Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0010049

Physical Location & Seq

Genomic Coordinates Reverse (-)

29172387 .. 29178859

Gene Structure 6473 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG287100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGGTCGGAAGCTCAAAGACCCCTCAACTCTCAGCGACCCAGAAGCCCAGGAAGCCACGAACCACCGCGAAGCCAAAGCCGAGAAGAAGAAAAAGAAGCACAAAAACAAACACAGAGACGAAGAAGAAGAAGAAGATGACCAACTCAGTCCTCCTAAGCGAAAGTTGGAGGAAGAAAATTCAGATTCTAAAAAGAAGAAGAAGAAGCACAAGAAATCGAAAGAGAGCGTAAACAATGAGGAGCCGAAGAGAAATGGAGAAGTGGAAGAGAGTAATTCCACGGATGCGGTTGTGATGGTTACTGGGAAAGATGCTGATGAAGCCAAATACAAGCCGTTGGATTCGTTCGCAGAGTCGAAGCTTCCCAGTGAGGTTTTACAGTGCTGTGTGAATTTCCAGAGACCCTCTCCGATTCAGTCCCGGGCGTGGCCTTTCTTGTTGGACGGTCGTGATTTTATTGGAATTGCGAAAACCGGGTCAGGTAAGACTTTGGCGTTTGGGATACCGGCTATTAATCAGGTGTTGAATAAGAGGAATGGTAAGTTTTCGAGGGGGAGATATCCTCTTTGTCTTGTGCTCGCACCTACAAGGGAGCTAGCTCAACAAATTTCAGATGTACTGGTTGAGGCTGGGAAATCTTGTGGTGTGGAATCTGTTTGTTTGTATGGAGGAACATCTAAAGGACCTCAAATATCTTCTCTGAAATCTGGTGTGGACATCGTTATTGGAACACCTGGTCGTTTGAAGGATCTCATTGAAATGGGTTTGTGTTGCCTTAAGGAAGTATCTTTTGCGGTCCTTGATGAAGCAGATAGAATGCTTGACATGGGATTTGAACCTGAAGTCCGCTATATACTGGGACAGACATGCTCGGCTCGCCAAATGGTAATGTTCAGCGCAACTTGGCCTCCATCAGTTCATCAGTTAGCTCAGGAGTTCATGGATCCTAATCCAGTTAAGGTGGTTGTTGGTTCAGAGGATTTAGCTGCCAACCATGATGTCCTGCAGATAGTCGAGGTCTTGGATGATCGATCTCGCGATGGGCGTTTGGTTGCTTTGCTAGAAAAATACCACAAATCCAAAGGAAACAGAGTTTTGGTGTTTGTCTTGTACAAAATGGAAGCTACTCGTGTTGAAAATATGCTGCAAAGAGGGGGTTGGAAGGTCTGTTCTATACATGGTGATAAAGCACAAAATCAGCGCACACAGGCACTATCTCTATTTAAGCAGGGAAGCTGTCCCTTGATGATTGCTACTGATGTGGCTGCTCGGGGATTAGATATCCCAGATGTTGAGGTAGTGATTAACTATAGTTTTCCACTCACAACCGAGGATTATGTCCACAGAATTGGGCGTACTGGACGGGCTGGTAAGAAGGGTGTCGCTCATACCTTTTTCACTCATCACAACAAGGGACTTGCTGGGGAGCTGGTCAATGTTCTCAAAGAAGCTGGGCAAAATGTGCCAGCTGACTTGTTGAAGTTTGGCACTCATGTAAAGAAAAAGGAATCCAAACTTTATGGGGCTCACTTCAGAGAAATTTCTGCCGATGCTCCAAAGGCTAAAAAGATCACATTCGCTGACTCTGATGATGAAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

533

Amino Acids

59.14

Weight (kDa)

8.58

Isoelectric Point (pI)

35.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	136 - 308	4.5e-47	DEAD/DEAH box helicase
Helicase_C	PF00271	353 - 457	2.1e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31970
fragaria_vesca	FvH4_5g23490
malus_domestica	MD00G1068700.v1.1 MD06G1023800.v1.1
prunus_persica	Prupe.5G024900_v2.0.a1
pyrus_communis	pycom16g25290
rosa_chinensis	RchiOBHm_Chr7g0212761
rosa_laevigata	RLG00000002870
rosa_multiflora	Rmu_sc0000394.1_g000033 Rmu_sc0008336.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246570 Rroxscaffold_3G00250790 Rroxscaffold_4G00321740 Rroxscaffold_4G00321750
rosa_rugosa	Rorug07G0136500
rosa_samantha	Rh7BG263500 Rh7CG287100
rosa_wichuraiana	Rw7G023130 Rw7G023160 Rw7G023230 Rw7G023270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	69, 1038
AciI	CCGC	4 cut(s)	67, 287, 794, 847
AclWI	GGATC	3 cut(s)	756, 938, 951
AcsI	RAATTY	4 cut(s)	178, 391, 606, 1539
AcuI	CTGAAG	2 cut(s)	861, 1516
AfaI	GTAC	3 cut(s)	618, 1112, 1357
AfiI	CCNNNNNNNGG	1 cut(s)	426
AflII	CTTAAG	1 cut(s)	776
AgsI	TTSAA	6 cut(s)	526, 745, 758, 836, 1136, 1480
AjnI	CCWGG	2 cut(s)	48, 733
AloI	GAACNNNNNNTCC	4 cut(s)	828, 860, 1153, 1185
Alw21I	GWGCWC	1 cut(s)	579
Alw26I	GTCTC	2 cut(s)	111, 394
AlwI	GGATC	3 cut(s)	756, 938, 951
Ama87I	CYCGRG	2 cut(s)	420, 1269
AoxI	GGCC	2 cut(s)	428, 905
ApeKI	GCWGC	3 cut(s)	986, 1144, 1265
ApoI	RAATTY	4 cut(s)	178, 391, 606, 1539
ArsI	GACNNNNNNTTYG	4 cut(s)	461, 493, 815, 847
AseI	ATTAAT	1 cut(s)	513
AspLEI	GCGC	2 cut(s)	899, 1203
AspS9I	GGNCC	2 cut(s)	683, 796
AsuC2I	CCSGG	3 cut(s)	421, 422, 475
AsuHPI	GGTGA	1 cut(s)	1193
AsuNHI	GCTAGC	1 cut(s)	595
AvaI	CYCGRG	2 cut(s)	420, 1269
AvaII	GGWCC	2 cut(s)	683, 796
BamHI	GGATCC	1 cut(s)	943
BanII	GRGCYC	1 cut(s)	1528
BauI	CACGAG	1 cut(s)	1128
Bbv12I	GWGCWC	1 cut(s)	579
BbvI	GCAGC	3 cut(s)	973, 1131, 1252
BccI	CCATC	3 cut(s)	289, 919, 1034
BceAI	ACGGC	1 cut(s)	319
BciT130I	CCWGG	2 cut(s)	50, 735
BciVI	GTATCC	1 cut(s)	495
BcnI	CCSGG	3 cut(s)	421, 422, 475
BcoDI	GTCTC	2 cut(s)	111, 394
BfaI	CTAG	2 cut(s)	596, 1061
BfmI	CTRYAG	2 cut(s)	1004, 1309
BfrI	CTTAAG	1 cut(s)	776
BfuI	GTATCC	1 cut(s)	495
BisI	GCNGC	3 cut(s)	987, 1145, 1266
BlsI	GCNGC	3 cut(s)	988, 1146, 1267
Bme1390I	CCNGG	5 cut(s)	50, 421, 422, 475, 735
Bme18I	GGWCC	2 cut(s)	683, 796
BmeT110I	CYCGRG	2 cut(s)	420, 1269
BmgT120I	GGNCC	2 cut(s)	683, 796
BmiI	GGNNCC	2 cut(s)	243, 945
BmrFI	CCNGG	5 cut(s)	50, 421, 422, 475, 735
BmrI	ACTGGG	3 cut(s)	312, 360, 866
BmsI	GCATC	3 cut(s)	274, 301, 1540
BmtI	GCTAGC	1 cut(s)	599
BmuI	ACTGGG	3 cut(s)	312, 360, 866
BplI	GAGNNNNNCTC	4 cut(s)	391, 423, 547, 579
Bpu10I	CCTNAGC	2 cut(s)	156, 930
BpuMI	CCSGG	3 cut(s)	421, 422, 475
Bsa29I	ATCGAT	1 cut(s)	1030
BsaBI	GATNNNNATC	1 cut(s)	948
BsaI	GGTCTC	1 cut(s)	394
BsaJI	CCNNGG	4 cut(s)	48, 279, 420, 1329
BsaXI	ACNNNNNCTCC	2 cut(s)	892, 922
Bsc4I	CCNNNNNNNGG	1 cut(s)	426
Bse118I	RCCGGY	1 cut(s)	505
Bse1I	ACTGG	6 cut(s)	307, 366, 624, 861, 953, 1363
Bse8I	GATNNNNATC	1 cut(s)	948
BseBI	CCWGG	2 cut(s)	50, 735
BseCI	ATCGAT	1 cut(s)	1030
BseDI	CCNNGG	4 cut(s)	48, 279, 420, 1329
BseGI	GGATG	2 cut(s)	289, 1030
BseJI	GATNNNNATC	1 cut(s)	948
BseLI	CCNNNNNNNGG	1 cut(s)	426
BseMII	CTCAG	3 cut(s)	46, 160, 944
BseNI	ACTGG	6 cut(s)	307, 366, 624, 861, 953, 1363
BseRI	GAGGAG	1 cut(s)	254
BseXI	GCAGC	3 cut(s)	973, 1131, 1252
BseYI	CCCAGC	3 cut(s)	629, 1421, 1451
Bsh1236I	CGCG	2 cut(s)	69, 1038
Bsh1285I	CGRYCG	1 cut(s)	448
BshFI	GGCC	2 cut(s)	430, 907
BshVI	ATCGAT	1 cut(s)	1030
BsiEI	CGRYCG	1 cut(s)	448
BsiHKAI	GWGCWC	1 cut(s)	579
BsiHKCI	CYCGRG	2 cut(s)	420, 1269
BsiSI	CCGG	3 cut(s)	421, 474, 506
BslFI	GGGAC	4 cut(s)	403, 873, 1224, 1428
BslI	CCNNNNNNNGG	1 cut(s)	426
BsmAI	GTCTC	2 cut(s)	111, 394
BsmBI	CGTCTC	1 cut(s)	111
BsmFI	GGGAC	4 cut(s)	403, 873, 1224, 1428
BsmI	GAATGC	1 cut(s)	822
BsnI	GGCC	2 cut(s)	430, 907
Bso31I	GGTCTC	1 cut(s)	394
BsoBI	CYCGRG	2 cut(s)	420, 1269
Bsp1286I	GDGCHC	2 cut(s)	579, 1528
Bsp1407I	TGTACA	1 cut(s)	1110
Bsp143I	GATC	5 cut(s)	748, 943, 1027, 1031, 1569
Bsp68I	TCGCGA	1 cut(s)	1038
BspACI	CCGC	4 cut(s)	67, 287, 794, 847
BspANI	GGCC	2 cut(s)	430, 907
BspCNI	CTCAG	3 cut(s)	45, 159, 943
BspDI	ATCGAT	1 cut(s)	1030
BspFNI	CGCG	2 cut(s)	69, 1038
BspLI	GGNNCC	2 cut(s)	243, 945
BspMAI	CTGCAG	1 cut(s)	1008
BspOI	GCTAGC	1 cut(s)	599
BspPI	GGATC	3 cut(s)	756, 938, 951
BspTI	CTTAAG	1 cut(s)	776
BspTNI	GGTCTC	1 cut(s)	394
BsrFI	RCCGGY	1 cut(s)	505
BsrGI	TGTACA	1 cut(s)	1110
BsrI	ACTGG	6 cut(s)	307, 366, 624, 861, 953, 1363
BssAI	RCCGGY	1 cut(s)	505
BssECI	CCNNGG	4 cut(s)	48, 279, 420, 1329
BssMI	GATC	5 cut(s)	748, 943, 1027, 1031, 1569
BssSI	CACGAG	1 cut(s)	1128
Bst2BI	CACGAG	1 cut(s)	1128
Bst2UI	CCWGG	2 cut(s)	50, 735
Bst4CI	ACNGT	2 cut(s)	381, 446
Bst6I	CTCTTC	2 cut(s)	242, 261
BstAFI	CTTAAG	1 cut(s)	776
BstAPI	GCANNNNNTGC	1 cut(s)	1462
BstAUI	TGTACA	1 cut(s)	1110
BstC8I	GCNNGC	4 cut(s)	579, 597, 877, 1467
BstDEI	CTNAG	4 cut(s)	32, 146, 156, 930
BstDSI	CCRYGG	1 cut(s)	279
BstF5I	GGATG	2 cut(s)	289, 1030
BstFNI	CGCG	2 cut(s)	69, 1038
BstHHI	GCGC	2 cut(s)	899, 1203
BstKTI	GATC	5 cut(s)	751, 946, 1030, 1034, 1572
BstMAI	GTCTC	2 cut(s)	111, 394
BstMBI	GATC	5 cut(s)	748, 943, 1027, 1031, 1569
BstMCI	CGRYCG	1 cut(s)	448
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 320, 876, 1462, 1559
BstNI	CCWGG	2 cut(s)	50, 735
BstNSI	RCATGY	1 cut(s)	870
BstSCI	CCNGG	5 cut(s)	48, 419, 420, 473, 733
BstSFI	CTRYAG	2 cut(s)	1004, 1309
BstUI	CGCG	2 cut(s)	69, 1038
BstV1I	GCAGC	3 cut(s)	973, 1131, 1252
BstX2I	RGATCY	2 cut(s)	748, 943
BstXI	CCANNNNNNTGG	1 cut(s)	1349
BstYI	RGATCY	2 cut(s)	748, 943
Bsu15I	ATCGAT	1 cut(s)	1030
BsuI	GTATCC	1 cut(s)	495
BsuRI	GGCC	2 cut(s)	430, 907
BsuTUI	ATCGAT	1 cut(s)	1030
BtgI	CCRYGG	1 cut(s)	279
BtgZI	GCGATG	1 cut(s)	1053
BtsCI	GGATG	2 cut(s)	289, 1030
BtsIMutI	CAGTG	2 cut(s)	373, 386
BtuMI	TCGCGA	1 cut(s)	1038
Cac8I	GCNNGC	4 cut(s)	579, 597, 877, 1467
CfoI	GCGC	2 cut(s)	899, 1203
Cfr10I	RCCGGY	1 cut(s)	505
Cfr13I	GGNCC	2 cut(s)	683, 796
Cfr9I	CCCGGG	1 cut(s)	420
ClaI	ATCGAT	1 cut(s)	1030
CsiI	ACCWGGT	1 cut(s)	733
Csp6I	GTAC	3 cut(s)	617, 1111, 1356
CviAII	CATG	6 cut(s)	826, 867, 940, 995, 1178, 1493
CviQI	GTAC	3 cut(s)	617, 1111, 1356
DdeI	CTNAG	4 cut(s)	32, 146, 156, 930
DpnI	GATC	5 cut(s)	750, 945, 1029, 1033, 1571
DpnII	GATC	5 cut(s)	748, 943, 1027, 1031, 1569
Eam1104I	CTCTTC	2 cut(s)	242, 261
EarI	CTCTTC	2 cut(s)	242, 261
Eco24I	GRGCYC	1 cut(s)	1528
Eco31I	GGTCTC	1 cut(s)	394
Eco32I	GATATC	2 cut(s)	560, 1282
Eco47I	GGWCC	2 cut(s)	683, 796
Eco57I	CTGAAG	2 cut(s)	861, 1516
Eco88I	CYCGRG	2 cut(s)	420, 1269
EcoO109I	RGGNCCY	1 cut(s)	683
EcoRII	CCWGG	2 cut(s)	48, 733
EcoRV	GATATC	2 cut(s)	560, 1282
EcoT38I	GRGCYC	1 cut(s)	1528
Esp3I	CGTCTC	1 cut(s)	111
FaeI	CATG	6 cut(s)	829, 870, 943, 998, 1181, 1496
FaqI	GGGAC	4 cut(s)	403, 873, 1224, 1428
FatI	CATG	6 cut(s)	825, 866, 939, 994, 1177, 1492
Fnu4HI	GCNGC	3 cut(s)	987, 1145, 1266
FokI	GGATG	2 cut(s)	296, 1037
FriOI	GRGCYC	1 cut(s)	1528
Fsp4HI	GCNGC	3 cut(s)	987, 1145, 1266
FspBI	CTAG	2 cut(s)	596, 1061
GlaI	GCGC	2 cut(s)	898, 1202
GluI	GCNGC	3 cut(s)	987, 1145, 1266
GsaI	CCCAGC	3 cut(s)	633, 1425, 1455
HaeIII	GGCC	2 cut(s)	430, 907
HapII	CCGG	3 cut(s)	421, 474, 506
HhaI	GCGC	2 cut(s)	899, 1203
Hin1II	CATG	6 cut(s)	829, 870, 943, 998, 1181, 1496
Hin6I	GCGC	2 cut(s)	897, 1201
HinP1I	GCGC	2 cut(s)	897, 1201
HindIII	AAGCTT	1 cut(s)	359
HinfI	GANTC	7 cut(s)	185, 341, 353, 412, 650, 1508, 1583
HpaII	CCGG	3 cut(s)	421, 474, 506
HphI	GGTGA	1 cut(s)	1193
Hpy166II	GTNNAC	3 cut(s)	232, 715, 1342
Hpy188I	TCNGA	8 cut(s)	9, 184, 411, 613, 702, 976, 1535, 1588
Hpy188III	TCNNGA	4 cut(s)	397, 449, 932, 1037
Hpy8I	GTNNAC	3 cut(s)	232, 715, 1342
HpyAV	CCTTC	3 cut(s)	739, 1156, 1369
HpyCH4III	ACNGT	2 cut(s)	381, 446
HpyCH4V	TGCA	2 cut(s)	1006, 1147
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 320, 876, 1462, 1559
HpyF3I	CTNAG	4 cut(s)	32, 146, 156, 930
Hsp92II	CATG	6 cut(s)	829, 870, 943, 998, 1181, 1496
HspAI	GCGC	2 cut(s)	897, 1201
Kzo9I	GATC	5 cut(s)	748, 943, 1027, 1031, 1569
LmnI	GCTCC	4 cut(s)	241, 592, 1426, 1558
Lsp1109I	GCAGC	3 cut(s)	973, 1131, 1252
LweI	GCATC	3 cut(s)	274, 301, 1540
MabI	ACCWGGT	1 cut(s)	733
MaeI	CTAG	2 cut(s)	596, 1061
MaeIII	GTNAC	1 cut(s)	298
MalI	GATC	5 cut(s)	750, 945, 1029, 1033, 1571
MboI	GATC	5 cut(s)	748, 943, 1027, 1031, 1569
MflI	RGATCY	2 cut(s)	748, 943
MhlI	GDGCHC	2 cut(s)	579, 1528
MluCI	AATT	7 cut(s)	178, 274, 391, 462, 606, 1347, 1539
MlyI	GAGTC	2 cut(s)	362, 1577
MmeI	TCCRAC	4 cut(s)	147, 318, 420, 1139
MseI	TTAA	5 cut(s)	513, 777, 957, 1224, 1305
MslI	CAYNNNNRTG	1 cut(s)	758
MspA1I	CMGCKG	1 cut(s)	1469
MspCI	CTTAAG	1 cut(s)	776
MspI	CCGG	3 cut(s)	421, 474, 506
MspR9I	CCNGG	5 cut(s)	50, 421, 422, 475, 735
Mva1269I	GAATGC	1 cut(s)	822
MvaI	CCWGG	2 cut(s)	50, 735
MvnI	CGCG	2 cut(s)	69, 1038
MwoI	GCNNNNNNNGC	5 cut(s)	53, 320, 876, 1462, 1559
NciI	CCSGG	3 cut(s)	421, 422, 475
NdeII	GATC	5 cut(s)	748, 943, 1027, 1031, 1569
NheI	GCTAGC	1 cut(s)	595
NlaIII	CATG	6 cut(s)	829, 870, 943, 998, 1181, 1496
NlaIV	GGNNCC	2 cut(s)	243, 945
NmeAIII	GCCGAG	2 cut(s)	106, 851
NruI	TCGCGA	1 cut(s)	1038
NspI	RCATGY	1 cut(s)	870
PcsI	WCGNNNNNNNCGW	1 cut(s)	1042
PctI	GAATGC	1 cut(s)	822
PfeI	GAWTC	5 cut(s)	185, 341, 412, 650, 1508
PkrI	GCNGC	3 cut(s)	988, 1146, 1267
PleI	GAGTC	2 cut(s)	361, 1577
PpsI	GAGTC	2 cut(s)	361, 1577
PpuMI	RGGWCCY	1 cut(s)	683
PshBI	ATTAAT	1 cut(s)	513
Psp5II	RGGWCCY	1 cut(s)	683
Psp6I	CCWGG	2 cut(s)	48, 733
PspFI	CCCAGC	3 cut(s)	629, 1421, 1451
PspGI	CCWGG	2 cut(s)	48, 733
PspN4I	GGNNCC	2 cut(s)	243, 945
PspPI	GGNCC	2 cut(s)	683, 796
PspPPI	RGGWCCY	1 cut(s)	683
PstI	CTGCAG	1 cut(s)	1008
PsuI	RGATCY	2 cut(s)	748, 943
PvuII	CAGCTG	1 cut(s)	1469
RruI	TCGCGA	1 cut(s)	1038
RsaI	GTAC	3 cut(s)	618, 1112, 1357
RsaNI	GTAC	3 cut(s)	617, 1111, 1356
RseI	CAYNNNNRTG	1 cut(s)	758
SaqAI	TTAA	5 cut(s)	513, 777, 957, 1224, 1305
SatI	GCNGC	3 cut(s)	987, 1145, 1266
Sau3AI	GATC	5 cut(s)	748, 943, 1027, 1031, 1569
Sau96I	GGNCC	2 cut(s)	683, 796
SchI	GAGTC	2 cut(s)	362, 1577
ScrFI	CCNGG	5 cut(s)	50, 421, 422, 475, 735
SduI	GDGCHC	2 cut(s)	579, 1528
SexAI	ACCWGGT	1 cut(s)	733
SfaNI	GCATC	3 cut(s)	274, 301, 1540
SfcI	CTRYAG	2 cut(s)	1004, 1309
SinI	GGWCC	2 cut(s)	683, 796
SmaI	CCCGGG	1 cut(s)	422
SmiMI	CAYNNNNRTG	1 cut(s)	758
SmlI	CTYRAG	1 cut(s)	776
SmoI	CTYRAG	1 cut(s)	776
Sse9I	AATT	7 cut(s)	178, 274, 391, 462, 606, 1347, 1539
SsiI	CCGC	4 cut(s)	67, 287, 794, 847
SspMI	CTAG	2 cut(s)	596, 1061
StyD4I	CCNGG	5 cut(s)	48, 419, 420, 473, 733
TaaI	ACNGT	2 cut(s)	381, 446
TaqI	TCGA	5 cut(s)	218, 356, 548, 1014, 1030
TasI	AATT	7 cut(s)	178, 274, 391, 462, 606, 1347, 1539
TatI	WGTACW	2 cut(s)	616, 1110
TfiI	GAWTC	5 cut(s)	185, 341, 412, 650, 1508
Tru1I	TTAA	5 cut(s)	513, 777, 957, 1224, 1305
Tru9I	TTAA	5 cut(s)	513, 777, 957, 1224, 1305
TscAI	CASTG	2 cut(s)	373, 386
TseI	GCWGC	3 cut(s)	986, 1144, 1265
TspDTI	ATGAA	4 cut(s)	333, 819, 908, 928
TspGWI	ACGGA	1 cut(s)	296
TspMI	CCCGGG	1 cut(s)	420
TspRI	CASTG	2 cut(s)	373, 386
Vha464I	CTTAAG	1 cut(s)	776
VpaK11BI	GGWCC	2 cut(s)	683, 796
VspI	ATTAAT	1 cut(s)	513
XapI	RAATTY	4 cut(s)	178, 391, 606, 1539
XceI	RCATGY	1 cut(s)	870
XmaI	CCCGGG	1 cut(s)	420
XspI	CTAG	2 cut(s)	596, 1061

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.