RLG00000026538

Pentatricopeptide repeat-containing protein At3g29230-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0014806
Physical Location & Seq
Forward (+)
3685863 .. 3687606
1744 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026538

Sequence Viewer

Length: 1683 bp
ATGGGCATGGGCATGGCTTATTCCTTGGAGCTTAAACTCTCAAAATTACTGCCACAATGCACATTCAGACAGTTGAAGCAAATACATGCCCTCATTCTCACTACCTCACTCAACCAAGACATCCAAACTTTCTCCAAATTTCTCCGGCGGAGCACGGAGTATGGAGCAATGGAATATCCCAGTCTCATATATTCCCAACTGGGTGCTCAGTTCAGTAATAACATCATGATTCAAAATGCTATGATTAGAGGGTATGGTGGAAATGGTCTCTTTGAGCAATGCCTGCACCTGTTCGATGAAATGCTTCAAAGAGGACTCAAACCCCATAACTTCACTTACCCATATGTGTTGAGCTCGTGTTCTAAACTGGGTTGGTTCCGAAAAGGCAAACAAGTGCATTGCCGGATTGTAAAGGATGGGTTTGAGTCCAATCTATCAGTTGCTAATGCCCTTTTCCATTTATACGTTAAAATGGTGGATTTTGGTGACCCGGGTGCTGAAAACTTAAGGAATTTGAATGATGCCCGCAAGGTGTTTGATAAAATGTCTGTGAAAACTATCGAATTATGGAACCGCATGATTTCACATTATGTGAGTGCTTGTGATGTTCAGAGTGCAAGGAAGCTGTTTGATGTCATGCCTGAAAGGGACATTGTTTCGTGGAATTCGATGATCACCGGCTACGCTGAAGTAAGGGATGCAGGCAATGCGAGAGATTTGTTTGAGCGGATGCCCGAGAAGGATGTTGTATCATGGACAATAATGATCGGAGTGTACGCCGCTGCAGGAGACCTTATGACAGCGAGAAAGTTTTTCGAGACAATGCCTTGCAAGAATGTGGTTTCTTGGAACTCTATGATCGCTAGTTACACCCAGCATGGACAACTTGAAGAAGCATTGGATCTCTTTGTCCAAATGCAATCGGGTGGTGAAGTTCCGGACAAATACACGTTTGTTTCTGTTCTATCGGCTTGTTCTCAGTTGGGTGCTTTAGAATTTGGAAAGTGGATACACTACTTGATAGAAGACTGGTCTCGGTTTGGAGCCATTTTGGGGACTGCCCTTATCGATATGTATGCAAAGTGCGGCGATATAAATAGAGCTTTCACACTTTTTATTAAGATGGGAAAGAGGGATGTATTTTGTTGGAATGTTATGATTAGATCTGTAGCTATCCACGGAAGAACAGAAGACGCCATCAAGATGTACTCATTGATGCCAAAAAAAGGGTTGAAGCCGAATGACTTCACCTTCACTGCTGCTCTATTTGCTTGTAGCCATGGAGGCTTAGTAAAGGAAGGTGAAAGAATCTTCAATTCCATGGAGAGGGATTTTGGTGTTGAACCAAAACTCCAGCATTATGGCTGCATAATTGACCTACTGAGCCGAAACGGTCAGTTGGAGGAAGCAGTACGTCTATTTAAGGAAATGCCGTATAAGCCTGACATAGCAATATGGGGAGCTTTGCTTGGCGGTTGCAGAGATAGAAGTCACCTTAAATTGGCAGAGGAAGTGATAGAGAAAGCTACAGAGTTGGAGGCAAATGAATCAGGAGTTTATGTGCTCTTGTTTAACATGCATGCCTCAGTAGGGCAATGGCCGGAGGCTCAAAGTGCAAGAGAAATGATGGAAGAAATGAAAATTTGGAAGAACACAGGGCATAGTAATGTTTATGCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

561

Amino Acids

63.64

Weight (kDa)

7.2

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 74 - 122 3.1e-09 PPR repeat family
PPR PF01535 79 - 106 5.7e-06 PPR repeat
PPR_2 PF13041 278 - 326 2.1e-13 PPR repeat family
PPR PF01535 281 - 310 1.3e-08 PPR repeat
PPR_2 PF13041 378 - 425 2.6e-11 PPR repeat family
E_motif PF20431 498 - 557 8.1e-07 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014806)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g29410
malus_domestica MD01G1200000.v1.1 MD07G1267900.v1.1
prunus_persica Prupe.2G293600_v2.0.a1
pyrus_communis pycom01g21010 pycom07g24550
rosa_chinensis RchiOBHm_Chr1g0377181 RchiOBHm_Chr1g0377191
rosa_laevigata RLG00000026538
rosa_multiflora Rmu_ssc0000155.1_g000013 Rmu_ssc0000155.1_g000014
rosa_roxburghii Rroxscaffold_4G00281400
rosa_rugosa Rorug01G0401900
rosa_samantha Rh1AG419300 Rh1BG378400 Rh1CG392400
rosa_wichuraiana Rw1G036780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 727
AccIII TCCGGA 1 cut(s) 937
AciI CCGC 7 cut(s) 148, 526, 574, 727, 780, 1086, 1473
AclWI GGATC 1 cut(s) 909
AcoI YGGCCR 1 cut(s) 1598
AcsI RAATTY 5 cut(s) 137, 511, 664, 995, 1641
AcuI CTGAAG 1 cut(s) 708
AcyI GRCGYC 1 cut(s) 1194
AfaI GTAC 3 cut(s) 776, 1208, 1413
AfiI CCNNNNNNNGG 5 cut(s) 1053, 1226, 1326, 1501, 1590
AflII CTTAAG 1 cut(s) 505
AflIII ACRYGT 1 cut(s) 948
AgsI TTSAA 8 cut(s) 76, 233, 308, 517, 890, 1234, 1315, 1343
AloI GAACNNNNNNTCC 2 cut(s) 1335, 1367
AluBI AGCT 7 cut(s) 31, 354, 625, 1103, 1172, 1463, 1526
AluI AGCT 7 cut(s) 31, 354, 625, 1103, 1172, 1463, 1526
Alw21I GWGCWC 4 cut(s) 155, 208, 356, 1566
Alw26I GTCTC 5 cut(s) 188, 272, 783, 812, 1038
AlwI GGATC 1 cut(s) 909
Ama87I CYCGRG 2 cut(s) 490, 734
Aor13HI TCCGGA 1 cut(s) 937
AoxI GGCC 1 cut(s) 1598
ApeKI GCWGC 3 cut(s) 782, 1259, 1365
ApoI RAATTY 5 cut(s) 137, 511, 664, 995, 1641
Asp700I GAANNNNTTC 2 cut(s) 303, 1244
AsuC2I CCSGG 2 cut(s) 491, 492
AsuHPI GGTGA 6 cut(s) 497, 667, 941, 1240, 1313, 1484
AvaI CYCGRG 2 cut(s) 490, 734
BanII GRGCYC 1 cut(s) 356
BauI CACGAG 1 cut(s) 355
BbsI GAAGAC 2 cut(s) 1032, 1197
Bbv12I GWGCWC 4 cut(s) 155, 208, 356, 1566
BbvI GCAGC 3 cut(s) 769, 1246, 1352
BccI CCATC 4 cut(s) 410, 1117, 1205, 1621
BceAI ACGGC 1 cut(s) 1417
BcgI CGANNNNNNTGC 2 cut(s) 1058, 1092
BciVI GTATCC 1 cut(s) 1002
BclI TGATCA 1 cut(s) 672
BcnI CCSGG 2 cut(s) 491, 492
BcoDI GTCTC 5 cut(s) 188, 272, 783, 812, 1038
BfaI CTAG 1 cut(s) 864
BfmI CTRYAG 3 cut(s) 783, 1167, 1527
BfrI CTTAAG 1 cut(s) 505
BfuI GTATCC 1 cut(s) 1002
BglI GCCNNNNNGGC 1 cut(s) 1284
BglII AGATCT 1 cut(s) 1163
BisI GCNGC 5 cut(s) 780, 783, 1087, 1260, 1366
BlsI GCNGC 5 cut(s) 781, 784, 1088, 1261, 1367
Bme1390I CCNGG 2 cut(s) 491, 492
BmeT110I CYCGRG 2 cut(s) 490, 734
BmiI GGNNCC 3 cut(s) 377, 572, 1045
BmrFI CCNGG 2 cut(s) 491, 492
BmrI ACTGGG 3 cut(s) 174, 209, 377
BmsI GCATC 4 cut(s) 511, 688, 720, 1206
BmuI ACTGGG 3 cut(s) 174, 209, 377
BpiI GAAGAC 2 cut(s) 1032, 1197
BpmI CTGGAG 1 cut(s) 1337
BpuMI CCSGG 2 cut(s) 491, 492
Bsa29I ATCGAT 1 cut(s) 1068
BsaHI GRCGYC 1 cut(s) 1194
BsaI GGTCTC 3 cut(s) 272, 783, 1038
BsaJI CCNNGG 5 cut(s) 24, 490, 1177, 1279, 1320
BsaWI WCCGGW 1 cut(s) 937
BsaXI ACNNNNNCTCC 6 cut(s) 1275, 1305, 1335, 1365, 1545, 1575
Bsc4I CCNNNNNNNGG 5 cut(s) 1053, 1226, 1326, 1501, 1590
Bse118I RCCGGY 1 cut(s) 677
Bse1I ACTGG 4 cut(s) 180, 204, 372, 1034
Bse3DI GCAATG 5 cut(s) 174, 284, 397, 712, 1601
BseAI TCCGGA 1 cut(s) 937
BseCI ATCGAT 1 cut(s) 1068
BseDI CCNNGG 5 cut(s) 24, 490, 1177, 1279, 1320
BseGI GGATG 6 cut(s) 120, 421, 703, 735, 748, 1141
BseLI CCNNNNNNNGG 5 cut(s) 1053, 1226, 1326, 1501, 1590
BseMI GCAATG 5 cut(s) 174, 284, 397, 712, 1601
BseMII CTCAG 4 cut(s) 221, 992, 1373, 1599
BseNI ACTGG 4 cut(s) 180, 204, 372, 1034
BseXI GCAGC 3 cut(s) 769, 1246, 1352
BseYI CCCAGC 1 cut(s) 873
BsgI GTGCAG 1 cut(s) 269
BshFI GGCC 1 cut(s) 1600
BshVI ATCGAT 1 cut(s) 1068
BsiHKAI GWGCWC 4 cut(s) 155, 208, 356, 1566
BsiHKCI CYCGRG 2 cut(s) 490, 734
BsiSI CCGG 6 cut(s) 145, 403, 491, 678, 938, 1601
BslFI GGGAC 2 cut(s) 662, 1069
BslI CCNNNNNNNGG 5 cut(s) 1053, 1226, 1326, 1501, 1590
BsmAI GTCTC 5 cut(s) 188, 272, 783, 812, 1038
BsmFI GGGAC 2 cut(s) 662, 1069
BsnI GGCC 1 cut(s) 1600
Bso31I GGTCTC 3 cut(s) 272, 783, 1038
BsoBI CYCGRG 2 cut(s) 490, 734
Bsp1286I GDGCHC 4 cut(s) 155, 208, 356, 1566
Bsp13I TCCGGA 1 cut(s) 937
Bsp143I GATC 5 cut(s) 672, 765, 858, 901, 1163
Bsp19I CCATGG 2 cut(s) 1279, 1320
BspACI CCGC 7 cut(s) 148, 526, 574, 727, 780, 1086, 1473
BspANI GGCC 1 cut(s) 1600
BspCNI CTCAG 4 cut(s) 220, 991, 1374, 1598
BspDI ATCGAT 1 cut(s) 1068
BspEI TCCGGA 1 cut(s) 937
BspHI TCATGA 1 cut(s) 225
BspLI GGNNCC 3 cut(s) 377, 572, 1045
BspMAI CTGCAG 1 cut(s) 787
BspPI GGATC 1 cut(s) 909
BspTI CTTAAG 1 cut(s) 505
BspTNI GGTCTC 3 cut(s) 272, 783, 1038
BsrBI CCGCTC 1 cut(s) 727
BsrDI GCAATG 5 cut(s) 174, 284, 397, 712, 1601
BsrFI RCCGGY 1 cut(s) 677
BsrI ACTGG 4 cut(s) 180, 204, 372, 1034
BssAI RCCGGY 1 cut(s) 677
BssECI CCNNGG 5 cut(s) 24, 490, 1177, 1279, 1320
BssMI GATC 5 cut(s) 672, 765, 858, 901, 1163
BssNI GRCGYC 1 cut(s) 1194
BssSI CACGAG 1 cut(s) 355
BssT1I CCWWGG 3 cut(s) 24, 1279, 1320
Bst2BI CACGAG 1 cut(s) 355
Bst4CI ACNGT 2 cut(s) 72, 1394
BstACI GRCGYC 1 cut(s) 1194
BstAFI CTTAAG 1 cut(s) 505
BstAPI GCANNNNNTGC 2 cut(s) 283, 707
BstC8I GCNNGC 4 cut(s) 284, 526, 703, 1581
BstDEI CTNAG 5 cut(s) 207, 978, 1288, 1382, 1585
BstDSI CCRYGG 3 cut(s) 1177, 1279, 1320
BstEII GGTNACC 1 cut(s) 485
BstF5I GGATG 6 cut(s) 120, 421, 703, 735, 748, 1141
BstKTI GATC 5 cut(s) 675, 768, 861, 904, 1166
BstMAI GTCTC 5 cut(s) 188, 272, 783, 812, 1038
BstMBI GATC 5 cut(s) 672, 765, 858, 901, 1163
BstMWI GCNNNNNNNGC 6 cut(s) 283, 707, 1268, 1284, 1438, 1613
BstNSI RCATGY 3 cut(s) 89, 1579, 1583
BstPI GGTNACC 1 cut(s) 485
BstSCI CCNGG 2 cut(s) 489, 490
BstSFI CTRYAG 3 cut(s) 783, 1167, 1527
BstV1I GCAGC 3 cut(s) 769, 1246, 1352
BstV2I GAAGAC 2 cut(s) 1032, 1197
BstX2I RGATCY 2 cut(s) 901, 1163
BstXI CCANNNNNNTGG 1 cut(s) 1361
BstYI RGATCY 2 cut(s) 901, 1163
Bsu15I ATCGAT 1 cut(s) 1068
BsuI GTATCC 1 cut(s) 1002
BsuRI GGCC 1 cut(s) 1600
BsuTUI ATCGAT 1 cut(s) 1068
BtgI CCRYGG 3 cut(s) 1177, 1279, 1320
BtsCI GGATG 6 cut(s) 120, 421, 703, 735, 748, 1141
BtsI GCAGTG 1 cut(s) 1254
BtsIMutI CAGTG 1 cut(s) 1254
Cac8I GCNNGC 4 cut(s) 284, 526, 703, 1581
CciI TCATGA 1 cut(s) 225
Cfr10I RCCGGY 1 cut(s) 677
Cfr9I CCCGGG 1 cut(s) 490
ClaI ATCGAT 1 cut(s) 1068
CseI GACGC 1 cut(s) 1202
Csp6I GTAC 3 cut(s) 775, 1207, 1412
CviQI GTAC 3 cut(s) 775, 1207, 1412
DdeI CTNAG 5 cut(s) 207, 978, 1288, 1382, 1585
DpnI GATC 5 cut(s) 674, 767, 860, 903, 1165
DpnII GATC 5 cut(s) 672, 765, 858, 901, 1163
EaeI YGGCCR 1 cut(s) 1598
EciI GGCGGA 1 cut(s) 163
Ecl136II GAGCTC 1 cut(s) 354
Eco130I CCWWGG 3 cut(s) 24, 1279, 1320
Eco24I GRGCYC 1 cut(s) 356
Eco31I GGTCTC 3 cut(s) 272, 783, 1038
Eco53kI GAGCTC 1 cut(s) 354
Eco57I CTGAAG 1 cut(s) 708
Eco88I CYCGRG 2 cut(s) 490, 734
Eco91I GGTNACC 1 cut(s) 485
EcoICRI GAGCTC 1 cut(s) 354
EcoO65I GGTNACC 1 cut(s) 485
EcoRI GAATTC 1 cut(s) 664
EcoT14I CCWWGG 3 cut(s) 24, 1279, 1320
EcoT22I ATGCAT 1 cut(s) 1581
EcoT38I GRGCYC 1 cut(s) 356
ErhI CCWWGG 3 cut(s) 24, 1279, 1320
FaqI GGGAC 2 cut(s) 662, 1069
FauI CCCGC 1 cut(s) 533
FauNDI CATATG 1 cut(s) 343
FbaI TGATCA 1 cut(s) 672
Fnu4HI GCNGC 5 cut(s) 780, 783, 1087, 1260, 1366
FokI GGATG 6 cut(s) 107, 428, 710, 742, 755, 1148
FriOI GRGCYC 1 cut(s) 356
Fsp4HI GCNGC 5 cut(s) 780, 783, 1087, 1260, 1366
FspBI CTAG 1 cut(s) 864
GluI GCNGC 5 cut(s) 780, 783, 1087, 1260, 1366
GsaI CCCAGC 1 cut(s) 877
GsuI CTGGAG 1 cut(s) 1337
HaeIII GGCC 1 cut(s) 1600
HapII CCGG 6 cut(s) 145, 403, 491, 678, 938, 1601
HgaI GACGC 1 cut(s) 1202
Hin1I GRCGYC 1 cut(s) 1194
HinfI GANTC 5 cut(s) 229, 315, 425, 1308, 1547
HpaII CCGG 6 cut(s) 145, 403, 491, 678, 938, 1601
HphI GGTGA 6 cut(s) 497, 667, 941, 1240, 1313, 1484
Hpy166II GTNNAC 1 cut(s) 775
Hpy188I TCNGA 4 cut(s) 68, 380, 612, 770
Hpy188III TCNNGA 6 cut(s) 226, 817, 938, 1201, 1551, 1680
Hpy8I GTNNAC 1 cut(s) 775
HpyAV CCTTC 3 cut(s) 733, 1261, 1292
HpyCH4III ACNGT 2 cut(s) 72, 1394
HpyCH4IV ACGT 3 cut(s) 465, 950, 1414
HpyF10VI GCNNNNNNNGC 6 cut(s) 283, 707, 1268, 1284, 1438, 1613
HpyF3I CTNAG 5 cut(s) 207, 978, 1288, 1382, 1585
HpySE526I ACGT 3 cut(s) 465, 950, 1414
Hsp92I GRCGYC 1 cut(s) 1194
Kpn2I TCCGGA 1 cut(s) 937
Ksp22I TGATCA 1 cut(s) 672
Kzo9I GATC 5 cut(s) 672, 765, 858, 901, 1163
LmnI GCTCC 5 cut(s) 28, 150, 164, 1043, 1460
Lsp1109I GCAGC 3 cut(s) 769, 1246, 1352
LweI GCATC 4 cut(s) 511, 688, 720, 1206
MaeI CTAG 1 cut(s) 864
MaeII ACGT 3 cut(s) 465, 950, 1414
MaeIII GTNAC 3 cut(s) 485, 866, 1490
MalI GATC 5 cut(s) 674, 767, 860, 903, 1165
MbiI CCGCTC 1 cut(s) 727
MboI GATC 5 cut(s) 672, 765, 858, 901, 1163
MboII GAAGA 7 cut(s) 902, 1037, 1194, 1202, 1303, 1643, 1660
MflI RGATCY 2 cut(s) 901, 1163
MhlI GDGCHC 4 cut(s) 155, 208, 356, 1566
MlyI GAGTC 2 cut(s) 309, 434
MmeI TCCRAC 3 cut(s) 1127, 1380, 1515
Mph1103I ATGCAT 1 cut(s) 1581
MroI TCCGGA 1 cut(s) 937
MroXI GAANNNNTTC 2 cut(s) 303, 1244
MseI TTAA 7 cut(s) 33, 468, 506, 1119, 1422, 1497, 1572
MslI CAYNNNNRTG 3 cut(s) 11, 1202, 1665
MspA1I CMGCKG 1 cut(s) 782
MspCI CTTAAG 1 cut(s) 505
MspI CCGG 6 cut(s) 145, 403, 491, 678, 938, 1601
MspR9I CCNGG 2 cut(s) 491, 492
MwoI GCNNNNNNNGC 6 cut(s) 283, 707, 1268, 1284, 1438, 1613
NciI CCSGG 2 cut(s) 491, 492
NcoI CCATGG 2 cut(s) 1279, 1320
NdeI CATATG 1 cut(s) 343
NdeII GATC 5 cut(s) 672, 765, 858, 901, 1163
NlaIV GGNNCC 3 cut(s) 377, 572, 1045
NmuCI GTSAC 2 cut(s) 485, 1490
NsiI ATGCAT 1 cut(s) 1581
NspI RCATGY 3 cut(s) 89, 1579, 1583
PaeI GCATGC 1 cut(s) 1583
PagI TCATGA 1 cut(s) 225
PcsI WCGNNNNNNNCGW 1 cut(s) 665
PdmI GAANNNNTTC 2 cut(s) 303, 1244
PfeI GAWTC 3 cut(s) 229, 1308, 1547
PkrI GCNGC 5 cut(s) 781, 784, 1088, 1261, 1367
PleI GAGTC 2 cut(s) 309, 433
PpsI GAGTC 2 cut(s) 309, 433
Psp124BI GAGCTC 1 cut(s) 356
PspEI GGTNACC 1 cut(s) 485
PspFI CCCAGC 1 cut(s) 873
PspN4I GGNNCC 3 cut(s) 377, 572, 1045
PstI CTGCAG 1 cut(s) 787
PsuI RGATCY 2 cut(s) 901, 1163
RsaI GTAC 3 cut(s) 776, 1208, 1413
RsaNI GTAC 3 cut(s) 775, 1207, 1412
RseI CAYNNNNRTG 3 cut(s) 11, 1202, 1665
SacI GAGCTC 1 cut(s) 356
SaqAI TTAA 7 cut(s) 33, 468, 506, 1119, 1422, 1497, 1572
SatI GCNGC 5 cut(s) 780, 783, 1087, 1260, 1366
Sau3AI GATC 5 cut(s) 672, 765, 858, 901, 1163
SchI GAGTC 2 cut(s) 309, 434
ScrFI CCNGG 2 cut(s) 491, 492
SduI GDGCHC 4 cut(s) 155, 208, 356, 1566
SfaNI GCATC 4 cut(s) 511, 688, 720, 1206
SfcI CTRYAG 3 cut(s) 783, 1167, 1527
SmaI CCCGGG 1 cut(s) 492
SmiMI CAYNNNNRTG 3 cut(s) 11, 1202, 1665
SmlI CTYRAG 1 cut(s) 505
SmoI CTYRAG 1 cut(s) 505
SphI GCATGC 1 cut(s) 1583
SsiI CCGC 7 cut(s) 148, 526, 574, 727, 780, 1086, 1473
SspMI CTAG 1 cut(s) 864
SstI GAGCTC 1 cut(s) 356
StyD4I CCNGG 2 cut(s) 489, 490
StyI CCWWGG 3 cut(s) 24, 1279, 1320
TaaI ACNGT 2 cut(s) 72, 1394
TaiI ACGT 3 cut(s) 468, 953, 1417
TaqI TCGA 5 cut(s) 294, 561, 668, 816, 1068
TatI WGTACW 1 cut(s) 1206
TauI GCSGC 2 cut(s) 782, 1089
TfiI GAWTC 3 cut(s) 229, 1308, 1547
Tru1I TTAA 7 cut(s) 33, 468, 506, 1119, 1422, 1497, 1572
Tru9I TTAA 7 cut(s) 33, 468, 506, 1119, 1422, 1497, 1572
TscAI CASTG 1 cut(s) 1261
TseFI GTSAC 2 cut(s) 485, 1490
TseI GCWGC 3 cut(s) 782, 1259, 1365
Tsp45I GTSAC 2 cut(s) 485, 1490
TspDTI ATGAA 3 cut(s) 312, 1560, 1652
TspGWI ACGGA 2 cut(s) 170, 1194
TspMI CCCGGG 1 cut(s) 490
TspRI CASTG 1 cut(s) 1261
Vha464I CTTAAG 1 cut(s) 505
XapI RAATTY 5 cut(s) 137, 511, 664, 995, 1641
XceI RCATGY 3 cut(s) 89, 1579, 1583
XmaI CCCGGG 1 cut(s) 490
XmnI GAANNNNTTC 2 cut(s) 303, 1244
XspI CTAG 1 cut(s) 864
Zsp2I ATGCAT 1 cut(s) 1581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.