MD07G1241100.v1.1

Belongs to the Glu Leu Phe Val dehydrogenases family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
31222474 .. 31224993
2520 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1241100.v1.1.491

Sequence Viewer

Length: 1236 bp
ATGAATGCCCTCGCTGCAACGAGCCGCAATTTTAAAAACGCTGCGCGTATTCTCGGACTCGATGCTAAGATTGAGACGAGTCTCTTGATCCCCTTCAGAGAGATCAAGGTGGAGTGCACGATTCCCAAGGACGATGGAAGCTTGGTGTCGTACGTTGGATTCAGAGTGCAGCATGATAATGCACGTGGACCAATGAAGGGAGGGATTAGATATCATCCTGAGGTTGATCCGGATGAAGTGAATGCCCTGGCTCAACTCATGACCTGGAAGACTGCTGTGGTCGACATTCCATATGGTGGAGCCAAGGGTGGAATAGGATGCACCCCCAGGGACTTGAGTTTAAGCGAGTTGGAGCGTCTGACTCGCGTCTTCGCTCAGAAAATCCATGATCTCATTGGAACTCATACTGATGTTCCCGCACCCGATATGGGCACCAATGCTCAGACCATGGCATGGATGTTGGATGAGTACTCCAAATTTCATGGTCACTCACCGGCTGTTGTCACTGGAAAGCCAATCGATCTTGGGGGATCACTAGGTAGGGAGGCTGCAACTGGACGCGGTGTCGTTTTTGCAACAGAAGCTTTACTTGCAGAATATGGGAAGTCATGCAAAGGCTTGACTTTTGTTATTCAGGGTTTCGGAAACGTGGGATCCTGGGCAGCAAGGCTTATACGCGAGAGAGGCGGTAAGGTCATTGCTGTGAGTGACATTACTGGTGCAGTTAAGAACCCGAATGGACTCGATATTGATGAGTTGATTAAGCACAAGGAAAGCACTGGGAGTTTGTTAAATTTCAACGGCGCAGATAACATGGACCCTAATGAGGTACTGATACACGAATGCGATGTTCTCATCCCTTCTGCTTTAGGTGGAGTTCTGAACAGGGAAAATGCTTCATCCGTGAGGGCGAAATTCATCGTCGAGGCAGCAAATCATCCTACCGATCCAGAAGCTGATGAGATATTATCCAAGAAAGGAGTCATAATACTCCCAGACATATATGCAAACGCTGGTGGGGTGACTGTTAGCTACTTTGAGTGGGTTCAGAACATTCAAGGGTTTATGTGGGATGAAGAGAAGGTGAATAACGAGCTTCAAAGGTACATGACTCAGGCGTTTCATAACATCAAGAACATGTGCAAGACCTATGATTGTAATCTCAGAATGGGTGCCTTCACATTGGGTGTAAACCGGGTTGCACGCGCCACCAACTTACGGGGTTATGAAGCATAA

Protein Analysis

412

Amino Acids

44.72

Weight (kDa)

5.97

Isoelectric Point (pI)

22.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELFV_dehydrog_N PF02812 33 - 159 3.9e-50 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ELFV_dehydrog PF00208 176 - 408 4.7e-83 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 431, 1172
AccB7I CCANNNNNTGG 2 cut(s) 296, 453
AccI GTMKAC 1 cut(s) 282
AccII CGCG 5 cut(s) 46, 366, 561, 678, 1206
AccIII TCCGGA 1 cut(s) 229
AciI CCGC 4 cut(s) 25, 417, 561, 687
AclWI GGATC 6 cut(s) 82, 221, 538, 648, 661, 941
AcsI RAATTY 3 cut(s) 476, 793, 914
AcuI CTGAAG 1 cut(s) 79
AcvI CACGTG 1 cut(s) 185
AfaI GTAC 4 cut(s) 152, 470, 831, 1106
AfiI CCNNNNNNNGG 6 cut(s) 197, 296, 428, 453, 826, 1218
AflIII ACRYGT 1 cut(s) 1137
AgsI TTSAA 3 cut(s) 799, 1058, 1100
AhdI GACNNNNNGTC 1 cut(s) 563
AjnI CCWGG 4 cut(s) 246, 263, 326, 656
AluBI AGCT 5 cut(s) 141, 584, 956, 1032, 1096
AluI AGCT 5 cut(s) 141, 584, 956, 1032, 1096
Alw21I GWGCWC 1 cut(s) 119
Alw26I GTCTC 2 cut(s) 68, 86
Alw44I GTGCAC 1 cut(s) 115
AlwI GGATC 6 cut(s) 82, 221, 538, 648, 661, 941
AlwNI CAGNNNCTG 1 cut(s) 956
Aor13HI TCCGGA 1 cut(s) 229
ApaLI GTGCAC 1 cut(s) 115
ApeKI GCWGC 6 cut(s) 14, 41, 169, 548, 662, 929
ApoI RAATTY 3 cut(s) 476, 793, 914
AspLEI GCGC 3 cut(s) 46, 806, 1208
AspS9I GGNCC 2 cut(s) 188, 817
AsuC2I CCSGG 1 cut(s) 1196
AsuHPI GGTGA 3 cut(s) 483, 1033, 1096
AvaII GGWCC 2 cut(s) 188, 817
AxyI CCTNAGG 1 cut(s) 219
BaeGI GKGCMC 2 cut(s) 119, 434
BamHI GGATCC 1 cut(s) 653
BanI GGYRCC 2 cut(s) 431, 1172
BbrPI CACGTG 1 cut(s) 185
BbsI GAAGAC 2 cut(s) 275, 361
Bbv12I GWGCWC 1 cut(s) 119
BbvI GCAGC 5 cut(s) 28, 181, 535, 674, 941
BccI CCATC 1 cut(s) 128
BceAI ACGGC 1 cut(s) 817
BciT130I CCWGG 4 cut(s) 248, 265, 328, 658
BcnI CCSGG 1 cut(s) 1196
BcoDI GTCTC 2 cut(s) 68, 86
BfaI CTAG 1 cut(s) 536
BisI GCNGC 7 cut(s) 15, 25, 42, 170, 549, 663, 930
BlsI GCNGC 7 cut(s) 16, 26, 43, 171, 550, 664, 931
BmcAI AGTACT 1 cut(s) 470
Bme1390I CCNGG 5 cut(s) 248, 265, 328, 658, 1196
Bme18I GGWCC 2 cut(s) 188, 817
BmeRI GACNNNNNGTC 1 cut(s) 563
BmgT120I GGNCC 2 cut(s) 188, 817
BmiI GGNNCC 5 cut(s) 301, 433, 655, 819, 1174
BmrFI CCNGG 5 cut(s) 248, 265, 328, 658, 1196
BmrI ACTGGG 1 cut(s) 789
BmsI GCATC 2 cut(s) 52, 308
BmuI ACTGGG 1 cut(s) 789
BoxI GACNNNNGTC 1 cut(s) 365
BpiI GAAGAC 2 cut(s) 275, 361
BpuEI CTTGAG 1 cut(s) 355
BpuMI CCSGG 1 cut(s) 1196
Bsa29I ATCGAT 1 cut(s) 519
BsaAI YACGTR 1 cut(s) 185
BsaBI GATNNNNATC 1 cut(s) 1158
BsaJI CCNNGG 7 cut(s) 126, 246, 303, 326, 327, 447, 657
BsaWI WCCGGW 1 cut(s) 229
Bsc4I CCNNNNNNNGG 6 cut(s) 197, 296, 428, 453, 826, 1218
Bse118I RCCGGY 1 cut(s) 493
Bse1I ACTGG 4 cut(s) 511, 559, 721, 784
Bse21I CCTNAGG 1 cut(s) 219
Bse3DI GCAATG 1 cut(s) 696
Bse8I GATNNNNATC 1 cut(s) 1158
BseAI TCCGGA 1 cut(s) 229
BseBI CCWGG 4 cut(s) 248, 265, 328, 658
BseCI ATCGAT 1 cut(s) 519
BseDI CCNNGG 7 cut(s) 126, 246, 303, 326, 327, 447, 657
BseGI GGATG 9 cut(s) 214, 238, 323, 462, 469, 855, 899, 937, 1078
BseJI GATNNNNATC 1 cut(s) 1158
BseLI CCNNNNNNNGG 6 cut(s) 197, 296, 428, 453, 826, 1218
BseMI GCAATG 1 cut(s) 696
BseMII CTCAG 5 cut(s) 210, 389, 455, 1127, 1177
BseNI ACTGG 4 cut(s) 511, 559, 721, 784
BseSI GKGCMC 2 cut(s) 119, 434
BseXI GCAGC 5 cut(s) 28, 181, 535, 674, 941
BsgI GTGCAG 2 cut(s) 188, 741
Bsh1236I CGCG 5 cut(s) 46, 366, 561, 678, 1206
BshNI GGYRCC 2 cut(s) 431, 1172
BshVI ATCGAT 1 cut(s) 519
BsiHKAI GWGCWC 1 cut(s) 119
BsiSI CCGG 3 cut(s) 230, 494, 1195
BsiWI CGTACG 1 cut(s) 150
BslFI GGGAC 1 cut(s) 344
BslI CCNNNNNNNGG 6 cut(s) 197, 296, 428, 453, 826, 1218
BsmAI GTCTC 2 cut(s) 68, 86
BsmBI CGTCTC 1 cut(s) 68
BsmFI GGGAC 1 cut(s) 344
BsmI GAATGC 3 cut(s) 10, 247, 848
Bsp1286I GDGCHC 2 cut(s) 119, 434
Bsp13I TCCGGA 1 cut(s) 229
Bsp143I GATC 8 cut(s) 87, 102, 226, 388, 520, 530, 653, 946
Bsp19I CCATGG 1 cut(s) 447
BspACI CCGC 4 cut(s) 25, 417, 561, 687
BspCNI CTCAG 5 cut(s) 211, 388, 454, 1126, 1176
BspDI ATCGAT 1 cut(s) 519
BspEI TCCGGA 1 cut(s) 229
BspFNI CGCG 5 cut(s) 46, 366, 561, 678, 1206
BspHI TCATGA 1 cut(s) 258
BspLI GGNNCC 5 cut(s) 301, 433, 655, 819, 1174
BspPI GGATC 6 cut(s) 82, 221, 538, 648, 661, 941
BspT107I GGYRCC 2 cut(s) 431, 1172
BsrDI GCAATG 1 cut(s) 696
BsrFI RCCGGY 1 cut(s) 493
BsrI ACTGG 4 cut(s) 511, 559, 721, 784
BssAI RCCGGY 1 cut(s) 493
BssECI CCNNGG 7 cut(s) 126, 246, 303, 326, 327, 447, 657
BssMI GATC 8 cut(s) 87, 102, 226, 388, 520, 530, 653, 946
BssT1I CCWWGG 3 cut(s) 126, 303, 447
Bst2UI CCWGG 4 cut(s) 248, 265, 328, 658
Bst4CI ACNGT 1 cut(s) 1027
Bst6I CTCTTC 1 cut(s) 1071
BstBAI YACGTR 1 cut(s) 185
BstC8I GCNNGC 1 cut(s) 1204
BstDEI CTNAG 6 cut(s) 66, 219, 375, 441, 1113, 1163
BstDSI CCRYGG 1 cut(s) 447
BstF5I GGATG 9 cut(s) 214, 238, 323, 462, 469, 855, 899, 937, 1078
BstFNI CGCG 5 cut(s) 46, 366, 561, 678, 1206
BstHHI GCGC 3 cut(s) 46, 806, 1208
BstKTI GATC 8 cut(s) 90, 105, 229, 391, 523, 533, 656, 949
BstMAI GTCTC 2 cut(s) 68, 86
BstMBI GATC 8 cut(s) 87, 102, 226, 388, 520, 530, 653, 946
BstMWI GCNNNNNNNGC 4 cut(s) 14, 581, 590, 684
BstNI CCWGG 4 cut(s) 248, 265, 328, 658
BstNSI RCATGY 1 cut(s) 1141
BstPAI GACNNNNGTC 1 cut(s) 365
BstSCI CCNGG 5 cut(s) 246, 263, 326, 656, 1194
BstSLI GKGCMC 2 cut(s) 119, 434
BstUI CGCG 5 cut(s) 46, 366, 561, 678, 1206
BstV1I GCAGC 5 cut(s) 28, 181, 535, 674, 941
BstV2I GAAGAC 2 cut(s) 275, 361
BstX2I RGATCY 1 cut(s) 653
BstYI RGATCY 1 cut(s) 653
Bsu15I ATCGAT 1 cut(s) 519
Bsu36I CCTNAGG 1 cut(s) 219
BsuTUI ATCGAT 1 cut(s) 519
BtgI CCRYGG 1 cut(s) 447
BtgZI GCGATG 1 cut(s) 861
BtsCI GGATG 9 cut(s) 214, 238, 323, 462, 469, 855, 899, 937, 1078
BtsIMutI CAGTG 2 cut(s) 504, 777
Cac8I GCNNGC 1 cut(s) 1204
CaiI CAGNNNCTG 1 cut(s) 956
CciI TCATGA 1 cut(s) 258
CfoI GCGC 3 cut(s) 46, 806, 1208
Cfr10I RCCGGY 1 cut(s) 493
Cfr13I GGNCC 2 cut(s) 188, 817
ClaI ATCGAT 1 cut(s) 519
CseI GACGC 3 cut(s) 344, 355, 567
Csp6I GTAC 4 cut(s) 151, 469, 830, 1105
CviQI GTAC 4 cut(s) 151, 469, 830, 1105
DdeI CTNAG 6 cut(s) 66, 219, 375, 441, 1113, 1163
DpnI GATC 8 cut(s) 89, 104, 228, 390, 522, 532, 655, 948
DpnII GATC 8 cut(s) 87, 102, 226, 388, 520, 530, 653, 946
DraI TTTAAA 1 cut(s) 34
DriI GACNNNNNGTC 1 cut(s) 563
Eam1104I CTCTTC 1 cut(s) 1071
Eam1105I GACNNNNNGTC 1 cut(s) 563
EarI CTCTTC 1 cut(s) 1071
Eco130I CCWWGG 3 cut(s) 126, 303, 447
Eco32I GATATC 1 cut(s) 212
Eco47I GGWCC 2 cut(s) 188, 817
Eco57I CTGAAG 1 cut(s) 79
Eco72I CACGTG 1 cut(s) 185
Eco81I CCTNAGG 1 cut(s) 219
EcoRII CCWGG 4 cut(s) 246, 263, 326, 656
EcoRV GATATC 1 cut(s) 212
EcoT14I CCWWGG 3 cut(s) 126, 303, 447
ErhI CCWWGG 3 cut(s) 126, 303, 447
Esp3I CGTCTC 1 cut(s) 68
FalI AAGNNNNNCTT 2 cut(s) 573, 605
FaqI GGGAC 1 cut(s) 344
FauI CCCGC 1 cut(s) 424
FauNDI CATATG 1 cut(s) 292
FblI GTMKAC 1 cut(s) 282
Fnu4HI GCNGC 7 cut(s) 15, 25, 42, 170, 549, 663, 930
FokI GGATG 9 cut(s) 201, 245, 330, 469, 476, 842, 886, 924, 1085
Fsp4HI GCNGC 7 cut(s) 15, 25, 42, 170, 549, 663, 930
FspBI CTAG 1 cut(s) 536
GlaI GCGC 3 cut(s) 45, 805, 1207
GluI GCNGC 7 cut(s) 15, 25, 42, 170, 549, 663, 930
HapII CCGG 3 cut(s) 230, 494, 1195
HgaI GACGC 3 cut(s) 344, 355, 567
HhaI GCGC 3 cut(s) 46, 806, 1208
Hin6I GCGC 3 cut(s) 44, 804, 1206
HinP1I GCGC 3 cut(s) 44, 804, 1206
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HindIII AAGCTT 2 cut(s) 139, 582
HinfI GANTC 8 cut(s) 57, 79, 121, 159, 361, 741, 981, 1111
HpaII CCGG 3 cut(s) 230, 494, 1195
HphI GGTGA 3 cut(s) 483, 1033, 1096
Hpy166II GTNNAC 4 cut(s) 117, 188, 283, 1192
Hpy188III TCNNGA 6 cut(s) 85, 218, 230, 259, 950, 1132
Hpy8I GTNNAC 4 cut(s) 117, 188, 283, 1192
Hpy99I CGWCG 1 cut(s) 926
HpyAV CCTTC 5 cut(s) 103, 190, 870, 1075, 1186
HpyCH4III ACNGT 1 cut(s) 1027
HpyCH4IV ACGT 3 cut(s) 153, 184, 648
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 581, 590, 684
HpyF3I CTNAG 6 cut(s) 66, 219, 375, 441, 1113, 1163
HpySE526I ACGT 3 cut(s) 153, 184, 648
HspAI GCGC 3 cut(s) 44, 804, 1206
Kpn2I TCCGGA 1 cut(s) 229
Kzo9I GATC 8 cut(s) 87, 102, 226, 388, 520, 530, 653, 946
LmnI GCTCC 2 cut(s) 299, 352
Lsp1109I GCAGC 5 cut(s) 28, 181, 535, 674, 941
LweI GCATC 2 cut(s) 52, 308
MaeI CTAG 1 cut(s) 536
MaeII ACGT 3 cut(s) 153, 184, 648
MaeIII GTNAC 4 cut(s) 485, 502, 707, 1021
MalI GATC 8 cut(s) 89, 104, 228, 390, 522, 532, 655, 948
MboI GATC 8 cut(s) 87, 102, 226, 388, 520, 530, 653, 946
MboII GAAGA 3 cut(s) 280, 361, 1088
MflI RGATCY 1 cut(s) 653
MhlI GDGCHC 2 cut(s) 119, 434
MluCI AATT 4 cut(s) 28, 476, 793, 914
MlyI GAGTC 6 cut(s) 51, 88, 355, 735, 990, 1105
MmeI TCCRAC 3 cut(s) 136, 330, 441
MnlI CCTC 8 cut(s) 20, 194, 214, 538, 677, 820, 900, 919
MroI TCCGGA 1 cut(s) 229
MseI TTAA 5 cut(s) 33, 341, 726, 762, 791
MslI CAYNNNNRTG 3 cut(s) 177, 408, 701
MspI CCGG 3 cut(s) 230, 494, 1195
MspR9I CCNGG 5 cut(s) 248, 265, 328, 658, 1196
Mva1269I GAATGC 3 cut(s) 10, 247, 848
MvaI CCWGG 4 cut(s) 248, 265, 328, 658
MvnI CGCG 5 cut(s) 46, 366, 561, 678, 1206
MwoI GCNNNNNNNGC 4 cut(s) 14, 581, 590, 684
NciI CCSGG 1 cut(s) 1196
NcoI CCATGG 1 cut(s) 447
NdeI CATATG 1 cut(s) 292
NdeII GATC 8 cut(s) 87, 102, 226, 388, 520, 530, 653, 946
NlaIV GGNNCC 5 cut(s) 301, 433, 655, 819, 1174
NmuCI GTSAC 4 cut(s) 485, 502, 707, 1021
NspI RCATGY 1 cut(s) 1141
PagI TCATGA 1 cut(s) 258
PasI CCCWGGG 1 cut(s) 327
PciI ACATGT 1 cut(s) 1137
PctI GAATGC 3 cut(s) 10, 247, 848
PfeI GAWTC 2 cut(s) 121, 159
Pfl23II CGTACG 1 cut(s) 150
PflMI CCANNNNNTGG 2 cut(s) 296, 453
PkrI GCNGC 7 cut(s) 16, 26, 43, 171, 550, 664, 931
PleI GAGTC 6 cut(s) 51, 87, 355, 735, 989, 1105
PmaCI CACGTG 1 cut(s) 185
PmlI CACGTG 1 cut(s) 185
PpsI GAGTC 6 cut(s) 51, 87, 355, 735, 989, 1105
Ppu21I YACGTR 1 cut(s) 185
PscI ACATGT 1 cut(s) 1137
PshAI GACNNNNGTC 1 cut(s) 365
Psp6I CCWGG 4 cut(s) 246, 263, 326, 656
PspCI CACGTG 1 cut(s) 185
PspGI CCWGG 4 cut(s) 246, 263, 326, 656
PspLI CGTACG 1 cut(s) 150
PspN4I GGNNCC 5 cut(s) 301, 433, 655, 819, 1174
PspPI GGNCC 2 cut(s) 188, 817
PstNI CAGNNNCTG 1 cut(s) 956
PsuI RGATCY 1 cut(s) 653
RsaI GTAC 4 cut(s) 152, 470, 831, 1106
RsaNI GTAC 4 cut(s) 151, 469, 830, 1105
RseI CAYNNNNRTG 3 cut(s) 177, 408, 701
SalI GTCGAC 1 cut(s) 281
SaqAI TTAA 5 cut(s) 33, 341, 726, 762, 791
SatI GCNGC 7 cut(s) 15, 25, 42, 170, 549, 663, 930
Sau3AI GATC 8 cut(s) 87, 102, 226, 388, 520, 530, 653, 946
Sau96I GGNCC 2 cut(s) 188, 817
ScaI AGTACT 1 cut(s) 470
SchI GAGTC 6 cut(s) 51, 88, 355, 735, 990, 1105
ScrFI CCNGG 5 cut(s) 248, 265, 328, 658, 1196
SduI GDGCHC 2 cut(s) 119, 434
SfaNI GCATC 2 cut(s) 52, 308
SinI GGWCC 2 cut(s) 188, 817
SmiMI CAYNNNNRTG 3 cut(s) 177, 408, 701
SmlI CTYRAG 1 cut(s) 334
SmoI CTYRAG 1 cut(s) 334
Sse9I AATT 4 cut(s) 28, 476, 793, 914
SsiI CCGC 4 cut(s) 25, 417, 561, 687
SspMI CTAG 1 cut(s) 536
StyD4I CCNGG 5 cut(s) 246, 263, 326, 656, 1194
StyI CCWWGG 3 cut(s) 126, 303, 447
TaaI ACNGT 1 cut(s) 1027
TaiI ACGT 3 cut(s) 156, 187, 651
TaqI TCGA 5 cut(s) 60, 282, 519, 744, 924
TasI AATT 4 cut(s) 28, 476, 793, 914
TatI WGTACW 1 cut(s) 468
TauI GCSGC 1 cut(s) 27
TfiI GAWTC 2 cut(s) 121, 159
Tru1I TTAA 5 cut(s) 33, 341, 726, 762, 791
Tru9I TTAA 5 cut(s) 33, 341, 726, 762, 791
TscAI CASTG 2 cut(s) 511, 784
TseFI GTSAC 4 cut(s) 485, 502, 707, 1021
TseI GCWGC 6 cut(s) 14, 41, 169, 548, 662, 929
Tsp45I GTSAC 4 cut(s) 485, 502, 707, 1021
TspDTI ATGAA 8 cut(s) 17, 209, 249, 470, 888, 907, 1089, 1112
TspGWI ACGGA 1 cut(s) 892
TspRI CASTG 2 cut(s) 511, 784
Van91I CCANNNNNTGG 2 cut(s) 296, 453
VneI GTGCAC 1 cut(s) 115
VpaK11BI GGWCC 2 cut(s) 188, 817
XapI RAATTY 3 cut(s) 476, 793, 914
XceI RCATGY 1 cut(s) 1141
XcmI CCANNNNNNNNNTGG 1 cut(s) 392
XmiI GTMKAC 1 cut(s) 282
XspI CTAG 1 cut(s) 536
ZrmI AGTACT 1 cut(s) 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.