Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0010049

Physical Location & Seq

Genomic Coordinates Reverse (-)

27869981 .. 27876687

Gene Structure 6707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G023270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGGTCGGAAGCTCAAAGACCCCACAACTCTCAGCGACCCAGAAGCCCAGGAAGCCACGAACCTCCGCGAAGCCAAAGCCGAGAAGAAGAAAAAGAAGCACAAAAACAAACACAGAGACGAAGAAGAAGAAGAAGATGACCAACTCAGTCCTCCTAAGCGAAAGTTGGAGGAAGAAAATTCAGAATCTAAAAAGAAGAAGAAGAAGCACAAGAAATCGAAAGAGAGCGTAAACAATGAGGAGGAGCCGAAGGGAAATGGAGAAGTGGAAGAGAGTAATTCCACGGATGCGGTTGTGATGGTTACTGGGAAAGATGCTAATGAAGCCAAATATAAGCCGTTGGATTCGTTCGCGGAGTCGAAGCTTCCCAGTGAGGTCTTACAGTGCTGTGTGAATTTCCAGAAACCGTCTCCGATTCAGTCCCGGGCGTGGCCTTTCTTGTTGGACGGTCGTGATTTTATTGGAATTGCGAAAACTGGGTCAGGTAAGACTTTGGCGTTTGGGATACCAGCTATTAATCAGGTATTGAATAAGAGGAATGGTAAGTTTTCGAGGGGGAGATATCCTCTTTGTCTTGTGCTCGCACCTACAAGGGAGCTAGCTCAACAAATTTCAGATGTACTGGTTGAGGCGGGGAAACCTTGTGGTGTGGAATCAGTTTGTTTGTATGGAGGAACATCTAAAGGACCTCAAATATCTTCTCTGAAATCTGGTGTGGACATCGTTATTGGAACACCTGGTCGTTTGAAGGATCTCATTGAAATGGGTTTGTGTTGCCTTAAGGAAGTATCTTTTGCGGTCCTTGATGAAGCAGATAGAATGCTTGACATGGGATTTGAACCTGAAGTCCGCTATATACTAGGACAGACATGCTCGGCTCGCCAAATGGTAATGTTCAGTGCGACATGGCCTCCATCAGTTCATCAGTTAGCTCAGGAATTCATGGATCCTAATCCAGTTAAGGTGGTTGTTGGTTCAGAGGATTTAGCTGCCAACCATGATGTCCTGCAGATAGTCGAGGTCTTGGATGACCGGTCACGCGATGGGCGTTTGGTTGCTTTGCTAGAAAAATACCACAAATCCAAAGGAAACAGAGTTTTGGTGTTTGTCTTGTACAAAATGGAAGCTACTCGTGTTGAAAATATGCTGCAAAGAGGGGGTTGGAAGGTCTGTTCTATACATGGTGATAAAGCACAAAATCAGCGCACACAGGCACTATCTCTATTTAAGCAAGGAAGCTGTCCCTTGATGATTGCTACTGATGTGGCTGCTCGAGGATTAGATATCCCAGATGTTGAGGTAGTGATTAACTATAGTTTTCCACTCACTACCGAGGATTATGTCCACAGAATTGGGCGCACTGGACGGGCCGGTAAAAAGGGTGTCGCTCATACCTTTTTCACGCATCACAACAAGGGACTTGCTGGGGAGCTGGTCAATGTTCTCAGAGAAGCTGGGCAAAATGTGCCAGCTGACTTGTTAAATTTTGGCACTCATGTAAAGAAAAAGGAATCCAAACTTTATGGGGCTCACTTCAGAGAAATTTCTGCCGATGCTCCAAAGGCTAAAAAGATCACATTTGCTGACTCTGATGATGAAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

534

Amino Acids

59.17

Weight (kDa)

8.33

Isoelectric Point (pI)

34.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	137 - 309	4.6e-47	DEAD/DEAH box helicase
Helicase_C	PF00271	354 - 458	2.1e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31970
fragaria_vesca	FvH4_5g23490
malus_domestica	MD00G1068700.v1.1 MD06G1023800.v1.1
prunus_persica	Prupe.5G024900_v2.0.a1
pyrus_communis	pycom16g25290
rosa_chinensis	RchiOBHm_Chr7g0212761
rosa_laevigata	RLG00000002870
rosa_multiflora	Rmu_sc0000394.1_g000033 Rmu_sc0008336.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246570 Rroxscaffold_3G00250790 Rroxscaffold_4G00321740 Rroxscaffold_4G00321750
rosa_rugosa	Rorug07G0136500
rosa_samantha	Rh7BG263500 Rh7CG287100
rosa_wichuraiana	Rw7G023130 Rw7G023160 Rw7G023230 Rw7G023270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	69, 353, 1041
AciI	CCGC	6 cut(s)	67, 290, 353, 632, 797, 850
AclWI	GGATC	3 cut(s)	759, 941, 954
AcsI	RAATTY	6 cut(s)	178, 394, 609, 938, 1483, 1542
AcuI	CTGAAG	2 cut(s)	864, 1519
AfaI	GTAC	2 cut(s)	621, 1115
AfiI	CCNNNNNNNGG	1 cut(s)	429
AflII	CTTAAG	1 cut(s)	779
AgeI	ACCGGT	1 cut(s)	1032
AgsI	TTSAA	5 cut(s)	529, 748, 761, 839, 1139
AjnI	CCWGG	2 cut(s)	48, 736
AloI	GAACNNNNNNTCC	4 cut(s)	831, 863, 1156, 1188
Alw21I	GWGCWC	1 cut(s)	582
Alw26I	GTCTC	2 cut(s)	111, 414
AlwI	GGATC	3 cut(s)	759, 941, 954
Ama87I	CYCGRG	2 cut(s)	423, 1272
AoxI	GGCC	3 cut(s)	431, 908, 1368
ApeKI	GCWGC	3 cut(s)	989, 1147, 1268
ApoI	RAATTY	6 cut(s)	178, 394, 609, 938, 1483, 1542
ArsI	GACNNNNNNTTYG	4 cut(s)	464, 496, 818, 850
AseI	ATTAAT	1 cut(s)	516
AsiGI	ACCGGT	1 cut(s)	1032
AspLEI	GCGC	2 cut(s)	1206, 1359
AspS9I	GGNCC	3 cut(s)	686, 799, 1368
AsuC2I	CCSGG	2 cut(s)	424, 425
AsuHPI	GGTGA	1 cut(s)	1196
AsuNHI	GCTAGC	1 cut(s)	598
AvaI	CYCGRG	2 cut(s)	423, 1272
AvaII	GGWCC	2 cut(s)	686, 799
BamHI	GGATCC	1 cut(s)	946
BanII	GRGCYC	1 cut(s)	1531
BauI	CACGAG	1 cut(s)	1131
Bbv12I	GWGCWC	1 cut(s)	582
BbvI	GCAGC	3 cut(s)	976, 1134, 1255
BccI	CCATC	3 cut(s)	292, 922, 1037
BceAI	ACGGC	1 cut(s)	322
BciT130I	CCWGG	2 cut(s)	50, 738
BciVI	GTATCC	1 cut(s)	498
BcnI	CCSGG	2 cut(s)	424, 425
BcoDI	GTCTC	2 cut(s)	111, 414
BfaI	CTAG	3 cut(s)	599, 860, 1064
BfmI	CTRYAG	2 cut(s)	1007, 1312
BfrI	CTTAAG	1 cut(s)	779
BfuI	GTATCC	1 cut(s)	498
BisI	GCNGC	3 cut(s)	990, 1148, 1269
BlsI	GCNGC	3 cut(s)	991, 1149, 1270
Bme1390I	CCNGG	4 cut(s)	50, 424, 425, 738
Bme18I	GGWCC	2 cut(s)	686, 799
BmeT110I	CYCGRG	2 cut(s)	423, 1272
BmgT120I	GGNCC	3 cut(s)	686, 799, 1368
BmiI	GGNNCC	2 cut(s)	246, 948
BmrFI	CCNGG	4 cut(s)	50, 424, 425, 738
BmrI	ACTGGG	3 cut(s)	315, 363, 486
BmsI	GCATC	4 cut(s)	277, 304, 1414, 1543
BmtI	GCTAGC	1 cut(s)	602
BmuI	ACTGGG	3 cut(s)	315, 363, 486
BplI	GAGNNNNNCTC	2 cut(s)	550, 582
Bpu10I	CCTNAGC	2 cut(s)	156, 933
BpuMI	CCSGG	2 cut(s)	424, 425
BsaBI	GATNNNNATC	1 cut(s)	951
BsaJI	CCNNGG	4 cut(s)	48, 282, 423, 1332
BsaWI	WCCGGW	1 cut(s)	1032
BsaXI	ACNNNNNCTCC	2 cut(s)	895, 925
Bsc4I	CCNNNNNNNGG	1 cut(s)	429
Bse118I	RCCGGY	2 cut(s)	1032, 1370
Bse1I	ACTGG	6 cut(s)	310, 369, 481, 627, 956, 1366
Bse8I	GATNNNNATC	1 cut(s)	951
BseBI	CCWGG	2 cut(s)	50, 738
BseDI	CCNNGG	4 cut(s)	48, 282, 423, 1332
BseGI	GGATG	2 cut(s)	292, 1033
BseJI	GATNNNNATC	1 cut(s)	951
BseLI	CCNNNNNNNGG	1 cut(s)	429
BseMII	CTCAG	4 cut(s)	46, 160, 947, 1459
BseNI	ACTGG	6 cut(s)	310, 369, 481, 627, 956, 1366
BseRI	GAGGAG	2 cut(s)	254, 257
BseXI	GCAGC	3 cut(s)	976, 1134, 1255
BseYI	CCCAGC	2 cut(s)	1424, 1454
Bsh1236I	CGCG	3 cut(s)	69, 353, 1041
Bsh1285I	CGRYCG	1 cut(s)	451
BshFI	GGCC	3 cut(s)	433, 910, 1370
BshTI	ACCGGT	1 cut(s)	1032
BsiEI	CGRYCG	1 cut(s)	451
BsiHKAI	GWGCWC	1 cut(s)	582
BsiHKCI	CYCGRG	2 cut(s)	423, 1272
BsiSI	CCGG	3 cut(s)	424, 1033, 1371
BslFI	GGGAC	3 cut(s)	406, 1227, 1431
BslI	CCNNNNNNNGG	1 cut(s)	429
BsmAI	GTCTC	2 cut(s)	111, 414
BsmBI	CGTCTC	2 cut(s)	111, 414
BsmFI	GGGAC	3 cut(s)	406, 1227, 1431
BsmI	GAATGC	1 cut(s)	825
BsnI	GGCC	3 cut(s)	433, 910, 1370
BsoBI	CYCGRG	2 cut(s)	423, 1272
Bsp1286I	GDGCHC	2 cut(s)	582, 1531
Bsp1407I	TGTACA	1 cut(s)	1113
Bsp143I	GATC	3 cut(s)	751, 946, 1572
BspACI	CCGC	6 cut(s)	67, 290, 353, 632, 797, 850
BspANI	GGCC	3 cut(s)	433, 910, 1370
BspCNI	CTCAG	4 cut(s)	45, 159, 946, 1458
BspFNI	CGCG	3 cut(s)	69, 353, 1041
BspLI	GGNNCC	2 cut(s)	246, 948
BspMAI	CTGCAG	1 cut(s)	1011
BspOI	GCTAGC	1 cut(s)	602
BspPI	GGATC	3 cut(s)	759, 941, 954
BspTI	CTTAAG	1 cut(s)	779
BsrFI	RCCGGY	2 cut(s)	1032, 1370
BsrGI	TGTACA	1 cut(s)	1113
BsrI	ACTGG	6 cut(s)	310, 369, 481, 627, 956, 1366
BssAI	RCCGGY	2 cut(s)	1032, 1370
BssECI	CCNNGG	4 cut(s)	48, 282, 423, 1332
BssMI	GATC	3 cut(s)	751, 946, 1572
BssSI	CACGAG	1 cut(s)	1131
Bst2BI	CACGAG	1 cut(s)	1131
Bst2UI	CCWGG	2 cut(s)	50, 738
Bst4CI	ACNGT	3 cut(s)	384, 408, 449
Bst6I	CTCTTC	1 cut(s)	264
BstAFI	CTTAAG	1 cut(s)	779
BstAPI	GCANNNNNTGC	1 cut(s)	1465
BstAUI	TGTACA	1 cut(s)	1113
BstC8I	GCNNGC	4 cut(s)	582, 600, 880, 1470
BstDEI	CTNAG	5 cut(s)	32, 146, 156, 933, 1445
BstDSI	CCRYGG	1 cut(s)	282
BstF5I	GGATG	2 cut(s)	292, 1033
BstFNI	CGCG	3 cut(s)	69, 353, 1041
BstHHI	GCGC	2 cut(s)	1206, 1359
BstKTI	GATC	3 cut(s)	754, 949, 1575
BstMAI	GTCTC	2 cut(s)	111, 414
BstMBI	GATC	3 cut(s)	751, 946, 1572
BstMCI	CGRYCG	1 cut(s)	451
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 323, 879, 1465, 1562
BstNI	CCWGG	2 cut(s)	50, 738
BstNSI	RCATGY	1 cut(s)	873
BstSCI	CCNGG	4 cut(s)	48, 422, 423, 736
BstSFI	CTRYAG	2 cut(s)	1007, 1312
BstUI	CGCG	3 cut(s)	69, 353, 1041
BstV1I	GCAGC	3 cut(s)	976, 1134, 1255
BstX2I	RGATCY	2 cut(s)	751, 946
BstXI	CCANNNNNNTGG	1 cut(s)	1352
BstYI	RGATCY	2 cut(s)	751, 946
BsuI	GTATCC	1 cut(s)	498
BsuRI	GGCC	3 cut(s)	433, 910, 1370
BtgI	CCRYGG	1 cut(s)	282
BtgZI	GCGATG	1 cut(s)	1056
BtsCI	GGATG	2 cut(s)	292, 1033
BtsIMutI	CAGTG	4 cut(s)	376, 389, 904, 1359
Cac8I	GCNNGC	4 cut(s)	582, 600, 880, 1470
CfoI	GCGC	2 cut(s)	1206, 1359
Cfr10I	RCCGGY	2 cut(s)	1032, 1370
Cfr13I	GGNCC	3 cut(s)	686, 799, 1368
Cfr9I	CCCGGG	1 cut(s)	423
CsiI	ACCWGGT	1 cut(s)	736
Csp6I	GTAC	2 cut(s)	620, 1114
CspAI	ACCGGT	1 cut(s)	1032
CviAII	CATG	7 cut(s)	829, 870, 906, 943, 998, 1181, 1496
CviQI	GTAC	2 cut(s)	620, 1114
DdeI	CTNAG	5 cut(s)	32, 146, 156, 933, 1445
DpnI	GATC	3 cut(s)	753, 948, 1574
DpnII	GATC	3 cut(s)	751, 946, 1572
Eam1104I	CTCTTC	1 cut(s)	264
EarI	CTCTTC	1 cut(s)	264
Eco24I	GRGCYC	1 cut(s)	1531
Eco32I	GATATC	2 cut(s)	563, 1285
Eco47I	GGWCC	2 cut(s)	686, 799
Eco57I	CTGAAG	2 cut(s)	864, 1519
Eco88I	CYCGRG	2 cut(s)	423, 1272
EcoO109I	RGGNCCY	1 cut(s)	686
EcoRI	GAATTC	1 cut(s)	938
EcoRII	CCWGG	2 cut(s)	48, 736
EcoRV	GATATC	2 cut(s)	563, 1285
EcoT38I	GRGCYC	1 cut(s)	1531
Esp3I	CGTCTC	2 cut(s)	111, 414
FaeI	CATG	7 cut(s)	832, 873, 909, 946, 1001, 1184, 1499
FaqI	GGGAC	3 cut(s)	406, 1227, 1431
FatI	CATG	7 cut(s)	828, 869, 905, 942, 997, 1180, 1495
FauI	CCCGC	1 cut(s)	625
Fnu4HI	GCNGC	3 cut(s)	990, 1148, 1269
FokI	GGATG	2 cut(s)	299, 1040
FriOI	GRGCYC	1 cut(s)	1531
Fsp4HI	GCNGC	3 cut(s)	990, 1148, 1269
FspBI	CTAG	3 cut(s)	599, 860, 1064
GlaI	GCGC	2 cut(s)	1205, 1358
GluI	GCNGC	3 cut(s)	990, 1148, 1269
GsaI	CCCAGC	2 cut(s)	1428, 1458
HaeIII	GGCC	3 cut(s)	433, 910, 1370
HapII	CCGG	3 cut(s)	424, 1033, 1371
HhaI	GCGC	2 cut(s)	1206, 1359
Hin1II	CATG	7 cut(s)	832, 873, 909, 946, 1001, 1184, 1499
Hin6I	GCGC	2 cut(s)	1204, 1357
HinP1I	GCGC	2 cut(s)	1204, 1357
HindIII	AAGCTT	1 cut(s)	362
HinfI	GANTC	7 cut(s)	185, 344, 356, 415, 653, 1511, 1586
HpaII	CCGG	3 cut(s)	424, 1033, 1371
HphI	GGTGA	1 cut(s)	1196
Hpy166II	GTNNAC	3 cut(s)	232, 718, 1345
Hpy188I	TCNGA	9 cut(s)	9, 184, 414, 616, 705, 979, 1448, 1538, 1591
Hpy188III	TCNNGA	3 cut(s)	400, 452, 935
Hpy8I	GTNNAC	3 cut(s)	232, 718, 1345
HpyAV	CCTTC	3 cut(s)	244, 742, 1159
HpyCH4III	ACNGT	3 cut(s)	384, 408, 449
HpyCH4V	TGCA	2 cut(s)	1009, 1150
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 323, 879, 1465, 1562
HpyF3I	CTNAG	5 cut(s)	32, 146, 156, 933, 1445
Hsp92II	CATG	7 cut(s)	832, 873, 909, 946, 1001, 1184, 1499
HspAI	GCGC	2 cut(s)	1204, 1357
Kzo9I	GATC	3 cut(s)	751, 946, 1572
LmnI	GCTCC	4 cut(s)	244, 595, 1429, 1561
Lsp1109I	GCAGC	3 cut(s)	976, 1134, 1255
LweI	GCATC	4 cut(s)	277, 304, 1414, 1543
MabI	ACCWGGT	1 cut(s)	736
MaeI	CTAG	3 cut(s)	599, 860, 1064
MaeIII	GTNAC	2 cut(s)	301, 1035
MalI	GATC	3 cut(s)	753, 948, 1574
MboI	GATC	3 cut(s)	751, 946, 1572
MflI	RGATCY	2 cut(s)	751, 946
MhlI	GDGCHC	2 cut(s)	582, 1531
MluCI	AATT	9 cut(s)	178, 277, 394, 465, 609, 938, 1350, 1483, 1542
MlyI	GAGTC	2 cut(s)	365, 1580
MmeI	TCCRAC	4 cut(s)	147, 321, 423, 1142
MseI	TTAA	6 cut(s)	516, 780, 960, 1227, 1308, 1481
MslI	CAYNNNNRTG	1 cut(s)	761
MspA1I	CMGCKG	1 cut(s)	1472
MspCI	CTTAAG	1 cut(s)	779
MspI	CCGG	3 cut(s)	424, 1033, 1371
MspR9I	CCNGG	4 cut(s)	50, 424, 425, 738
Mva1269I	GAATGC	1 cut(s)	825
MvaI	CCWGG	2 cut(s)	50, 738
MvnI	CGCG	3 cut(s)	69, 353, 1041
MwoI	GCNNNNNNNGC	5 cut(s)	53, 323, 879, 1465, 1562
NciI	CCSGG	2 cut(s)	424, 425
NdeII	GATC	3 cut(s)	751, 946, 1572
NheI	GCTAGC	1 cut(s)	598
NlaIII	CATG	7 cut(s)	832, 873, 909, 946, 1001, 1184, 1499
NlaIV	GGNNCC	2 cut(s)	246, 948
NmeAIII	GCCGAG	2 cut(s)	106, 854
NmuCI	GTSAC	1 cut(s)	1035
NspI	RCATGY	1 cut(s)	873
PaeR7I	CTCGAG	1 cut(s)	1272
PcsI	WCGNNNNNNNCGW	1 cut(s)	1045
PctI	GAATGC	1 cut(s)	825
PfeI	GAWTC	5 cut(s)	185, 344, 415, 653, 1511
PinAI	ACCGGT	1 cut(s)	1032
PkrI	GCNGC	3 cut(s)	991, 1149, 1270
PleI	GAGTC	2 cut(s)	364, 1580
PpsI	GAGTC	2 cut(s)	364, 1580
PpuMI	RGGWCCY	1 cut(s)	686
PshBI	ATTAAT	1 cut(s)	516
Psp5II	RGGWCCY	1 cut(s)	686
Psp6I	CCWGG	2 cut(s)	48, 736
PspFI	CCCAGC	2 cut(s)	1424, 1454
PspGI	CCWGG	2 cut(s)	48, 736
PspN4I	GGNNCC	2 cut(s)	246, 948
PspPI	GGNCC	3 cut(s)	686, 799, 1368
PspPPI	RGGWCCY	1 cut(s)	686
PspXI	VCTCGAGB	1 cut(s)	1272
PstI	CTGCAG	1 cut(s)	1011
PsuI	RGATCY	2 cut(s)	751, 946
PvuII	CAGCTG	1 cut(s)	1472
RsaI	GTAC	2 cut(s)	621, 1115
RsaNI	GTAC	2 cut(s)	620, 1114
RseI	CAYNNNNRTG	1 cut(s)	761
SaqAI	TTAA	6 cut(s)	516, 780, 960, 1227, 1308, 1481
SatI	GCNGC	3 cut(s)	990, 1148, 1269
Sau3AI	GATC	3 cut(s)	751, 946, 1572
Sau96I	GGNCC	3 cut(s)	686, 799, 1368
SchI	GAGTC	2 cut(s)	365, 1580
ScrFI	CCNGG	4 cut(s)	50, 424, 425, 738
SduI	GDGCHC	2 cut(s)	582, 1531
SexAI	ACCWGGT	1 cut(s)	736
SfaNI	GCATC	4 cut(s)	277, 304, 1414, 1543
SfcI	CTRYAG	2 cut(s)	1007, 1312
Sfr274I	CTCGAG	1 cut(s)	1272
SinI	GGWCC	2 cut(s)	686, 799
SlaI	CTCGAG	1 cut(s)	1272
SmaI	CCCGGG	1 cut(s)	425
SmiMI	CAYNNNNRTG	1 cut(s)	761
SmlI	CTYRAG	2 cut(s)	779, 1272
SmoI	CTYRAG	2 cut(s)	779, 1272
Sse9I	AATT	9 cut(s)	178, 277, 394, 465, 609, 938, 1350, 1483, 1542
SsiI	CCGC	6 cut(s)	67, 290, 353, 632, 797, 850
SspMI	CTAG	3 cut(s)	599, 860, 1064
StyD4I	CCNGG	4 cut(s)	48, 422, 423, 736
TaaI	ACNGT	3 cut(s)	384, 408, 449
TaqI	TCGA	5 cut(s)	218, 359, 551, 1017, 1273
TasI	AATT	9 cut(s)	178, 277, 394, 465, 609, 938, 1350, 1483, 1542
TatI	WGTACW	2 cut(s)	619, 1113
TfiI	GAWTC	5 cut(s)	185, 344, 415, 653, 1511
Tru1I	TTAA	6 cut(s)	516, 780, 960, 1227, 1308, 1481
Tru9I	TTAA	6 cut(s)	516, 780, 960, 1227, 1308, 1481
TscAI	CASTG	4 cut(s)	376, 389, 904, 1366
TseFI	GTSAC	1 cut(s)	1035
TseI	GCWGC	3 cut(s)	989, 1147, 1268
Tsp45I	GTSAC	1 cut(s)	1035
TspDTI	ATGAA	4 cut(s)	336, 822, 911, 931
TspGWI	ACGGA	1 cut(s)	299
TspMI	CCCGGG	1 cut(s)	423
TspRI	CASTG	4 cut(s)	376, 389, 904, 1366
Vha464I	CTTAAG	1 cut(s)	779
VpaK11BI	GGWCC	2 cut(s)	686, 799
VspI	ATTAAT	1 cut(s)	516
XapI	RAATTY	6 cut(s)	178, 394, 609, 938, 1483, 1542
XceI	RCATGY	1 cut(s)	873
XhoI	CTCGAG	1 cut(s)	1272
XmaI	CCCGGG	1 cut(s)	423
XspI	CTAG	3 cut(s)	599, 860, 1064

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.