483, 1096
AsuNHI GCTAGC 1 cut(s) 589
AvaII GGWCC 1 cut(s) 188
AxyI CCTNAGG 1 cut(s) 219
BaeGI GKGCMC 1 cut(s) 119
BamHI GGATCC 1 cut(s) 653
BanI GGYRCC 1 cut(s) 1172
BauI CACGAG 1 cut(s) 677
BbrPI CACGTG 1 cut(s) 185
BbsI GAAGAC 1 cut(s) 275
Bbv12I GWGCWC 1 cut(s) 119
BbvI GCAGC 4 cut(s) 181, 535, 674, 941
BccI CCATC 1 cut(s) 128
BceAI ACGGC 1 cut(s) 9
BciT130I CCWGG 3 cut(s) 248, 658, 1124
BcnI CCSGG 2 cut(s) 46, 1196
BfaI CTAG 4 cut(s) 21, 536, 590, 743
BfoI RGCGCY 1 cut(s) 358
BisI GCNGC 6 cut(s) 15, 42, 170, 549, 663, 930
BlsI GCNGC 6 cut(s) 16, 43, 171, 550, 664, 931
BmcAI AGTACT 1 cut(s) 470
Bme1390I CCNGG 5 cut(s) 46, 248, 658, 1124, 1196
Bme18I GGWCC 1 cut(s) 188
BmgBI CACGTC 1 cut(s) 560
BmgT120I GGNCC 1 cut(s) 188
BmiI GGNNCC 3 cut(s) 433, 655, 1174
BmrFI CCNGG 5 cut(s) 46, 248, 658, 1124, 1196
BmrI ACTGGG 1 cut(s) 789
BmsI GCATC 2 cut(s) 52, 308
BmtI GCTAGC 1 cut(s) 593
BmuI ACTGGG 1 cut(s) 789
BoxI GACNNNNGTC 1 cut(s) 365
BpiI GAAGAC 1 cut(s) 275
BpuMI CCSGG 2 cut(s) 46, 1196
BsaAI YACGTR 1 cut(s) 185
BsaBI GATNNNNATC 1 cut(s) 1158
BsaJI CCNNGG 4 cut(s) 126, 246, 326, 657
BsaWI WCCGGW 1 cut(s) 949
Bsc4I CCNNNNNNNGG 3 cut(s) 197, 296, 428
Bse1I ACTGG 4 cut(s) 511, 559, 721, 784
Bse21I CCTNAGG 1 cut(s) 219
Bse8I GATNNNNATC 1 cut(s) 1158
BseAI TCCGGA 1 cut(s) 949
BseBI CCWGG 3 cut(s) 248, 658, 1124
BseDI CCNNGG 4 cut(s) 126, 246, 326, 657
BseGI GGATG 9 cut(s) 67, 136, 214, 323, 469, 855, 937, 987, 1078
BseJI GATNNNNATC 1 cut(s) 1158
BseLI CCNNNNNNNGG 3 cut(s) 197, 296, 428
BseMII CTCAG 4 cut(s) 210, 389, 455, 1177
BseNI ACTGG 4 cut(s) 511, 559, 721, 784
BseSI GKGCMC 1 cut(s) 119
BseXI GCAGC 4 cut(s) 181, 535, 674, 941
BsgI GTGCAG 2 cut(s) 188, 402
Bsh1236I CGCG 2 cut(s) 366, 1206
BshNI GGYRCC 1 cut(s) 1172
BsiHKAI GWGCWC 1 cut(s) 119
BsiSI CCGG 3 cut(s) 46, 950, 1195
BsiWI CGTACG 1 cut(s) 150
BslFI GGGAC 1 cut(s) 151
BslI CCNNNNNNNGG 3 cut(s) 197, 296, 428
BsmFI GGGAC 1 cut(s) 151
BsmI GAATGC 1 cut(s) 1118
Bsp1286I GDGCHC 1 cut(s) 119
Bsp13I TCCGGA 1 cut(s) 949
Bsp143I GATC 7 cut(s) 102, 204, 226, 388, 520, 653, 946
BspACI CCGC 3 cut(s) 15, 42, 687
BspCNI CTCAG 4 cut(s) 211, 388, 454, 1176
BspEI TCCGGA 1 cut(s) 949
BspFNI CGCG 2 cut(s) 366, 1206
BspHI TCATGA 1 cut(s) 813
BspLI GGNNCC 3 cut(s) 433, 655, 1174
BspOI GCTAGC 1 cut(s) 593
BspPI GGATC 5 cut(s) 212, 221, 648, 661, 941
BspT107I GGYRCC 1 cut(s) 1172
BsrI ACTGG 4 cut(s) 511, 559, 721, 784
BssECI CCNNGG 4 cut(s) 126, 246, 326, 657
BssMI GATC 7 cut(s) 102, 204, 226, 388, 520, 653, 946
BssSI CACGAG 1 cut(s) 677
BssT1I CCWWGG 2 cut(s) 126, 326
Bst2BI CACGAG 1 cut(s) 677
Bst2UI CCWGG 3 cut(s) 248, 658, 1124
Bst4CI ACNGT 2 cut(s) 669, 1027
Bst6I CTCTTC 2 cut(s) 71, 1071
BstBAI YACGTR 1 cut(s) 185
BstC8I GCNNGC 2 cut(s) 591, 1204
BstDEI CTNAG 6 cut(s) 66, 219, 375, 441, 972, 1163
BstF5I GGATG 9 cut(s) 67, 136, 214, 323, 469, 855, 937, 987, 1078
BstFNI CGCG 2 cut(s) 366, 1206
BstH2I RGCGCY 1 cut(s) 358
BstHHI GCGC 2 cut(s) 357, 1208
BstKTI GATC 7 cut(s) 105, 207, 229, 391, 523, 656, 949
BstMBI GATC 7 cut(s) 102, 204, 226, 388, 520, 653, 946
BstMWI GCNNNNNNNGC 4 cut(s) 14, 363, 581, 590
BstNI CCWGG 3 cut(s) 248, 658, 1124
BstNSI RCATGY 1 cut(s) 1141
BstPAI GACNNNNGTC 1 cut(s) 365
BstSCI CCNGG 5 cut(s) 44, 246, 656, 1122, 1194
BstSLI GKGCMC 1 cut(s) 119
BstUI CGCG 2 cut(s) 366, 1206
BstV1I GCAGC 4 cut(s) 181, 535, 674, 941
BstV2I GAAGAC 1 cut(s) 275
BstX2I RGATCY 1 cut(s) 653
BstYI RGATCY 1 cut(s) 653
Bsu36I CCTNAGG 1 cut(s) 219
BtrI CACGTC 1 cut(s) 560
BtsCI GGATG 9 cut(s) 67, 136, 214, 323, 469, 855, 937, 987, 1078
BtsIMutI CAGTG 7 cut(s) 405, 504, 615, 714, 777, 805, 909
Cac8I GCNNGC 2 cut(s) 591, 1204
CciI TCATGA 1 cut(s) 813
CfoI GCGC 2 cut(s) 357, 1208
Cfr13I GGNCC 1 cut(s) 188
CseI GACGC 1 cut(s) 355
Csp6I GTAC 3 cut(s) 151, 469, 1105
CviQI GTAC 3 cut(s) 151, 469, 1105
DdeI CTNAG 6 cut(s) 66, 219, 375, 441, 972, 1163
DpnI GATC 7 cut(s) 104, 206, 228, 390, 522, 655, 948
DpnII GATC 7 cut(s) 102, 204, 226, 388, 520, 653, 946
DrdI GACNNNNNNGTC 1 cut(s) 145
DseDI GACNNNNNNGTC 1 cut(s) 145
Eam1104I CTCTTC 2 cut(s) 71, 1071
EarI CTCTTC 2 cut(s) 71, 1071
EciI GGCGGA 1 cut(s) 702
Eco130I CCWWGG 2 cut(s) 126, 326
Eco32I GATATC 2 cut(s) 212, 1129
Eco47I GGWCC 1 cut(s) 188
Eco57I CTGAAG 1 cut(s) 781
Eco72I CACGTG 1 cut(s) 185
Eco81I CCTNAGG 1 cut(s) 219
EcoRI GAATTC 1 cut(s) 399
EcoRII CCWGG 3 cut(s) 246, 656, 1122
EcoRV GATATC 2 cut(s) 212, 1129
EcoT14I CCWWGG 2 cut(s) 126, 326
ErhI CCWWGG 2 cut(s) 126, 326
FaqI GGGAC 1 cut(s) 151
FauNDI CATATG 1 cut(s) 292
Fnu4HI GCNGC 6 cut(s) 15, 42, 170, 549, 663, 930
FokI GGATG 9 cut(s) 74, 143, 201, 330, 476, 842, 924, 974, 1085
Fsp4HI GCNGC 6 cut(s) 15, 42, 170, 549, 663, 930
FspBI CTAG 4 cut(s) 21, 536, 590, 743
GlaI GCGC 2 cut(s) 356, 1207
GluI GCNGC 6 cut(s) 15, 42, 170, 549, 663, 930
HaeII RGCGCY 1 cut(s) 358
HapII CCGG 3 cut(s) 46, 950, 1195
HgaI GACGC 1 cut(s) 355
HhaI GCGC 2 cut(s) 357, 1208
Hin6I GCGC 2 cut(s) 355, 1206
HinP1I GCGC 2 cut(s) 355, 1206
HindIII AAGCTT 1 cut(s) 582
HinfI GANTC 5 cut(s) 79, 88, 121, 361, 1147
HpaII CCGG 3 cut(s) 46, 950, 1195
HphI GGTGA 2 cut(s) 483, 1096
Hpy166II GTNNAC 2 cut(s) 117, 1192
Hpy188I TCNGA 6 cut(s) 35, 209, 378, 444, 1050, 1166
Hpy188III TCNNGA 7 cut(s) 218, 230, 814, 950, 1132, 1151, 1216
Hpy8I GTNNAC 2 cut(s) 117, 1192
HpyAV CCTTC 6 cut(s) 190, 296, 607, 870, 1075, 1186
HpyCH4III ACNGT 2 cut(s) 669, 1027
HpyCH4IV ACGT 3 cut(s) 153, 184, 559
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 363, 581, 590
HpyF3I CTNAG 6 cut(s) 66, 219, 375, 441, 972, 1163
HpySE526I ACGT 3 cut(s) 153, 184, 559
HspAI GCGC 2 cut(s) 355, 1206
Kpn2I TCCGGA 1 cut(s) 949
Kzo9I GATC 7 cut(s) 102, 204, 226, 388, 520, 653, 946
LmnI GCTCC 2 cut(s) 299, 352
Lsp1109I GCAGC 4 cut(s) 181, 535, 674, 941
LweI GCATC 2 cut(s) 52, 308
MaeI CTAG 4 cut(s) 21, 536, 590, 743
MaeII ACGT 3 cut(s) 153, 184, 559
MaeIII GTNAC 4 cut(s) 485, 502, 707, 1021
MalI GATC 7 cut(s) 104, 206, 228, 390, 522, 655, 948
MboI GATC 7 cut(s) 102, 204, 226, 388, 520, 653, 946
MboII GAAGA 3 cut(s) 88, 280, 1088
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 1 cut(s) 653
MhlI GDGCHC 1 cut(s) 119
MluCI AATT 7 cut(s) 28, 312, 399, 476, 516, 723, 921
MlyI GAGTC 3 cut(s) 88, 355, 1141
MmeI TCCRAC 3 cut(s) 39, 136, 330
MnlI CCTC 9 cut(s) 20, 194, 214, 521, 538, 766, 919, 1001, 1212
MroI TCCGGA 1 cut(s) 949
MseI TTAA 2 cut(s) 762, 791
MslI CAYNNNNRTG 2 cut(s) 177, 408
MspA1I CMGCKG 1 cut(s) 497
MspI CCGG 3 cut(s) 46, 950, 1195
MspR9I CCNGG 5 cut(s) 46, 248, 658, 1124, 1196
MunI CAATTG 1 cut(s) 516
Mva1269I GAATGC 1 cut(s) 1118
MvaI CCWGG 3 cut(s) 248, 658, 1124
MvnI CGCG 2 cut(s) 366, 1206
MwoI GCNNNNNNNGC 4 cut(s) 14, 363, 581, 590
NciI CCSGG 2 cut(s) 46, 1196
NdeI CATATG 1 cut(s) 292
NdeII GATC 7 cut(s) 102, 204, 226, 388, 520, 653, 946
NheI GCTAGC 1 cut(s) 589
NlaIV GGNNCC 3 cut(s) 433, 655, 1174
NmuCI GTSAC 4 cut(s) 485, 502, 707, 1021
NspI RCATGY 1 cut(s) 1141
PagI TCATGA 1 cut(s) 813
PciI ACATGT 1 cut(s) 1137
PctI GAATGC 1 cut(s) 1118
PfeI GAWTC 2 cut(s) 88, 121
Pfl23II CGTACG 1 cut(s) 150
PflMI CCANNNNNTGG 1 cut(s) 296
PfoI TCCNGGA 1 cut(s) 1122
PkrI GCNGC 6 cut(s) 16, 43, 171, 550, 664, 931
PleI GAGTC 3 cut(s) 87, 355, 1141
PmaCI CACGTG 1 cut(s) 185
PmlI CACGTG 1 cut(s) 185
PpsI GAGTC 3 cut(s) 87, 355, 1141
Ppu21I YACGTR 1 cut(s) 185
PscI ACATGT 1 cut(s) 1137
PshAI GACNNNNGTC 1 cut(s) 365
Psp6I CCWGG 3 cut(s) 246, 656, 1122
PspCI CACGTG 1 cut(s) 185
PspGI CCWGG 3 cut(s) 246, 656, 1122
PspLI CGTACG 1 cut(s) 150
PspN4I GGNNCC 3 cut(s) 433, 655, 1174
PspPI GGNCC 1 cut(s) 188
PsrI GAACNNNNNNTAC 2 cut(s) 819, 851
PsuI RGATCY 1 cut(s) 653
PvuII CAGCTG 1 cut(s) 497
RsaI GTAC 3 cut(s) 152, 470, 1106
RsaNI GTAC 3 cut(s) 151, 469, 1105
RseI CAYNNNNRTG 2 cut(s) 177, 408
SaqAI TTAA 2 cut(s) 762, 791
SatI GCNGC 6 cut(s) 15, 42, 170, 549, 663, 930
Sau3AI GATC 7 cut(s) 102, 204, 226, 388, 520, 653, 946
Sau96I GGNCC 1 cut(s) 188
ScaI AGTACT 1 cut(s) 470
SchI GAGTC 3 cut(s) 88, 355, 1141
ScrFI CCNGG 5 cut(s) 46, 248, 658, 1124, 1196
SduI GDGCHC 1 cut(s) 119
SfaNI GCATC 2 cut(s) 52, 308
SinI GGWCC 1 cut(s) 188
SmiMI CAYNNNNRTG 2 cut(s) 177, 408
SmlI CTYRAG 1 cut(s) 1216
SmoI CTYRAG 1 cut(s) 1216
Sse9I AATT 7 cut(s) 28, 312, 399, 476, 516, 723, 921
SsiI CCGC 3 cut(s) 15, 42, 687
SspI AATATT 1 cut(s) 1054
SspMI CTAG 4 cut(s) 21, 536, 590, 743
StyD4I CCNGG 5 cut(s) 44, 246, 656, 1122, 1194
StyI CCWWGG 2 cut(s) 126, 326
TaaI ACNGT 2 cut(s) 669, 1027
TaiI ACGT 3 cut(s) 156, 187, 562
TasI AATT 7 cut(s) 28, 312, 399, 476, 516, 723, 921
TatI WGTACW 1 cut(s) 468
TauI GCSGC 2 cut(s) 17, 44
TfiI GAWTC 2 cut(s) 88, 121
Tru1I TTAA 2 cut(s) 762, 791
Tru9I TTAA 2 cut(s) 762, 791
TscAI CASTG 7 cut(s) 412, 511, 615, 721, 784, 805, 909
TseFI GTSAC 4 cut(s) 485, 502, 707, 1021
TseI GCWGC 4 cut(s) 169, 548, 662, 929
Tsp45I GTSAC 4 cut(s) 485, 502, 707, 1021
TspRI CASTG 7 cut(s) 412, 511, 615, 721, 784, 805, 909
Van91I CCANNNNNTGG 1 cut(s) 296
VneI GTGCAC 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 188
XapI RAATTY 2 cut(s) 399, 476
XceI RCATGY 1 cut(s) 1141
XcmI CCANNNNNNNNNTGG 1 cut(s) 392
XspI CTAG 4 cut(s) 21, 536, 590, 743
ZrmI AGTACT 1 cut(s) 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.