Ceramide
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51290 AT5G51290 |
| fragaria_vesca | FvH4_7g27040 FvH4_7g27040 |
| malus_domestica | MD01G1178000.v1.1 MD07G1250200.v1.1 |
| prunus_persica | Prupe.2G273600_v2.0.a1 Prupe.2G273600_v2.0.a1 Prupe.2G273600_v2.0.a1 |
| pyrus_communis | pycom01g18880 |
| rosa_chinensis | RchiOBHm_Chr1g0337211 RchiOBHm_Chr1g0373861 |
| rosa_laevigata | RLG00000026800 RLG00000029293 |
| rosa_multiflora | Rmu_sc0002160.1_g000003 Rmu_sc0013735.1_g000011 Rmu_ssc0000206.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00283960 Rroxscaffold_4G00314670 |
| rosa_rugosa | Rorug01G0132600.1 Rorug01G0379600 |
| rosa_samantha | Rh1AG389300 Rh1BG353500 Rh1CG106300 Rh1CG366800 Rh1DG108300 Rh1DG115200 Rh1DG384500 |
| rosa_wichuraiana | Rw1G034590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 373, 1477 |
| AccB1I | GGYRCC | 1 cut(s) | 1543 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 515 |
| AccII | CGCG | 1 cut(s) | 570 |
| AciI | CCGC | 3 cut(s) | 334, 568, 1136 |
| AclWI | GGATC | 4 cut(s) | 423, 803, 809, 1013 |
| AcoI | YGGCCR | 1 cut(s) | 94 |
| AcsI | RAATTY | 4 cut(s) | 185, 705, 1303, 1747 |
| AcuI | CTGAAG | 1 cut(s) | 744 |
| AfaI | GTAC | 3 cut(s) | 1003, 1128, 1193 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 515, 1201 |
| AflII | CTTAAG | 1 cut(s) | 874 |
| AgeI | ACCGGT | 1 cut(s) | 1823 |
| AgsI | TTSAA | 8 cut(s) | 115, 700, 836, 882, 1118, 1246, 1681, 1769 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 275 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 45, 77 |
| Alw21I | GWGCWC | 3 cut(s) | 362, 1015, 1358 |
| Alw26I | GTCTC | 5 cut(s) | 3, 283, 800, 907, 1463 |
| AlwI | GGATC | 4 cut(s) | 423, 803, 809, 1013 |
| Ama87I | CYCGRG | 1 cut(s) | 1014 |
| AoxI | GGCC | 2 cut(s) | 94, 479 |
| ApeKI | GCWGC | 3 cut(s) | 69, 531, 1514 |
| ApoI | RAATTY | 4 cut(s) | 185, 705, 1303, 1747 |
| AsiGI | ACCGGT | 1 cut(s) | 1823 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1764 |
| AspLEI | GCGC | 1 cut(s) | 572 |
| AspS9I | GGNCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| AsuHPI | GGTGA | 2 cut(s) | 601, 698 |
| AsuII | TTCGAA | 1 cut(s) | 194 |
| AvaI | CYCGRG | 1 cut(s) | 1014 |
| AvaII | GGWCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| BalI | TGGCCA | 1 cut(s) | 96 |
| BanI | GGYRCC | 1 cut(s) | 1543 |
| BanII | GRGCYC | 3 cut(s) | 362, 1015, 1358 |
| Bbv12I | GWGCWC | 3 cut(s) | 362, 1015, 1358 |
| BbvI | GCAGC | 3 cut(s) | 56, 518, 1501 |
| BceAI | ACGGC | 2 cut(s) | 746, 1368 |
| BclI | TGATCA | 2 cut(s) | 916, 1602 |
| BcoDI | GTCTC | 5 cut(s) | 3, 283, 800, 907, 1463 |
| BfaI | CTAG | 2 cut(s) | 780, 1482 |
| BfmI | CTRYAG | 1 cut(s) | 636 |
| BfrI | CTTAAG | 1 cut(s) | 874 |
| BisI | GCNGC | 4 cut(s) | 70, 532, 1137, 1515 |
| BlsI | GCNGC | 4 cut(s) | 71, 533, 1138, 1516 |
| Bme18I | GGWCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 275 |
| BmeT110I | CYCGRG | 1 cut(s) | 1014 |
| BmgT120I | GGNCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| BmiI | GGNNCC | 4 cut(s) | 440, 1206, 1427, 1545 |
| BmrI | ACTGGG | 1 cut(s) | 936 |
| BmsI | GCATC | 5 cut(s) | 189, 284, 976, 1555, 1645 |
| BmuI | ACTGGG | 1 cut(s) | 936 |
| Bpu10I | CCTNAGC | 1 cut(s) | 895 |
| Bpu14I | TTCGAA | 1 cut(s) | 194 |
| BpuEI | CTTGAG | 2 cut(s) | 164, 284 |
| BsaBI | GATNNNNATC | 2 cut(s) | 813, 1569 |
| BsaJI | CCNNGG | 3 cut(s) | 1048, 1488, 1798 |
| BsaWI | WCCGGW | 1 cut(s) | 1823 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 515, 1201 |
| Bse118I | RCCGGY | 1 cut(s) | 1823 |
| Bse1I | ACTGG | 1 cut(s) | 942 |
| Bse3DI | GCAATG | 2 cut(s) | 137, 1738 |
| Bse8I | GATNNNNATC | 2 cut(s) | 813, 1569 |
| BseDI | CCNNGG | 3 cut(s) | 1048, 1488, 1798 |
| BseGI | GGATG | 3 cut(s) | 505, 1206, 1759 |
| BseJI | GATNNNNATC | 2 cut(s) | 813, 1569 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 515, 1201 |
| BseMI | GCAATG | 2 cut(s) | 137, 1738 |
| BseMII | CTCAG | 7 cut(s) | 56, 315, 860, 909, 918, 1305, 1516 |
| BseNI | ACTGG | 1 cut(s) | 942 |
| BseRI | GAGGAG | 2 cut(s) | 855, 860 |
| BseXI | GCAGC | 3 cut(s) | 56, 518, 1501 |
| BseYI | CCCAGC | 1 cut(s) | 1148 |
| BsgI | GTGCAG | 1 cut(s) | 55 |
| Bsh1236I | CGCG | 1 cut(s) | 570 |
| Bsh1285I | CGRYCG | 1 cut(s) | 210 |
| BshFI | GGCC | 2 cut(s) | 96, 481 |
| BshNI | GGYRCC | 1 cut(s) | 1543 |
| BshTI | ACCGGT | 1 cut(s) | 1823 |
| BsiEI | CGRYCG | 1 cut(s) | 210 |
| BsiHKAI | GWGCWC | 3 cut(s) | 362, 1015, 1358 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1014 |
| BsiSI | CCGG | 1 cut(s) | 1824 |
| BslFI | GGGAC | 3 cut(s) | 557, 1218, 1411 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 515, 1201 |
| BsmAI | GTCTC | 5 cut(s) | 3, 283, 800, 907, 1463 |
| BsmBI | CGTCTC | 1 cut(s) | 3 |
| BsmFI | GGGAC | 3 cut(s) | 557, 1218, 1411 |
| BsmI | GAATGC | 1 cut(s) | 289 |
| BsnI | GGCC | 2 cut(s) | 96, 481 |
| BsoBI | CYCGRG | 1 cut(s) | 1014 |
| Bsp119I | TTCGAA | 1 cut(s) | 194 |
| Bsp1286I | GDGCHC | 3 cut(s) | 362, 1015, 1358 |
| Bsp1407I | TGTACA | 1 cut(s) | 1001 |
| Bsp143I | GATC | 7 cut(s) | 246, 415, 808, 814, 916, 1018, 1602 |
| BspACI | CCGC | 3 cut(s) | 334, 568, 1136 |
| BspANI | GGCC | 2 cut(s) | 96, 481 |
| BspCNI | CTCAG | 7 cut(s) | 57, 316, 859, 908, 919, 1306, 1515 |
| BspFNI | CGCG | 1 cut(s) | 570 |
| BspLI | GGNNCC | 4 cut(s) | 440, 1206, 1427, 1545 |
| BspPI | GGATC | 4 cut(s) | 423, 803, 809, 1013 |
| BspT104I | TTCGAA | 1 cut(s) | 194 |
| BspT107I | GGYRCC | 1 cut(s) | 1543 |
| BspTI | CTTAAG | 1 cut(s) | 874 |
| BsrDI | GCAATG | 2 cut(s) | 137, 1738 |
| BsrFI | RCCGGY | 1 cut(s) | 1823 |
| BsrGI | TGTACA | 1 cut(s) | 1001 |
| BsrI | ACTGG | 1 cut(s) | 942 |
| BssAI | RCCGGY | 1 cut(s) | 1823 |
| BssECI | CCNNGG | 3 cut(s) | 1048, 1488, 1798 |
| BssMI | GATC | 7 cut(s) | 246, 415, 808, 814, 916, 1018, 1602 |
| BssT1I | CCWWGG | 2 cut(s) | 1048, 1488 |
| Bst4CI | ACNGT | 4 cut(s) | 343, 548, 1196, 1613 |
| Bst6I | CTCTTC | 1 cut(s) | 375 |
| BstAFI | CTTAAG | 1 cut(s) | 874 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 614 |
| BstAUI | TGTACA | 1 cut(s) | 1001 |
| BstBI | TTCGAA | 1 cut(s) | 194 |
| BstC8I | GCNNGC | 5 cut(s) | 74, 615, 976, 1340, 1650 |
| BstDEI | CTNAG | 7 cut(s) | 65, 324, 846, 895, 927, 1314, 1502 |
| BstDSI | CCRYGG | 1 cut(s) | 1798 |
| BstF5I | GGATG | 3 cut(s) | 505, 1206, 1759 |
| BstFNI | CGCG | 1 cut(s) | 570 |
| BstHHI | GCGC | 1 cut(s) | 572 |
| BstKTI | GATC | 7 cut(s) | 249, 418, 811, 817, 919, 1021, 1605 |
| BstMAI | GTCTC | 5 cut(s) | 3, 283, 800, 907, 1463 |
| BstMBI | GATC | 7 cut(s) | 246, 415, 808, 814, 916, 1018, 1602 |
| BstMCI | CGRYCG | 1 cut(s) | 210 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 102, 478, 614, 1145, 1271, 1769 |
| BstNSI | RCATGY | 1 cut(s) | 617 |
| BstSFI | CTRYAG | 1 cut(s) | 636 |
| BstUI | CGCG | 1 cut(s) | 570 |
| BstV1I | GCAGC | 3 cut(s) | 56, 518, 1501 |
| BstX2I | RGATCY | 3 cut(s) | 415, 814, 1018 |
| BstYI | RGATCY | 3 cut(s) | 415, 814, 1018 |
| BsuRI | GGCC | 2 cut(s) | 96, 481 |
| BtgI | CCRYGG | 1 cut(s) | 1798 |
| BtsCI | GGATG | 3 cut(s) | 505, 1206, 1759 |
| BtsIMutI | CAGTG | 5 cut(s) | 348, 553, 912, 949, 1510 |
| Cac8I | GCNNGC | 5 cut(s) | 74, 615, 976, 1340, 1650 |
| CfoI | GCGC | 1 cut(s) | 572 |
| Cfr10I | RCCGGY | 1 cut(s) | 1823 |
| Cfr13I | GGNCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| Csp6I | GTAC | 3 cut(s) | 1002, 1127, 1192 |
| CspAI | ACCGGT | 1 cut(s) | 1823 |
| CviAII | CATG | 5 cut(s) | 317, 347, 383, 614, 1619 |
| CviQI | GTAC | 3 cut(s) | 1002, 1127, 1192 |
| DdeI | CTNAG | 7 cut(s) | 65, 324, 846, 895, 927, 1314, 1502 |
| DpnI | GATC | 7 cut(s) | 248, 417, 810, 816, 918, 1020, 1604 |
| DpnII | GATC | 7 cut(s) | 246, 415, 808, 814, 916, 1018, 1602 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 373, 1477 |
| DriI | GACNNNNNGTC | 1 cut(s) | 275 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 373, 1477 |
| EaeI | YGGCCR | 1 cut(s) | 94 |
| Eam1104I | CTCTTC | 1 cut(s) | 375 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 275 |
| EarI | CTCTTC | 1 cut(s) | 375 |
| Ecl136II | GAGCTC | 3 cut(s) | 360, 1013, 1356 |
| Eco130I | CCWWGG | 2 cut(s) | 1048, 1488 |
| Eco24I | GRGCYC | 3 cut(s) | 362, 1015, 1358 |
| Eco32I | GATATC | 1 cut(s) | 214 |
| Eco47I | GGWCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| Eco53kI | GAGCTC | 3 cut(s) | 360, 1013, 1356 |
| Eco57I | CTGAAG | 1 cut(s) | 744 |
| Eco88I | CYCGRG | 1 cut(s) | 1014 |
| EcoICRI | GAGCTC | 3 cut(s) | 360, 1013, 1356 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1205, 1254, 1425 |
| EcoRV | GATATC | 1 cut(s) | 214 |
| EcoT14I | CCWWGG | 2 cut(s) | 1048, 1488 |
| EcoT38I | GRGCYC | 3 cut(s) | 362, 1015, 1358 |
| ErhI | CCWWGG | 2 cut(s) | 1048, 1488 |
| Esp3I | CGTCTC | 1 cut(s) | 3 |
| FaeI | CATG | 5 cut(s) | 320, 350, 386, 617, 1622 |
| FaqI | GGGAC | 3 cut(s) | 557, 1218, 1411 |
| FatI | CATG | 5 cut(s) | 316, 346, 382, 613, 1618 |
| FauI | CCCGC | 1 cut(s) | 575 |
| FauNDI | CATATG | 1 cut(s) | 661 |
| FbaI | TGATCA | 2 cut(s) | 916, 1602 |
| Fnu4HI | GCNGC | 4 cut(s) | 70, 532, 1137, 1515 |
| FokI | GGATG | 3 cut(s) | 492, 1213, 1766 |
| FriOI | GRGCYC | 3 cut(s) | 362, 1015, 1358 |
| Fsp4HI | GCNGC | 4 cut(s) | 70, 532, 1137, 1515 |
| FspBI | CTAG | 2 cut(s) | 780, 1482 |
| GlaI | GCGC | 1 cut(s) | 571 |
| GluI | GCNGC | 4 cut(s) | 70, 532, 1137, 1515 |
| GsaI | CCCAGC | 1 cut(s) | 1152 |
| HaeIII | GGCC | 2 cut(s) | 96, 481 |
| HapII | CCGG | 1 cut(s) | 1824 |
| HhaI | GCGC | 1 cut(s) | 572 |
| Hin1II | CATG | 5 cut(s) | 320, 350, 386, 617, 1622 |
| Hin6I | GCGC | 1 cut(s) | 570 |
| HinP1I | GCGC | 1 cut(s) | 570 |
| HindIII | AAGCTT | 1 cut(s) | 837 |
| HpaII | CCGG | 1 cut(s) | 1824 |
| HphI | GGTGA | 2 cut(s) | 601, 698 |
| Hpy166II | GTNNAC | 3 cut(s) | 314, 947, 1002 |
| Hpy188III | TCNNGA | 9 cut(s) | 280, 311, 355, 461, 812, 897, 920, 1016, 1829 |
| Hpy8I | GTNNAC | 3 cut(s) | 314, 947, 1002 |
| HpyAV | CCTTC | 4 cut(s) | 190, 514, 768, 946 |
| HpyCH4III | ACNGT | 4 cut(s) | 343, 548, 1196, 1613 |
| HpyCH4IV | ACGT | 1 cut(s) | 90 |
| HpyCH4V | TGCA | 8 cut(s) | 72, 180, 203, 346, 534, 1226, 1395, 1568 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 102, 478, 614, 1145, 1271, 1769 |
| HpyF3I | CTNAG | 7 cut(s) | 65, 324, 846, 895, 927, 1314, 1502 |
| HpySE526I | ACGT | 1 cut(s) | 90 |
| Hsp92II | CATG | 5 cut(s) | 320, 350, 386, 617, 1622 |
| HspAI | GCGC | 1 cut(s) | 570 |
| Ksp22I | TGATCA | 2 cut(s) | 916, 1602 |
| Kzo9I | GATC | 7 cut(s) | 246, 415, 808, 814, 916, 1018, 1602 |
| LmnI | GCTCC | 4 cut(s) | 745, 1010, 1353, 1412 |
| Lsp1109I | GCAGC | 3 cut(s) | 56, 518, 1501 |
| LweI | GCATC | 5 cut(s) | 189, 284, 976, 1555, 1645 |
| MaeI | CTAG | 2 cut(s) | 780, 1482 |
| MaeII | ACGT | 1 cut(s) | 90 |
| MaeIII | GTNAC | 2 cut(s) | 595, 821 |
| MalI | GATC | 7 cut(s) | 248, 417, 810, 816, 918, 1020, 1604 |
| MboI | GATC | 7 cut(s) | 246, 415, 808, 814, 916, 1018, 1602 |
| MboII | GAAGA | 7 cut(s) | 303, 362, 482, 717, 834, 1307, 1716 |
| MflI | RGATCY | 3 cut(s) | 415, 814, 1018 |
| MhlI | GDGCHC | 3 cut(s) | 362, 1015, 1358 |
| MlsI | TGGCCA | 1 cut(s) | 96 |
| MluCI | AATT | 5 cut(s) | 185, 705, 1303, 1521, 1747 |
| MluNI | TGGCCA | 1 cut(s) | 96 |
| MlyI | GAGTC | 7 cut(s) | 158, 314, 361, 562, 802, 909, 957 |
| MmeI | TCCRAC | 2 cut(s) | 776, 1178 |
| MnlI | CCTC | 9 cut(s) | 67, 116, 308, 471, 759, 876, 881, 1080, 1655 |
| Mox20I | TGGCCA | 1 cut(s) | 96 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1764 |
| MscI | TGGCCA | 1 cut(s) | 96 |
| MseI | TTAA | 3 cut(s) | 711, 875, 953 |
| MslI | CAYNNNNRTG | 2 cut(s) | 618, 995 |
| Msp20I | TGGCCA | 1 cut(s) | 96 |
| MspCI | CTTAAG | 1 cut(s) | 874 |
| MspI | CCGG | 1 cut(s) | 1824 |
| Mva1269I | GAATGC | 1 cut(s) | 289 |
| MvnI | CGCG | 1 cut(s) | 570 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 102, 478, 614, 1145, 1271, 1769 |
| NdeI | CATATG | 1 cut(s) | 661 |
| NdeII | GATC | 7 cut(s) | 246, 415, 808, 814, 916, 1018, 1602 |
| NlaIII | CATG | 5 cut(s) | 320, 350, 386, 617, 1622 |
| NlaIV | GGNNCC | 4 cut(s) | 440, 1206, 1427, 1545 |
| NmuCI | GTSAC | 2 cut(s) | 595, 821 |
| NspI | RCATGY | 1 cut(s) | 617 |
| NspV | TTCGAA | 1 cut(s) | 194 |
| PaeI | GCATGC | 1 cut(s) | 617 |
| PaeR7I | CTCGAG | 1 cut(s) | 1014 |
| PctI | GAATGC | 1 cut(s) | 289 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1764 |
| PfeI | GAWTC | 5 cut(s) | 47, 262, 487, 773, 1436 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 515 |
| PinAI | ACCGGT | 1 cut(s) | 1823 |
| PkrI | GCNGC | 4 cut(s) | 71, 533, 1138, 1516 |
| PleI | GAGTC | 7 cut(s) | 158, 314, 361, 561, 801, 908, 957 |
| PpsI | GAGTC | 7 cut(s) | 158, 314, 361, 561, 801, 908, 957 |
| PpuMI | RGGWCCY | 3 cut(s) | 1205, 1254, 1425 |
| Psp124BI | GAGCTC | 3 cut(s) | 362, 1015, 1358 |
| Psp5II | RGGWCCY | 3 cut(s) | 1205, 1254, 1425 |
| PspFI | CCCAGC | 1 cut(s) | 1148 |
| PspN4I | GGNNCC | 4 cut(s) | 440, 1206, 1427, 1545 |
| PspPI | GGNCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| PspPPI | RGGWCCY | 3 cut(s) | 1205, 1254, 1425 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1110, 1142 |
| PsuI | RGATCY | 3 cut(s) | 415, 814, 1018 |
| RsaI | GTAC | 3 cut(s) | 1003, 1128, 1193 |
| RsaNI | GTAC | 3 cut(s) | 1002, 1127, 1192 |
| RseI | CAYNNNNRTG | 2 cut(s) | 618, 995 |
| SacI | GAGCTC | 3 cut(s) | 362, 1015, 1358 |
| SaqAI | TTAA | 3 cut(s) | 711, 875, 953 |
| SatI | GCNGC | 4 cut(s) | 70, 532, 1137, 1515 |
| Sau3AI | GATC | 7 cut(s) | 246, 415, 808, 814, 916, 1018, 1602 |
| Sau96I | GGNCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| SchI | GAGTC | 7 cut(s) | 158, 314, 361, 562, 802, 909, 957 |
| SduI | GDGCHC | 3 cut(s) | 362, 1015, 1358 |
| SfaNI | GCATC | 5 cut(s) | 189, 284, 976, 1555, 1645 |
| SfcI | CTRYAG | 1 cut(s) | 636 |
| Sfr274I | CTCGAG | 1 cut(s) | 1014 |
| SfuI | TTCGAA | 1 cut(s) | 194 |
| SinI | GGWCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| SlaI | CTCGAG | 1 cut(s) | 1014 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 618, 995 |
| SmlI | CTYRAG | 4 cut(s) | 143, 299, 874, 1014 |
| SmoI | CTYRAG | 4 cut(s) | 143, 299, 874, 1014 |
| SphI | GCATGC | 1 cut(s) | 617 |
| Sse9I | AATT | 5 cut(s) | 185, 705, 1303, 1521, 1747 |
| SsiI | CCGC | 3 cut(s) | 334, 568, 1136 |
| SspMI | CTAG | 2 cut(s) | 780, 1482 |
| SstI | GAGCTC | 3 cut(s) | 362, 1015, 1358 |
| StyI | CCWWGG | 2 cut(s) | 1048, 1488 |
| TaaI | ACNGT | 4 cut(s) | 343, 548, 1196, 1613 |
| TaiI | ACGT | 1 cut(s) | 93 |
| TaqI | TCGA | 5 cut(s) | 194, 281, 289, 1015, 1307 |
| TaqII | GACCGA | 2 cut(s) | 224, 614 |
| TasI | AATT | 5 cut(s) | 185, 705, 1303, 1521, 1747 |
| TatI | WGTACW | 1 cut(s) | 1001 |
| TauI | GCSGC | 1 cut(s) | 1139 |
| TfiI | GAWTC | 5 cut(s) | 47, 262, 487, 773, 1436 |
| Tru1I | TTAA | 3 cut(s) | 711, 875, 953 |
| Tru9I | TTAA | 3 cut(s) | 711, 875, 953 |
| TscAI | CASTG | 5 cut(s) | 348, 553, 919, 949, 1510 |
| TseFI | GTSAC | 2 cut(s) | 595, 821 |
| TseI | GCWGC | 3 cut(s) | 69, 531, 1514 |
| Tsp45I | GTSAC | 2 cut(s) | 595, 821 |
| TspDTI | ATGAA | 6 cut(s) | 69, 371, 494, 648, 870, 1551 |
| TspGWI | ACGGA | 3 cut(s) | 282, 363, 1787 |
| TspRI | CASTG | 5 cut(s) | 348, 553, 919, 949, 1510 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 515 |
| Vha464I | CTTAAG | 1 cut(s) | 874 |
| VpaK11BI | GGWCC | 7 cut(s) | 85, 269, 439, 1205, 1254, 1425, 1826 |
| XapI | RAATTY | 4 cut(s) | 185, 705, 1303, 1747 |
| XceI | RCATGY | 1 cut(s) | 617 |
| XhoI | CTCGAG | 1 cut(s) | 1014 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1764 |
| XspI | CTAG | 2 cut(s) | 780, 1482 |