Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0010049

Physical Location & Seq

Genomic Coordinates Forward (+)

39690489 .. 39697374

Gene Structure 6886 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00246570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGGGTCGGAAGCTCAAAGACCCGTCAACTCTCAGCGACCCAGAAGCCGAAGAAGCCACCAACCACCGCGAAGTCAAAGCCGAGAAGAAGAAAAAGAAGCACAAAAACAAACACAGAGACGAAGAAGAAGTGGAAGATGACCAACTCAGTCCTCCTAAGCGAAGGTTGGAGGAAGAAAATTCAGAGTCTAAAAAGAAGAAGAAGAAGAAGCACAAGAAATCGAAAGAGAGCGTAAACAATGAGGAGGAGCCGAAGAGAAATGGAGATGTGGAAGAGAGTAATTCCACTGATGCGGTTGTGATGGTTACTGGGAAAGATGCGAATGAAGCCAAATACAAGCCGTTGGATTCGTTCGCGGAGTCGAAGCTTCCCGGTGAGGTATTACAGTGCTGTGTGAATTTCCAGAGACCCTCTCCGATTCAGTCCCGGGCGTGGCCTTTCTTGTTGGACGGTCGTGATTTTATCGGAATTGCGAAAACTGGGTCAGGTAAGACTTTGGCGTTTGGGATACCAGCTATTAATCAGGTGTTGAATAAGAGGAATGGTAAGTTTTCGAGGGGGAGATATCCTCTTTGTCTTGTGCTCGCACCTACGAGGGAGCTAGCTCAACAACTTATTTCTGTGAAAGAGGCAAGAAATCACCATCTTATCTTCTGGTGGCAGATTTCAGATGTACTGGTTGAGGCTGGGAAATCTTGTGGTGTGGAATCAGTTTGTTTGTATGGAGGAACATCTAAAGGACCTCAAATATCTTCTCTGAAATCTGGTGTGGACATCGTTATTGGAACACCTGGTCGTTTGAAGGATCTCATTGAAATGGGTTTGTGTTGCCTTAAGGAAGTATCTTTTGCGGTCCTTGATGAAGCAGATAGAATGCTTGACATGGGATTTGAACCTGAAGTCCGCTATATACTGGGACAGACATGCTCGGCTCGCCAAATGGTAATGTTCAGTGCGACATGGCCTCCATCGGTTCATCAGTTAGCTCAGGAGTTCATGGATCCTAATCCAGTTAAGGTGGTTGTTGGTTCAGAGGATTTAGCTGCCAACCATGATGTCCTGCAGATAGTCGAGGTCTTGGATGATCGATCTCGCGATGGGCGTTTGGTTGCTTTGCTTGAAAAATACCACAAATCCAAAGGAAACAGGGTTTTGGTGTTTGTCTTGTACAAAATGGAAGCTACTCGTGTTGAAAATATGTTGCAAAGAGGGGGTTGGAAGGTCTGTTCTATACATGGTGATAAAGCACAAAATCAGCGTACACAGGCACTATCTCTATTTAAGCAGGGAAGCTGTCCCTTGATGATTGCTACTGATGTGGCTGCTCGAGGATTAGATATCCCAGATGTTGAGGTAGTGATTAACTATAGTTTTCCACTCACTACCGAGGATTATGTCCACAGAATTGGGCGCACTGGACGGGCCGGTAAGAAGGGTGTCGCTCATACCTTTTTCACACATCACAACAAGGGACTTGCTGGGGAGCTGGTCAATGTTCTCAGAGAAGCTGGGCAAAATGTGCCAGCTGACTTGTTGAAATTTGGCACTCATGTAAAGAAAAAGGAATCCAAACTTTATGGGGCTCACTTCAGAGAAATTTCTGCTGATGCTCCAAAGGCTAAAAAGATCACGTTCGCTGACTCTGATGATGAAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

552

Amino Acids

61.58

Weight (kDa)

8.75

Isoelectric Point (pI)

36.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	138 - 327	3.6e-42	DEAD/DEAH box helicase
Helicase_C	PF00271	372 - 476	2.3e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31970
fragaria_vesca	FvH4_5g23490
malus_domestica	MD00G1068700.v1.1 MD06G1023800.v1.1
prunus_persica	Prupe.5G024900_v2.0.a1
pyrus_communis	pycom16g25290
rosa_chinensis	RchiOBHm_Chr7g0212761
rosa_laevigata	RLG00000002870
rosa_multiflora	Rmu_sc0000394.1_g000033 Rmu_sc0008336.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246570 Rroxscaffold_3G00250790 Rroxscaffold_4G00321740 Rroxscaffold_4G00321750
rosa_rugosa	Rorug07G0136500
rosa_samantha	Rh7BG263500 Rh7CG287100
rosa_wichuraiana	Rw7G023130 Rw7G023160 Rw7G023230 Rw7G023270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	69, 356, 1095
AciI	CCGC	5 cut(s)	67, 293, 356, 851, 904
AclWI	GGATC	3 cut(s)	813, 995, 1008
AcsI	RAATTY	4 cut(s)	178, 397, 1538, 1596
AcuI	CTGAAG	2 cut(s)	918, 1573
AfaI	GTAC	3 cut(s)	675, 1169, 1261
AfiI	CCNNNNNNNGG	1 cut(s)	432
AflII	CTTAAG	1 cut(s)	833
AgsI	TTSAA	7 cut(s)	532, 802, 815, 893, 1121, 1193, 1537
AjnI	CCWGG	1 cut(s)	790
AloI	GAACNNNNNNTCC	4 cut(s)	885, 917, 1210, 1242
Alw21I	GWGCWC	1 cut(s)	585
Alw26I	GTCTC	2 cut(s)	111, 400
AlwI	GGATC	3 cut(s)	813, 995, 1008
Ama87I	CYCGRG	2 cut(s)	426, 1326
AoxI	GGCC	3 cut(s)	434, 962, 1422
ApeKI	GCWGC	2 cut(s)	1043, 1322
ApoI	RAATTY	4 cut(s)	178, 397, 1538, 1596
ArsI	GACNNNNNNTTYG	4 cut(s)	467, 499, 872, 904
AseI	ATTAAT	1 cut(s)	519
AspLEI	GCGC	1 cut(s)	1413
AspS9I	GGNCC	3 cut(s)	740, 853, 1422
AsuC2I	CCSGG	3 cut(s)	372, 427, 428
AsuHPI	GGTGA	3 cut(s)	386, 632, 1250
AsuNHI	GCTAGC	1 cut(s)	601
AvaI	CYCGRG	2 cut(s)	426, 1326
AvaII	GGWCC	2 cut(s)	740, 853
BamHI	GGATCC	1 cut(s)	1000
BanII	GRGCYC	1 cut(s)	1585
BauI	CACGAG	1 cut(s)	1185
Bbv12I	GWGCWC	1 cut(s)	585
BbvI	GCAGC	2 cut(s)	1030, 1309
BccI	CCATC	4 cut(s)	295, 651, 976, 1091
BceAI	ACGGC	1 cut(s)	325
BciT130I	CCWGG	1 cut(s)	792
BciVI	GTATCC	1 cut(s)	501
BcnI	CCSGG	3 cut(s)	372, 427, 428
BcoDI	GTCTC	2 cut(s)	111, 400
BfaI	CTAG	1 cut(s)	602
BfmI	CTRYAG	2 cut(s)	1061, 1366
BfrI	CTTAAG	1 cut(s)	833
BfuI	GTATCC	1 cut(s)	501
BisI	GCNGC	2 cut(s)	1044, 1323
BlsI	GCNGC	2 cut(s)	1045, 1324
Bme1390I	CCNGG	4 cut(s)	372, 427, 428, 792
Bme18I	GGWCC	2 cut(s)	740, 853
BmeT110I	CYCGRG	2 cut(s)	426, 1326
BmgT120I	GGNCC	3 cut(s)	740, 853, 1422
BmiI	GGNNCC	2 cut(s)	249, 1002
BmrFI	CCNGG	4 cut(s)	372, 427, 428, 792
BmrI	ACTGGG	3 cut(s)	318, 489, 923
BmsI	GCATC	3 cut(s)	280, 307, 1597
BmtI	GCTAGC	1 cut(s)	605
BmuI	ACTGGG	3 cut(s)	318, 489, 923
BplI	GAGNNNNNCTC	4 cut(s)	397, 429, 553, 585
Bpu10I	CCTNAGC	2 cut(s)	156, 987
BpuMI	CCSGG	3 cut(s)	372, 427, 428
Bsa29I	ATCGAT	1 cut(s)	1087
BsaBI	GATNNNNATC	1 cut(s)	1005
BsaI	GGTCTC	1 cut(s)	400
BsaJI	CCNNGG	2 cut(s)	426, 1386
BsaXI	ACNNNNNCTCC	2 cut(s)	949, 979
Bsc4I	CCNNNNNNNGG	1 cut(s)	432
Bse118I	RCCGGY	1 cut(s)	1424
Bse1I	ACTGG	6 cut(s)	313, 484, 681, 918, 1010, 1420
Bse8I	GATNNNNATC	1 cut(s)	1005
BseBI	CCWGG	1 cut(s)	792
BseCI	ATCGAT	1 cut(s)	1087
BseDI	CCNNGG	2 cut(s)	426, 1386
BseGI	GGATG	1 cut(s)	1087
BseJI	GATNNNNATC	1 cut(s)	1005
BseLI	CCNNNNNNNGG	1 cut(s)	432
BseMII	CTCAG	4 cut(s)	46, 160, 1001, 1513
BseNI	ACTGG	6 cut(s)	313, 484, 681, 918, 1010, 1420
BseRI	GAGGAG	2 cut(s)	257, 260
BseXI	GCAGC	2 cut(s)	1030, 1309
BseYI	CCCAGC	3 cut(s)	686, 1478, 1508
Bsh1236I	CGCG	3 cut(s)	69, 356, 1095
Bsh1285I	CGRYCG	1 cut(s)	454
BshFI	GGCC	3 cut(s)	436, 964, 1424
BshVI	ATCGAT	1 cut(s)	1087
BsiEI	CGRYCG	1 cut(s)	454
BsiHKAI	GWGCWC	1 cut(s)	585
BsiHKCI	CYCGRG	2 cut(s)	426, 1326
BsiSI	CCGG	3 cut(s)	372, 427, 1425
BslFI	GGGAC	4 cut(s)	409, 930, 1281, 1485
BslI	CCNNNNNNNGG	1 cut(s)	432
BsmAI	GTCTC	2 cut(s)	111, 400
BsmBI	CGTCTC	1 cut(s)	111
BsmFI	GGGAC	4 cut(s)	409, 930, 1281, 1485
BsmI	GAATGC	1 cut(s)	879
BsnI	GGCC	3 cut(s)	436, 964, 1424
Bso31I	GGTCTC	1 cut(s)	400
BsoBI	CYCGRG	2 cut(s)	426, 1326
Bsp1286I	GDGCHC	2 cut(s)	585, 1585
Bsp1407I	TGTACA	1 cut(s)	1167
Bsp143I	GATC	5 cut(s)	805, 1000, 1084, 1088, 1626
Bsp68I	TCGCGA	1 cut(s)	1095
BspACI	CCGC	5 cut(s)	67, 293, 356, 851, 904
BspANI	GGCC	3 cut(s)	436, 964, 1424
BspCNI	CTCAG	4 cut(s)	45, 159, 1000, 1512
BspDI	ATCGAT	1 cut(s)	1087
BspFNI	CGCG	3 cut(s)	69, 356, 1095
BspLI	GGNNCC	2 cut(s)	249, 1002
BspMAI	CTGCAG	1 cut(s)	1065
BspOI	GCTAGC	1 cut(s)	605
BspPI	GGATC	3 cut(s)	813, 995, 1008
BspTI	CTTAAG	1 cut(s)	833
BspTNI	GGTCTC	1 cut(s)	400
BsrFI	RCCGGY	1 cut(s)	1424
BsrGI	TGTACA	1 cut(s)	1167
BsrI	ACTGG	6 cut(s)	313, 484, 681, 918, 1010, 1420
BssAI	RCCGGY	1 cut(s)	1424
BssECI	CCNNGG	2 cut(s)	426, 1386
BssMI	GATC	5 cut(s)	805, 1000, 1084, 1088, 1626
BssSI	CACGAG	1 cut(s)	1185
Bst2BI	CACGAG	1 cut(s)	1185
Bst2UI	CCWGG	1 cut(s)	792
Bst4CI	ACNGT	2 cut(s)	387, 452
Bst6I	CTCTTC	2 cut(s)	248, 267
BstAFI	CTTAAG	1 cut(s)	833
BstAPI	GCANNNNNTGC	1 cut(s)	1519
BstAUI	TGTACA	1 cut(s)	1167
BstC8I	GCNNGC	4 cut(s)	585, 603, 934, 1524
BstDEI	CTNAG	5 cut(s)	32, 146, 156, 987, 1499
BstF5I	GGATG	1 cut(s)	1087
BstFNI	CGCG	3 cut(s)	69, 356, 1095
BstHHI	GCGC	1 cut(s)	1413
BstKTI	GATC	5 cut(s)	808, 1003, 1087, 1091, 1629
BstMAI	GTCTC	2 cut(s)	111, 400
BstMBI	GATC	5 cut(s)	805, 1000, 1084, 1088, 1626
BstMCI	CGRYCG	1 cut(s)	454
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 326, 933, 1519, 1616
BstNI	CCWGG	1 cut(s)	792
BstNSI	RCATGY	1 cut(s)	927
BstSCI	CCNGG	4 cut(s)	370, 425, 426, 790
BstSFI	CTRYAG	2 cut(s)	1061, 1366
BstUI	CGCG	3 cut(s)	69, 356, 1095
BstV1I	GCAGC	2 cut(s)	1030, 1309
BstX2I	RGATCY	2 cut(s)	805, 1000
BstXI	CCANNNNNNTGG	1 cut(s)	1406
BstYI	RGATCY	2 cut(s)	805, 1000
Bsu15I	ATCGAT	1 cut(s)	1087
BsuI	GTATCC	1 cut(s)	501
BsuRI	GGCC	3 cut(s)	436, 964, 1424
BsuTUI	ATCGAT	1 cut(s)	1087
BtgZI	GCGATG	1 cut(s)	1110
BtsCI	GGATG	1 cut(s)	1087
BtsIMutI	CAGTG	4 cut(s)	285, 392, 958, 1413
BtuMI	TCGCGA	1 cut(s)	1095
Cac8I	GCNNGC	4 cut(s)	585, 603, 934, 1524
CfoI	GCGC	1 cut(s)	1413
Cfr10I	RCCGGY	1 cut(s)	1424
Cfr13I	GGNCC	3 cut(s)	740, 853, 1422
Cfr9I	CCCGGG	1 cut(s)	426
ClaI	ATCGAT	1 cut(s)	1087
CsiI	ACCWGGT	1 cut(s)	790
Csp6I	GTAC	3 cut(s)	674, 1168, 1260
CviAII	CATG	7 cut(s)	883, 924, 960, 997, 1052, 1235, 1550
CviQI	GTAC	3 cut(s)	674, 1168, 1260
DdeI	CTNAG	5 cut(s)	32, 146, 156, 987, 1499
DpnI	GATC	5 cut(s)	807, 1002, 1086, 1090, 1628
DpnII	GATC	5 cut(s)	805, 1000, 1084, 1088, 1626
Eam1104I	CTCTTC	2 cut(s)	248, 267
EarI	CTCTTC	2 cut(s)	248, 267
Eco24I	GRGCYC	1 cut(s)	1585
Eco31I	GGTCTC	1 cut(s)	400
Eco32I	GATATC	2 cut(s)	566, 1339
Eco47I	GGWCC	2 cut(s)	740, 853
Eco57I	CTGAAG	2 cut(s)	918, 1573
Eco88I	CYCGRG	2 cut(s)	426, 1326
EcoO109I	RGGNCCY	1 cut(s)	740
EcoRII	CCWGG	1 cut(s)	790
EcoRV	GATATC	2 cut(s)	566, 1339
EcoT38I	GRGCYC	1 cut(s)	1585
Esp3I	CGTCTC	1 cut(s)	111
FaeI	CATG	7 cut(s)	886, 927, 963, 1000, 1055, 1238, 1553
FaqI	GGGAC	4 cut(s)	409, 930, 1281, 1485
FatI	CATG	7 cut(s)	882, 923, 959, 996, 1051, 1234, 1549
Fnu4HI	GCNGC	2 cut(s)	1044, 1323
FokI	GGATG	1 cut(s)	1094
FriOI	GRGCYC	1 cut(s)	1585
Fsp4HI	GCNGC	2 cut(s)	1044, 1323
FspBI	CTAG	1 cut(s)	602
GlaI	GCGC	1 cut(s)	1412
GluI	GCNGC	2 cut(s)	1044, 1323
GsaI	CCCAGC	3 cut(s)	690, 1482, 1512
HaeIII	GGCC	3 cut(s)	436, 964, 1424
HapII	CCGG	3 cut(s)	372, 427, 1425
HhaI	GCGC	1 cut(s)	1413
Hin1II	CATG	7 cut(s)	886, 927, 963, 1000, 1055, 1238, 1553
Hin6I	GCGC	1 cut(s)	1411
HinP1I	GCGC	1 cut(s)	1411
HincII	GTYRAC	1 cut(s)	27
HindII	GTYRAC	1 cut(s)	27
HindIII	AAGCTT	1 cut(s)	365
HinfI	GANTC	7 cut(s)	185, 347, 359, 418, 707, 1565, 1640
HpaII	CCGG	3 cut(s)	372, 427, 1425
HphI	GGTGA	3 cut(s)	386, 632, 1250
Hpy166II	GTNNAC	5 cut(s)	27, 235, 772, 1262, 1399
Hpy188III	TCNNGA	4 cut(s)	403, 455, 989, 1094
Hpy8I	GTNNAC	5 cut(s)	27, 235, 772, 1262, 1399
HpyAV	CCTTC	4 cut(s)	156, 796, 1213, 1426
HpyCH4III	ACNGT	2 cut(s)	387, 452
HpyCH4IV	ACGT	1 cut(s)	1631
HpyCH4V	TGCA	2 cut(s)	1063, 1204
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 326, 933, 1519, 1616
HpyF3I	CTNAG	5 cut(s)	32, 146, 156, 987, 1499
HpySE526I	ACGT	1 cut(s)	1631
Hsp92II	CATG	7 cut(s)	886, 927, 963, 1000, 1055, 1238, 1553
HspAI	GCGC	1 cut(s)	1411
Kzo9I	GATC	5 cut(s)	805, 1000, 1084, 1088, 1626
LmnI	GCTCC	4 cut(s)	247, 598, 1483, 1615
Lsp1109I	GCAGC	2 cut(s)	1030, 1309
LweI	GCATC	3 cut(s)	280, 307, 1597
MabI	ACCWGGT	1 cut(s)	790
MaeI	CTAG	1 cut(s)	602
MaeII	ACGT	1 cut(s)	1631
MaeIII	GTNAC	1 cut(s)	304
MalI	GATC	5 cut(s)	807, 1002, 1086, 1090, 1628
MboI	GATC	5 cut(s)	805, 1000, 1084, 1088, 1626
MflI	RGATCY	2 cut(s)	805, 1000
MhlI	GDGCHC	2 cut(s)	585, 1585
MluCI	AATT	7 cut(s)	178, 280, 397, 468, 1404, 1538, 1596
MlyI	GAGTC	3 cut(s)	194, 368, 1634
MmeI	TCCRAC	4 cut(s)	147, 324, 426, 1196
MseI	TTAA	5 cut(s)	519, 834, 1014, 1281, 1362
MslI	CAYNNNNRTG	1 cut(s)	815
MspA1I	CMGCKG	1 cut(s)	1526
MspCI	CTTAAG	1 cut(s)	833
MspI	CCGG	3 cut(s)	372, 427, 1425
MspR9I	CCNGG	4 cut(s)	372, 427, 428, 792
Mva1269I	GAATGC	1 cut(s)	879
MvaI	CCWGG	1 cut(s)	792
MvnI	CGCG	3 cut(s)	69, 356, 1095
MwoI	GCNNNNNNNGC	5 cut(s)	53, 326, 933, 1519, 1616
NciI	CCSGG	3 cut(s)	372, 427, 428
NdeII	GATC	5 cut(s)	805, 1000, 1084, 1088, 1626
NheI	GCTAGC	1 cut(s)	601
NlaIII	CATG	7 cut(s)	886, 927, 963, 1000, 1055, 1238, 1553
NlaIV	GGNNCC	2 cut(s)	249, 1002
NmeAIII	GCCGAG	2 cut(s)	106, 908
NruI	TCGCGA	1 cut(s)	1095
NspI	RCATGY	1 cut(s)	927
PaeR7I	CTCGAG	1 cut(s)	1326
PcsI	WCGNNNNNNNCGW	1 cut(s)	1099
PctI	GAATGC	1 cut(s)	879
PfeI	GAWTC	4 cut(s)	347, 418, 707, 1565
PkrI	GCNGC	2 cut(s)	1045, 1324
PleI	GAGTC	3 cut(s)	193, 367, 1634
PpsI	GAGTC	3 cut(s)	193, 367, 1634
PpuMI	RGGWCCY	1 cut(s)	740
PshBI	ATTAAT	1 cut(s)	519
Psp5II	RGGWCCY	1 cut(s)	740
Psp6I	CCWGG	1 cut(s)	790
PspFI	CCCAGC	3 cut(s)	686, 1478, 1508
PspGI	CCWGG	1 cut(s)	790
PspN4I	GGNNCC	2 cut(s)	249, 1002
PspPI	GGNCC	3 cut(s)	740, 853, 1422
PspPPI	RGGWCCY	1 cut(s)	740
PspXI	VCTCGAGB	1 cut(s)	1326
PstI	CTGCAG	1 cut(s)	1065
PsuI	RGATCY	2 cut(s)	805, 1000
PvuII	CAGCTG	1 cut(s)	1526
RruI	TCGCGA	1 cut(s)	1095
RsaI	GTAC	3 cut(s)	675, 1169, 1261
RsaNI	GTAC	3 cut(s)	674, 1168, 1260
RseI	CAYNNNNRTG	1 cut(s)	815
SaqAI	TTAA	5 cut(s)	519, 834, 1014, 1281, 1362
SatI	GCNGC	2 cut(s)	1044, 1323
Sau3AI	GATC	5 cut(s)	805, 1000, 1084, 1088, 1626
Sau96I	GGNCC	3 cut(s)	740, 853, 1422
SchI	GAGTC	3 cut(s)	194, 368, 1634
ScrFI	CCNGG	4 cut(s)	372, 427, 428, 792
SduI	GDGCHC	2 cut(s)	585, 1585
SexAI	ACCWGGT	1 cut(s)	790
SfaNI	GCATC	3 cut(s)	280, 307, 1597
SfcI	CTRYAG	2 cut(s)	1061, 1366
Sfr274I	CTCGAG	1 cut(s)	1326
SinI	GGWCC	2 cut(s)	740, 853
SlaI	CTCGAG	1 cut(s)	1326
SmaI	CCCGGG	1 cut(s)	428
SmiMI	CAYNNNNRTG	1 cut(s)	815
SmlI	CTYRAG	2 cut(s)	833, 1326
SmoI	CTYRAG	2 cut(s)	833, 1326
Sse9I	AATT	7 cut(s)	178, 280, 397, 468, 1404, 1538, 1596
SsiI	CCGC	5 cut(s)	67, 293, 356, 851, 904
SspMI	CTAG	1 cut(s)	602
StyD4I	CCNGG	4 cut(s)	370, 425, 426, 790
TaaI	ACNGT	2 cut(s)	387, 452
TaiI	ACGT	1 cut(s)	1634
TaqI	TCGA	6 cut(s)	221, 362, 554, 1071, 1087, 1327
TasI	AATT	7 cut(s)	178, 280, 397, 468, 1404, 1538, 1596
TatI	WGTACW	2 cut(s)	673, 1167
TfiI	GAWTC	4 cut(s)	347, 418, 707, 1565
Tru1I	TTAA	5 cut(s)	519, 834, 1014, 1281, 1362
Tru9I	TTAA	5 cut(s)	519, 834, 1014, 1281, 1362
TscAI	CASTG	4 cut(s)	292, 392, 958, 1420
TseI	GCWGC	2 cut(s)	1043, 1322
TspDTI	ATGAA	4 cut(s)	339, 876, 965, 985
TspMI	CCCGGG	1 cut(s)	426
TspRI	CASTG	4 cut(s)	292, 392, 958, 1420
Vha464I	CTTAAG	1 cut(s)	833
VpaK11BI	GGWCC	2 cut(s)	740, 853
VspI	ATTAAT	1 cut(s)	519
XapI	RAATTY	4 cut(s)	178, 397, 1538, 1596
XceI	RCATGY	1 cut(s)	927
XhoI	CTCGAG	1 cut(s)	1326
XmaI	CCCGGG	1 cut(s)	426
XspI	CTAG	1 cut(s)	602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.