Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0010049

Physical Location & Seq

Genomic Coordinates Reverse (-)

10728105 .. 10733376

Gene Structure 5272 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0136500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGAGAATCTGATCTCGCTAGTCAACAAAATCCAAAGAGCTTGCACGGCTCTCGGTGACCACGGCGAAGCCAACGCATTATCGTCTCTCTGGGACACGCTCCCCTCCATCGCCGTCGTCGGTGGCCAGAGTTCAGGGAAGTCTTCTGTCTTGGAGAGCTTTGTGGGGAAGGACTTCTTACCCCGTGGTTCTGGAATTGTTACTCGTCGTCCTCTTGTGTTGCAGCTTCATAAGATTGACGAACGTAGCAGTGAATATGCGGAGTTTCTCCACCTTCCGGGGAAAAGGTTCATATATTTTGCTGCCGTAAGAAAGGAAATTGCAGATGAGACAGATCGTGAAACTGGTCGCAGCAAAATGATCTCCAGCGTTCCAATTCATCTTAGCATATATTCTCCTAATGTTGCCAACTTGACACTTGTTGATCTTCCTGGGCTTACAAGAGTTGCTATTGCGGGTCAGCCAGATAGTATTGTGCAGGACATTGAAAATATGGTTCGCTCCTATATTGAGAAGCCCAACTGTATAATTTTAGCAATTTCACCTGCTAATCAAGATCTTGCTACATCTGATGCAATTAAAATCTCTCGTGAAGTGGATCCAACAGGGGAGAGGACAATCGGAGTCTTGACAAAAATTGATCTTATGGACAAGGGTACTGATGCAGTTGAAATATTGGAAGGAAAGTCTTATCGCCTAAAATTTCCTTGGGTTGGGGTGGTGAATCGCTCTCAAGCAGATATTAACAAGAATGTTGACATGATTGCTGCTCGGCGTAGAGAACGTGAATATTTTTCATTTACCCCCGAATACAAGCACCTTGCTCACAGAATGGGTTCTGAGTATCTAGCGAAAATGCTTTCTAAGCATTTGGAAACTGTAATTAAGACAAAAATCCCAGGCATCCGGTCCCTTATTAACGAGACCATTATTGAACTTGAAACTGAACTGAGTCATCTTGGAAAGCCCATTGCTACTGATGATATAGGGAAACATTATGCAATCATGGATATTTGTCGTCTATTTTATGAAATATATAAAGAACATCTTGATGGCGTGCGTCCTGGTCCTCCTGGAGGTGATGAGATTTGCGATGTTTTTTATGAGAAACTTCCTGCTCAGCTGGGAAACTTGCAATTTGATAAGTCACTTTCAGTAGAATATATAAGAAAGGTCATTACCCAAGCTGATGGGTATCAACCTCATCTAATAGCTCCCGAACAAGGATACCGTCGTCTCATAGAATCCTCGGTAATTAGGATAAAAGGTCCTGCTGAGGCTGCAGTCAATGCGGTTCATGACCTTCTGAAGGATCTTGTTCACAAGACTGTAAGTGAGACTCCGGAGCTAAGGCAGTATCCTGGTCTTAAAGCAGAGGTAACAAATGCAGCTTGCGCGTCACTTGAGAGAATGAGAGCAAAAAGCAAGAAAGCAACACTACAGTTAGTTGATATGGAGTGTATTTACCCGACAGTTGATTTCTTTCGTCAACTTCGTCAAGATGTTGACAAGGGTGGCAACCCATCACATCCACTGTCTGATAGATATAATGACTCTTATCTCAGTCGAATTGGGTCAAATGTTCTCGGCTATGTCAATATGGTTTGTGAAAGTTTACGCAAGTCTATTCCCAAATCTGTTGTTTATTGCCAAGTCAGAGTGGCAAAACGAGGCTTACTGGACCGTTTCTTCACCAATTTGCGTAACATGGAGACGAAGCAGTTGTCATCTTTGCTGAATGAGGATCCGGCAGTTGTGGAGAGGCGTACTGCCCTTGCGAAAAGGCTGGAGTTATACAGGAGTGCTCAGGCAGAGATTGATGCAGTTGCTTGGTCTGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

613

Amino Acids

68.65

Weight (kDa)

7.61

Isoelectric Point (pI)

43.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	37 - 213	1.3e-52	Dynamin family
Dynamin_M	PF01031	221 - 490	1.7e-63	Dynamin central region
GED	PF02212	517 - 609	6.6e-19	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31970
fragaria_vesca	FvH4_5g23490
malus_domestica	MD00G1068700.v1.1 MD06G1023800.v1.1
prunus_persica	Prupe.5G024900_v2.0.a1
pyrus_communis	pycom16g25290
rosa_chinensis	RchiOBHm_Chr7g0212761
rosa_laevigata	RLG00000002870
rosa_multiflora	Rmu_sc0000394.1_g000033 Rmu_sc0008336.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246570 Rroxscaffold_3G00250790 Rroxscaffold_4G00321740 Rroxscaffold_4G00321750
rosa_rugosa	Rorug07G0136500
rosa_samantha	Rh7BG263500 Rh7CG287100
rosa_wichuraiana	Rw7G023130 Rw7G023160 Rw7G023230 Rw7G023270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	553
Acc36I	ACCTGC	1 cut(s)	553
AccII	CGCG	1 cut(s)	1397
AccIII	TCCGGA	1 cut(s)	1342
AciI	CCGC	3 cut(s)	260, 455, 1292
AclWI	GGATC	5 cut(s)	593, 606, 1320, 1739, 1752
AcoI	YGGCCR	1 cut(s)	124
AcsI	RAATTY	1 cut(s)	701
AcuI	CTGAAG	1 cut(s)	1328
AfaI	GTAC	2 cut(s)	658, 1768
AfiI	CCNNNNNNNGG	5 cut(s)	277, 713, 1076, 1223, 1309
AgsI	TTSAA	4 cut(s)	488, 671, 935, 941
AjnI	CCWGG	5 cut(s)	430, 898, 1063, 1072, 1360
AluBI	AGCT	8 cut(s)	41, 159, 226, 1123, 1187, 1214, 1348, 1391
AluI	AGCT	8 cut(s)	41, 159, 226, 1123, 1187, 1214, 1348, 1391
Alw21I	GWGCWC	1 cut(s)	1807
Alw26I	GTCTC	6 cut(s)	90, 323, 917, 1241, 1331, 1706
AlwI	GGATC	5 cut(s)	593, 606, 1320, 1739, 1752
Aor13HI	TCCGGA	1 cut(s)	1342
AoxI	GGCC	1 cut(s)	124
ApeKI	GCWGC	6 cut(s)	223, 302, 351, 767, 1280, 1388
ApoI	RAATTY	1 cut(s)	701
ArsI	GACNNNNNNTTYG	2 cut(s)	1709, 1741
Asp700I	GAANNNNTTC	3 cut(s)	173, 287, 835
AspLEI	GCGC	1 cut(s)	1397
AspS9I	GGNCC	4 cut(s)	909, 1067, 1268, 1681
AsuC2I	CCSGG	1 cut(s)	279
AsuHPI	GGTGA	5 cut(s)	68, 534, 733, 1091, 1684
AvaII	GGWCC	4 cut(s)	909, 1067, 1268, 1681
BaeI	ACNNNNGTAYC	2 cut(s)	1219, 1252
BalI	TGGCCA	1 cut(s)	126
BamHI	GGATCC	2 cut(s)	598, 1744
BauI	CACGAG	1 cut(s)	588
BbsI	GAAGAC	1 cut(s)	135
Bbv12I	GWGCWC	1 cut(s)	1807
BbvCI	CCTCAGC	1 cut(s)	1275
BbvI	GCAGC	6 cut(s)	235, 289, 363, 754, 1267, 1400
BccI	CCATC	4 cut(s)	116, 1046, 1184, 1531
BceAI	ACGGC	4 cut(s)	63, 79, 98, 290
BcgI	CGANNNNNNTGC	2 cut(s)	34, 68
BciT130I	CCWGG	5 cut(s)	432, 900, 1065, 1074, 1362
BciVI	GTATCC	2 cut(s)	1220, 1368
BcnI	CCSGG	1 cut(s)	279
BcoDI	GTCTC	6 cut(s)	90, 323, 917, 1241, 1331, 1706
BfaI	CTAG	2 cut(s)	20, 848
BfmI	CTRYAG	2 cut(s)	1281, 1439
BfuAI	ACCTGC	1 cut(s)	553
BfuI	GTATCC	2 cut(s)	1220, 1368
BglII	AGATCT	1 cut(s)	556
BisI	GCNGC	6 cut(s)	224, 303, 352, 768, 1281, 1389
BlpI	GCTNAGC	1 cut(s)	1119
BlsI	GCNGC	6 cut(s)	225, 304, 353, 769, 1282, 1390
Bme1390I	CCNGG	6 cut(s)	279, 432, 900, 1065, 1074, 1362
Bme18I	GGWCC	4 cut(s)	909, 1067, 1268, 1681
BmgT120I	GGNCC	4 cut(s)	909, 1067, 1268, 1681
BmiI	GGNNCC	3 cut(s)	600, 911, 1746
BmrFI	CCNGG	6 cut(s)	279, 432, 900, 1065, 1074, 1362
BmsI	GCATC	4 cut(s)	562, 652, 912, 1810
BpiI	GAAGAC	1 cut(s)	135
BpmI	CTGGAG	3 cut(s)	349, 1095, 1808
Bpu10I	CCTNAGC	3 cut(s)	1275, 1349, 1806
Bpu1102I	GCTNAGC	1 cut(s)	1119
BpuEI	CTTGAG	2 cut(s)	717, 1424
BpuMI	CCSGG	1 cut(s)	279
BsaBI	GATNNNNATC	1 cut(s)	1194
BsaI	GGTCTC	1 cut(s)	917
BsaJI	CCNNGG	7 cut(s)	61, 184, 278, 431, 707, 898, 1248
BsaWI	WCCGGW	2 cut(s)	906, 1342
Bsc4I	CCNNNNNNNGG	5 cut(s)	277, 713, 1076, 1223, 1309
Bse1I	ACTGG	2 cut(s)	349, 1683
Bse3DI	GCAATG	1 cut(s)	969
Bse8I	GATNNNNATC	1 cut(s)	1194
BseAI	TCCGGA	1 cut(s)	1342
BseBI	CCWGG	5 cut(s)	432, 900, 1065, 1074, 1362
BseDI	CCNNGG	7 cut(s)	61, 184, 278, 431, 707, 898, 1248
BseGI	GGATG	2 cut(s)	903, 1528
BseJI	GATNNNNATC	1 cut(s)	1194
BseLI	CCNNNNNNNGG	5 cut(s)	277, 713, 1076, 1223, 1309
BseMI	GCAATG	1 cut(s)	969
BseMII	CTCAG	7 cut(s)	831, 941, 1133, 1266, 1576, 1820, 1827
BseNI	ACTGG	2 cut(s)	349, 1683
BseXI	GCAGC	6 cut(s)	235, 289, 363, 754, 1267, 1400
BseYI	CCCAGC	1 cut(s)	1123
BsgI	GTGCAG	1 cut(s)	497
Bsh1236I	CGCG	1 cut(s)	1397
BshFI	GGCC	1 cut(s)	126
BsiHKAI	GWGCWC	1 cut(s)	1807
BsiSI	CCGG	4 cut(s)	278, 907, 1343, 1748
BslFI	GGGAC	2 cut(s)	107, 895
BslI	CCNNNNNNNGG	5 cut(s)	277, 713, 1076, 1223, 1309
BsmAI	GTCTC	6 cut(s)	90, 323, 917, 1241, 1331, 1706
BsmBI	CGTCTC	3 cut(s)	90, 1241, 1706
BsmFI	GGGAC	2 cut(s)	107, 895
BsnI	GGCC	1 cut(s)	126
Bso31I	GGTCTC	1 cut(s)	917
Bsp1286I	GDGCHC	1 cut(s)	1807
Bsp13I	TCCGGA	1 cut(s)	1342
Bsp143I	GATC	9 cut(s)	12, 334, 360, 424, 556, 598, 640, 1312, 1744
Bsp1720I	GCTNAGC	1 cut(s)	1119
BspACI	CCGC	3 cut(s)	260, 455, 1292
BspANI	GGCC	1 cut(s)	126
BspCNI	CTCAG	7 cut(s)	832, 942, 1132, 1267, 1575, 1819, 1828
BspEI	TCCGGA	1 cut(s)	1342
BspFNI	CGCG	1 cut(s)	1397
BspHI	TCATGA	1 cut(s)	1297
BspLI	GGNNCC	3 cut(s)	600, 911, 1746
BspMAI	CTGCAG	1 cut(s)	1285
BspMI	ACCTGC	1 cut(s)	553
BspPI	GGATC	5 cut(s)	593, 606, 1320, 1739, 1752
BspTNI	GGTCTC	1 cut(s)	917
BsrDI	GCAATG	1 cut(s)	969
BsrI	ACTGG	2 cut(s)	349, 1683
BssECI	CCNNGG	7 cut(s)	61, 184, 278, 431, 707, 898, 1248
BssMI	GATC	9 cut(s)	12, 334, 360, 424, 556, 598, 640, 1312, 1744
BssSI	CACGAG	1 cut(s)	588
BssT1I	CCWWGG	1 cut(s)	707
Bst2BI	CACGAG	1 cut(s)	588
Bst2UI	CCWGG	5 cut(s)	432, 900, 1065, 1074, 1362
Bst4CI	ACNGT	8 cut(s)	524, 880, 1232, 1330, 1443, 1474, 1536, 1685
BstAPI	GCANNNNNTGC	1 cut(s)	1289
BstC8I	GCNNGC	3 cut(s)	43, 1058, 1393
BstDSI	CCRYGG	2 cut(s)	61, 184
BstEII	GGTNACC	1 cut(s)	56
BstENI	CCTNNNNNAGG	2 cut(s)	1074, 1307
BstF5I	GGATG	2 cut(s)	903, 1528
BstFNI	CGCG	1 cut(s)	1397
BstHHI	GCGC	1 cut(s)	1397
BstKTI	GATC	9 cut(s)	15, 337, 363, 427, 559, 601, 643, 1315, 1747
BstMAI	GTCTC	6 cut(s)	90, 323, 917, 1241, 1331, 1706
BstMBI	GATC	9 cut(s)	12, 334, 360, 424, 556, 598, 640, 1312, 1744
BstMWI	GCNNNNNNNGC	5 cut(s)	47, 865, 1280, 1289, 1394
BstNI	CCWGG	5 cut(s)	432, 900, 1065, 1074, 1362
BstPI	GGTNACC	1 cut(s)	56
BstSCI	CCNGG	6 cut(s)	277, 430, 898, 1063, 1072, 1360
BstSFI	CTRYAG	2 cut(s)	1281, 1439
BstUI	CGCG	1 cut(s)	1397
BstV1I	GCAGC	6 cut(s)	235, 289, 363, 754, 1267, 1400
BstV2I	GAAGAC	1 cut(s)	135
BstX2I	RGATCY	4 cut(s)	556, 598, 1312, 1744
BstXI	CCANNNNNNTGG	1 cut(s)	1190
BstYI	RGATCY	4 cut(s)	556, 598, 1312, 1744
BsuI	GTATCC	2 cut(s)	1220, 1368
BsuRI	GGCC	1 cut(s)	126
BtgI	CCRYGG	2 cut(s)	61, 184
BtgZI	GCGATG	2 cut(s)	94, 1107
BtsCI	GGATG	2 cut(s)	903, 1528
BtsI	GCAGTG	1 cut(s)	256
BtsIMutI	CAGTG	2 cut(s)	256, 1532
BveI	ACCTGC	1 cut(s)	553
Cac8I	GCNNGC	3 cut(s)	43, 1058, 1393
CciI	TCATGA	1 cut(s)	1297
CfoI	GCGC	1 cut(s)	1397
Cfr13I	GGNCC	4 cut(s)	909, 1067, 1268, 1681
CseI	GACGC	2 cut(s)	1049, 1386
Csp6I	GTAC	2 cut(s)	657, 1767
CviAII	CATG	4 cut(s)	760, 1006, 1298, 1708
CviQI	GTAC	2 cut(s)	657, 1767
DpnI	GATC	9 cut(s)	14, 336, 362, 426, 558, 600, 642, 1314, 1746
DpnII	GATC	9 cut(s)	12, 334, 360, 424, 556, 598, 640, 1312, 1744
EaeI	YGGCCR	1 cut(s)	124
Eco130I	CCWWGG	1 cut(s)	707
Eco31I	GGTCTC	1 cut(s)	917
Eco47I	GGWCC	4 cut(s)	909, 1067, 1268, 1681
Eco57I	CTGAAG	1 cut(s)	1328
Eco91I	GGTNACC	1 cut(s)	56
EcoNI	CCTNNNNNAGG	2 cut(s)	1074, 1307
EcoO109I	RGGNCCY	1 cut(s)	1268
EcoO65I	GGTNACC	1 cut(s)	56
EcoRII	CCWGG	5 cut(s)	430, 898, 1063, 1072, 1360
EcoT14I	CCWWGG	1 cut(s)	707
ErhI	CCWWGG	1 cut(s)	707
Esp3I	CGTCTC	3 cut(s)	90, 1241, 1706
FaeI	CATG	4 cut(s)	763, 1009, 1301, 1711
FalI	AAGNNNNNCTT	4 cut(s)	161, 193, 1032, 1064
FaqI	GGGAC	2 cut(s)	107, 895
FatI	CATG	4 cut(s)	759, 1005, 1297, 1707
FauI	CCCGC	1 cut(s)	448
Fnu4HI	GCNGC	6 cut(s)	224, 303, 352, 768, 1281, 1389
FokI	GGATG	2 cut(s)	890, 1515
Fsp4HI	GCNGC	6 cut(s)	224, 303, 352, 768, 1281, 1389
FspBI	CTAG	2 cut(s)	20, 848
GlaI	GCGC	1 cut(s)	1396
GluI	GCNGC	6 cut(s)	224, 303, 352, 768, 1281, 1389
GsaI	CCCAGC	1 cut(s)	1127
GsuI	CTGGAG	3 cut(s)	349, 1095, 1808
HaeIII	GGCC	1 cut(s)	126
HapII	CCGG	4 cut(s)	278, 907, 1343, 1748
HgaI	GACGC	2 cut(s)	1049, 1386
HhaI	GCGC	1 cut(s)	1397
Hin1II	CATG	4 cut(s)	763, 1009, 1301, 1711
Hin6I	GCGC	1 cut(s)	1395
HinP1I	GCGC	1 cut(s)	1395
HincII	GTYRAC	4 cut(s)	25, 757, 1490, 1507
HindII	GTYRAC	4 cut(s)	25, 757, 1490, 1507
HinfI	GANTC	7 cut(s)	7, 624, 724, 952, 1244, 1339, 1553
HpaII	CCGG	4 cut(s)	278, 907, 1343, 1748
HphI	GGTGA	5 cut(s)	68, 534, 733, 1091, 1684
Hpy166II	GTNNAC	6 cut(s)	25, 757, 1321, 1490, 1507, 1616
Hpy188I	TCNGA	8 cut(s)	12, 571, 623, 841, 1308, 1540, 1658, 1837
Hpy8I	GTNNAC	6 cut(s)	25, 757, 1321, 1490, 1507, 1616
Hpy99I	CGWCG	4 cut(s)	119, 122, 210, 1236
HpyAV	CCTTC	5 cut(s)	163, 284, 674, 1303, 1313
HpyCH4III	ACNGT	8 cut(s)	524, 880, 1232, 1330, 1443, 1474, 1536, 1685
HpyCH4IV	ACGT	2 cut(s)	244, 784
HpyF10VI	GCNNNNNNNGC	5 cut(s)	47, 865, 1280, 1289, 1394
HpySE526I	ACGT	2 cut(s)	244, 784
Hsp92II	CATG	4 cut(s)	763, 1009, 1301, 1711
HspAI	GCGC	1 cut(s)	1395
Kpn2I	TCCGGA	1 cut(s)	1342
Kzo9I	GATC	9 cut(s)	12, 334, 360, 424, 556, 598, 640, 1312, 1744
LmnI	GCTCC	4 cut(s)	105, 506, 1219, 1345
Lsp1109I	GCAGC	6 cut(s)	235, 289, 363, 754, 1267, 1400
LweI	GCATC	4 cut(s)	562, 652, 912, 1810
MaeI	CTAG	2 cut(s)	20, 848
MaeII	ACGT	2 cut(s)	244, 784
MaeIII	GTNAC	6 cut(s)	56, 199, 1146, 1378, 1398, 1703
MalI	GATC	9 cut(s)	14, 336, 362, 426, 558, 600, 642, 1314, 1746
MboI	GATC	9 cut(s)	12, 334, 360, 424, 556, 598, 640, 1312, 1744
MboII	GAAGA	3 cut(s)	135, 419, 1681
MflI	RGATCY	4 cut(s)	556, 598, 1312, 1744
MhlI	GDGCHC	1 cut(s)	1807
MlsI	TGGCCA	1 cut(s)	126
MluNI	TGGCCA	1 cut(s)	126
MlyI	GAGTC	4 cut(s)	633, 961, 1333, 1547
MmeI	TCCRAC	1 cut(s)	626
Mox20I	TGGCCA	1 cut(s)	126
MroI	TCCGGA	1 cut(s)	1342
MroXI	GAANNNNTTC	3 cut(s)	173, 287, 835
MscI	TGGCCA	1 cut(s)	126
MseI	TTAA	5 cut(s)	579, 744, 885, 918, 1368
MslI	CAYNNNNRTG	1 cut(s)	1050
Msp20I	TGGCCA	1 cut(s)	126
MspA1I	CMGCKG	1 cut(s)	1123
MspI	CCGG	4 cut(s)	278, 907, 1343, 1748
MspR9I	CCNGG	6 cut(s)	279, 432, 900, 1065, 1074, 1362
MvaI	CCWGG	5 cut(s)	432, 900, 1065, 1074, 1362
MvnI	CGCG	1 cut(s)	1397
MwoI	GCNNNNNNNGC	5 cut(s)	47, 865, 1280, 1289, 1394
NciI	CCSGG	1 cut(s)	279
NdeII	GATC	9 cut(s)	12, 334, 360, 424, 556, 598, 640, 1312, 1744
NlaIII	CATG	4 cut(s)	763, 1009, 1301, 1711
NlaIV	GGNNCC	3 cut(s)	600, 911, 1746
NmeAIII	GCCGAG	2 cut(s)	751, 1566
NmuCI	GTSAC	3 cut(s)	56, 1146, 1398
PagI	TCATGA	1 cut(s)	1297
PaqCI	CACCTGC	1 cut(s)	553
PcsI	WCGNNNNNNNCGW	1 cut(s)	1492
PdmI	GAANNNNTTC	3 cut(s)	173, 287, 835
PfeI	GAWTC	3 cut(s)	7, 724, 1244
PfoI	TCCNGGA	1 cut(s)	1072
PkrI	GCNGC	6 cut(s)	225, 304, 353, 769, 1282, 1390
PleI	GAGTC	4 cut(s)	632, 960, 1333, 1547
PpsI	GAGTC	4 cut(s)	632, 960, 1333, 1547
PpuMI	RGGWCCY	1 cut(s)	1268
Psp5II	RGGWCCY	1 cut(s)	1268
Psp6I	CCWGG	5 cut(s)	430, 898, 1063, 1072, 1360
PspEI	GGTNACC	1 cut(s)	56
PspFI	CCCAGC	1 cut(s)	1123
PspGI	CCWGG	5 cut(s)	430, 898, 1063, 1072, 1360
PspN4I	GGNNCC	3 cut(s)	600, 911, 1746
PspPI	GGNCC	4 cut(s)	909, 1067, 1268, 1681
PspPPI	RGGWCCY	1 cut(s)	1268
PstI	CTGCAG	1 cut(s)	1285
PsuI	RGATCY	4 cut(s)	556, 598, 1312, 1744
PvuII	CAGCTG	1 cut(s)	1123
RsaI	GTAC	2 cut(s)	658, 1768
RsaNI	GTAC	2 cut(s)	657, 1767
RseI	CAYNNNNRTG	1 cut(s)	1050
SaqAI	TTAA	5 cut(s)	579, 744, 885, 918, 1368
SatI	GCNGC	6 cut(s)	224, 303, 352, 768, 1281, 1389
Sau3AI	GATC	9 cut(s)	12, 334, 360, 424, 556, 598, 640, 1312, 1744
Sau96I	GGNCC	4 cut(s)	909, 1067, 1268, 1681
SchI	GAGTC	4 cut(s)	633, 961, 1333, 1547
ScrFI	CCNGG	6 cut(s)	279, 432, 900, 1065, 1074, 1362
SduI	GDGCHC	1 cut(s)	1807
SfaNI	GCATC	4 cut(s)	562, 652, 912, 1810
SfcI	CTRYAG	2 cut(s)	1281, 1439
SinI	GGWCC	4 cut(s)	909, 1067, 1268, 1681
SmiMI	CAYNNNNRTG	1 cut(s)	1050
SmlI	CTYRAG	2 cut(s)	732, 1403
SmoI	CTYRAG	2 cut(s)	732, 1403
SsiI	CCGC	3 cut(s)	260, 455, 1292
SspI	AATATT	2 cut(s)	675, 791
SspMI	CTAG	2 cut(s)	20, 848
StyD4I	CCNGG	6 cut(s)	277, 430, 898, 1063, 1072, 1360
StyI	CCWWGG	1 cut(s)	707
TaaI	ACNGT	8 cut(s)	524, 880, 1232, 1330, 1443, 1474, 1536, 1685
TaiI	ACGT	2 cut(s)	247, 787
TaqI	TCGA	1 cut(s)	1567
TfiI	GAWTC	3 cut(s)	7, 724, 1244
Tru1I	TTAA	5 cut(s)	579, 744, 885, 918, 1368
Tru9I	TTAA	5 cut(s)	579, 744, 885, 918, 1368
TscAI	CASTG	2 cut(s)	256, 1539
TseFI	GTSAC	3 cut(s)	56, 1146, 1398
TseI	GCWGC	6 cut(s)	223, 302, 351, 767, 1280, 1388
Tsp45I	GTSAC	3 cut(s)	56, 1146, 1398
TspDTI	ATGAA	6 cut(s)	218, 280, 368, 786, 1044, 1286
TspRI	CASTG	2 cut(s)	256, 1539
VpaK11BI	GGWCC	4 cut(s)	909, 1067, 1268, 1681
XagI	CCTNNNNNAGG	2 cut(s)	1074, 1307
XapI	RAATTY	1 cut(s)	701
XmnI	GAANNNNTTC	3 cut(s)	173, 287, 835
XspI	CTAG	2 cut(s)	20, 848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.