Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005461

Physical Location & Seq

Genomic Coordinates Reverse (-)

31899833 .. 31901079

Gene Structure 1247 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1250200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 621 bp

ATGTTAAACGATGAGTTGATGGTACCGTTTAATCATGAAATTTTAAAATTTCTAGTACTGTATAATAAACAGGATGTCTCAACTTGTTTGGGCATCACATTTGCTTCAAAGGTTGCAACTGAGATCCAATTTTCCGATGTGTATACCGTTGAGTTGATCAGCCACAGTTTGATACATGGACCAAAGGTTTCAAATGCTACAAAATGCCTTTCCGGTCGTCATGAATACGAGGTTCAGATTTACCGCATTACAGTGCACGGTTTCCAGCAGTCAAAGGCTCTGCCTTCTCTTTTGGTCCTGGCTGCATGTACATTTGGTCATAAGGATCTCCAAACATGTCAGATGTGGGTTGAACAGATCAATGCTTCTCTGGCCATAGAACAAGGGCGACCAAAGAATCTATTGGTTTTTGTTCATCCAAGGAGTGGGAAGGGAAACGGCTGCAAAATTTGGGACTCGGTGGCTCCTATATTCTCCCATGCTAAAGTGAAAACAAGGGTCATTGTGACCCAAAGGTCAGGGAATGCATATGATATGATGGCATCTGTAGGTAACAAAGAGCTTGCTTCATATGACGGAGTTGTAGTCGTTGTACGGATTTTATGGACATGTCATTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001727 GO:0001729 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0006629 GO:0006643 GO:0006665 GO:0006672 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0009987 GO:0010941 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0030258 GO:0034641 GO:0043067 GO:0043069 GO:0043167 GO:0043169 GO:0043603 GO:0044237 GO:0044238 GO:0044255 GO:0046834 GO:0046872 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00600 map00600

Pfam Domains

Protein Families

DAGK_cat

Protein Analysis

207

Amino Acids

23.04

Weight (kDa)

8.71

Isoelectric Point (pI)

43.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAGK_cat	PF00781	134 - 197	4.7e-08	Diacylglycerol kinase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51290 AT5G51290
fragaria_vesca	FvH4_7g27040 FvH4_7g27040
malus_domestica	MD01G1178000.v1.1 MD07G1250200.v1.1
prunus_persica	Prupe.2G273600_v2.0.a1 Prupe.2G273600_v2.0.a1 Prupe.2G273600_v2.0.a1
pyrus_communis	pycom01g18880
rosa_chinensis	RchiOBHm_Chr1g0337211 RchiOBHm_Chr1g0373861
rosa_laevigata	RLG00000026800 RLG00000029293
rosa_multiflora	Rmu_sc0002160.1_g000003 Rmu_sc0013735.1_g000011 Rmu_ssc0000206.1_g000002
rosa_roxburghii	Rroxscaffold_4G00283960 Rroxscaffold_4G00314670
rosa_rugosa	Rorug01G0132600.1 Rorug01G0379600
rosa_samantha	Rh1AG389300 Rh1BG353500 Rh1CG106300 Rh1CG366800 Rh1DG108300 Rh1DG115200 Rh1DG384500
rosa_wichuraiana	Rw1G034590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	514
Acc65I	GGTACC	1 cut(s)	22
AccB1I	GGYRCC	1 cut(s)	22
AccB7I	CCANNNNNTGG	1 cut(s)	425
AccI	GTMKAC	1 cut(s)	143
AciI	CCGC	1 cut(s)	244
AclWI	GGATC	2 cut(s)	118, 333
AcoI	YGGCCR	1 cut(s)	372
AcsI	RAATTY	3 cut(s)	39, 47, 447
AfaI	GTAC	4 cut(s)	24, 57, 310, 594
AfiI	CCNNNNNNNGG	1 cut(s)	425
AflIII	ACRYGT	2 cut(s)	335, 608
AgsI	TTSAA	3 cut(s)	108, 192, 353
AjnI	CCWGG	1 cut(s)	297
AluBI	AGCT	1 cut(s)	562
AluI	AGCT	1 cut(s)	562
Alw21I	GWGCWC	1 cut(s)	258
Alw26I	GTCTC	1 cut(s)	82
Alw44I	GTGCAC	1 cut(s)	254
AlwI	GGATC	2 cut(s)	118, 333
AoxI	GGCC	1 cut(s)	372
ApaLI	GTGCAC	1 cut(s)	254
ApeKI	GCWGC	2 cut(s)	302, 441
ApoI	RAATTY	3 cut(s)	39, 47, 447
Asp718I	GGTACC	1 cut(s)	22
AspS9I	GGNCC	2 cut(s)	179, 295
AvaII	GGWCC	2 cut(s)	179, 295
BaeGI	GKGCMC	1 cut(s)	258
BalI	TGGCCA	1 cut(s)	374
BanI	GGYRCC	1 cut(s)	22
Bbv12I	GWGCWC	1 cut(s)	258
BbvI	GCAGC	2 cut(s)	289, 428
BccI	CCATC	2 cut(s)	13, 532
BceAI	ACGGC	1 cut(s)	454
BciT130I	CCWGG	1 cut(s)	299
BclI	TGATCA	1 cut(s)	156
BcoDI	GTCTC	1 cut(s)	82
BfaI	CTAG	1 cut(s)	53
BfmI	CTRYAG	1 cut(s)	546
BisI	GCNGC	2 cut(s)	303, 442
BlsI	GCNGC	2 cut(s)	304, 443
BmcAI	AGTACT	1 cut(s)	57
Bme1390I	CCNGG	1 cut(s)	299
Bme18I	GGWCC	2 cut(s)	179, 295
BmgT120I	GGNCC	2 cut(s)	179, 295
BmiI	GGNNCC	2 cut(s)	24, 465
BmrFI	CCNGG	1 cut(s)	299
BmsI	GCATC	2 cut(s)	102, 551
BsaJI	CCNNGG	1 cut(s)	419
BsaWI	WCCGGW	1 cut(s)	212
BsaXI	ACNNNNNCTCC	2 cut(s)	570, 600
Bsc4I	CCNNNNNNNGG	1 cut(s)	425
BseBI	CCWGG	1 cut(s)	299
BseDI	CCNNGG	1 cut(s)	419
BseGI	GGATG	2 cut(s)	79, 415
BseLI	CCNNNNNNNGG	1 cut(s)	425
BseMII	CTCAG	1 cut(s)	111
BseSI	GKGCMC	1 cut(s)	258
BseXI	GCAGC	2 cut(s)	289, 428
Bsh1285I	CGRYCG	1 cut(s)	217
BshFI	GGCC	1 cut(s)	374
BshNI	GGYRCC	1 cut(s)	22
BsiEI	CGRYCG	1 cut(s)	217
BsiHKAI	GWGCWC	1 cut(s)	258
BsiSI	CCGG	1 cut(s)	213
BslFI	GGGAC	1 cut(s)	467
BslI	CCNNNNNNNGG	1 cut(s)	425
BsmAI	GTCTC	1 cut(s)	82
BsmFI	GGGAC	1 cut(s)	467
BsmI	GAATGC	1 cut(s)	529
BsnI	GGCC	1 cut(s)	374
Bsp1286I	GDGCHC	1 cut(s)	258
Bsp1407I	TGTACA	1 cut(s)	308
Bsp143I	GATC	4 cut(s)	123, 156, 325, 357
BspACI	CCGC	1 cut(s)	244
BspANI	GGCC	1 cut(s)	374
BspCNI	CTCAG	1 cut(s)	112
BspHI	TCATGA	2 cut(s)	34, 220
BspLI	GGNNCC	2 cut(s)	24, 465
BspPI	GGATC	2 cut(s)	118, 333
BspT107I	GGYRCC	1 cut(s)	22
BsrGI	TGTACA	1 cut(s)	308
BssECI	CCNNGG	1 cut(s)	419
BssMI	GATC	4 cut(s)	123, 156, 325, 357
BssNAI	GTATAC	1 cut(s)	144
BssT1I	CCWWGG	1 cut(s)	419
Bst1107I	GTATAC	1 cut(s)	144
Bst2UI	CCWGG	1 cut(s)	299
Bst4CI	ACNGT	6 cut(s)	27, 60, 148, 167, 253, 260
BstAUI	TGTACA	1 cut(s)	308
BstC8I	GCNNGC	1 cut(s)	564
BstDEI	CTNAG	1 cut(s)	120
BstF5I	GGATG	2 cut(s)	79, 415
BstKTI	GATC	4 cut(s)	126, 159, 328, 360
BstMAI	GTCTC	1 cut(s)	82
BstMBI	GATC	4 cut(s)	123, 156, 325, 357
BstMCI	CGRYCG	1 cut(s)	217
BstMWI	GCNNNNNNNGC	1 cut(s)	371
BstNI	CCWGG	1 cut(s)	299
BstNSI	RCATGY	3 cut(s)	309, 339, 612
BstSCI	CCNGG	1 cut(s)	297
BstSFI	CTRYAG	1 cut(s)	546
BstSLI	GKGCMC	1 cut(s)	258
BstV1I	GCAGC	2 cut(s)	289, 428
BstX2I	RGATCY	2 cut(s)	123, 325
BstYI	RGATCY	2 cut(s)	123, 325
BstZ17I	GTATAC	1 cut(s)	144
BsuRI	GGCC	1 cut(s)	374
BtsCI	GGATG	2 cut(s)	79, 415
BtsIMutI	CAGTG	1 cut(s)	258
Cac8I	GCNNGC	1 cut(s)	564
CciI	TCATGA	2 cut(s)	34, 220
Cfr13I	GGNCC	2 cut(s)	179, 295
Csp6I	GTAC	4 cut(s)	23, 56, 309, 593
CviAII	CATG	7 cut(s)	35, 176, 221, 306, 336, 479, 609
CviJI	RGCY	7 cut(s)	162, 278, 302, 374, 441, 464, 562
CviKI_1	RGCY	7 cut(s)	162, 278, 302, 374, 441, 464, 562
CviQI	GTAC	4 cut(s)	23, 56, 309, 593
DdeI	CTNAG	1 cut(s)	120
DpnI	GATC	4 cut(s)	125, 158, 327, 359
DpnII	GATC	4 cut(s)	123, 156, 325, 357
DraI	TTTAAA	1 cut(s)	45
DrdI	GACNNNNNNGTC	1 cut(s)	514
DseDI	GACNNNNNNGTC	1 cut(s)	514
EaeI	YGGCCR	1 cut(s)	372
Eco130I	CCWWGG	1 cut(s)	419
Eco47I	GGWCC	2 cut(s)	179, 295
EcoRII	CCWGG	1 cut(s)	297
EcoT14I	CCWWGG	1 cut(s)	419
EcoT22I	ATGCAT	1 cut(s)	529
ErhI	CCWWGG	1 cut(s)	419
FaeI	CATG	7 cut(s)	38, 179, 224, 309, 339, 482, 612
FaqI	GGGAC	1 cut(s)	467
FatI	CATG	7 cut(s)	34, 175, 220, 305, 335, 478, 608
FauNDI	CATATG	2 cut(s)	529, 571
FbaI	TGATCA	1 cut(s)	156
FblI	GTMKAC	1 cut(s)	143
Fnu4HI	GCNGC	2 cut(s)	303, 442
FokI	GGATG	2 cut(s)	86, 402
Fsp4HI	GCNGC	2 cut(s)	303, 442
FspBI	CTAG	1 cut(s)	53
GluI	GCNGC	2 cut(s)	303, 442
HaeIII	GGCC	1 cut(s)	374
HapII	CCGG	1 cut(s)	213
Hin1II	CATG	7 cut(s)	38, 179, 224, 309, 339, 482, 612
HinfI	GANTC	2 cut(s)	397, 455
HpaII	CCGG	1 cut(s)	213
Hpy166II	GTNNAC	2 cut(s)	144, 256
Hpy188I	TCNGA	3 cut(s)	136, 237, 342
Hpy188III	TCNNGA	2 cut(s)	35, 221
Hpy8I	GTNNAC	2 cut(s)	144, 256
HpyAV	CCTTC	2 cut(s)	294, 424
HpyCH4III	ACNGT	6 cut(s)	27, 60, 148, 167, 253, 260
HpyCH4V	TGCA	5 cut(s)	116, 256, 305, 444, 527
HpyF10VI	GCNNNNNNNGC	1 cut(s)	371
HpyF3I	CTNAG	1 cut(s)	120
Hsp92II	CATG	7 cut(s)	38, 179, 224, 309, 339, 482, 612
KpnI	GGTACC	1 cut(s)	26
Ksp22I	TGATCA	1 cut(s)	156
Kzo9I	GATC	4 cut(s)	123, 156, 325, 357
LmnI	GCTCC	1 cut(s)	469
LpnPI	CCDG	7 cut(s)	56, 226, 278, 284, 311, 356, 504
Lsp1109I	GCAGC	2 cut(s)	289, 428
LweI	GCATC	2 cut(s)	102, 551
MaeI	CTAG	1 cut(s)	53
MaeIII	GTNAC	2 cut(s)	505, 551
MalI	GATC	4 cut(s)	125, 158, 327, 359
MboI	GATC	4 cut(s)	123, 156, 325, 357
MflI	RGATCY	2 cut(s)	123, 325
MhlI	GDGCHC	1 cut(s)	258
MlsI	TGGCCA	1 cut(s)	374
MluCI	AATT	4 cut(s)	39, 47, 128, 447
MluNI	TGGCCA	1 cut(s)	374
MlyI	GAGTC	1 cut(s)	449
MnlI	CCTC	1 cut(s)	223
Mox20I	TGGCCA	1 cut(s)	374
Mph1103I	ATGCAT	1 cut(s)	529
MscI	TGGCCA	1 cut(s)	374
MseI	TTAA	3 cut(s)	5, 30, 44
MslI	CAYNNNNRTG	1 cut(s)	251
Msp20I	TGGCCA	1 cut(s)	374
MspI	CCGG	1 cut(s)	213
MspR9I	CCNGG	1 cut(s)	299
Mva1269I	GAATGC	1 cut(s)	529
MvaI	CCWGG	1 cut(s)	299
MwoI	GCNNNNNNNGC	1 cut(s)	371
NdeI	CATATG	2 cut(s)	529, 571
NdeII	GATC	4 cut(s)	123, 156, 325, 357
NlaIII	CATG	7 cut(s)	38, 179, 224, 309, 339, 482, 612
NlaIV	GGNNCC	2 cut(s)	24, 465
NmuCI	GTSAC	1 cut(s)	505
NsiI	ATGCAT	1 cut(s)	529
NspI	RCATGY	3 cut(s)	309, 339, 612
PagI	TCATGA	2 cut(s)	34, 220
PciI	ACATGT	2 cut(s)	335, 608
PctI	GAATGC	1 cut(s)	529
PfeI	GAWTC	1 cut(s)	397
PflMI	CCANNNNNTGG	1 cut(s)	425
PkrI	GCNGC	2 cut(s)	304, 443
PleI	GAGTC	1 cut(s)	449
PpsI	GAGTC	1 cut(s)	449
PscI	ACATGT	2 cut(s)	335, 608
Psp6I	CCWGG	1 cut(s)	297
PspGI	CCWGG	1 cut(s)	297
PspN4I	GGNNCC	2 cut(s)	24, 465
PspPI	GGNCC	2 cut(s)	179, 295
PsuI	RGATCY	2 cut(s)	123, 325
RsaI	GTAC	4 cut(s)	24, 57, 310, 594
RsaNI	GTAC	4 cut(s)	23, 56, 309, 593
RseI	CAYNNNNRTG	1 cut(s)	251
SaqAI	TTAA	3 cut(s)	5, 30, 44
SatI	GCNGC	2 cut(s)	303, 442
Sau3AI	GATC	4 cut(s)	123, 156, 325, 357
Sau96I	GGNCC	2 cut(s)	179, 295
ScaI	AGTACT	1 cut(s)	57
SchI	GAGTC	1 cut(s)	449
ScrFI	CCNGG	1 cut(s)	299
SduI	GDGCHC	1 cut(s)	258
SetI	ASST	6 cut(s)	114, 189, 234, 518, 553, 564
SfaNI	GCATC	2 cut(s)	102, 551
SfcI	CTRYAG	1 cut(s)	546
SinI	GGWCC	2 cut(s)	179, 295
SmiMI	CAYNNNNRTG	1 cut(s)	251
Sse9I	AATT	4 cut(s)	39, 47, 128, 447
SsiI	CCGC	1 cut(s)	244
SspMI	CTAG	1 cut(s)	53
StyD4I	CCNGG	1 cut(s)	297
StyI	CCWWGG	1 cut(s)	419
TaaI	ACNGT	6 cut(s)	27, 60, 148, 167, 253, 260
TasI	AATT	4 cut(s)	39, 47, 128, 447
TatI	WGTACW	2 cut(s)	55, 308
TfiI	GAWTC	1 cut(s)	397
Tru1I	TTAA	3 cut(s)	5, 30, 44
Tru9I	TTAA	3 cut(s)	5, 30, 44
TscAI	CASTG	1 cut(s)	258
TseFI	GTSAC	1 cut(s)	505
TseI	GCWGC	2 cut(s)	302, 441
Tsp45I	GTSAC	1 cut(s)	505
TspDTI	ATGAA	4 cut(s)	51, 237, 404, 558
TspGWI	ACGGA	2 cut(s)	591, 610
TspRI	CASTG	1 cut(s)	258
Van91I	CCANNNNNTGG	1 cut(s)	425
VneI	GTGCAC	1 cut(s)	254
VpaK11BI	GGWCC	2 cut(s)	179, 295
XapI	RAATTY	3 cut(s)	39, 47, 447
XceI	RCATGY	3 cut(s)	309, 339, 612
XmiI	GTMKAC	1 cut(s)	143
XspI	CTAG	1 cut(s)	53
ZrmI	AGTACT	1 cut(s)	57
Zsp2I	ATGCAT	1 cut(s)	529

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.