Ceramide
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51290 AT5G51290 |
| fragaria_vesca | FvH4_7g27040 FvH4_7g27040 |
| malus_domestica | MD01G1178000.v1.1 MD07G1250200.v1.1 |
| prunus_persica | Prupe.2G273600_v2.0.a1 Prupe.2G273600_v2.0.a1 Prupe.2G273600_v2.0.a1 |
| pyrus_communis | pycom01g18880 |
| rosa_chinensis | RchiOBHm_Chr1g0337211 RchiOBHm_Chr1g0373861 |
| rosa_laevigata | RLG00000026800 RLG00000029293 |
| rosa_multiflora | Rmu_sc0002160.1_g000003 Rmu_sc0013735.1_g000011 Rmu_ssc0000206.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00283960 Rroxscaffold_4G00314670 |
| rosa_rugosa | Rorug01G0132600.1 Rorug01G0379600 |
| rosa_samantha | Rh1AG389300 Rh1BG353500 Rh1CG106300 Rh1CG366800 Rh1DG108300 Rh1DG115200 Rh1DG384500 |
| rosa_wichuraiana | Rw1G034590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 273 |
| AclWI | GGATC | 1 cut(s) | 176 |
| AcsI | RAATTY | 1 cut(s) | 78 |
| AcuI | CTGAAG | 1 cut(s) | 117 |
| AgsI | TTSAA | 4 cut(s) | 73, 102, 203, 249 |
| AluBI | AGCT | 2 cut(s) | 25, 206 |
| AluI | AGCT | 2 cut(s) | 25, 206 |
| Alw26I | GTCTC | 3 cut(s) | 173, 234, 281 |
| AlwI | GGATC | 1 cut(s) | 176 |
| ApoI | RAATTY | 1 cut(s) | 78 |
| AseI | ATTAAT | 1 cut(s) | 255 |
| AsuHPI | GGTGA | 1 cut(s) | 71 |
| BccI | CCATC | 1 cut(s) | 56 |
| BcoDI | GTCTC | 3 cut(s) | 173, 234, 281 |
| BfaI | CTAG | 1 cut(s) | 153 |
| BfmI | CTRYAG | 1 cut(s) | 9 |
| Bpu10I | CCTNAGC | 1 cut(s) | 262 |
| BpuEI | CTTGAG | 1 cut(s) | 226 |
| BseMII | CTCAG | 3 cut(s) | 227, 276, 283 |
| BseRI | GAGGAG | 1 cut(s) | 227 |
| BsmAI | GTCTC | 3 cut(s) | 173, 234, 281 |
| Bsp143I | GATC | 1 cut(s) | 181 |
| BspCNI | CTCAG | 3 cut(s) | 226, 275, 282 |
| BspPI | GGATC | 1 cut(s) | 176 |
| BssMI | GATC | 1 cut(s) | 181 |
| Bst4CI | ACNGT | 1 cut(s) | 196 |
| BstDEI | CTNAG | 3 cut(s) | 213, 262, 269 |
| BstKTI | GATC | 1 cut(s) | 184 |
| BstMAI | GTCTC | 3 cut(s) | 173, 234, 281 |
| BstMBI | GATC | 1 cut(s) | 181 |
| BstSFI | CTRYAG | 1 cut(s) | 9 |
| CviJI | RGCY | 6 cut(s) | 25, 50, 66, 206, 261, 296 |
| CviKI_1 | RGCY | 6 cut(s) | 25, 50, 66, 206, 261, 296 |
| DdeI | CTNAG | 3 cut(s) | 213, 262, 269 |
| DpnI | GATC | 1 cut(s) | 183 |
| DpnII | GATC | 1 cut(s) | 181 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 273 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 273 |
| Eco57I | CTGAAG | 1 cut(s) | 117 |
| FaiI | YATR | 6 cut(s) | 11, 34, 36, 47, 108, 118 |
| FauNDI | CATATG | 1 cut(s) | 34 |
| FspBI | CTAG | 1 cut(s) | 153 |
| HindIII | AAGCTT | 1 cut(s) | 204 |
| HinfI | GANTC | 4 cut(s) | 146, 166, 267, 274 |
| HphI | GGTGA | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 2 cut(s) | 136, 216 |
| Hpy188III | TCNNGA | 3 cut(s) | 264, 271, 291 |
| HpyAV | CCTTC | 1 cut(s) | 141 |
| HpyCH4III | ACNGT | 1 cut(s) | 196 |
| HpyF3I | CTNAG | 3 cut(s) | 213, 262, 269 |
| Kzo9I | GATC | 1 cut(s) | 181 |
| LmnI | GCTCC | 1 cut(s) | 22 |
| LpnPI | CCDG | 3 cut(s) | 4, 249, 256 |
| MaeI | CTAG | 1 cut(s) | 153 |
| MalI | GATC | 1 cut(s) | 183 |
| MboI | GATC | 1 cut(s) | 181 |
| MboII | GAAGA | 1 cut(s) | 90 |
| MluCI | AATT | 1 cut(s) | 78 |
| MlyI | GAGTC | 3 cut(s) | 175, 261, 283 |
| MnlI | CCTC | 2 cut(s) | 245, 248 |
| MseI | TTAA | 2 cut(s) | 84, 255 |
| NdeI | CATATG | 1 cut(s) | 34 |
| NdeII | GATC | 1 cut(s) | 181 |
| PfeI | GAWTC | 1 cut(s) | 146 |
| PleI | GAGTC | 3 cut(s) | 174, 261, 282 |
| PpsI | GAGTC | 3 cut(s) | 174, 261, 282 |
| PshBI | ATTAAT | 1 cut(s) | 255 |
| SaqAI | TTAA | 2 cut(s) | 84, 255 |
| Sau3AI | GATC | 1 cut(s) | 181 |
| SchI | GAGTC | 3 cut(s) | 175, 261, 283 |
| SetI | ASST | 2 cut(s) | 27, 208 |
| SfcI | CTRYAG | 1 cut(s) | 9 |
| SgeI | CNNG | 9 cut(s) | 31, 114, 155, 165, 182, 198, 255, 276, 283 |
| SmlI | CTYRAG | 1 cut(s) | 241 |
| SmoI | CTYRAG | 1 cut(s) | 241 |
| Sse9I | AATT | 1 cut(s) | 78 |
| SspI | AATATT | 1 cut(s) | 253 |
| SspMI | CTAG | 1 cut(s) | 153 |
| TaaI | ACNGT | 1 cut(s) | 196 |
| TasI | AATT | 1 cut(s) | 78 |
| TfiI | GAWTC | 1 cut(s) | 146 |
| Tru1I | TTAA | 2 cut(s) | 84, 255 |
| Tru9I | TTAA | 2 cut(s) | 84, 255 |
| TspDTI | ATGAA | 2 cut(s) | 21, 54 |
| VspI | ATTAAT | 1 cut(s) | 255 |
| XapI | RAATTY | 1 cut(s) | 78 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 83 |
| XspI | CTAG | 1 cut(s) | 153 |