Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0010049

Physical Location & Seq

Genomic Coordinates Forward (+)

13458738 .. 13474890

Gene Structure 16153 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1068700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGGGTCGCAAACTCAAAGAATCCTCCGCCGCCATCGGCGAGGCAGAACTGCAACAGGCCCAACCTCTCCACGAAGCCAAAGCCGAGAGGAAGAAGAAGAAGAAGAAGCAGAAAAACAAAGACGAAGAAGAAGCCCATCCCAGCCCCAACCCCAAGAGAAAGCTCGAAGACATTGCTCCTCAGGAAGAAGACTCAGATTCTATTGTCAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGCACAAGAAATCCAAAGACAAGGAGGAAGAACCCGAAAATAATCAGGAGCCACAGGAAAATGGCCATGCCGACGAAGGTGAATCTGGAGACGCGGCTGTGGTGGTTAGTGGGAAGGATTCGAAGGAAGCCAAATACAAGCCACTGACTTCCTTTGCAGAATCGAAGCTTCCTAGTGAGGTTTTACAATGCTGTCAGAATTTCAACAGTCCATCTCCGATTCAATCCCGGGCCTGGCCGTTCTTATTGGACGGTCGCGATTTTATTGGGATTGCAAAAACCGGGTCAGGCAAGACTTTGGCTTTTGGAATACCCGCTATTATGCAGGTTTTGAACAAGAGGAAGGGTAAGTTTTCGAGGGGACGAACTCCTCTTTGCCTTGCGCTTGCACCTACAAGGGAGCTAGCTCAACAAATTTCAGATGTTTTGTTCGAGGCTGGGAAACCTTGTGGTGTGGTATCAGTTTGTTTGTTCGGAGGAGCATCCAAGGGACCCCAAATATCTATGTTGAAGTCTGGTGTTGTGGAAGACATCGTCATTGGAACTCCTGGTCGTCTAAAGGATCTCATTGAAAATAAGGATTGTTGCCTGAAGGAAGTATCTTTTACGGTCCTTGATGAAGCAGATCGAATGCTAGACTTGGGATTTGAACCAGAAGTTCGCTATATATTGGGCCAGACATGCTCTGCTCGGCAAATGGTAATGTTCAGTGCTACATGGCCTCCATCAGTTCATCAATTAGCTCAGGAATTCATGGATCCTAATCCTGTTAAGGTAGTTGTTGGATCAGAGGATTTAGCTGCCAACCATGATGTTATGCAGATAGTTGAGGTCTTGGATGATCATTCACGTAATGGGCGCTTGGTTGCATTGCTAGAAAAATACCACAAATCCCAAGAGAACAGAGTTTTGATTTTTGTCTTGTACAAAGCGGAAGCCCCTCGCCTTGAGAATATGCTGCACAAAGGGGGTTGGAAAGCTGTTTCTATACATGGTGATAAGGCACAAAGTGAGCGTACAAAGGCACTCTCTCTGTTCAAGAAGGGAAGCTGCCCCTTGATGATAGCTACTGATGTGGCTGCTCGTGGATTGGATATTCCAGACGTTGAAGTAGTGATCAACTATAGTTTTCCCCTCACTACTGAGGATTATGTCCACCGAATTGGGCGGACTGGACGGGCTGGAAAGAAGGGCGTTGCTCATACTTTTTTCACACATCACAACAAGGGACTTGCGGGGGAGCTGGTCAATGTTCTCAGAGAAGCCAAGCAAAATGTGCCAGAAGCCTTGTTGAAATTTGGCACCCATGTTAAGAAGAAGGAGTCCAAACTTTACGGGGCTCACTTCAAAGAGATTCCTGCCGATGCTCCAAAGTCTCAAAAAATCACCTTCAACTCTGACGATGAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

549

Amino Acids

60.64

Weight (kDa)

8.94

Isoelectric Point (pI)

37.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	150 - 324	1.6e-43	DEAD/DEAH box helicase
Helicase_C	PF00271	368 - 473	1.2e-30	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31970
fragaria_vesca	FvH4_5g23490
malus_domestica	MD00G1068700.v1.1 MD06G1023800.v1.1
prunus_persica	Prupe.5G024900_v2.0.a1
pyrus_communis	pycom16g25290
rosa_chinensis	RchiOBHm_Chr7g0212761
rosa_laevigata	RLG00000002870
rosa_multiflora	Rmu_sc0000394.1_g000033 Rmu_sc0008336.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246570 Rroxscaffold_3G00250790 Rroxscaffold_4G00321740 Rroxscaffold_4G00321750
rosa_rugosa	Rorug07G0136500
rosa_samantha	Rh7BG263500 Rh7CG287100
rosa_wichuraiana	Rw7G023130 Rw7G023160 Rw7G023230 Rw7G023270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	550
AccB1I	GGYRCC	1 cut(s)	1535
AccII	CGCG	2 cut(s)	329, 492
AciI	CCGC	7 cut(s)	27, 30, 329, 549, 1166, 1402, 1469
AclWI	GGATC	4 cut(s)	804, 986, 999, 1027
AcoI	YGGCCR	2 cut(s)	298, 470
AcsI	RAATTY	4 cut(s)	433, 648, 983, 1529
AcuI	CTGAAG	1 cut(s)	845
AdeI	CACNNNGTG	1 cut(s)	1244
AfaI	GTAC	2 cut(s)	1160, 1252
AfiI	CCNNNNNNNGG	1 cut(s)	468
AjnI	CCWGG	2 cut(s)	467, 781
Alw26I	GTCTC	2 cut(s)	318, 1614
AlwI	GGATC	4 cut(s)	804, 986, 999, 1027
Ama87I	CYCGRG	1 cut(s)	462
AoxI	GGCC	6 cut(s)	57, 298, 465, 470, 907, 953
ApeKI	GCWGC	4 cut(s)	1034, 1192, 1284, 1313
ApoI	RAATTY	4 cut(s)	433, 648, 983, 1529
ArsI	GACNNNNNNTTYG	4 cut(s)	503, 535, 863, 895
AspLEI	GCGC	2 cut(s)	619, 1095
AspS9I	GGNCC	5 cut(s)	58, 465, 725, 844, 907
AsuC2I	CCSGG	3 cut(s)	463, 464, 517
AsuHPI	GGTGA	3 cut(s)	326, 1241, 1612
AsuII	TTCGAA	1 cut(s)	356
AsuNHI	GCTAGC	1 cut(s)	637
AvaI	CYCGRG	1 cut(s)	462
AvaII	GGWCC	2 cut(s)	725, 844
AxyI	CCTNAGG	1 cut(s)	180
BalI	TGGCCA	1 cut(s)	300
BamHI	GGATCC	1 cut(s)	991
BanI	GGYRCC	1 cut(s)	1535
BanII	GRGCYC	1 cut(s)	1576
BauI	CACGAG	1 cut(s)	1317
BbsI	GAAGAC	3 cut(s)	174, 195, 768
BbvI	GCAGC	4 cut(s)	1021, 1179, 1271, 1300
BccI	CCATC	4 cut(s)	41, 144, 454, 967
BceAI	ACGGC	1 cut(s)	457
BcgI	CGANNNNNNTGC	2 cut(s)	155, 189
BciT130I	CCWGG	2 cut(s)	469, 783
BclI	TGATCA	2 cut(s)	1075, 1350
BcnI	CCSGG	3 cut(s)	463, 464, 517
BcoDI	GTCTC	2 cut(s)	318, 1614
BfaI	CTAG	4 cut(s)	408, 638, 869, 1109
BfmI	CTRYAG	1 cut(s)	1357
BfoI	RGCGCY	1 cut(s)	1096
BfuAI	ACCTGC	1 cut(s)	550
BisI	GCNGC	6 cut(s)	30, 330, 1035, 1193, 1285, 1314
BlsI	GCNGC	6 cut(s)	31, 331, 1036, 1194, 1286, 1315
Bme1390I	CCNGG	5 cut(s)	463, 464, 469, 517, 783
Bme18I	GGWCC	2 cut(s)	725, 844
BmeT110I	CYCGRG	1 cut(s)	462
BmgT120I	GGNCC	5 cut(s)	58, 465, 725, 844, 907
BmiI	GGNNCC	5 cut(s)	285, 726, 727, 993, 1537
BmrFI	CCNGG	5 cut(s)	463, 464, 469, 517, 783
BmsI	GCATC	2 cut(s)	725, 1588
BmtI	GCTAGC	1 cut(s)	641
BpiI	GAAGAC	3 cut(s)	174, 195, 768
BpmI	CTGGAG	1 cut(s)	342
Bpu10I	CCTNAGC	1 cut(s)	978
Bpu14I	TTCGAA	1 cut(s)	356
BpuEI	CTTGAG	1 cut(s)	1202
BpuMI	CCSGG	3 cut(s)	463, 464, 517
BsaAI	YACGTR	1 cut(s)	1085
BsaBI	GATNNNNATC	1 cut(s)	996
BsaJI	CCNNGG	2 cut(s)	462, 720
BsaXI	ACNNNNNCTCC	2 cut(s)	940, 970
Bsc4I	CCNNNNNNNGG	1 cut(s)	468
Bse1I	ACTGG	1 cut(s)	1411
Bse21I	CCTNAGG	1 cut(s)	180
Bse3DI	GCAATG	2 cut(s)	171, 1103
Bse8I	GATNNNNATC	1 cut(s)	996
BseBI	CCWGG	2 cut(s)	469, 783
BseDI	CCNNGG	2 cut(s)	462, 720
BseGI	GGATG	3 cut(s)	136, 716, 1078
BseJI	GATNNNNATC	1 cut(s)	996
BseLI	CCNNNNNNNGG	1 cut(s)	468
BseMI	GCAATG	2 cut(s)	171, 1103
BseMII	CTCAG	5 cut(s)	194, 207, 992, 1368, 1504
BseNI	ACTGG	1 cut(s)	1411
BseRI	GAGGAG	3 cut(s)	168, 594, 726
BseXI	GCAGC	4 cut(s)	1021, 1179, 1271, 1300
BseYI	CCCAGC	2 cut(s)	140, 671
BsgI	GTGCAG	1 cut(s)	1178
Bsh1236I	CGCG	2 cut(s)	329, 492
Bsh1285I	CGRYCG	1 cut(s)	490
BshFI	GGCC	6 cut(s)	59, 300, 467, 472, 909, 955
BshNI	GGYRCC	1 cut(s)	1535
BsiEI	CGRYCG	1 cut(s)	490
BsiHKCI	CYCGRG	1 cut(s)	462
BsiSI	CCGG	2 cut(s)	463, 516
BslFI	GGGAC	3 cut(s)	609, 738, 1476
BslI	CCNNNNNNNGG	1 cut(s)	468
BsmAI	GTCTC	2 cut(s)	318, 1614
BsmBI	CGTCTC	1 cut(s)	318
BsmFI	GGGAC	3 cut(s)	609, 738, 1476
BsmI	GAATGC	1 cut(s)	870
BsnI	GGCC	6 cut(s)	59, 300, 467, 472, 909, 955
BsoBI	CYCGRG	1 cut(s)	462
Bsp119I	TTCGAA	1 cut(s)	356
Bsp1286I	GDGCHC	1 cut(s)	1576
Bsp1407I	TGTACA	1 cut(s)	1158
Bsp143I	GATC	6 cut(s)	796, 859, 991, 1019, 1075, 1350
Bsp68I	TCGCGA	1 cut(s)	492
BspACI	CCGC	7 cut(s)	27, 30, 329, 549, 1166, 1402, 1469
BspANI	GGCC	6 cut(s)	59, 300, 467, 472, 909, 955
BspCNI	CTCAG	5 cut(s)	193, 206, 991, 1369, 1503
BspFNI	CGCG	2 cut(s)	329, 492
BspLI	GGNNCC	5 cut(s)	285, 726, 727, 993, 1537
BspMI	ACCTGC	1 cut(s)	550
BspOI	GCTAGC	1 cut(s)	641
BspPI	GGATC	4 cut(s)	804, 986, 999, 1027
BspT104I	TTCGAA	1 cut(s)	356
BspT107I	GGYRCC	1 cut(s)	1535
BsrDI	GCAATG	2 cut(s)	171, 1103
BsrGI	TGTACA	1 cut(s)	1158
BsrI	ACTGG	1 cut(s)	1411
BssECI	CCNNGG	2 cut(s)	462, 720
BssMI	GATC	6 cut(s)	796, 859, 991, 1019, 1075, 1350
BssSI	CACGAG	1 cut(s)	1317
BssT1I	CCWWGG	1 cut(s)	720
Bst2BI	CACGAG	1 cut(s)	1317
Bst2UI	CCWGG	2 cut(s)	469, 783
Bst4CI	ACNGT	3 cut(s)	443, 488, 844
BstAPI	GCANNNNNTGC	1 cut(s)	1510
BstAUI	TGTACA	1 cut(s)	1158
BstBAI	YACGTR	1 cut(s)	1085
BstBI	TTCGAA	1 cut(s)	356
BstC8I	GCNNGC	2 cut(s)	621, 639
BstDEI	CTNAG	5 cut(s)	180, 193, 978, 1377, 1490
BstF5I	GGATG	3 cut(s)	136, 716, 1078
BstFNI	CGCG	2 cut(s)	329, 492
BstH2I	RGCGCY	1 cut(s)	1096
BstHHI	GCGC	2 cut(s)	619, 1095
BstKTI	GATC	6 cut(s)	799, 862, 994, 1022, 1078, 1353
BstMAI	GTCTC	2 cut(s)	318, 1614
BstMBI	GATC	6 cut(s)	796, 859, 991, 1019, 1075, 1350
BstMCI	CGRYCG	1 cut(s)	490
BstMWI	GCNNNNNNNGC	2 cut(s)	915, 1510
BstNI	CCWGG	2 cut(s)	469, 783
BstNSI	RCATGY	1 cut(s)	918
BstSCI	CCNGG	5 cut(s)	461, 462, 467, 515, 781
BstSFI	CTRYAG	1 cut(s)	1357
BstUI	CGCG	2 cut(s)	329, 492
BstV1I	GCAGC	4 cut(s)	1021, 1179, 1271, 1300
BstV2I	GAAGAC	3 cut(s)	174, 195, 768
BstX2I	RGATCY	2 cut(s)	796, 991
BstXI	CCANNNNNNTGG	1 cut(s)	1397
BstYI	RGATCY	2 cut(s)	796, 991
Bsu36I	CCTNAGG	1 cut(s)	180
BsuRI	GGCC	6 cut(s)	59, 300, 467, 472, 909, 955
BtsCI	GGATG	3 cut(s)	136, 716, 1078
BtsIMutI	CAGTG	2 cut(s)	377, 949
BtuMI	TCGCGA	1 cut(s)	492
BveI	ACCTGC	1 cut(s)	550
Cac8I	GCNNGC	2 cut(s)	621, 639
CfoI	GCGC	2 cut(s)	619, 1095
Cfr13I	GGNCC	5 cut(s)	58, 465, 725, 844, 907
Cfr9I	CCCGGG	1 cut(s)	462
CseI	GACGC	1 cut(s)	335
Csp6I	GTAC	2 cut(s)	1159, 1251
CviAII	CATG	7 cut(s)	302, 915, 951, 988, 1043, 1226, 1541
CviQI	GTAC	2 cut(s)	1159, 1251
DdeI	CTNAG	5 cut(s)	180, 193, 978, 1377, 1490
DpnI	GATC	6 cut(s)	798, 861, 993, 1021, 1077, 1352
DpnII	GATC	6 cut(s)	796, 859, 991, 1019, 1075, 1350
DraIII	CACNNNGTG	1 cut(s)	1244
EaeI	YGGCCR	2 cut(s)	298, 470
EciI	GGCGGA	2 cut(s)	16, 1417
Eco130I	CCWWGG	1 cut(s)	720
Eco24I	GRGCYC	1 cut(s)	1576
Eco47I	GGWCC	2 cut(s)	725, 844
Eco57I	CTGAAG	1 cut(s)	845
Eco81I	CCTNAGG	1 cut(s)	180
Eco88I	CYCGRG	1 cut(s)	462
EcoO109I	RGGNCCY	1 cut(s)	725
EcoRI	GAATTC	1 cut(s)	983
EcoRII	CCWGG	2 cut(s)	467, 781
EcoT14I	CCWWGG	1 cut(s)	720
EcoT38I	GRGCYC	1 cut(s)	1576
ErhI	CCWWGG	1 cut(s)	720
Esp3I	CGTCTC	1 cut(s)	318
FaeI	CATG	7 cut(s)	305, 918, 954, 991, 1046, 1229, 1544
FaqI	GGGAC	3 cut(s)	609, 738, 1476
FatI	CATG	7 cut(s)	301, 914, 950, 987, 1042, 1225, 1540
FauI	CCCGC	2 cut(s)	556, 1462
FbaI	TGATCA	2 cut(s)	1075, 1350
Fnu4HI	GCNGC	6 cut(s)	30, 330, 1035, 1193, 1285, 1314
FokI	GGATG	3 cut(s)	123, 703, 1085
FriOI	GRGCYC	1 cut(s)	1576
Fsp4HI	GCNGC	6 cut(s)	30, 330, 1035, 1193, 1285, 1314
FspBI	CTAG	4 cut(s)	408, 638, 869, 1109
GlaI	GCGC	2 cut(s)	618, 1094
GluI	GCNGC	6 cut(s)	30, 330, 1035, 1193, 1285, 1314
GsaI	CCCAGC	2 cut(s)	144, 675
GsuI	CTGGAG	1 cut(s)	342
HaeII	RGCGCY	1 cut(s)	1096
HaeIII	GGCC	6 cut(s)	59, 300, 467, 472, 909, 955
HapII	CCGG	2 cut(s)	463, 516
HgaI	GACGC	1 cut(s)	335
HhaI	GCGC	2 cut(s)	619, 1095
Hin1II	CATG	7 cut(s)	305, 918, 954, 991, 1046, 1229, 1544
Hin6I	GCGC	2 cut(s)	617, 1093
HinP1I	GCGC	2 cut(s)	617, 1093
HindIII	AAGCTT	1 cut(s)	401
HinfI	GANTC	9 cut(s)	20, 191, 197, 317, 353, 395, 454, 1556, 1588
HpaII	CCGG	2 cut(s)	463, 516
HphI	GGTGA	3 cut(s)	326, 1241, 1612
Hpy166II	GTNNAC	1 cut(s)	1390
Hpy188I	TCNGA	8 cut(s)	196, 432, 453, 655, 710, 1024, 1493, 1633
Hpy188III	TCNNGA	7 cut(s)	182, 281, 321, 491, 980, 1273, 1334
Hpy8I	GTNNAC	1 cut(s)	1390
Hpy99I	CGWCG	1 cut(s)	311
HpyAV	CCTTC	9 cut(s)	305, 343, 352, 571, 820, 1270, 1417, 1546, 1633
HpyCH4III	ACNGT	3 cut(s)	443, 488, 844
HpyCH4IV	ACGT	2 cut(s)	1084, 1338
HpyCH4V	TGCA	8 cut(s)	52, 392, 509, 559, 623, 1054, 1103, 1195
HpyF10VI	GCNNNNNNNGC	2 cut(s)	915, 1510
HpyF3I	CTNAG	5 cut(s)	180, 193, 978, 1377, 1490
HpySE526I	ACGT	2 cut(s)	1084, 1338
Hsp92II	CATG	7 cut(s)	305, 918, 954, 991, 1046, 1229, 1544
HspAI	GCGC	2 cut(s)	617, 1093
KflI	GGGWCCC	1 cut(s)	725
Ksp22I	TGATCA	2 cut(s)	1075, 1350
Kzo9I	GATC	6 cut(s)	796, 859, 991, 1019, 1075, 1350
LmnI	GCTCC	6 cut(s)	181, 283, 634, 713, 1474, 1606
Lsp1109I	GCAGC	4 cut(s)	1021, 1179, 1271, 1300
LweI	GCATC	2 cut(s)	725, 1588
MaeI	CTAG	4 cut(s)	408, 638, 869, 1109
MaeII	ACGT	2 cut(s)	1084, 1338
MalI	GATC	6 cut(s)	798, 861, 993, 1021, 1077, 1352
MboI	GATC	6 cut(s)	796, 859, 991, 1019, 1075, 1350
MflI	RGATCY	2 cut(s)	796, 991
MhlI	GDGCHC	1 cut(s)	1576
MlsI	TGGCCA	1 cut(s)	300
MluCI	AATT	6 cut(s)	433, 648, 971, 983, 1395, 1529
MluNI	TGGCCA	1 cut(s)	300
MlyI	GAGTC	2 cut(s)	185, 1565
MmeI	TCCRAC	2 cut(s)	997, 1187
Mox20I	TGGCCA	1 cut(s)	300
MscI	TGGCCA	1 cut(s)	300
MseI	TTAA	2 cut(s)	1005, 1545
Msp20I	TGGCCA	1 cut(s)	300
MspI	CCGG	2 cut(s)	463, 516
MspR9I	CCNGG	5 cut(s)	463, 464, 469, 517, 783
Mva1269I	GAATGC	1 cut(s)	870
MvaI	CCWGG	2 cut(s)	469, 783
MvnI	CGCG	2 cut(s)	329, 492
MwoI	GCNNNNNNNGC	2 cut(s)	915, 1510
NciI	CCSGG	3 cut(s)	463, 464, 517
NdeII	GATC	6 cut(s)	796, 859, 991, 1019, 1075, 1350
NheI	GCTAGC	1 cut(s)	637
NlaIII	CATG	7 cut(s)	305, 918, 954, 991, 1046, 1229, 1544
NlaIV	GGNNCC	5 cut(s)	285, 726, 727, 993, 1537
NmeAIII	GCCGAG	2 cut(s)	109, 904
NruI	TCGCGA	1 cut(s)	492
NspI	RCATGY	1 cut(s)	918
NspV	TTCGAA	1 cut(s)	356
PctI	GAATGC	1 cut(s)	870
PfeI	GAWTC	7 cut(s)	20, 197, 317, 353, 395, 454, 1588
PflFI	GACNNNGTC	1 cut(s)	767
PkrI	GCNGC	6 cut(s)	31, 331, 1036, 1194, 1286, 1315
PleI	GAGTC	2 cut(s)	185, 1564
PpsI	GAGTC	2 cut(s)	185, 1564
Ppu21I	YACGTR	1 cut(s)	1085
PpuMI	RGGWCCY	1 cut(s)	725
Psp5II	RGGWCCY	1 cut(s)	725
Psp6I	CCWGG	2 cut(s)	467, 781
PspFI	CCCAGC	2 cut(s)	140, 671
PspGI	CCWGG	2 cut(s)	467, 781
PspN4I	GGNNCC	5 cut(s)	285, 726, 727, 993, 1537
PspPI	GGNCC	5 cut(s)	58, 465, 725, 844, 907
PspPPI	RGGWCCY	1 cut(s)	725
PsuI	RGATCY	2 cut(s)	796, 991
PsyI	GACNNNGTC	1 cut(s)	767
RruI	TCGCGA	1 cut(s)	492
RsaI	GTAC	2 cut(s)	1160, 1252
RsaNI	GTAC	2 cut(s)	1159, 1251
SaqAI	TTAA	2 cut(s)	1005, 1545
SatI	GCNGC	6 cut(s)	30, 330, 1035, 1193, 1285, 1314
Sau3AI	GATC	6 cut(s)	796, 859, 991, 1019, 1075, 1350
Sau96I	GGNCC	5 cut(s)	58, 465, 725, 844, 907
SchI	GAGTC	2 cut(s)	185, 1565
ScrFI	CCNGG	5 cut(s)	463, 464, 469, 517, 783
SduI	GDGCHC	1 cut(s)	1576
SfaNI	GCATC	2 cut(s)	725, 1588
SfcI	CTRYAG	1 cut(s)	1357
SfuI	TTCGAA	1 cut(s)	356
SinI	GGWCC	2 cut(s)	725, 844
SmaI	CCCGGG	1 cut(s)	464
SmlI	CTYRAG	1 cut(s)	1181
SmoI	CTYRAG	1 cut(s)	1181
Sse9I	AATT	6 cut(s)	433, 648, 971, 983, 1395, 1529
SsiI	CCGC	7 cut(s)	27, 30, 329, 549, 1166, 1402, 1469
SspMI	CTAG	4 cut(s)	408, 638, 869, 1109
StyD4I	CCNGG	5 cut(s)	461, 462, 467, 515, 781
StyI	CCWWGG	1 cut(s)	720
TaaI	ACNGT	3 cut(s)	443, 488, 844
TaiI	ACGT	2 cut(s)	1087, 1341
TaqI	TCGA	6 cut(s)	165, 356, 398, 590, 666, 862
TasI	AATT	6 cut(s)	433, 648, 971, 983, 1395, 1529
TatI	WGTACW	1 cut(s)	1158
TauI	GCSGC	2 cut(s)	32, 332
TfiI	GAWTC	7 cut(s)	20, 197, 317, 353, 395, 454, 1588
Tru1I	TTAA	2 cut(s)	1005, 1545
Tru9I	TTAA	2 cut(s)	1005, 1545
TscAI	CASTG	2 cut(s)	384, 949
TseI	GCWGC	4 cut(s)	1034, 1192, 1284, 1313
TspDTI	ATGAA	3 cut(s)	867, 956, 976
TspMI	CCCGGG	1 cut(s)	462
TspRI	CASTG	2 cut(s)	384, 949
Tth111I	GACNNNGTC	1 cut(s)	767
VpaK11BI	GGWCC	2 cut(s)	725, 844
XapI	RAATTY	4 cut(s)	433, 648, 983, 1529
XceI	RCATGY	1 cut(s)	918
XmaI	CCCGGG	1 cut(s)	462
XspI	CTAG	4 cut(s)	408, 638, 869, 1109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.