FvH4_7g29410

Pentatricopeptide repeat-containing protein At3g29230-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0014806
Physical Location & Seq
Reverse (-)
21640141 .. 21642490
2350 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g29410.t1

Sequence Viewer

Length: 1965 bp
ATGGAGTATCCCAATCTCGTGTTTTCTCAATTGGGTCCTCAGTTGAGTAATAACATCATGATTCAAAATGCCATGATTAGAGGATATGATGGAAATGGGTTATTTGAGCAGTGTCTCCACCTTTTCGATGAAATGCCACACAGAGGACTCAAACCCCATAACTTTACTTACCCATATGTGTTGAACTCGTGTTCTAAATTGGGTTGGTTCCGAAAAGGCAAACAAGTCCACTGCCGCATTGTAAAGGGTGGGTTTGAGTCCCATCCATCAGTTGTTCATGCCCTTTTCCATTTATATGTCAAAATGGTGGATTTGAATGATGCCCGCAAGGTGTTCGATGAAATGTATGTGAAGACTATCGGATTATGGAACCGCATGATTTCGCTCTATGTGAATGCTTGTGATGTTCAGAGTGCTAGGAAGCTGTTTGATGTTATGCCTGAAAGGGACATTGTGTCATGGAATTCAATGATCACCGGCTACGCTGAAGTAAGGGATGTAGGCAACGCGAGAGATTTGTTTGAGCGGATGGGCGAGAAGGATGTTGTGTCATGGACATTAATGATCAGAGTGTATGCTGATGCAGGTGACCTTGTCACAGCGAGAAAGATGTTTGAGACAATGCCTTGCAAGAATGTAGTTTCATGGAACTCTATGATTTCGTGTTACACCCAGCATGGACAACATGAAGAAGCATTGAATCTCTTTGTCCAAATGCAATCAAGAAGTGAAGTACCGGATAATTACACGTTTGTTTCTGTATTATCTGCTTGTTCGCAGTTGGGTGCTTTAGAATTCGGAAAGTGGATACACTACTTGATTGAAGACTGGTCTCAGTTTGGAGCCATTTTGGGGACTGCTCTTGTGGATATGTATGCAAAGTGCGGGGACATAAATAGAGCTTTCACACTGTTTATCAAGATGGGAGAGAGGGATGTGTTTTGTTGGAATGTTATGATCAGGTCTGTAGCTATCAACGGAAGAACAGAGGACGCTGTCAAGATGTACTCATTGATGCAAAAGAAAGGGTTGAGGCCGAATGACTTCACGTTCACCGCTGCTCTCTTTGCTTGTAGCCATGGAGGCTTAACTAAAGAAGGTGAAAGAATCTTCTATTCGATGAAGAAGGAATTTGGGGTTGAACCTAAGCTCGAACATTATGGCTGCATAATCGACCTACTGAGCCGAAATGGTCAGTTGGAGGAAGCAGTACGTCTGGTTAGGGAAATGCCGTATAAGCCCGACATAGCAACATGGGGATCTTTGCTTGGCGGTTGCAGAGAAAGAGGTCACCTCAAGTTGGCGGAGGAAGTGATAGAGAAGGCTACAGAGTTGGAAGCAAATGAATCAGGAGTTTATGTGCTCTTGTCTAACATGCATGCCTCAGTGGGGCAATGGCCGGAGGCTCAAAGTGCAAGAGAGAAGATGGAAGAAAAGAGAATCTGGAAGAACACAGGGCATAGTAATCAAGCAAAGCATTGGCTTCAGCTACGCCAACTAGTATTTCACGCTCAGCCAGCTTTCCTTCCCCCACCACGTAGGCTGCCGGCGCTGAGAGCTCAGGCCAGTGGAGATGGCGGTGTTGACGTGGCTGTGAATCAGGGTAGTAATAACCAAGGGACTCAAATGGAGAAGATGCCTAGTGCTAGAAGAGACCCCTTGTCGCTAATGAGAACAATGCGCCACATGCTGGACACAATGAACCGCATGCCAGGACTCTCTAAAGAGGATGTCAAGGTGTCCATTGTGGATGATGCGCTTGTTATGAAGGGTGGGCAAAACAAGGAAGAGAACAAGGATGATGCATGGTCTAGTAGGAGCTGCAGTTTCTACAACACACGCCTTCAGCTTCCAGATAACTATGACAAGAGCAAAATGAACTCAGAGCTCAAGAATGGTGTTCTCTACATTGCCACTCCTAAGACCAAAGTGGAGCGCAAGGTCGTTGATGTAGAAATCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

655

Amino Acids

74.54

Weight (kDa)

8.26

Isoelectric Point (pI)

44.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 18 - 66 4e-08 PPR repeat family
PPR_2 PF13041 211 - 259 1e-13 PPR repeat family
PPR PF01535 214 - 242 7.4e-09 PPR repeat
PPR_2 PF13041 311 - 358 2.6e-11 PPR repeat family
E_motif PF20431 432 - 488 3.4e-08 E motif
HSP20 PF00011 569 - 653 2.7e-19 Hsp20/alpha crystallin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014806)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g29410
malus_domestica MD01G1200000.v1.1 MD07G1267900.v1.1
prunus_persica Prupe.2G293600_v2.0.a1
pyrus_communis pycom01g21010 pycom07g24550
rosa_chinensis RchiOBHm_Chr1g0377181 RchiOBHm_Chr1g0377191
rosa_laevigata RLG00000026538
rosa_multiflora Rmu_ssc0000155.1_g000013 Rmu_ssc0000155.1_g000014
rosa_roxburghii Rroxscaffold_4G00281400
rosa_rugosa Rorug01G0401900
rosa_samantha Rh1AG419300 Rh1BG378400 Rh1CG392400
rosa_wichuraiana Rw1G036780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 575
Acc36I ACCTGC 1 cut(s) 575
AccB7I CCANNNNNTGG 1 cut(s) 1690
AccBSI CCGCTC 1 cut(s) 526
AccII CGCG 1 cut(s) 509
AclWI GGATC 1 cut(s) 1267
AcoI YGGCCR 1 cut(s) 1397
AcsI RAATTY 3 cut(s) 463, 794, 1130
AcuI CTGAAG 3 cut(s) 507, 1469, 1829
AfaI GTAC 3 cut(s) 735, 1007, 1212
AfiI CCNNNNNNNGG 5 cut(s) 143, 852, 1300, 1389, 1690
AflIII ACRYGT 1 cut(s) 747
AgsI TTSAA 7 cut(s) 65, 184, 316, 468, 700, 824, 1142
AhdI GACNNNNNGTC 2 cut(s) 454, 1660
AhlI ACTAGT 1 cut(s) 1498
AjiI CACGTC 1 cut(s) 1588
AjnI CCWGG 1 cut(s) 1711
AjuI GAANNNNNNNTTGG 2 cut(s) 1488, 1520
Alw21I GWGCWC 3 cut(s) 1365, 1561, 1890
Alw26I GTCTC 4 cut(s) 119, 611, 837, 1647
AlwI GGATC 1 cut(s) 1267
AoxI GGCC 3 cut(s) 1034, 1397, 1563
ApeKI GCWGC 4 cut(s) 1058, 1164, 1543, 1821
ApoI RAATTY 3 cut(s) 463, 794, 1130
AseI ATTAAT 1 cut(s) 560
Asp700I GAANNNNTTC 1 cut(s) 1043
AspLEI GCGC 4 cut(s) 1552, 1683, 1759, 1938
AspS9I GGNCC 1 cut(s) 35
AsuHPI GGTGA 5 cut(s) 466, 599, 1045, 1112, 1283
AvaII GGWCC 1 cut(s) 35
BanII GRGCYC 2 cut(s) 1561, 1890
BauI CACGAG 2 cut(s) 17, 187
BbsI GAAGAC 2 cut(s) 359, 831
Bbv12I GWGCWC 3 cut(s) 1365, 1561, 1890
BbvI GCAGC 4 cut(s) 1045, 1151, 1530, 1808
BccI CCATC 7 cut(s) 83, 270, 274, 523, 916, 1420, 1568
BceAI ACGGC 1 cut(s) 1216
BcgI CGANNNNNNTGC 2 cut(s) 316, 350
BciT130I CCWGG 1 cut(s) 1713
BciVI GTATCC 2 cut(s) 18, 801
BclI TGATCA 3 cut(s) 471, 564, 957
BcoDI GTCTC 4 cut(s) 119, 611, 837, 1647
BcuI ACTAGT 1 cut(s) 1498
BfaI CTAG 5 cut(s) 417, 1499, 1641, 1647, 1812
BfmI CTRYAG 3 cut(s) 966, 1326, 1822
BfoI RGCGCY 1 cut(s) 1553
BfuAI ACCTGC 1 cut(s) 575
BfuI GTATCC 2 cut(s) 18, 801
BglI GCCNNNNNGGC 1 cut(s) 1083
BisI GCNGC 5 cut(s) 235, 1059, 1165, 1544, 1822
BlpI GCTNAGC 1 cut(s) 1512
BlsI GCNGC 5 cut(s) 236, 1060, 1166, 1545, 1823
Bme1390I CCNGG 1 cut(s) 1713
Bme18I GGWCC 1 cut(s) 35
BmeRI GACNNNNNGTC 2 cut(s) 454, 1660
BmgBI CACGTC 1 cut(s) 1588
BmgT120I GGNCC 1 cut(s) 35
BmiI GGNNCC 4 cut(s) 36, 209, 371, 844
BmrFI CCNGG 1 cut(s) 1713
BmsI GCATC 6 cut(s) 310, 571, 1005, 1626, 1744, 1792
BpiI GAAGAC 2 cut(s) 359, 831
BplI GAGNNNNNCTC 2 cut(s) 1278, 1310
Bpu10I CCTNAGC 2 cut(s) 1146, 1560
Bpu1102I GCTNAGC 1 cut(s) 1512
BpuEI CTTGAG 2 cut(s) 1280, 1874
BsaAI YACGTR 1 cut(s) 1538
BsaI GGTCTC 2 cut(s) 837, 1647
BsaJI CCNNGG 2 cut(s) 1078, 1615
BsaWI WCCGGW 1 cut(s) 736
BsaXI ACNNNNNCTCC 4 cut(s) 1344, 1374, 1810, 1840
Bsc4I CCNNNNNNNGG 5 cut(s) 143, 852, 1300, 1389, 1690
Bse118I RCCGGY 2 cut(s) 476, 1546
Bse1I ACTGG 2 cut(s) 833, 1566
Bse3DI GCAATG 2 cut(s) 1400, 1908
BseBI CCWGG 1 cut(s) 1713
BseDI CCNNGG 2 cut(s) 1078, 1615
BseGI GGATG 8 cut(s) 262, 502, 534, 547, 940, 1735, 1756, 1804
BseLI CCNNNNNNNGG 5 cut(s) 143, 852, 1300, 1389, 1690
BseMI GCAATG 2 cut(s) 1400, 1908
BseMII CTCAG 8 cut(s) 53, 848, 1172, 1398, 1526, 1544, 1574, 1896
BseNI ACTGG 2 cut(s) 833, 1566
BseXI GCAGC 4 cut(s) 1045, 1151, 1530, 1808
BseYI CCCAGC 1 cut(s) 672
Bsh1236I CGCG 1 cut(s) 509
BshFI GGCC 3 cut(s) 1036, 1399, 1565
BsiHKAI GWGCWC 3 cut(s) 1365, 1561, 1890
BsiSI CCGG 4 cut(s) 477, 737, 1400, 1547
BslFI GGGAC 5 cut(s) 244, 461, 868, 902, 1633
BslI CCNNNNNNNGG 5 cut(s) 143, 852, 1300, 1389, 1690
BsmAI GTCTC 4 cut(s) 119, 611, 837, 1647
BsmFI GGGAC 5 cut(s) 244, 461, 868, 902, 1633
BsmI GAATGC 1 cut(s) 400
BsnI GGCC 3 cut(s) 1036, 1399, 1565
Bso31I GGTCTC 2 cut(s) 837, 1647
Bsp1286I GDGCHC 3 cut(s) 1365, 1561, 1890
Bsp143I GATC 4 cut(s) 471, 564, 957, 1259
Bsp1720I GCTNAGC 1 cut(s) 1512
Bsp19I CCATGG 1 cut(s) 1078
BspANI GGCC 3 cut(s) 1036, 1399, 1565
BspCNI CTCAG 8 cut(s) 52, 847, 1173, 1397, 1525, 1545, 1573, 1895
BspFNI CGCG 1 cut(s) 509
BspHI TCATGA 1 cut(s) 57
BspLI GGNNCC 4 cut(s) 36, 209, 371, 844
BspMAI CTGCAG 1 cut(s) 1826
BspMI ACCTGC 1 cut(s) 575
BspPI GGATC 1 cut(s) 1267
BspTNI GGTCTC 2 cut(s) 837, 1647
BsrBI CCGCTC 1 cut(s) 526
BsrDI GCAATG 2 cut(s) 1400, 1908
BsrFI RCCGGY 2 cut(s) 476, 1546
BsrI ACTGG 2 cut(s) 833, 1566
BssAI RCCGGY 2 cut(s) 476, 1546
BssECI CCNNGG 2 cut(s) 1078, 1615
BssMI GATC 4 cut(s) 471, 564, 957, 1259
BssSI CACGAG 2 cut(s) 17, 187
BssT1I CCWWGG 2 cut(s) 1078, 1615
Bst2BI CACGAG 2 cut(s) 17, 187
Bst2UI CCWGG 1 cut(s) 1713
Bst4CI ACNGT 1 cut(s) 912
Bst6I CTCTTC 2 cut(s) 1645, 1782
BstBAI YACGTR 1 cut(s) 1538
BstC8I GCNNGC 5 cut(s) 325, 1380, 1518, 1548, 1709
BstDSI CCRYGG 1 cut(s) 1078
BstEII GGTNACC 2 cut(s) 587, 1289
BstF5I GGATG 8 cut(s) 262, 502, 534, 547, 940, 1735, 1756, 1804
BstFNI CGCG 1 cut(s) 509
BstH2I RGCGCY 1 cut(s) 1553
BstHHI GCGC 4 cut(s) 1552, 1683, 1759, 1938
BstKTI GATC 4 cut(s) 474, 567, 960, 1262
BstMAI GTCTC 4 cut(s) 119, 611, 837, 1647
BstMBI GATC 4 cut(s) 471, 564, 957, 1259
BstMWI GCNNNNNNNGC 8 cut(s) 1067, 1083, 1237, 1412, 1517, 1549, 1556, 1687
BstNI CCWGG 1 cut(s) 1713
BstNSI RCATGY 4 cut(s) 1378, 1382, 1690, 1711
BstPI GGTNACC 2 cut(s) 587, 1289
BstSCI CCNGG 1 cut(s) 1711
BstSFI CTRYAG 3 cut(s) 966, 1326, 1822
BstUI CGCG 1 cut(s) 509
BstV1I GCAGC 4 cut(s) 1045, 1151, 1530, 1808
BstV2I GAAGAC 2 cut(s) 359, 831
BstX2I RGATCY 1 cut(s) 1259
BstYI RGATCY 1 cut(s) 1259
BsuI GTATCC 2 cut(s) 18, 801
BsuRI GGCC 3 cut(s) 1036, 1399, 1565
BtgI CCRYGG 1 cut(s) 1078
BtrI CACGTC 1 cut(s) 1588
BtsCI GGATG 8 cut(s) 262, 502, 534, 547, 940, 1735, 1756, 1804
BtsI GCAGTG 2 cut(s) 116, 229
BtsIMutI CAGTG 5 cut(s) 116, 229, 908, 1392, 1573
BveI ACCTGC 1 cut(s) 575
Cac8I GCNNGC 5 cut(s) 325, 1380, 1518, 1548, 1709
CciI TCATGA 1 cut(s) 57
CfoI GCGC 4 cut(s) 1552, 1683, 1759, 1938
Cfr10I RCCGGY 2 cut(s) 476, 1546
Cfr13I GGNCC 1 cut(s) 35
CseI GACGC 1 cut(s) 1001
Csp6I GTAC 3 cut(s) 734, 1006, 1211
CviQI GTAC 3 cut(s) 734, 1006, 1211
DpnI GATC 4 cut(s) 473, 566, 959, 1261
DpnII GATC 4 cut(s) 471, 564, 957, 1259
DriI GACNNNNNGTC 2 cut(s) 454, 1660
EaeI YGGCCR 1 cut(s) 1397
Eam1104I CTCTTC 2 cut(s) 1645, 1782
Eam1105I GACNNNNNGTC 2 cut(s) 454, 1660
EarI CTCTTC 2 cut(s) 1645, 1782
EciI GGCGGA 1 cut(s) 1319
Ecl136II GAGCTC 2 cut(s) 1559, 1888
Eco130I CCWWGG 2 cut(s) 1078, 1615
Eco24I GRGCYC 2 cut(s) 1561, 1890
Eco31I GGTCTC 2 cut(s) 837, 1647
Eco47I GGWCC 1 cut(s) 35
Eco53kI GAGCTC 2 cut(s) 1559, 1888
Eco57I CTGAAG 3 cut(s) 507, 1469, 1829
Eco91I GGTNACC 2 cut(s) 587, 1289
EcoICRI GAGCTC 2 cut(s) 1559, 1888
EcoO109I RGGNCCY 1 cut(s) 35
EcoO65I GGTNACC 2 cut(s) 587, 1289
EcoRI GAATTC 2 cut(s) 463, 794
EcoRII CCWGG 1 cut(s) 1711
EcoT14I CCWWGG 2 cut(s) 1078, 1615
EcoT22I ATGCAT 2 cut(s) 1380, 1807
EcoT38I GRGCYC 2 cut(s) 1561, 1890
ErhI CCWWGG 2 cut(s) 1078, 1615
FaqI GGGAC 5 cut(s) 244, 461, 868, 902, 1633
FauI CCCGC 2 cut(s) 332, 878
FauNDI CATATG 1 cut(s) 175
FbaI TGATCA 3 cut(s) 471, 564, 957
Fnu4HI GCNGC 5 cut(s) 235, 1059, 1165, 1544, 1822
FokI GGATG 8 cut(s) 249, 509, 541, 554, 947, 1742, 1763, 1811
FriOI GRGCYC 2 cut(s) 1561, 1890
Fsp4HI GCNGC 5 cut(s) 235, 1059, 1165, 1544, 1822
FspBI CTAG 5 cut(s) 417, 1499, 1641, 1647, 1812
GlaI GCGC 4 cut(s) 1551, 1682, 1758, 1937
GluI GCNGC 5 cut(s) 235, 1059, 1165, 1544, 1822
GsaI CCCAGC 1 cut(s) 676
HaeII RGCGCY 1 cut(s) 1553
HaeIII GGCC 3 cut(s) 1036, 1399, 1565
HapII CCGG 4 cut(s) 477, 737, 1400, 1547
HgaI GACGC 1 cut(s) 1001
HhaI GCGC 4 cut(s) 1552, 1683, 1759, 1938
Hin6I GCGC 4 cut(s) 1550, 1681, 1757, 1936
HinP1I GCGC 4 cut(s) 1550, 1681, 1757, 1936
HincII GTYRAC 1 cut(s) 1585
HindII GTYRAC 1 cut(s) 1585
HpaII CCGG 4 cut(s) 477, 737, 1400, 1547
HphI GGTGA 5 cut(s) 466, 599, 1045, 1112, 1283
Hpy166II GTNNAC 3 cut(s) 229, 1053, 1585
Hpy188I TCNGA 6 cut(s) 212, 362, 411, 569, 800, 1885
Hpy188III TCNNGA 8 cut(s) 58, 723, 919, 1000, 1350, 1444, 1853, 1891
Hpy8I GTNNAC 3 cut(s) 229, 1053, 1585
HpyAV CCTTC 7 cut(s) 532, 1091, 1120, 1315, 1535, 1762, 1853
HpyCH4III ACNGT 1 cut(s) 912
HpyCH4IV ACGT 5 cut(s) 749, 1049, 1213, 1537, 1587
HpyF10VI GCNNNNNNNGC 8 cut(s) 1067, 1083, 1237, 1412, 1517, 1549, 1556, 1687
HpySE526I ACGT 5 cut(s) 749, 1049, 1213, 1537, 1587
HspAI GCGC 4 cut(s) 1550, 1681, 1757, 1936
KroI GCCGGC 1 cut(s) 1546
KroNI GCCGGC 1 cut(s) 1548
Ksp22I TGATCA 3 cut(s) 471, 564, 957
Kzo9I GATC 4 cut(s) 471, 564, 957, 1259
LmnI GCTCC 3 cut(s) 842, 1818, 1933
Lsp1109I GCAGC 4 cut(s) 1045, 1151, 1530, 1808
LweI GCATC 6 cut(s) 310, 571, 1005, 1626, 1744, 1792
MaeI CTAG 5 cut(s) 417, 1499, 1641, 1647, 1812
MaeII ACGT 5 cut(s) 749, 1049, 1213, 1537, 1587
MaeIII GTNAC 4 cut(s) 587, 595, 665, 1289
MalI GATC 4 cut(s) 473, 566, 959, 1261
MbiI CCGCTC 1 cut(s) 526
MboI GATC 4 cut(s) 471, 564, 957, 1259
MfeI CAATTG 1 cut(s) 29
MflI RGATCY 1 cut(s) 1259
MhlI GDGCHC 3 cut(s) 1365, 1561, 1890
MluCI AATT 6 cut(s) 29, 197, 463, 742, 794, 1130
MlyI GAGTC 4 cut(s) 141, 266, 1615, 1710
MmeI TCCRAC 3 cut(s) 926, 1179, 1314
Mph1103I ATGCAT 2 cut(s) 1380, 1807
MroNI GCCGGC 1 cut(s) 1546
MroXI GAANNNNTTC 1 cut(s) 1043
MseI TTAA 2 cut(s) 560, 1088
MslI CAYNNNNRTG 1 cut(s) 294
MspA1I CMGCKG 1 cut(s) 1058
MspI CCGG 4 cut(s) 477, 737, 1400, 1547
MspR9I CCNGG 1 cut(s) 1713
MunI CAATTG 1 cut(s) 29
Mva1269I GAATGC 1 cut(s) 400
MvaI CCWGG 1 cut(s) 1713
MvnI CGCG 1 cut(s) 509
MwoI GCNNNNNNNGC 8 cut(s) 1067, 1083, 1237, 1412, 1517, 1549, 1556, 1687
NaeI GCCGGC 1 cut(s) 1548
NcoI CCATGG 1 cut(s) 1078
NdeI CATATG 1 cut(s) 175
NdeII GATC 4 cut(s) 471, 564, 957, 1259
NgoMIV GCCGGC 1 cut(s) 1546
NlaIV GGNNCC 4 cut(s) 36, 209, 371, 844
NmuCI GTSAC 3 cut(s) 587, 595, 1289
NsiI ATGCAT 2 cut(s) 1380, 1807
NspI RCATGY 4 cut(s) 1378, 1382, 1690, 1711
PaeI GCATGC 2 cut(s) 1382, 1711
PagI TCATGA 1 cut(s) 57
PaqCI CACCTGC 1 cut(s) 575
PctI GAATGC 1 cut(s) 400
PdiI GCCGGC 1 cut(s) 1548
PdmI GAANNNNTTC 1 cut(s) 1043
PfeI GAWTC 6 cut(s) 61, 700, 1107, 1346, 1440, 1597
PflFI GACNNNGTC 2 cut(s) 593, 995
PflMI CCANNNNNTGG 1 cut(s) 1690
PkrI GCNGC 5 cut(s) 236, 1060, 1166, 1545, 1823
PleI GAGTC 4 cut(s) 141, 265, 1615, 1710
PpsI GAGTC 4 cut(s) 141, 265, 1615, 1710
Ppu21I YACGTR 1 cut(s) 1538
PpuMI RGGWCCY 1 cut(s) 35
PshBI ATTAAT 1 cut(s) 560
Psp124BI GAGCTC 2 cut(s) 1561, 1890
Psp5II RGGWCCY 1 cut(s) 35
Psp6I CCWGG 1 cut(s) 1711
PspEI GGTNACC 2 cut(s) 587, 1289
PspFI CCCAGC 1 cut(s) 672
PspGI CCWGG 1 cut(s) 1711
PspN4I GGNNCC 4 cut(s) 36, 209, 371, 844
PspPI GGNCC 1 cut(s) 35
PspPPI RGGWCCY 1 cut(s) 35
PstI CTGCAG 1 cut(s) 1826
PsuI RGATCY 1 cut(s) 1259
PsyI GACNNNGTC 2 cut(s) 593, 995
RsaI GTAC 3 cut(s) 735, 1007, 1212
RsaNI GTAC 3 cut(s) 734, 1006, 1211
RseI CAYNNNNRTG 1 cut(s) 294
SacI GAGCTC 2 cut(s) 1561, 1890
SaqAI TTAA 2 cut(s) 560, 1088
SatI GCNGC 5 cut(s) 235, 1059, 1165, 1544, 1822
Sau3AI GATC 4 cut(s) 471, 564, 957, 1259
Sau96I GGNCC 1 cut(s) 35
SchI GAGTC 4 cut(s) 141, 266, 1615, 1710
ScrFI CCNGG 1 cut(s) 1713
SduI GDGCHC 3 cut(s) 1365, 1561, 1890
SfaNI GCATC 6 cut(s) 310, 571, 1005, 1626, 1744, 1792
SfcI CTRYAG 3 cut(s) 966, 1326, 1822
SinI GGWCC 1 cut(s) 35
SmiMI CAYNNNNRTG 1 cut(s) 294
SmlI CTYRAG 2 cut(s) 1295, 1889
SmoI CTYRAG 2 cut(s) 1295, 1889
SpeI ACTAGT 1 cut(s) 1498
SphI GCATGC 2 cut(s) 1382, 1711
Sse9I AATT 6 cut(s) 29, 197, 463, 742, 794, 1130
SspMI CTAG 5 cut(s) 417, 1499, 1641, 1647, 1812
SstI GAGCTC 2 cut(s) 1561, 1890
StyD4I CCNGG 1 cut(s) 1711
StyI CCWWGG 2 cut(s) 1078, 1615
TaaI ACNGT 1 cut(s) 912
TaiI ACGT 5 cut(s) 752, 1052, 1216, 1540, 1590
TaqI TCGA 5 cut(s) 126, 336, 1118, 1152, 1173
TasI AATT 6 cut(s) 29, 197, 463, 742, 794, 1130
TatI WGTACW 1 cut(s) 1005
TauI GCSGC 1 cut(s) 237
TfiI GAWTC 6 cut(s) 61, 700, 1107, 1346, 1440, 1597
Tru1I TTAA 2 cut(s) 560, 1088
Tru9I TTAA 2 cut(s) 560, 1088
TscAI CASTG 5 cut(s) 116, 236, 915, 1392, 1573
TseFI GTSAC 3 cut(s) 587, 595, 1289
TseI GCWGC 4 cut(s) 1058, 1164, 1543, 1821
Tsp45I GTSAC 3 cut(s) 587, 595, 1289
TspGWI ACGGA 1 cut(s) 993
TspRI CASTG 5 cut(s) 116, 236, 915, 1392, 1573
Tth111I GACNNNGTC 2 cut(s) 593, 995
Van91I CCANNNNNTGG 1 cut(s) 1690
VpaK11BI GGWCC 1 cut(s) 35
VspI ATTAAT 1 cut(s) 560
XapI RAATTY 3 cut(s) 463, 794, 1130
XceI RCATGY 4 cut(s) 1378, 1382, 1690, 1711
XmnI GAANNNNTTC 1 cut(s) 1043
XspI CTAG 5 cut(s) 417, 1499, 1641, 1647, 1812
Zsp2I ATGCAT 2 cut(s) 1380, 1807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.