Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0003338

Physical Location & Seq

Genomic Coordinates Reverse (-)

30696906 .. 30705064

Gene Structure 8159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1140200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGACCCCTACCATCCGACCCAAATCTCAACCCAAAACGACAGTCGGGTTTGTTAAGGCGACTGCGTTTAGTCCAAAAGCATCCCACTTTCTGGCACGCCGCTCAATAATTTGGACGACTCACCCTACCACTCAGCTCCCGTTCCATACTTCTCTCCATCAGTCCGAGCTCAACCACCTGCAAATGGCGATGTACATCGTGTCACGGCGGGCAGCCGGCGGATCGACGCCGATGGCGGCGTTGCGCTACGCTACTTCTTTGAGACCGTATTCGACGAAGTTTAGGGAGGAAAGGGACACTTTTGGACCCATCAACGTTCCCTCAGACAAGCTGTGGGGGGCGCAGACTCAGAGATCGCTGCAGAATTTCGATATCGGCGGCGAGCGGGAGCGTATGCCCGAACCCATTGTTCGTGCTTTTGGGGTGCTCAAAAAATGCGCTGCAAAGGTGAACATGGAGTATGGTCTTGATCCAACTATTGGGAAAGCAGTAATGCAAGCGGCCCAAGAAGTCGCGGAGGGGAAGCTCAACGAACACTTTCCACTTGTTATCTGGCAGACTGGCAGTGGAACCCAAAGCAACATGAATGCCAATGAGGTCATTGCGAACAGGGCCGCTGAGATACTTGGCCATCAGCGCGGCGAAAAGTTTGTGCACCCGAATGACCATGTTAATAGATCACAATCTTCTAATGACACTTTCCCAACCGTCATGCACATTGCATCTGCAATGGAAATTAACTCAAGACTGATACCAAATTTGAAAACTTTGCATGCTGCCCTACATTCGAAGTCTGAAGAATTCAAAGATATTGTTAAAATTGGACGCACTCACACACAAGATGCGACGCCTTTAACTCTTGGGCAAGAGTTCAGCGGCTATTCAACACAAGTGAAATATGGAATTGAACGAGTTTTGCTTACTCTACCTAGGATGTATCAGCTTGCACAGGGTGGTACTGCTGTTGGGACTGGATTGAACACAAAGAAGGGATTTGATGTAAAGATAGCTGCAGCAGTAGCTGAGGAAACAAAGTTACCATTTGTCACTGCAGAAAACAAGTTTGAAGCTTTGGCTGCACATGATGCTTTTGTTGAAACTAGCGGAGCCCTGAACACAGTTGCTACTTCTTTGATGAAGATTGCAAATGATATACGTTTACTAGGAAGTGGTCCACGTTGTGGCCTCGGTGAACTCATTCTCCCTGAAAACGAGCCTGGTAGCAGCATAATGCCTGGGAAGGTAAACCCTACCCAGTGTGAGGCTCTCACAATGGTCTGTGCTCAGGTTATGGGTAACAATGTGGCCATTACGGTAGGTGGATCAAATGGTCACTTCGAACTTAATGTGTTCAAGCCAATGATTGCTAGTGGTCTCCTGCATTCGGTGAGATTGCTTGGGGATGCATCTGCTTCCTTTGAAAAGAACTGCGTGAGAGGAATTCAAGCTAATAGGGAAAGAATTTCAAAGTTACTTCATGAGTCACTTATGTTGGTCACGTCCTTGAATCCTAAAATTGGTTATGATAATGCTGCGGCAGTTGCAAAGACAGCCCACAAGGAGGGATCCACTTTGAAGGAAGCTGCATTGAAACTAGGAATGCTATCCAGCGAAGAATTCGATACTCTTGTGGTGCCAGAGAAGATGATTGGCCCAACCGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004333 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0006106 GO:0006108 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009060 GO:0009266 GO:0009409 GO:0009628 GO:0009631 GO:0009651 GO:0009856 GO:0009987 GO:0010109 GO:0015980 GO:0016829 GO:0016835 GO:0016836 GO:0016999 GO:0017144 GO:0019222 GO:0019752 GO:0022414 GO:0031323 GO:0032501 GO:0032502 GO:0042126 GO:0042128 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045333 GO:0048856 GO:0048868 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0055114 GO:0065007 GO:0071704 GO:0071941 GO:0072350 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00020 ko00620 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko04934 ko05200 ko05211 map00020 map00620 map00720 map01100 map01110 map01120 map01130 map01200 map04934 map05200 map05211

Pfam Domains

Protein Families

FumaraseC_C Lyase_1

Protein Analysis

555

Amino Acids

60.16

Weight (kDa)

9.07

Isoelectric Point (pI)

30.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_1	PF00206	102 - 432	3.4e-115	Lyase
FumaraseC_C	PF10415	498 - 550	2.1e-23	Fumarase C C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003338)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47510 AT2G47510 AT2G47510 AT5G50950 AT5G50950 AT5G50950 AT5G50950
fragaria_vesca	FvH4_2g26121 FvH4_2g26121 FvH4_2g26140 FvH4_2g26140
malus_domestica	MD00G1140200.v1.1 MD03G1292300.v1.1
prunus_persica	Prupe.8G265300_v2.0.a1 Prupe.8G265300_v2.0.a1 Prupe.8G265300_v2.0.a1
pyrus_communis	pycom03g23150 pycom11g27280
rosa_chinensis	RchiOBHm_Chr6g0294511 RchiOBHm_Chr6g0294521
rosa_laevigata	RLG00000011863
rosa_multiflora	Rmu_ssc0000248.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173260 Rroxscaffold_7G00173270
rosa_rugosa	Rorug06G0245500 Rorug06G0245500
rosa_samantha	Rh6AG357800 Rh6AG357900 Rh6BG364700 Rh6BG364800 Rh6CG371800 Rh6CG371900 Rh6DG358600 Rh6DG358700
rosa_wichuraiana	Rw6G031210 Rw6G031220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	186
Acc36I	ACCTGC	1 cut(s)	186
AccB1I	GGYRCC	1 cut(s)	1633
AccB7I	CCANNNNNTGG	3 cut(s)	91, 479, 1181
AccBSI	CCGCTC	2 cut(s)	102, 385
AccII	CGCG	2 cut(s)	515, 639
AclI	AACGTT	1 cut(s)	315
AclWI	GGATC	5 cut(s)	229, 464, 1330, 1560, 1573
AcoI	YGGCCR	2 cut(s)	628, 1305
AcsI	RAATTY	6 cut(s)	364, 757, 800, 1440, 1461, 1616
AcuI	CTGAAG	1 cut(s)	816
AcyI	GRCGYC	2 cut(s)	227, 848
AdeI	CACNNNGTG	2 cut(s)	953, 1181
AfaI	GTAC	2 cut(s)	194, 958
AfiI	CCNNNNNNNGG	8 cut(s)	91, 184, 479, 1181, 1261, 1384, 1517, 1561
AjiI	CACGTC	1 cut(s)	1500
AjnI	CCWGG	2 cut(s)	1216, 1234
AloI	GAACNNNNNNTCC	2 cut(s)	1185, 1217
Alw21I	GWGCWC	4 cut(s)	171, 429, 657, 1285
Alw26I	GTCTC	2 cut(s)	256, 1379
Alw44I	GTGCAC	1 cut(s)	653
AlwI	GGATC	5 cut(s)	229, 464, 1330, 1560, 1573
AlwNI	CAGNNNCTG	1 cut(s)	1022
AoxI	GGCC	6 cut(s)	501, 612, 628, 1183, 1305, 1651
ApaLI	GTGCAC	1 cut(s)	653
ApoI	RAATTY	6 cut(s)	364, 757, 800, 1440, 1461, 1616
ArsI	GACNNNNNNTTYG	2 cut(s)	27, 59
Asp700I	GAANNNNTTC	2 cut(s)	537, 1197
AspA2I	CCTAGG	1 cut(s)	929
AspLEI	GCGC	4 cut(s)	246, 343, 440, 639
AspS9I	GGNCC	5 cut(s)	305, 502, 612, 1172, 1652
AsuHPI	GGTGA	4 cut(s)	113, 460, 1202, 1399
AsuII	TTCGAA	2 cut(s)	788, 1338
AvaII	GGWCC	2 cut(s)	305, 1172
AvrII	CCTAGG	1 cut(s)	929
BaeGI	GKGCMC	1 cut(s)	657
BaeI	ACNNNNGTAYC	4 cut(s)	948, 981, 1614, 1647
BalI	TGGCCA	2 cut(s)	630, 1307
BamHI	GGATCC	1 cut(s)	1565
BanI	GGYRCC	1 cut(s)	1633
BanII	GRGCYC	2 cut(s)	171, 1111
Bbv12I	GWGCWC	4 cut(s)	171, 429, 657, 1285
BbvCI	CCTCAGC	1 cut(s)	1023
BccI	CCATC	5 cut(s)	20, 165, 226, 317, 639
BceAI	ACGGC	1 cut(s)	221
BciT130I	CCWGG	2 cut(s)	1218, 1236
BcoDI	GTCTC	2 cut(s)	256, 1379
BfaI	CTAG	5 cut(s)	930, 1101, 1163, 1368, 1595
BfmI	CTRYAG	3 cut(s)	359, 1011, 1050
BfuAI	ACCTGC	1 cut(s)	186
BlnI	CCTAGG	1 cut(s)	929
Bme1390I	CCNGG	2 cut(s)	1218, 1236
Bme18I	GGWCC	2 cut(s)	305, 1172
BmgBI	CACGTC	1 cut(s)	1500
BmgT120I	GGNCC	5 cut(s)	305, 502, 612, 1172, 1652
BmiI	GGNNCC	5 cut(s)	307, 571, 1108, 1567, 1635
BmrFI	CCNGG	2 cut(s)	1218, 1236
BmrI	ACTGGG	1 cut(s)	1249
BmsI	GCATC	6 cut(s)	89, 731, 832, 1075, 1393, 1415
BmuI	ACTGGG	1 cut(s)	1249
Bpu10I	CCTNAGC	2 cut(s)	1023, 1284
Bpu14I	TTCGAA	2 cut(s)	788, 1338
BpuEI	CTTGAG	1 cut(s)	727
BsaBI	GATNNNNATC	2 cut(s)	194, 682
BsaHI	GRCGYC	2 cut(s)	227, 848
BsaI	GGTCTC	2 cut(s)	256, 1379
BsaJI	CCNNGG	3 cut(s)	929, 1186, 1235
BsaXI	ACNNNNNCTCC	2 cut(s)	1185, 1215
Bsc4I	CCNNNNNNNGG	8 cut(s)	91, 184, 479, 1181, 1261, 1384, 1517, 1561
Bse118I	RCCGGY	1 cut(s)	215
Bse1I	ACTGG	3 cut(s)	565, 976, 1255
Bse3DI	GCAATG	3 cut(s)	600, 717, 735
Bse8I	GATNNNNATC	2 cut(s)	194, 682
BseBI	CCWGG	2 cut(s)	1218, 1236
BseDI	CCNNGG	3 cut(s)	929, 1186, 1235
BseGI	GGATG	4 cut(s)	12, 80, 939, 1408
BseJI	GATNNNNATC	2 cut(s)	194, 682
BseLI	CCNNNNNNNGG	8 cut(s)	91, 184, 479, 1181, 1261, 1384, 1517, 1561
BseMI	GCAATG	3 cut(s)	600, 717, 735
BseMII	CTCAG	6 cut(s)	146, 336, 362, 609, 1014, 1298
BseNI	ACTGG	3 cut(s)	565, 976, 1255
BseSI	GKGCMC	1 cut(s)	657
BsgI	GTGCAG	1 cut(s)	1062
Bsh1236I	CGCG	2 cut(s)	515, 639
BshFI	GGCC	6 cut(s)	503, 614, 630, 1185, 1307, 1653
BshNI	GGYRCC	1 cut(s)	1633
BsiHKAI	GWGCWC	4 cut(s)	171, 429, 657, 1285
BsiSI	CCGG	1 cut(s)	216
BslFI	GGGAC	2 cut(s)	308, 982
BslI	CCNNNNNNNGG	8 cut(s)	91, 184, 479, 1181, 1261, 1384, 1517, 1561
BsmAI	GTCTC	2 cut(s)	256, 1379
BsmFI	GGGAC	2 cut(s)	308, 982
BsmI	GAATGC	3 cut(s)	592, 1381, 1605
BsnI	GGCC	6 cut(s)	503, 614, 630, 1185, 1307, 1653
Bso31I	GGTCTC	2 cut(s)	256, 1379
Bsp119I	TTCGAA	2 cut(s)	788, 1338
Bsp1286I	GDGCHC	5 cut(s)	171, 429, 657, 1111, 1285
Bsp1407I	TGTACA	1 cut(s)	192
Bsp143I	GATC	6 cut(s)	221, 353, 469, 677, 1322, 1565
BspANI	GGCC	6 cut(s)	503, 614, 630, 1185, 1307, 1653
BspCNI	CTCAG	6 cut(s)	145, 335, 361, 610, 1015, 1297
BspFNI	CGCG	2 cut(s)	515, 639
BspHI	TCATGA	1 cut(s)	1477
BspLI	GGNNCC	5 cut(s)	307, 571, 1108, 1567, 1635
BspMAI	CTGCAG	3 cut(s)	363, 1015, 1054
BspMI	ACCTGC	1 cut(s)	186
BspPI	GGATC	5 cut(s)	229, 464, 1330, 1560, 1573
BspT104I	TTCGAA	2 cut(s)	788, 1338
BspT107I	GGYRCC	1 cut(s)	1633
BspTNI	GGTCTC	2 cut(s)	256, 1379
BsrBI	CCGCTC	2 cut(s)	102, 385
BsrDI	GCAATG	3 cut(s)	600, 717, 735
BsrFI	RCCGGY	1 cut(s)	215
BsrGI	TGTACA	1 cut(s)	192
BsrI	ACTGG	3 cut(s)	565, 976, 1255
BssAI	RCCGGY	1 cut(s)	215
BssECI	CCNNGG	3 cut(s)	929, 1186, 1235
BssMI	GATC	6 cut(s)	221, 353, 469, 677, 1322, 1565
BssNI	GRCGYC	2 cut(s)	227, 848
BssT1I	CCWWGG	1 cut(s)	929
Bst2UI	CCWGG	2 cut(s)	1218, 1236
Bst4CI	ACNGT	5 cut(s)	43, 267, 709, 1120, 1315
BstACI	GRCGYC	2 cut(s)	227, 848
BstAPI	GCANNNNNTGC	1 cut(s)	1085
BstAUI	TGTACA	1 cut(s)	192
BstBI	TTCGAA	2 cut(s)	788, 1338
BstC8I	GCNNGC	7 cut(s)	97, 210, 217, 383, 498, 774, 945
BstDEI	CTNAG	6 cut(s)	132, 322, 348, 618, 1023, 1284
BstF5I	GGATG	4 cut(s)	12, 80, 939, 1408
BstFNI	CGCG	2 cut(s)	515, 639
BstHHI	GCGC	4 cut(s)	246, 343, 440, 639
BstKTI	GATC	6 cut(s)	224, 356, 472, 680, 1325, 1568
BstMAI	GTCTC	2 cut(s)	256, 1379
BstMBI	GATC	6 cut(s)	221, 353, 469, 677, 1322, 1565
BstMWI	GCNNNNNNNGC	7 cut(s)	611, 636, 1019, 1076, 1085, 1541, 1550
BstNI	CCWGG	2 cut(s)	1218, 1236
BstNSI	RCATGY	1 cut(s)	776
BstSCI	CCNGG	2 cut(s)	1216, 1234
BstSFI	CTRYAG	3 cut(s)	359, 1011, 1050
BstSLI	GKGCMC	1 cut(s)	657
BstUI	CGCG	2 cut(s)	515, 639
BstX2I	RGATCY	1 cut(s)	1565
BstYI	RGATCY	1 cut(s)	1565
BsuRI	GGCC	6 cut(s)	503, 614, 630, 1185, 1307, 1653
BtgZI	GCGATG	1 cut(s)	203
BtrI	CACGTC	1 cut(s)	1500
BtsCI	GGATG	4 cut(s)	12, 80, 939, 1408
BtsI	GCAGTG	2 cut(s)	571, 1047
BtsIMutI	CAGTG	3 cut(s)	571, 1047, 1262
BveI	ACCTGC	1 cut(s)	186
Cac8I	GCNNGC	7 cut(s)	97, 210, 217, 383, 498, 774, 945
CaiI	CAGNNNCTG	1 cut(s)	1022
CciI	TCATGA	1 cut(s)	1477
CfoI	GCGC	4 cut(s)	246, 343, 440, 639
Cfr10I	RCCGGY	1 cut(s)	215
Cfr13I	GGNCC	5 cut(s)	305, 502, 612, 1172, 1652
CseI	GACGC	3 cut(s)	235, 834, 856
Csp6I	GTAC	2 cut(s)	193, 957
CviAII	CATG	7 cut(s)	454, 583, 668, 712, 773, 1082, 1478
CviQI	GTAC	2 cut(s)	193, 957
DdeI	CTNAG	6 cut(s)	132, 322, 348, 618, 1023, 1284
DpnI	GATC	6 cut(s)	223, 355, 471, 679, 1324, 1567
DpnII	GATC	6 cut(s)	221, 353, 469, 677, 1322, 1565
DraIII	CACNNNGTG	2 cut(s)	953, 1181
EaeI	YGGCCR	2 cut(s)	628, 1305
EciI	GGCGGA	1 cut(s)	234
Ecl136II	GAGCTC	1 cut(s)	169
Eco130I	CCWWGG	1 cut(s)	929
Eco24I	GRGCYC	2 cut(s)	171, 1111
Eco31I	GGTCTC	2 cut(s)	256, 1379
Eco32I	GATATC	1 cut(s)	373
Eco47I	GGWCC	2 cut(s)	305, 1172
Eco53kI	GAGCTC	1 cut(s)	169
Eco57I	CTGAAG	1 cut(s)	816
EcoICRI	GAGCTC	1 cut(s)	169
EcoRI	GAATTC	3 cut(s)	800, 1440, 1616
EcoRII	CCWGG	2 cut(s)	1216, 1234
EcoRV	GATATC	1 cut(s)	373
EcoT14I	CCWWGG	1 cut(s)	929
EcoT22I	ATGCAT	1 cut(s)	1408
EcoT38I	GRGCYC	2 cut(s)	171, 1111
ErhI	CCWWGG	1 cut(s)	929
FaeI	CATG	7 cut(s)	457, 586, 671, 715, 776, 1085, 1481
FalI	AAGNNNNNCTT	2 cut(s)	283, 315
FaqI	GGGAC	2 cut(s)	308, 982
FatI	CATG	7 cut(s)	453, 582, 667, 711, 772, 1081, 1477
FauI	CCCGC	2 cut(s)	201, 378
FokI	GGATG	3 cut(s)	67, 946, 1415
FriOI	GRGCYC	2 cut(s)	171, 1111
FspBI	CTAG	5 cut(s)	930, 1101, 1163, 1368, 1595
GlaI	GCGC	4 cut(s)	245, 342, 439, 638
HaeIII	GGCC	6 cut(s)	503, 614, 630, 1185, 1307, 1653
HapII	CCGG	1 cut(s)	216
HgaI	GACGC	3 cut(s)	235, 834, 856
HhaI	GCGC	4 cut(s)	246, 343, 440, 639
Hin1I	GRCGYC	2 cut(s)	227, 848
Hin1II	CATG	7 cut(s)	457, 586, 671, 715, 776, 1085, 1481
Hin6I	GCGC	4 cut(s)	244, 341, 438, 637
HinP1I	GCGC	4 cut(s)	244, 341, 438, 637
HindIII	AAGCTT	1 cut(s)	1068
HinfI	GANTC	4 cut(s)	118, 346, 1481, 1507
HpaII	CCGG	1 cut(s)	216
HphI	GGTGA	4 cut(s)	113, 460, 1202, 1399
Hpy166II	GTNNAC	6 cut(s)	451, 655, 1160, 1175, 1193, 1246
Hpy188I	TCNGA	5 cut(s)	17, 166, 325, 351, 796
Hpy188III	TCNNGA	3 cut(s)	467, 744, 1478
Hpy8I	GTNNAC	6 cut(s)	451, 655, 1160, 1175, 1193, 1246
Hpy99I	CGWCG	3 cut(s)	229, 277, 850
HpyAV	CCTTC	3 cut(s)	982, 1234, 1570
HpyCH4III	ACNGT	5 cut(s)	43, 267, 709, 1120, 1315
HpyCH4IV	ACGT	4 cut(s)	315, 1156, 1177, 1499
HpyF10VI	GCNNNNNNNGC	7 cut(s)	611, 636, 1019, 1076, 1085, 1541, 1550
HpyF3I	CTNAG	6 cut(s)	132, 322, 348, 618, 1023, 1284
HpySE526I	ACGT	4 cut(s)	315, 1156, 1177, 1499
Hsp92I	GRCGYC	2 cut(s)	227, 848
Hsp92II	CATG	7 cut(s)	457, 586, 671, 715, 776, 1085, 1481
HspAI	GCGC	4 cut(s)	244, 341, 438, 637
KroI	GCCGGC	1 cut(s)	215
KroNI	GCCGGC	1 cut(s)	217
Kzo9I	GATC	6 cut(s)	221, 353, 469, 677, 1322, 1565
LmnI	GCTCC	3 cut(s)	141, 388, 1106
LweI	GCATC	6 cut(s)	89, 731, 832, 1075, 1393, 1415
MaeI	CTAG	5 cut(s)	930, 1101, 1163, 1368, 1595
MaeII	ACGT	4 cut(s)	315, 1156, 1177, 1499
MaeIII	GTNAC	8 cut(s)	201, 1035, 1045, 1295, 1331, 1470, 1482, 1495
MalI	GATC	6 cut(s)	223, 355, 471, 679, 1324, 1567
MbiI	CCGCTC	2 cut(s)	102, 385
MboI	GATC	6 cut(s)	221, 353, 469, 677, 1322, 1565
MboII	GAAGA	5 cut(s)	678, 809, 1150, 1625, 1654
MflI	RGATCY	1 cut(s)	1565
MhlI	GDGCHC	5 cut(s)	171, 429, 657, 1111, 1285
MlsI	TGGCCA	2 cut(s)	630, 1307
MluNI	TGGCCA	2 cut(s)	630, 1307
MlyI	GAGTC	3 cut(s)	112, 340, 1490
MmeI	TCCRAC	2 cut(s)	40, 497
MnlI	CCTC	9 cut(s)	280, 331, 511, 589, 1018, 1196, 1255, 1430, 1555
Mox20I	TGGCCA	2 cut(s)	630, 1307
Mph1103I	ATGCAT	1 cut(s)	1408
MroNI	GCCGGC	1 cut(s)	215
MroXI	GAANNNNTTC	2 cut(s)	537, 1197
MscI	TGGCCA	2 cut(s)	630, 1307
MseI	TTAA	6 cut(s)	54, 672, 738, 816, 854, 1344
MslI	CAYNNNNRTG	1 cut(s)	660
Msp20I	TGGCCA	2 cut(s)	630, 1307
MspA1I	CMGCKG	2 cut(s)	617, 876
MspI	CCGG	1 cut(s)	216
MspR9I	CCNGG	2 cut(s)	1218, 1236
Mva1269I	GAATGC	3 cut(s)	592, 1381, 1605
MvaI	CCWGG	2 cut(s)	1218, 1236
MvnI	CGCG	2 cut(s)	515, 639
MwoI	GCNNNNNNNGC	7 cut(s)	611, 636, 1019, 1076, 1085, 1541, 1550
NaeI	GCCGGC	1 cut(s)	217
NdeII	GATC	6 cut(s)	221, 353, 469, 677, 1322, 1565
NgoMIV	GCCGGC	1 cut(s)	215
NlaIII	CATG	7 cut(s)	457, 586, 671, 715, 776, 1085, 1481
NlaIV	GGNNCC	5 cut(s)	307, 571, 1108, 1567, 1635
NmuCI	GTSAC	5 cut(s)	201, 1045, 1331, 1482, 1495
NsiI	ATGCAT	1 cut(s)	1408
NspI	RCATGY	1 cut(s)	776
NspV	TTCGAA	2 cut(s)	788, 1338
PaeI	GCATGC	1 cut(s)	776
PagI	TCATGA	1 cut(s)	1477
PaqCI	CACCTGC	1 cut(s)	186
PctI	GAATGC	3 cut(s)	592, 1381, 1605
PdiI	GCCGGC	1 cut(s)	217
PdmI	GAANNNNTTC	2 cut(s)	537, 1197
PfeI	GAWTC	1 cut(s)	1507
PflMI	CCANNNNNTGG	3 cut(s)	91, 479, 1181
PleI	GAGTC	3 cut(s)	112, 340, 1489
PpsI	GAGTC	3 cut(s)	112, 340, 1489
Psp124BI	GAGCTC	1 cut(s)	171
Psp1406I	AACGTT	1 cut(s)	315
Psp6I	CCWGG	2 cut(s)	1216, 1234
PspGI	CCWGG	2 cut(s)	1216, 1234
PspN4I	GGNNCC	5 cut(s)	307, 571, 1108, 1567, 1635
PspPI	GGNCC	5 cut(s)	305, 502, 612, 1172, 1652
PstI	CTGCAG	3 cut(s)	363, 1015, 1054
PstNI	CAGNNNCTG	1 cut(s)	1022
PsuI	RGATCY	1 cut(s)	1565
RsaI	GTAC	2 cut(s)	194, 958
RsaNI	GTAC	2 cut(s)	193, 957
RseI	CAYNNNNRTG	1 cut(s)	660
SacI	GAGCTC	1 cut(s)	171
SaqAI	TTAA	6 cut(s)	54, 672, 738, 816, 854, 1344
Sau3AI	GATC	6 cut(s)	221, 353, 469, 677, 1322, 1565
Sau96I	GGNCC	5 cut(s)	305, 502, 612, 1172, 1652
SchI	GAGTC	3 cut(s)	112, 340, 1490
ScrFI	CCNGG	2 cut(s)	1218, 1236
SduI	GDGCHC	5 cut(s)	171, 429, 657, 1111, 1285
SfaNI	GCATC	6 cut(s)	89, 731, 832, 1075, 1393, 1415
SfcI	CTRYAG	3 cut(s)	359, 1011, 1050
SfuI	TTCGAA	2 cut(s)	788, 1338
SinI	GGWCC	2 cut(s)	305, 1172
SmiMI	CAYNNNNRTG	1 cut(s)	660
SmlI	CTYRAG	1 cut(s)	742
SmoI	CTYRAG	1 cut(s)	742
SphI	GCATGC	1 cut(s)	776
SspMI	CTAG	5 cut(s)	930, 1101, 1163, 1368, 1595
SstI	GAGCTC	1 cut(s)	171
StyD4I	CCNGG	2 cut(s)	1216, 1234
StyI	CCWWGG	1 cut(s)	929
TaaI	ACNGT	5 cut(s)	43, 267, 709, 1120, 1315
TaiI	ACGT	4 cut(s)	318, 1159, 1180, 1502
TaqI	TCGA	6 cut(s)	224, 272, 369, 788, 1338, 1620
TatI	WGTACW	1 cut(s)	192
TauI	GCSGC	8 cut(s)	102, 239, 381, 503, 617, 642, 879, 1538
TfiI	GAWTC	1 cut(s)	1507
Tru1I	TTAA	6 cut(s)	54, 672, 738, 816, 854, 1344
Tru9I	TTAA	6 cut(s)	54, 672, 738, 816, 854, 1344
TscAI	CASTG	3 cut(s)	571, 1054, 1262
TseFI	GTSAC	5 cut(s)	201, 1045, 1331, 1482, 1495
Tsp45I	GTSAC	5 cut(s)	201, 1045, 1331, 1482, 1495
TspDTI	ATGAA	3 cut(s)	599, 1151, 1466
TspRI	CASTG	3 cut(s)	571, 1054, 1262
Van91I	CCANNNNNTGG	3 cut(s)	91, 479, 1181
VneI	GTGCAC	1 cut(s)	653
VpaK11BI	GGWCC	2 cut(s)	305, 1172
XapI	RAATTY	6 cut(s)	364, 757, 800, 1440, 1461, 1616
XceI	RCATGY	1 cut(s)	776
XcmI	CCANNNNNNNNNTGG	1 cut(s)	549
XmaJI	CCTAGG	1 cut(s)	929
XmnI	GAANNNNTTC	2 cut(s)	537, 1197
XspI	CTAG	5 cut(s)	930, 1101, 1163, 1368, 1595
Zsp2I	ATGCAT	1 cut(s)	1408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.