Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0003338

Physical Location & Seq

Genomic Coordinates Reverse (-)

29589662 .. 29593593

Gene Structure 3932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g27280.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGAATCTCGGACTGCCTATTGCAAACTTATATGGGCCAACTCACCAGCCCATGAGCCAGACCATACGACCCAAAACGACAGTCGGGTTTGTTAAGGCGACTGCGTTTAGTCCAAAAGCATCCCGCTTTCTGGCACGCCGCTCAACAATTTGGACTCACCCTACCCCTCTGCTCCCGTTCCATTCTTCTCTCCATAAGTCCGAGCTCAACCACCTGCAAATGGCGATGTACCTCGTGTCACGGCGGGCGGCCGGCGGATCGACGCCGTTGGCAGCGTTGCGCTACGCTACTTCTTTGAGACCGTATTCGACGAAGTTTAGAGAGGAAAGGGACACTTTTGGACCCATCAACGTTCCCTCAGACAAGCTGTGGGGGGCGCAGACTCAGAGATCGCTGCAGAATTTCGATATCGGCGGCGAGCGGGAGCGAATGCCCGAACCCATTGTTCGTGCTTTTGGGGTGCTCAAAAAATGCGCTGCAAAGGTGAACATGGAGTATGGTCTTGATCCAACTATTGGGAAAGCAGTAATGCAAGCCGCCCAAGAAGTCGCCGAGGGGAAGCTCAACGAACACTTTCCGCTTGTCATCTGGCAGACTGGCAGTGGAACCCAAAGCAACATGAATGCCAATGAGGTCATTGCGAACAGGGCCGCTGAGATACTTGGCCATCAGCGCGGCGAAAAGTTTGTGCACCCGAATGACCATGTTAATAGATCACAATCTTCTAATGACACTTTCCCGACGGTCATGCACATTGCATCTGCAATGGAAATTAACTCAAGACTGATACCAAATTTGCAAACTTTGCATGCTGCCCTACATTCGAAGTCTGAAGAATTCAAAGATATTGTTAAAATTGGACGTACTCACACACAAGATGCGACGCCTTTAACTCTTGGGCAAGAGTTCAGCGGCTATTCAACACAAGTGAAATATGGAATTGAACGAGTTTTGCTTACTCTACCTAGGATGTATCAGCTTGCACAGGGTGGTACTGCTGTTGGGACTGGATTGAACACAAAGAAGGGATTTGATGTAAAGATAGCTGCAGCAGTAGCTGAGGAAACAAAGTTACCATTTGTCACTGCAGAAAACAAGTTTGAAGCTTTGGCTGCACATGATGCTTTTGTCCAAACTAGCGGAGCCCTGAACACAGTTGCTACTTCTTTGATGAAGATTGCAAATGATATACGTTTACTAGGAAGTGGTCCTCGTTGTGGCCTTGGTGAACTCATTCTCCCTGAAAACGAGCCTGGTAGCAGCATTATGCCTGGGAAGGTAAACCCTACCCAGTGTGAGGCTCTCACAATGGTCTGTGCTCAGGTTATGGGTAACAATGTGGCCATTACGGTAGGTGGATCAAACGGTCACTTCGAACTTAATGTGTTCAAGCCAATGATTGCTAGTGGTCTCCTGCATTCGGTGAGATTGCTTGGGGATGCATCTGCTTCCTTTGAAAAGAACTGCGTGAGAGGAATTCAAGCTAATAGGGAAAGAATTTCAAAGTTACTTCATGAGTCACTTATGTTGGTCACGTCCTTGAATCCTAAAATTGGTTATGATAATGCTGCGGCAGTTGCAAAGACAGCCCACAAGGAGGGATCCACTTTGAAGGAAGCTGCATTGAAACTAGGAATGCTATCCAGCGAAGAATTCGATACTCTTGTGGTGCCAGAGAAGATGATTGGCCCAACCGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004333 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0006106 GO:0006108 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009060 GO:0009266 GO:0009409 GO:0009628 GO:0009631 GO:0009651 GO:0009856 GO:0009987 GO:0010109 GO:0015980 GO:0016829 GO:0016835 GO:0016836 GO:0016999 GO:0017144 GO:0019222 GO:0019752 GO:0022414 GO:0031323 GO:0032501 GO:0032502 GO:0042126 GO:0042128 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045333 GO:0048856 GO:0048868 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0055114 GO:0065007 GO:0071704 GO:0071941 GO:0072350 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00020 ko00620 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko04934 ko05200 ko05211 map00020 map00620 map00720 map01100 map01110 map01120 map01130 map01200 map04934 map05200 map05211

Pfam Domains

Protein Families

FumaraseC_C Lyase_1

Protein Analysis

567

Amino Acids

61.41

Weight (kDa)

9.15

Isoelectric Point (pI)

32.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003338)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47510 AT2G47510 AT2G47510 AT5G50950 AT5G50950 AT5G50950 AT5G50950
fragaria_vesca	FvH4_2g26121 FvH4_2g26121 FvH4_2g26140 FvH4_2g26140
malus_domestica	MD00G1140200.v1.1 MD03G1292300.v1.1
prunus_persica	Prupe.8G265300_v2.0.a1 Prupe.8G265300_v2.0.a1 Prupe.8G265300_v2.0.a1
pyrus_communis	pycom03g23150 pycom11g27280
rosa_chinensis	RchiOBHm_Chr6g0294511 RchiOBHm_Chr6g0294521
rosa_laevigata	RLG00000011863
rosa_multiflora	Rmu_ssc0000248.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173260 Rroxscaffold_7G00173270
rosa_rugosa	Rorug06G0245500 Rorug06G0245500
rosa_samantha	Rh6AG357800 Rh6AG357900 Rh6BG364700 Rh6BG364800 Rh6CG371800 Rh6CG371900 Rh6DG358600 Rh6DG358700
rosa_wichuraiana	Rw6G031210 Rw6G031220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	222
Acc36I	ACCTGC	1 cut(s)	222
AccB1I	GGYRCC	1 cut(s)	1669
AccB7I	CCANNNNNTGG	1 cut(s)	515
AccBSI	CCGCTC	2 cut(s)	141, 421
AccII	CGCG	1 cut(s)	675
AclI	AACGTT	1 cut(s)	351
AclWI	GGATC	5 cut(s)	265, 500, 1366, 1596, 1609
AcoI	YGGCCR	3 cut(s)	249, 664, 1341
AcsI	RAATTY	6 cut(s)	400, 793, 836, 1476, 1497, 1652
AcuI	CTGAAG	1 cut(s)	852
AcyI	GRCGYC	2 cut(s)	263, 884
AdeI	CACNNNGTG	1 cut(s)	989
AfaI	GTAC	3 cut(s)	230, 865, 994
AfiI	CCNNNNNNNGG	8 cut(s)	130, 220, 515, 1217, 1297, 1420, 1553, 1597
AjiI	CACGTC	1 cut(s)	1536
AjnI	CCWGG	2 cut(s)	1252, 1270
AloI	GAACNNNNNNTCC	2 cut(s)	1221, 1253
AluBI	AGCT	9 cut(s)	205, 367, 562, 979, 1046, 1058, 1106, 1484, 1619
AluI	AGCT	9 cut(s)	205, 367, 562, 979, 1046, 1058, 1106, 1484, 1619
Alw21I	GWGCWC	4 cut(s)	207, 465, 693, 1321
Alw26I	GTCTC	2 cut(s)	292, 1415
Alw44I	GTGCAC	1 cut(s)	689
AlwI	GGATC	5 cut(s)	265, 500, 1366, 1596, 1609
AlwNI	CAGNNNCTG	1 cut(s)	1058
AoxI	GGCC	7 cut(s)	35, 249, 648, 664, 1219, 1341, 1687
ApaLI	GTGCAC	1 cut(s)	689
ApoI	RAATTY	6 cut(s)	400, 793, 836, 1476, 1497, 1652
ArsI	GACNNNNNNTTYG	2 cut(s)	66, 98
Asp700I	GAANNNNTTC	2 cut(s)	573, 1233
AspA2I	CCTAGG	1 cut(s)	965
AspLEI	GCGC	4 cut(s)	282, 379, 476, 675
AspS9I	GGNCC	5 cut(s)	35, 341, 648, 1208, 1688
AsuHPI	GGTGA	5 cut(s)	35, 149, 496, 1238, 1435
AsuII	TTCGAA	2 cut(s)	824, 1374
AvaII	GGWCC	2 cut(s)	341, 1208
AvrII	CCTAGG	1 cut(s)	965
BaeGI	GKGCMC	1 cut(s)	693
BaeI	ACNNNNGTAYC	4 cut(s)	984, 1017, 1650, 1683
BalI	TGGCCA	2 cut(s)	666, 1343
BamHI	GGATCC	1 cut(s)	1601
BanI	GGYRCC	1 cut(s)	1669
BanII	GRGCYC	2 cut(s)	207, 1147
BauI	CACGAG	1 cut(s)	233
Bbv12I	GWGCWC	4 cut(s)	207, 465, 693, 1321
BbvCI	CCTCAGC	1 cut(s)	1059
BccI	CCATC	2 cut(s)	353, 675
BceAI	ACGGC	2 cut(s)	250, 257
BcgI	CGANNNNNNTGC	2 cut(s)	730, 764
BciT130I	CCWGG	2 cut(s)	1254, 1272
BcoDI	GTCTC	2 cut(s)	292, 1415
BfaI	CTAG	5 cut(s)	966, 1137, 1199, 1404, 1631
BfmI	CTRYAG	3 cut(s)	395, 1047, 1086
BfuAI	ACCTGC	1 cut(s)	222
BlnI	CCTAGG	1 cut(s)	965
Bme1390I	CCNGG	2 cut(s)	1254, 1272
Bme18I	GGWCC	2 cut(s)	341, 1208
BmgBI	CACGTC	1 cut(s)	1536
BmgT120I	GGNCC	5 cut(s)	35, 341, 648, 1208, 1688
BmiI	GGNNCC	5 cut(s)	343, 607, 1144, 1603, 1671
BmrFI	CCNGG	2 cut(s)	1254, 1272
BmrI	ACTGGG	1 cut(s)	1285
BmsI	GCATC	6 cut(s)	128, 767, 868, 1111, 1429, 1451
BmuI	ACTGGG	1 cut(s)	1285
Bpu10I	CCTNAGC	2 cut(s)	1059, 1320
Bpu14I	TTCGAA	2 cut(s)	824, 1374
BpuEI	CTTGAG	1 cut(s)	763
BsaBI	GATNNNNATC	1 cut(s)	718
BsaHI	GRCGYC	2 cut(s)	263, 884
BsaI	GGTCTC	2 cut(s)	292, 1415
BsaJI	CCNNGG	4 cut(s)	552, 965, 1222, 1271
BsaXI	ACNNNNNCTCC	2 cut(s)	1221, 1251
Bsc4I	CCNNNNNNNGG	8 cut(s)	130, 220, 515, 1217, 1297, 1420, 1553, 1597
Bse118I	RCCGGY	1 cut(s)	251
Bse1I	ACTGG	3 cut(s)	601, 1012, 1291
Bse3DI	GCAATG	3 cut(s)	636, 753, 771
Bse8I	GATNNNNATC	1 cut(s)	718
BseBI	CCWGG	2 cut(s)	1254, 1272
BseDI	CCNNGG	4 cut(s)	552, 965, 1222, 1271
BseGI	GGATG	3 cut(s)	119, 975, 1444
BseJI	GATNNNNATC	1 cut(s)	718
BseLI	CCNNNNNNNGG	8 cut(s)	130, 220, 515, 1217, 1297, 1420, 1553, 1597
BseMI	GCAATG	3 cut(s)	636, 753, 771
BseMII	CTCAG	5 cut(s)	372, 398, 645, 1050, 1334
BseNI	ACTGG	3 cut(s)	601, 1012, 1291
BseSI	GKGCMC	1 cut(s)	693
BseX3I	CGGCCG	1 cut(s)	249
BsgI	GTGCAG	1 cut(s)	1098
Bsh1236I	CGCG	1 cut(s)	675
Bsh1285I	CGRYCG	1 cut(s)	252
BshFI	GGCC	7 cut(s)	37, 251, 650, 666, 1221, 1343, 1689
BshNI	GGYRCC	1 cut(s)	1669
BsiEI	CGRYCG	1 cut(s)	252
BsiHKAI	GWGCWC	4 cut(s)	207, 465, 693, 1321
BsiSI	CCGG	1 cut(s)	252
BslFI	GGGAC	2 cut(s)	344, 1018
BslI	CCNNNNNNNGG	8 cut(s)	130, 220, 515, 1217, 1297, 1420, 1553, 1597
BsmAI	GTCTC	2 cut(s)	292, 1415
BsmFI	GGGAC	2 cut(s)	344, 1018
BsmI	GAATGC	4 cut(s)	435, 628, 1417, 1641
BsnI	GGCC	7 cut(s)	37, 251, 650, 666, 1221, 1343, 1689
Bso31I	GGTCTC	2 cut(s)	292, 1415
Bsp119I	TTCGAA	2 cut(s)	824, 1374
Bsp1286I	GDGCHC	5 cut(s)	207, 465, 693, 1147, 1321
Bsp143I	GATC	6 cut(s)	257, 389, 505, 713, 1358, 1601
BspANI	GGCC	7 cut(s)	37, 251, 650, 666, 1221, 1343, 1689
BspCNI	CTCAG	5 cut(s)	371, 397, 646, 1051, 1333
BspFNI	CGCG	1 cut(s)	675
BspHI	TCATGA	1 cut(s)	1513
BspLI	GGNNCC	5 cut(s)	343, 607, 1144, 1603, 1671
BspMAI	CTGCAG	3 cut(s)	399, 1051, 1090
BspMI	ACCTGC	1 cut(s)	222
BspPI	GGATC	5 cut(s)	265, 500, 1366, 1596, 1609
BspT104I	TTCGAA	2 cut(s)	824, 1374
BspT107I	GGYRCC	1 cut(s)	1669
BspTNI	GGTCTC	2 cut(s)	292, 1415
BsrBI	CCGCTC	2 cut(s)	141, 421
BsrDI	GCAATG	3 cut(s)	636, 753, 771
BsrFI	RCCGGY	1 cut(s)	251
BsrI	ACTGG	3 cut(s)	601, 1012, 1291
BssAI	RCCGGY	1 cut(s)	251
BssECI	CCNNGG	4 cut(s)	552, 965, 1222, 1271
BssMI	GATC	6 cut(s)	257, 389, 505, 713, 1358, 1601
BssNI	GRCGYC	2 cut(s)	263, 884
BssSI	CACGAG	1 cut(s)	233
BssT1I	CCWWGG	2 cut(s)	965, 1222
Bst2BI	CACGAG	1 cut(s)	233
Bst2UI	CCWGG	2 cut(s)	1254, 1272
Bst4CI	ACNGT	6 cut(s)	82, 303, 745, 1156, 1351, 1367
BstACI	GRCGYC	2 cut(s)	263, 884
BstAPI	GCANNNNNTGC	2 cut(s)	805, 1121
BstBI	TTCGAA	2 cut(s)	824, 1374
BstC8I	GCNNGC	7 cut(s)	136, 246, 253, 419, 534, 810, 981
BstDEI	CTNAG	5 cut(s)	358, 384, 654, 1059, 1320
BstF5I	GGATG	3 cut(s)	119, 975, 1444
BstFNI	CGCG	1 cut(s)	675
BstHHI	GCGC	4 cut(s)	282, 379, 476, 675
BstKTI	GATC	6 cut(s)	260, 392, 508, 716, 1361, 1604
BstMAI	GTCTC	2 cut(s)	292, 1415
BstMBI	GATC	6 cut(s)	257, 389, 505, 713, 1358, 1601
BstMCI	CGRYCG	1 cut(s)	252
BstMWI	GCNNNNNNNGC	8 cut(s)	647, 672, 805, 1055, 1112, 1121, 1577, 1586
BstNI	CCWGG	2 cut(s)	1254, 1272
BstNSI	RCATGY	1 cut(s)	812
BstSCI	CCNGG	2 cut(s)	1252, 1270
BstSFI	CTRYAG	3 cut(s)	395, 1047, 1086
BstSLI	GKGCMC	1 cut(s)	693
BstUI	CGCG	1 cut(s)	675
BstX2I	RGATCY	1 cut(s)	1601
BstYI	RGATCY	1 cut(s)	1601
BstZI	CGGCCG	1 cut(s)	249
BsuRI	GGCC	7 cut(s)	37, 251, 650, 666, 1221, 1343, 1689
BtgZI	GCGATG	1 cut(s)	239
BtrI	CACGTC	1 cut(s)	1536
BtsCI	GGATG	3 cut(s)	119, 975, 1444
BtsI	GCAGTG	2 cut(s)	607, 1083
BtsIMutI	CAGTG	3 cut(s)	607, 1083, 1298
BveI	ACCTGC	1 cut(s)	222
Cac8I	GCNNGC	7 cut(s)	136, 246, 253, 419, 534, 810, 981
CaiI	CAGNNNCTG	1 cut(s)	1058
CciI	TCATGA	1 cut(s)	1513
CfoI	GCGC	4 cut(s)	282, 379, 476, 675
Cfr10I	RCCGGY	1 cut(s)	251
Cfr13I	GGNCC	5 cut(s)	35, 341, 648, 1208, 1688
CseI	GACGC	2 cut(s)	271, 892
Csp6I	GTAC	3 cut(s)	229, 864, 993
CviAII	CATG	8 cut(s)	52, 490, 619, 704, 748, 809, 1118, 1514
CviQI	GTAC	3 cut(s)	229, 864, 993
DdeI	CTNAG	5 cut(s)	358, 384, 654, 1059, 1320
DpnI	GATC	6 cut(s)	259, 391, 507, 715, 1360, 1603
DpnII	GATC	6 cut(s)	257, 389, 505, 713, 1358, 1601
DraIII	CACNNNGTG	1 cut(s)	989
EaeI	YGGCCR	3 cut(s)	249, 664, 1341
EagI	CGGCCG	1 cut(s)	249
EciI	GGCGGA	1 cut(s)	270
Ecl136II	GAGCTC	1 cut(s)	205
EclXI	CGGCCG	1 cut(s)	249
Eco130I	CCWWGG	2 cut(s)	965, 1222
Eco24I	GRGCYC	2 cut(s)	207, 1147
Eco31I	GGTCTC	2 cut(s)	292, 1415
Eco32I	GATATC	1 cut(s)	409
Eco47I	GGWCC	2 cut(s)	341, 1208
Eco52I	CGGCCG	1 cut(s)	249
Eco53kI	GAGCTC	1 cut(s)	205
Eco57I	CTGAAG	1 cut(s)	852
EcoICRI	GAGCTC	1 cut(s)	205
EcoRI	GAATTC	3 cut(s)	836, 1476, 1652
EcoRII	CCWGG	2 cut(s)	1252, 1270
EcoRV	GATATC	1 cut(s)	409
EcoT14I	CCWWGG	2 cut(s)	965, 1222
EcoT22I	ATGCAT	1 cut(s)	1444
EcoT38I	GRGCYC	2 cut(s)	207, 1147
ErhI	CCWWGG	2 cut(s)	965, 1222
FaeI	CATG	8 cut(s)	55, 493, 622, 707, 751, 812, 1121, 1517
FalI	AAGNNNNNCTT	2 cut(s)	319, 351
FaqI	GGGAC	2 cut(s)	344, 1018
FatI	CATG	8 cut(s)	51, 489, 618, 703, 747, 808, 1117, 1513
FauI	CCCGC	3 cut(s)	131, 237, 414
FokI	GGATG	3 cut(s)	106, 982, 1451
FriOI	GRGCYC	2 cut(s)	207, 1147
FspBI	CTAG	5 cut(s)	966, 1137, 1199, 1404, 1631
GlaI	GCGC	4 cut(s)	281, 378, 475, 674
HaeIII	GGCC	7 cut(s)	37, 251, 650, 666, 1221, 1343, 1689
HapII	CCGG	1 cut(s)	252
HgaI	GACGC	2 cut(s)	271, 892
HhaI	GCGC	4 cut(s)	282, 379, 476, 675
Hin1I	GRCGYC	2 cut(s)	263, 884
Hin1II	CATG	8 cut(s)	55, 493, 622, 707, 751, 812, 1121, 1517
Hin6I	GCGC	4 cut(s)	280, 377, 474, 673
HinP1I	GCGC	4 cut(s)	280, 377, 474, 673
HindIII	AAGCTT	1 cut(s)	1104
HinfI	GANTC	5 cut(s)	4, 154, 382, 1517, 1543
HpaII	CCGG	1 cut(s)	252
HphI	GGTGA	5 cut(s)	35, 149, 496, 1238, 1435
Hpy166II	GTNNAC	5 cut(s)	487, 691, 1196, 1229, 1282
Hpy188I	TCNGA	5 cut(s)	11, 202, 361, 387, 832
Hpy188III	TCNNGA	4 cut(s)	503, 739, 780, 1514
Hpy8I	GTNNAC	5 cut(s)	487, 691, 1196, 1229, 1282
Hpy99I	CGWCG	4 cut(s)	265, 313, 745, 886
HpyAV	CCTTC	3 cut(s)	1018, 1270, 1606
HpyCH4III	ACNGT	6 cut(s)	82, 303, 745, 1156, 1351, 1367
HpyCH4IV	ACGT	4 cut(s)	351, 862, 1192, 1535
HpyF10VI	GCNNNNNNNGC	8 cut(s)	647, 672, 805, 1055, 1112, 1121, 1577, 1586
HpyF3I	CTNAG	5 cut(s)	358, 384, 654, 1059, 1320
HpySE526I	ACGT	4 cut(s)	351, 862, 1192, 1535
Hsp92I	GRCGYC	2 cut(s)	263, 884
Hsp92II	CATG	8 cut(s)	55, 493, 622, 707, 751, 812, 1121, 1517
HspAI	GCGC	4 cut(s)	280, 377, 474, 673
KroI	GCCGGC	1 cut(s)	251
KroNI	GCCGGC	1 cut(s)	253
Kzo9I	GATC	6 cut(s)	257, 389, 505, 713, 1358, 1601
LmnI	GCTCC	3 cut(s)	177, 424, 1142
LweI	GCATC	6 cut(s)	128, 767, 868, 1111, 1429, 1451
MaeI	CTAG	5 cut(s)	966, 1137, 1199, 1404, 1631
MaeII	ACGT	4 cut(s)	351, 862, 1192, 1535
MaeIII	GTNAC	8 cut(s)	237, 1071, 1081, 1331, 1367, 1506, 1518, 1531
MalI	GATC	6 cut(s)	259, 391, 507, 715, 1360, 1603
MbiI	CCGCTC	2 cut(s)	141, 421
MboI	GATC	6 cut(s)	257, 389, 505, 713, 1358, 1601
MboII	GAAGA	6 cut(s)	177, 714, 845, 1186, 1661, 1690
MflI	RGATCY	1 cut(s)	1601
MhlI	GDGCHC	5 cut(s)	207, 465, 693, 1147, 1321
MlsI	TGGCCA	2 cut(s)	666, 1343
MluNI	TGGCCA	2 cut(s)	666, 1343
MlyI	GAGTC	3 cut(s)	148, 376, 1526
MmeI	TCCRAC	1 cut(s)	533
Mox20I	TGGCCA	2 cut(s)	666, 1343
Mph1103I	ATGCAT	1 cut(s)	1444
MroNI	GCCGGC	1 cut(s)	251
MroXI	GAANNNNTTC	2 cut(s)	573, 1233
MscI	TGGCCA	2 cut(s)	666, 1343
MseI	TTAA	6 cut(s)	93, 708, 774, 852, 890, 1380
MslI	CAYNNNNRTG	1 cut(s)	696
Msp20I	TGGCCA	2 cut(s)	666, 1343
MspA1I	CMGCKG	2 cut(s)	653, 912
MspI	CCGG	1 cut(s)	252
MspR9I	CCNGG	2 cut(s)	1254, 1272
Mva1269I	GAATGC	4 cut(s)	435, 628, 1417, 1641
MvaI	CCWGG	2 cut(s)	1254, 1272
MvnI	CGCG	1 cut(s)	675
MwoI	GCNNNNNNNGC	8 cut(s)	647, 672, 805, 1055, 1112, 1121, 1577, 1586
NaeI	GCCGGC	1 cut(s)	253
NdeII	GATC	6 cut(s)	257, 389, 505, 713, 1358, 1601
NgoMIV	GCCGGC	1 cut(s)	251
NlaIII	CATG	8 cut(s)	55, 493, 622, 707, 751, 812, 1121, 1517
NlaIV	GGNNCC	5 cut(s)	343, 607, 1144, 1603, 1671
NmeAIII	GCCGAG	1 cut(s)	577
NmuCI	GTSAC	5 cut(s)	237, 1081, 1367, 1518, 1531
NsiI	ATGCAT	1 cut(s)	1444
NspI	RCATGY	1 cut(s)	812
NspV	TTCGAA	2 cut(s)	824, 1374
PaeI	GCATGC	1 cut(s)	812
PagI	TCATGA	1 cut(s)	1513
PaqCI	CACCTGC	1 cut(s)	222
PcsI	WCGNNNNNNNCGW	1 cut(s)	1371
PctI	GAATGC	4 cut(s)	435, 628, 1417, 1641
PdiI	GCCGGC	1 cut(s)	253
PdmI	GAANNNNTTC	2 cut(s)	573, 1233
PfeI	GAWTC	2 cut(s)	4, 1543
PflMI	CCANNNNNTGG	1 cut(s)	515
PleI	GAGTC	3 cut(s)	148, 376, 1525
PpsI	GAGTC	3 cut(s)	148, 376, 1525
Psp124BI	GAGCTC	1 cut(s)	207
Psp1406I	AACGTT	1 cut(s)	351
Psp6I	CCWGG	2 cut(s)	1252, 1270
PspGI	CCWGG	2 cut(s)	1252, 1270
PspN4I	GGNNCC	5 cut(s)	343, 607, 1144, 1603, 1671
PspPI	GGNCC	5 cut(s)	35, 341, 648, 1208, 1688
PstI	CTGCAG	3 cut(s)	399, 1051, 1090
PstNI	CAGNNNCTG	1 cut(s)	1058
PsuI	RGATCY	1 cut(s)	1601
RsaI	GTAC	3 cut(s)	230, 865, 994
RsaNI	GTAC	3 cut(s)	229, 864, 993
RseI	CAYNNNNRTG	1 cut(s)	696
SacI	GAGCTC	1 cut(s)	207
SaqAI	TTAA	6 cut(s)	93, 708, 774, 852, 890, 1380
Sau3AI	GATC	6 cut(s)	257, 389, 505, 713, 1358, 1601
Sau96I	GGNCC	5 cut(s)	35, 341, 648, 1208, 1688
SchI	GAGTC	3 cut(s)	148, 376, 1526
ScrFI	CCNGG	2 cut(s)	1254, 1272
SduI	GDGCHC	5 cut(s)	207, 465, 693, 1147, 1321
SfaNI	GCATC	6 cut(s)	128, 767, 868, 1111, 1429, 1451
SfcI	CTRYAG	3 cut(s)	395, 1047, 1086
SfuI	TTCGAA	2 cut(s)	824, 1374
SinI	GGWCC	2 cut(s)	341, 1208
SmiMI	CAYNNNNRTG	1 cut(s)	696
SmlI	CTYRAG	1 cut(s)	778
SmoI	CTYRAG	1 cut(s)	778
SphI	GCATGC	1 cut(s)	812
SspMI	CTAG	5 cut(s)	966, 1137, 1199, 1404, 1631
SstI	GAGCTC	1 cut(s)	207
StyD4I	CCNGG	2 cut(s)	1252, 1270
StyI	CCWWGG	2 cut(s)	965, 1222
TaaI	ACNGT	6 cut(s)	82, 303, 745, 1156, 1351, 1367
TaiI	ACGT	4 cut(s)	354, 865, 1195, 1538
TaqI	TCGA	6 cut(s)	260, 308, 405, 824, 1374, 1656
TauI	GCSGC	8 cut(s)	141, 251, 417, 539, 653, 678, 915, 1574
TfiI	GAWTC	2 cut(s)	4, 1543
Tru1I	TTAA	6 cut(s)	93, 708, 774, 852, 890, 1380
Tru9I	TTAA	6 cut(s)	93, 708, 774, 852, 890, 1380
TscAI	CASTG	3 cut(s)	607, 1090, 1298
TseFI	GTSAC	5 cut(s)	237, 1081, 1367, 1518, 1531
Tsp45I	GTSAC	5 cut(s)	237, 1081, 1367, 1518, 1531
TspDTI	ATGAA	4 cut(s)	17, 635, 1187, 1502
TspRI	CASTG	3 cut(s)	607, 1090, 1298
Van91I	CCANNNNNTGG	1 cut(s)	515
VneI	GTGCAC	1 cut(s)	689
VpaK11BI	GGWCC	2 cut(s)	341, 1208
XapI	RAATTY	6 cut(s)	400, 793, 836, 1476, 1497, 1652
XceI	RCATGY	1 cut(s)	812
XmaJI	CCTAGG	1 cut(s)	965
XmnI	GAANNNNTTC	2 cut(s)	573, 1233
XspI	CTAG	5 cut(s)	966, 1137, 1199, 1404, 1631
Zsp2I	ATGCAT	1 cut(s)	1444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.