Rroxscaffold_4G00281400

Pentatricopeptide repeat-containing protein At3g29230-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0014806
Physical Location & Seq
Forward (+)
3725330 .. 3727000
1671 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00281400.1

Sequence Viewer

Length: 1671 bp
ATGGCTTATTTCTTAGAGCTCAAACTCTCAAAATTACTGCCACAATGCACATTCAGACAGTTGAAGCAAATACATGCCCTCATTCTCACTACCTCACTCGACCAAGACATCCAAACTTTCTCCAAATTTCTCCGGCGGAGCACGGAGTTTGGAACCATGGAATATCCCAATCTCATATATTCCCAACTGGGTGCTCAGTTCAGTAATAACATCATGATTCAAAATGCTATGATTAGAGGGTATGATGGAAATGGTCTCTTCGAGCAATGCCTGCACCTGTTCGATGAAATGCCTCAAAGAGGACTCAAACCCCATAACTTCACTTACCCATATGTGTTGAGCTCGTGTTCTAAACTGGGTTGGTTCCGAAAAGGCAAACACGTGCATTGCCGGATTGTAAAGGATGGGTTTGAGTCCAATCCATCAGTTGCTAGTGCCCTTTTCCATTTATACGTTAAAATGGTGGATTTTGGTGACCCGGGTGCTGAAAACTCAAGGCATTTGAGTGATGCCCGCAAGGTGTTTGATGATATGTCTGTGAAAACTATCGAATTATGGAACCGCATGATTTCACTCTATGTGAGTGCTTGTGATGTTCAGAGTGCAAGGAAGCTGTTTGATGTCATGCCTGAAAGGGACATTGTTTCGTGGAATTCTATGATCACCGGCTACGCTGAAGTAAGGGATGCAGGCAATGCGAGAGATTTGTTTGAACGGATGCCCGAGAAGGATGTTGTATCATGGACAATAATGATCAGAGTGTATGCCGCTGCAGGAGACCTTATGACAGCGAGAAAGTTTTTCGAGACAATGCCTTGCAAGAATGTGGTTTCTTGGAACTCTATGATCGCTAGTTACACCCAGCATGGACAACATGAAGAAGCATTGGATCTCTTTGTCCAAATGCAATCGAGAGGTGAAGTTCCGGATAAATACACATTTGTTTCTGTTCTATCGGCTTGTTCTCAGTTGGGTGCTTTAGAATTTGGAAAGTGGATACACTACTTGATAGAAGACTGGTCTCAGTTTGGAGCCATTTTGGGGACTGCCCTTATCGATATGTACGCAAAGTGCGGCAATCTAAATAGAGCTTTCACACTTTTTATCAAGATGGGAAAGAGGGATGTATTTTGTTGGAATGTCATGATTAGATCTGTAGCTATCCACGGAAGAACAGAAGACGCCATCAAGATATACTCATTGATGCAAAAAAAAGGGTTGAAGCCGAATGACTTCACGTTCACTGCTGCTCTGTTCGCTTGTAGCCATGGAGGCTTAGTAAAGGAAGGTGAAAGAATCTTCTATTCCATGGAGAGGGATTTTGAGGTTGAACCAAAACTCCAGCACTATGGCTGCATAATTGACCTACTGAGCCGAAACGGTCAGTTGGAGGAAGCAGTACGTCTATTTAAGGTAATGCCGTATAAGCCTGACATAGCAATATGGGGAGCTTTGCTTGGCGGTTGCAGAGATAGAAGTCACCTTAAATTGGCAGAGGAAGTGATAGAGAAAGCTACAGAGTTGGAAGCAAATGAATCAGGAGTTTATGTGCTCTTGTCTAACATGCATGCCTCAGTAGGGCAATGGCCGGAGGCTCAAAGTGCAAGAGAAATGATGGAAGAAAAGAAAATTTGGAAGAACACAGGGCATAGTAATGTTTATGCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

556

Amino Acids

63.54

Weight (kDa)

6.97

Isoelectric Point (pI)

42.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 70 - 118 4.7e-08 PPR repeat family
PPR_2 PF13041 274 - 322 3.9e-14 PPR repeat family
PPR PF01535 277 - 306 3.6e-09 PPR repeat
PPR_2 PF13041 374 - 421 1.4e-11 PPR repeat family
E_motif PF20431 494 - 553 1.9e-08 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014806)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g29410
malus_domestica MD01G1200000.v1.1 MD07G1267900.v1.1
prunus_persica Prupe.2G293600_v2.0.a1
pyrus_communis pycom01g21010 pycom07g24550
rosa_chinensis RchiOBHm_Chr1g0377181 RchiOBHm_Chr1g0377191
rosa_laevigata RLG00000026538
rosa_multiflora Rmu_ssc0000155.1_g000013 Rmu_ssc0000155.1_g000014
rosa_roxburghii Rroxscaffold_4G00281400
rosa_rugosa Rorug01G0401900
rosa_samantha Rh1AG419300 Rh1BG378400 Rh1CG392400
rosa_wichuraiana Rw1G036780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 925
AciI CCGC 6 cut(s) 136, 514, 562, 768, 1074, 1461
AclWI GGATC 1 cut(s) 897
AcoI YGGCCR 1 cut(s) 1586
AcsI RAATTY 4 cut(s) 125, 652, 983, 1629
AcuI CTGAAG 1 cut(s) 696
AcvI CACGTG 1 cut(s) 382
AcyI GRCGYC 1 cut(s) 1182
AfaI GTAC 2 cut(s) 1064, 1401
AfiI CCNNNNNNNGG 5 cut(s) 299, 1041, 1314, 1489, 1578
AflIII ACRYGT 1 cut(s) 379
AgsI TTSAA 5 cut(s) 64, 221, 713, 1222, 1331
AloI GAACNNNNNNTCC 2 cut(s) 1323, 1355
AluBI AGCT 7 cut(s) 19, 342, 613, 1091, 1160, 1451, 1514
AluI AGCT 7 cut(s) 19, 342, 613, 1091, 1160, 1451, 1514
Alw21I GWGCWC 5 cut(s) 21, 143, 196, 344, 1554
Alw26I GTCTC 4 cut(s) 260, 771, 800, 1026
AlwI GGATC 1 cut(s) 897
Ama87I CYCGRG 2 cut(s) 478, 722
Aor13HI TCCGGA 1 cut(s) 925
AoxI GGCC 1 cut(s) 1586
ApeKI GCWGC 3 cut(s) 770, 1247, 1353
ApoI RAATTY 4 cut(s) 125, 652, 983, 1629
Asp700I GAANNNNTTC 1 cut(s) 1232
AsuC2I CCSGG 2 cut(s) 479, 480
AsuHPI GGTGA 5 cut(s) 485, 655, 929, 1301, 1472
AvaI CYCGRG 2 cut(s) 478, 722
BaeGI GKGCMC 1 cut(s) 439
BanII GRGCYC 2 cut(s) 21, 344
BauI CACGAG 1 cut(s) 343
BbrPI CACGTG 1 cut(s) 382
BbsI GAAGAC 2 cut(s) 1020, 1185
Bbv12I GWGCWC 5 cut(s) 21, 143, 196, 344, 1554
BbvI GCAGC 3 cut(s) 757, 1234, 1340
BccI CCATC 6 cut(s) 239, 398, 430, 1105, 1193, 1609
BceAI ACGGC 1 cut(s) 1405
BciVI GTATCC 1 cut(s) 990
BclI TGATCA 2 cut(s) 660, 753
BcnI CCSGG 2 cut(s) 479, 480
BcoDI GTCTC 4 cut(s) 260, 771, 800, 1026
BfaI CTAG 2 cut(s) 432, 852
BfmI CTRYAG 3 cut(s) 771, 1155, 1515
BfuI GTATCC 1 cut(s) 990
BglI GCCNNNNNGGC 1 cut(s) 1272
BglII AGATCT 1 cut(s) 1151
BisI GCNGC 5 cut(s) 768, 771, 1075, 1248, 1354
BlsI GCNGC 5 cut(s) 769, 772, 1076, 1249, 1355
Bme1390I CCNGG 2 cut(s) 479, 480
BmeT110I CYCGRG 2 cut(s) 478, 722
BmiI GGNNCC 4 cut(s) 154, 365, 560, 1033
BmrFI CCNGG 2 cut(s) 479, 480
BmrI ACTGGG 2 cut(s) 197, 365
BmsI GCATC 4 cut(s) 499, 676, 708, 1194
BmuI ACTGGG 2 cut(s) 197, 365
BpiI GAAGAC 2 cut(s) 1020, 1185
BpmI CTGGAG 1 cut(s) 1325
BpuEI CTTGAG 1 cut(s) 478
BpuMI CCSGG 2 cut(s) 479, 480
Bsa29I ATCGAT 1 cut(s) 1056
BsaAI YACGTR 1 cut(s) 382
BsaHI GRCGYC 1 cut(s) 1182
BsaI GGTCTC 3 cut(s) 260, 771, 1026
BsaJI CCNNGG 5 cut(s) 156, 478, 1165, 1267, 1308
BsaWI WCCGGW 1 cut(s) 925
BsaXI ACNNNNNCTCC 6 cut(s) 1263, 1293, 1323, 1353, 1533, 1563
Bsc4I CCNNNNNNNGG 5 cut(s) 299, 1041, 1314, 1489, 1578
Bse118I RCCGGY 1 cut(s) 665
Bse1I ACTGG 3 cut(s) 192, 360, 1022
Bse3DI GCAATG 4 cut(s) 272, 385, 700, 1589
BseAI TCCGGA 1 cut(s) 925
BseCI ATCGAT 1 cut(s) 1056
BseDI CCNNGG 5 cut(s) 156, 478, 1165, 1267, 1308
BseGI GGATG 6 cut(s) 108, 409, 691, 723, 736, 1129
BseLI CCNNNNNNNGG 5 cut(s) 299, 1041, 1314, 1489, 1578
BseMI GCAATG 4 cut(s) 272, 385, 700, 1589
BseMII CTCAG 5 cut(s) 209, 980, 1037, 1361, 1587
BseNI ACTGG 3 cut(s) 192, 360, 1022
BseSI GKGCMC 1 cut(s) 439
BseXI GCAGC 3 cut(s) 757, 1234, 1340
BseYI CCCAGC 1 cut(s) 861
BsgI GTGCAG 1 cut(s) 257
BshFI GGCC 1 cut(s) 1588
BshVI ATCGAT 1 cut(s) 1056
BsiHKAI GWGCWC 5 cut(s) 21, 143, 196, 344, 1554
BsiHKCI CYCGRG 2 cut(s) 478, 722
BsiSI CCGG 6 cut(s) 133, 391, 479, 666, 926, 1589
BslFI GGGAC 2 cut(s) 650, 1057
BslI CCNNNNNNNGG 5 cut(s) 299, 1041, 1314, 1489, 1578
BsmAI GTCTC 4 cut(s) 260, 771, 800, 1026
BsmFI GGGAC 2 cut(s) 650, 1057
BsnI GGCC 1 cut(s) 1588
Bso31I GGTCTC 3 cut(s) 260, 771, 1026
BsoBI CYCGRG 2 cut(s) 478, 722
Bsp1286I GDGCHC 6 cut(s) 21, 143, 196, 344, 439, 1554
Bsp13I TCCGGA 1 cut(s) 925
Bsp143I GATC 5 cut(s) 660, 753, 846, 889, 1151
Bsp19I CCATGG 3 cut(s) 156, 1267, 1308
BspACI CCGC 6 cut(s) 136, 514, 562, 768, 1074, 1461
BspANI GGCC 1 cut(s) 1588
BspCNI CTCAG 5 cut(s) 208, 979, 1036, 1362, 1586
BspDI ATCGAT 1 cut(s) 1056
BspEI TCCGGA 1 cut(s) 925
BspHI TCATGA 2 cut(s) 213, 1143
BspLI GGNNCC 4 cut(s) 154, 365, 560, 1033
BspMAI CTGCAG 1 cut(s) 775
BspPI GGATC 1 cut(s) 897
BspTNI GGTCTC 3 cut(s) 260, 771, 1026
BsrDI GCAATG 4 cut(s) 272, 385, 700, 1589
BsrFI RCCGGY 1 cut(s) 665
BsrI ACTGG 3 cut(s) 192, 360, 1022
BssAI RCCGGY 1 cut(s) 665
BssECI CCNNGG 5 cut(s) 156, 478, 1165, 1267, 1308
BssMI GATC 5 cut(s) 660, 753, 846, 889, 1151
BssNI GRCGYC 1 cut(s) 1182
BssSI CACGAG 1 cut(s) 343
BssT1I CCWWGG 3 cut(s) 156, 1267, 1308
Bst2BI CACGAG 1 cut(s) 343
Bst4CI ACNGT 2 cut(s) 60, 1382
Bst6I CTCTTC 1 cut(s) 263
BstACI GRCGYC 1 cut(s) 1182
BstAPI GCANNNNNTGC 2 cut(s) 271, 695
BstBAI YACGTR 1 cut(s) 382
BstC8I GCNNGC 4 cut(s) 272, 514, 691, 1569
BstDEI CTNAG 7 cut(s) 13, 195, 966, 1023, 1276, 1370, 1573
BstDSI CCRYGG 4 cut(s) 156, 1165, 1267, 1308
BstEII GGTNACC 1 cut(s) 473
BstENI CCTNNNNNAGG 1 cut(s) 297
BstF5I GGATG 6 cut(s) 108, 409, 691, 723, 736, 1129
BstKTI GATC 5 cut(s) 663, 756, 849, 892, 1154
BstMAI GTCTC 4 cut(s) 260, 771, 800, 1026
BstMBI GATC 5 cut(s) 660, 753, 846, 889, 1151
BstMWI GCNNNNNNNGC 6 cut(s) 271, 695, 1256, 1272, 1426, 1601
BstNSI RCATGY 3 cut(s) 77, 1567, 1571
BstPI GGTNACC 1 cut(s) 473
BstSCI CCNGG 2 cut(s) 477, 478
BstSFI CTRYAG 3 cut(s) 771, 1155, 1515
BstSLI GKGCMC 1 cut(s) 439
BstV1I GCAGC 3 cut(s) 757, 1234, 1340
BstV2I GAAGAC 2 cut(s) 1020, 1185
BstX2I RGATCY 2 cut(s) 889, 1151
BstXI CCANNNNNNTGG 1 cut(s) 1349
BstYI RGATCY 2 cut(s) 889, 1151
Bsu15I ATCGAT 1 cut(s) 1056
BsuI GTATCC 1 cut(s) 990
BsuRI GGCC 1 cut(s) 1588
BsuTUI ATCGAT 1 cut(s) 1056
BtgI CCRYGG 4 cut(s) 156, 1165, 1267, 1308
BtsCI GGATG 6 cut(s) 108, 409, 691, 723, 736, 1129
BtsI GCAGTG 1 cut(s) 1242
BtsIMutI CAGTG 1 cut(s) 1242
Cac8I GCNNGC 4 cut(s) 272, 514, 691, 1569
CciI TCATGA 2 cut(s) 213, 1143
Cfr10I RCCGGY 1 cut(s) 665
Cfr9I CCCGGG 1 cut(s) 478
ClaI ATCGAT 1 cut(s) 1056
CseI GACGC 1 cut(s) 1190
Csp6I GTAC 2 cut(s) 1063, 1400
CviQI GTAC 2 cut(s) 1063, 1400
DdeI CTNAG 7 cut(s) 13, 195, 966, 1023, 1276, 1370, 1573
DpnI GATC 5 cut(s) 662, 755, 848, 891, 1153
DpnII GATC 5 cut(s) 660, 753, 846, 889, 1151
EaeI YGGCCR 1 cut(s) 1586
Eam1104I CTCTTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 263
EciI GGCGGA 1 cut(s) 151
Ecl136II GAGCTC 2 cut(s) 19, 342
Eco130I CCWWGG 3 cut(s) 156, 1267, 1308
Eco24I GRGCYC 2 cut(s) 21, 344
Eco31I GGTCTC 3 cut(s) 260, 771, 1026
Eco53kI GAGCTC 2 cut(s) 19, 342
Eco57I CTGAAG 1 cut(s) 696
Eco72I CACGTG 1 cut(s) 382
Eco88I CYCGRG 2 cut(s) 478, 722
Eco91I GGTNACC 1 cut(s) 473
EcoICRI GAGCTC 2 cut(s) 19, 342
EcoNI CCTNNNNNAGG 1 cut(s) 297
EcoO65I GGTNACC 1 cut(s) 473
EcoRI GAATTC 1 cut(s) 652
EcoT14I CCWWGG 3 cut(s) 156, 1267, 1308
EcoT22I ATGCAT 1 cut(s) 1569
EcoT38I GRGCYC 2 cut(s) 21, 344
ErhI CCWWGG 3 cut(s) 156, 1267, 1308
FaqI GGGAC 2 cut(s) 650, 1057
FauI CCCGC 1 cut(s) 521
FauNDI CATATG 1 cut(s) 331
FbaI TGATCA 2 cut(s) 660, 753
Fnu4HI GCNGC 5 cut(s) 768, 771, 1075, 1248, 1354
FokI GGATG 6 cut(s) 95, 416, 698, 730, 743, 1136
FriOI GRGCYC 2 cut(s) 21, 344
Fsp4HI GCNGC 5 cut(s) 768, 771, 1075, 1248, 1354
FspBI CTAG 2 cut(s) 432, 852
GluI GCNGC 5 cut(s) 768, 771, 1075, 1248, 1354
GsaI CCCAGC 1 cut(s) 865
GsuI CTGGAG 1 cut(s) 1325
HaeIII GGCC 1 cut(s) 1588
HapII CCGG 6 cut(s) 133, 391, 479, 666, 926, 1589
HgaI GACGC 1 cut(s) 1190
Hin1I GRCGYC 1 cut(s) 1182
HinfI GANTC 5 cut(s) 217, 303, 413, 1296, 1535
HpaII CCGG 6 cut(s) 133, 391, 479, 666, 926, 1589
HphI GGTGA 5 cut(s) 485, 655, 929, 1301, 1472
Hpy166II GTNNAC 1 cut(s) 1242
Hpy188I TCNGA 4 cut(s) 56, 368, 600, 758
Hpy188III TCNNGA 9 cut(s) 214, 805, 912, 926, 1108, 1144, 1189, 1539, 1668
Hpy8I GTNNAC 1 cut(s) 1242
HpyAV CCTTC 2 cut(s) 721, 1280
HpyCH4III ACNGT 2 cut(s) 60, 1382
HpyCH4IV ACGT 4 cut(s) 381, 453, 1238, 1402
HpyF10VI GCNNNNNNNGC 6 cut(s) 271, 695, 1256, 1272, 1426, 1601
HpyF3I CTNAG 7 cut(s) 13, 195, 966, 1023, 1276, 1370, 1573
HpySE526I ACGT 4 cut(s) 381, 453, 1238, 1402
Hsp92I GRCGYC 1 cut(s) 1182
Kpn2I TCCGGA 1 cut(s) 925
Ksp22I TGATCA 2 cut(s) 660, 753
Kzo9I GATC 5 cut(s) 660, 753, 846, 889, 1151
LmnI GCTCC 3 cut(s) 138, 1031, 1448
Lsp1109I GCAGC 3 cut(s) 757, 1234, 1340
LweI GCATC 4 cut(s) 499, 676, 708, 1194
MaeI CTAG 2 cut(s) 432, 852
MaeII ACGT 4 cut(s) 381, 453, 1238, 1402
MaeIII GTNAC 3 cut(s) 473, 854, 1478
MalI GATC 5 cut(s) 662, 755, 848, 891, 1153
MboI GATC 5 cut(s) 660, 753, 846, 889, 1151
MboII GAAGA 8 cut(s) 250, 890, 1025, 1182, 1190, 1291, 1631, 1648
MflI RGATCY 2 cut(s) 889, 1151
MhlI GDGCHC 6 cut(s) 21, 143, 196, 344, 439, 1554
MluCI AATT 8 cut(s) 32, 125, 551, 652, 983, 1359, 1487, 1629
MlyI GAGTC 2 cut(s) 297, 422
MmeI TCCRAC 3 cut(s) 1115, 1368, 1503
Mph1103I ATGCAT 1 cut(s) 1569
MroI TCCGGA 1 cut(s) 925
MroXI GAANNNNTTC 1 cut(s) 1232
MseI TTAA 3 cut(s) 456, 1410, 1485
MslI CAYNNNNRTG 2 cut(s) 504, 1653
MspA1I CMGCKG 1 cut(s) 770
MspI CCGG 6 cut(s) 133, 391, 479, 666, 926, 1589
MspR9I CCNGG 2 cut(s) 479, 480
MwoI GCNNNNNNNGC 6 cut(s) 271, 695, 1256, 1272, 1426, 1601
NciI CCSGG 2 cut(s) 479, 480
NcoI CCATGG 3 cut(s) 156, 1267, 1308
NdeI CATATG 1 cut(s) 331
NdeII GATC 5 cut(s) 660, 753, 846, 889, 1151
NlaIV GGNNCC 4 cut(s) 154, 365, 560, 1033
NmuCI GTSAC 2 cut(s) 473, 1478
NsiI ATGCAT 1 cut(s) 1569
NspI RCATGY 3 cut(s) 77, 1567, 1571
PaeI GCATGC 1 cut(s) 1571
PagI TCATGA 2 cut(s) 213, 1143
PdmI GAANNNNTTC 1 cut(s) 1232
PfeI GAWTC 3 cut(s) 217, 1296, 1535
PkrI GCNGC 5 cut(s) 769, 772, 1076, 1249, 1355
PleI GAGTC 2 cut(s) 297, 421
PmaCI CACGTG 1 cut(s) 382
PmlI CACGTG 1 cut(s) 382
PpsI GAGTC 2 cut(s) 297, 421
Ppu21I YACGTR 1 cut(s) 382
Psp124BI GAGCTC 2 cut(s) 21, 344
PspCI CACGTG 1 cut(s) 382
PspEI GGTNACC 1 cut(s) 473
PspFI CCCAGC 1 cut(s) 861
PspN4I GGNNCC 4 cut(s) 154, 365, 560, 1033
PstI CTGCAG 1 cut(s) 775
PsuI RGATCY 2 cut(s) 889, 1151
RsaI GTAC 2 cut(s) 1064, 1401
RsaNI GTAC 2 cut(s) 1063, 1400
RseI CAYNNNNRTG 2 cut(s) 504, 1653
SacI GAGCTC 2 cut(s) 21, 344
SaqAI TTAA 3 cut(s) 456, 1410, 1485
SatI GCNGC 5 cut(s) 768, 771, 1075, 1248, 1354
Sau3AI GATC 5 cut(s) 660, 753, 846, 889, 1151
SchI GAGTC 2 cut(s) 297, 422
ScrFI CCNGG 2 cut(s) 479, 480
SduI GDGCHC 6 cut(s) 21, 143, 196, 344, 439, 1554
SfaNI GCATC 4 cut(s) 499, 676, 708, 1194
SfcI CTRYAG 3 cut(s) 771, 1155, 1515
SmaI CCCGGG 1 cut(s) 480
SmiMI CAYNNNNRTG 2 cut(s) 504, 1653
SmlI CTYRAG 1 cut(s) 493
SmoI CTYRAG 1 cut(s) 493
SphI GCATGC 1 cut(s) 1571
Sse9I AATT 8 cut(s) 32, 125, 551, 652, 983, 1359, 1487, 1629
SsiI CCGC 6 cut(s) 136, 514, 562, 768, 1074, 1461
SspMI CTAG 2 cut(s) 432, 852
SstI GAGCTC 2 cut(s) 21, 344
StyD4I CCNGG 2 cut(s) 477, 478
StyI CCWWGG 3 cut(s) 156, 1267, 1308
TaaI ACNGT 2 cut(s) 60, 1382
TaiI ACGT 4 cut(s) 384, 456, 1241, 1405
TaqI TCGA 7 cut(s) 99, 261, 282, 549, 804, 911, 1056
TasI AATT 8 cut(s) 32, 125, 551, 652, 983, 1359, 1487, 1629
TauI GCSGC 2 cut(s) 770, 1077
TfiI GAWTC 3 cut(s) 217, 1296, 1535
Tru1I TTAA 3 cut(s) 456, 1410, 1485
Tru9I TTAA 3 cut(s) 456, 1410, 1485
TscAI CASTG 1 cut(s) 1249
TseFI GTSAC 2 cut(s) 473, 1478
TseI GCWGC 3 cut(s) 770, 1247, 1353
Tsp45I GTSAC 2 cut(s) 473, 1478
TspDTI ATGAA 3 cut(s) 300, 891, 1548
TspGWI ACGGA 3 cut(s) 158, 730, 1182
TspMI CCCGGG 1 cut(s) 478
TspRI CASTG 1 cut(s) 1249
XagI CCTNNNNNAGG 1 cut(s) 297
XapI RAATTY 4 cut(s) 125, 652, 983, 1629
XceI RCATGY 3 cut(s) 77, 1567, 1571
XmaI CCCGGG 1 cut(s) 478
XmnI GAANNNNTTC 1 cut(s) 1232
XspI CTAG 2 cut(s) 432, 852
Zsp2I ATGCAT 1 cut(s) 1569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.