Rh6CG371900

Fumarate hydratase 1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
55828875 .. 55834054
5180 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG371900.1

Sequence Viewer

Length: 1344 bp
ATGGCGATGTACGTCTTTTCACGGCGAGTAACCGCCGGATCGACGCAGTTAACGGCGTTCCGTTACGCCACTACTTGCTGGAGGAACTATTCGACGTCGTTTCGTGAGGAAAGGGACACCTTTGGACCCATTCTCGTCCCCTCAGACAAACTATGGGGAGCTCAAACTCAGAGATCGTTGCAGAACTTCGATATCGGCGGCGACCGCGAACGAATGCCCGAGCCTATTATTCGCGCCTTCGGTGTCCTCAAGAAATGTGCTGCCAAGGTGAACATGGAGTATGGTCTTGACCAATCTATAGGGAAAGCTATAATGCAGGCTGCACAAGAAGTGGCCGAGGGGAAGCTAAATCAGCACTTTCCACTTGTTGTGTGGCAAACTGGTAGTGGAACACAAAGCAACATGAATGCCAATGAGGTCATTGCAAACAGAGCAGCTGAGATACTTGGACATAAGCGCGGCGAGAAGTTTGTGCATCCGAATGACCATGTTAATAGATCACAGTCGTCTAATGACACTTTCCCAACTGTCATGCACATTGCAACTGCGATGGAAGTAAATTCAAGACTGGTACCAAATTTGAAAACTTTGCATTCTTCTCTACAACAAAAGTCGGATGAGTTCAAAGATATTGTTAAAATTGGACGCACTCACACACAAGATGCAACACCTTTGACTCTTGGGCAAGAGTTTAGCGGCTATTCTACACAGGTGAAGTATGGAATCGAGCGAGTCTTGTGCACTCTACCCCACATGTATCAGCTGGCACAGGGTGGTACTGCTGTTGGGACTGGATTGAATACAAAGAAGGGATTTGATGTAAAGATAGCTGCAGCAGTAGCTGATGAAACAAACTTACCATTTGTCACTGCAGAAAACAAGTTTGAAGCTTTGGCTGCACATGATGCTTTTGTGGAAACTAGTGGAGCCCTGAATACAGTTGCTACTTCTCTGATGAAAATAGCTAATGACATACGTTTATTAGGAAGTGGTCCACGATGTGGTCTTGGTGAACTCATTCTTCCTGAAAATGAGCCTGGAAGCAGCATTATGCCGGGGAAGGTTAACCCAACCCAGTGTGAGGCTATCACAATGGTTTGTGCTCAGGTTATGGGTAACAATGTGGCCATTACAGTAGGTGGATCTAATGGTCATTTTGAACTAAATGTATTCAAGCCAATGATTGCTAGTGCTCTCCTACACGTAAGTACTGCTGTAAATTTTGATGATTTTTATTTGAAATGTCGTACTTACCTGTACATTACAACTAAACTCTATCAACTGGGTAGGCACATTTCTTGCTTTTTAAAAATTTATCTTGCTCTGGAGTTTTCAGCATTATAA

Protein Analysis

447

Amino Acids

49.06

Weight (kDa)

8.32

Isoelectric Point (pI)

31.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lyase_1 PF00206 44 - 372 3.5e-117 Lyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1342
AatII GACGTC 1 cut(s) 98
Acc65I GGTACC 1 cut(s) 571
AccB1I GGYRCC 1 cut(s) 571
AccB7I CCANNNNNTGG 1 cut(s) 1001
AccII CGCG 3 cut(s) 207, 234, 459
AciI CCGC 5 cut(s) 33, 198, 205, 459, 696
AclWI GGATC 2 cut(s) 46, 1150
AcoI YGGCCR 2 cut(s) 333, 1125
AcsI RAATTY 4 cut(s) 559, 577, 1219, 1311
AcyI GRCGYC 1 cut(s) 95
AdeI CACNNNGTG 2 cut(s) 773, 1001
AfaI GTAC 6 cut(s) 11, 573, 778, 1210, 1249, 1259
AfiI CCNNNNNNNGG 2 cut(s) 1001, 1081
AflIII ACRYGT 2 cut(s) 753, 1201
AgsI TTSAA 8 cut(s) 564, 583, 625, 799, 887, 1160, 1174, 1240
AhlI ACTAGT 1 cut(s) 920
AjnI CCWGG 1 cut(s) 1036
AluBI AGCT 9 cut(s) 161, 308, 346, 437, 763, 830, 842, 890, 965
AluI AGCT 9 cut(s) 161, 308, 346, 437, 763, 830, 842, 890, 965
Alw21I GWGCWC 4 cut(s) 163, 743, 1105, 1195
Alw44I GTGCAC 1 cut(s) 739
AlwI GGATC 2 cut(s) 46, 1150
AlwNI CAGNNNCTG 1 cut(s) 842
Ama87I CYCGRG 1 cut(s) 218
AoxI GGCC 2 cut(s) 333, 1125
ApaLI GTGCAC 1 cut(s) 739
ApeKI GCWGC 7 cut(s) 260, 320, 434, 830, 833, 896, 1044
ApoI RAATTY 4 cut(s) 559, 577, 1219, 1311
Asp700I GAANNNNTTC 1 cut(s) 1017
Asp718I GGTACC 1 cut(s) 571
AspLEI GCGC 2 cut(s) 236, 459
AspS9I GGNCC 2 cut(s) 125, 992
AsuC2I CCSGG 1 cut(s) 1056
AsuHPI GGTGA 3 cut(s) 280, 724, 1022
AvaI CYCGRG 1 cut(s) 218
AvaII GGWCC 2 cut(s) 125, 992
BaeGI GKGCMC 1 cut(s) 743
BaeI ACNNNNGTAYC 2 cut(s) 768, 801
BalI TGGCCA 1 cut(s) 1127
BanI GGYRCC 1 cut(s) 571
BanII GRGCYC 2 cut(s) 163, 931
Bbv12I GWGCWC 4 cut(s) 163, 743, 1105, 1195
BbvI GCAGC 7 cut(s) 247, 307, 446, 817, 845, 883, 1056
BccI CCATC 1 cut(s) 544
BceAI ACGGC 2 cut(s) 38, 69
BcgI CGANNNNNNTGC 2 cut(s) 720, 754
BciT130I CCWGG 1 cut(s) 1038
BcnI CCSGG 1 cut(s) 1056
BcuI ACTAGT 1 cut(s) 920
BfaI CTAG 2 cut(s) 921, 1188
BfmI CTRYAG 3 cut(s) 297, 831, 870
BmcAI AGTACT 1 cut(s) 1210
Bme1390I CCNGG 2 cut(s) 1038, 1056
Bme18I GGWCC 2 cut(s) 125, 992
BmeT110I CYCGRG 1 cut(s) 218
BmgT120I GGNCC 2 cut(s) 125, 992
BmiI GGNNCC 3 cut(s) 127, 573, 928
BmrFI CCNGG 2 cut(s) 1038, 1056
BmrI ACTGGG 2 cut(s) 1069, 1292
BmsI GCATC 3 cut(s) 484, 652, 895
BmuI ACTGGG 2 cut(s) 1069, 1292
BpmI CTGGAG 1 cut(s) 100
Bpu10I CCTNAGC 1 cut(s) 1104
BpuEI CTTGAG 1 cut(s) 233
BpuMI CCSGG 1 cut(s) 1056
BsaAI YACGTR 1 cut(s) 1204
BsaHI GRCGYC 1 cut(s) 95
BsaJI CCNNGG 3 cut(s) 264, 336, 1055
Bsc4I CCNNNNNNNGG 2 cut(s) 1001, 1081
Bse1I ACTGG 5 cut(s) 385, 573, 796, 1075, 1287
Bse3DI GCAATG 2 cut(s) 420, 537
BseBI CCWGG 1 cut(s) 1038
BseDI CCNNGG 3 cut(s) 264, 336, 1055
BseGI GGATG 2 cut(s) 475, 622
BseLI CCNNNNNNNGG 2 cut(s) 1001, 1081
BseMI GCAATG 2 cut(s) 420, 537
BseMII CTCAG 4 cut(s) 156, 182, 429, 1118
BseNI ACTGG 5 cut(s) 385, 573, 796, 1075, 1287
BseSI GKGCMC 1 cut(s) 743
BseXI GCAGC 7 cut(s) 247, 307, 446, 817, 845, 883, 1056
BsgI GTGCAG 2 cut(s) 306, 882
Bsh1236I CGCG 3 cut(s) 207, 234, 459
Bsh1285I CGRYCG 1 cut(s) 205
BshFI GGCC 2 cut(s) 335, 1127
BshNI GGYRCC 1 cut(s) 571
BsiEI CGRYCG 1 cut(s) 205
BsiHKAI GWGCWC 4 cut(s) 163, 743, 1105, 1195
BsiHKCI CYCGRG 1 cut(s) 218
BsiSI CCGG 2 cut(s) 36, 1055
BslFI GGGAC 3 cut(s) 122, 128, 802
BslI CCNNNNNNNGG 2 cut(s) 1001, 1081
BsmFI GGGAC 3 cut(s) 122, 128, 802
BsmI GAATGC 3 cut(s) 219, 412, 592
BsnI GGCC 2 cut(s) 335, 1127
BsoBI CYCGRG 1 cut(s) 218
Bsp1286I GDGCHC 5 cut(s) 163, 743, 931, 1105, 1195
Bsp1407I TGTACA 1 cut(s) 1257
Bsp143I GATC 4 cut(s) 38, 173, 497, 1142
BspACI CCGC 5 cut(s) 33, 198, 205, 459, 696
BspANI GGCC 2 cut(s) 335, 1127
BspCNI CTCAG 4 cut(s) 155, 181, 430, 1117
BspFNI CGCG 3 cut(s) 207, 234, 459
BspLI GGNNCC 3 cut(s) 127, 573, 928
BspMAI CTGCAG 2 cut(s) 835, 874
BspPI GGATC 2 cut(s) 46, 1150
BspT107I GGYRCC 1 cut(s) 571
BsrDI GCAATG 2 cut(s) 420, 537
BsrGI TGTACA 1 cut(s) 1257
BsrI ACTGG 5 cut(s) 385, 573, 796, 1075, 1287
BssECI CCNNGG 3 cut(s) 264, 336, 1055
BssMI GATC 4 cut(s) 38, 173, 497, 1142
BssNI GRCGYC 1 cut(s) 95
BssT1I CCWWGG 1 cut(s) 264
Bst2UI CCWGG 1 cut(s) 1038
Bst4CI ACNGT 4 cut(s) 504, 529, 940, 1135
BstACI GRCGYC 1 cut(s) 95
BstAPI GCANNNNNTGC 1 cut(s) 905
BstAUI TGTACA 1 cut(s) 1257
BstBAI YACGTR 1 cut(s) 1204
BstC8I GCNNGC 2 cut(s) 318, 765
BstDEI CTNAG 4 cut(s) 142, 168, 438, 1104
BstF5I GGATG 2 cut(s) 475, 622
BstFNI CGCG 3 cut(s) 207, 234, 459
BstHHI GCGC 2 cut(s) 236, 459
BstKTI GATC 4 cut(s) 41, 176, 500, 1145
BstMBI GATC 4 cut(s) 38, 173, 497, 1142
BstMCI CGRYCG 1 cut(s) 205
BstMWI GCNNNNNNNGC 6 cut(s) 204, 352, 431, 839, 896, 905
BstNI CCWGG 1 cut(s) 1038
BstNSI RCATGY 1 cut(s) 757
BstSCI CCNGG 2 cut(s) 1036, 1054
BstSFI CTRYAG 3 cut(s) 297, 831, 870
BstSLI GKGCMC 1 cut(s) 743
BstUI CGCG 3 cut(s) 207, 234, 459
BstV1I GCAGC 7 cut(s) 247, 307, 446, 817, 845, 883, 1056
BstX2I RGATCY 1 cut(s) 1142
BstYI RGATCY 1 cut(s) 1142
BsuRI GGCC 2 cut(s) 335, 1127
BtgZI GCGATG 2 cut(s) 20, 563
BtsCI GGATG 2 cut(s) 475, 622
BtsI GCAGTG 1 cut(s) 867
BtsIMutI CAGTG 2 cut(s) 867, 1082
Cac8I GCNNGC 2 cut(s) 318, 765
CaiI CAGNNNCTG 1 cut(s) 842
CfoI GCGC 2 cut(s) 236, 459
Cfr13I GGNCC 2 cut(s) 125, 992
CseI GACGC 2 cut(s) 52, 654
Csp6I GTAC 6 cut(s) 10, 572, 777, 1209, 1248, 1258
CviAII CATG 6 cut(s) 274, 403, 488, 532, 754, 902
CviQI GTAC 6 cut(s) 10, 572, 777, 1209, 1248, 1258
DdeI CTNAG 4 cut(s) 142, 168, 438, 1104
DpnI GATC 4 cut(s) 40, 175, 499, 1144
DpnII GATC 4 cut(s) 38, 173, 497, 1142
DraI TTTAAA 1 cut(s) 1308
DraIII CACNNNGTG 2 cut(s) 773, 1001
EaeI YGGCCR 2 cut(s) 333, 1125
Ecl136II GAGCTC 1 cut(s) 161
Eco130I CCWWGG 1 cut(s) 264
Eco24I GRGCYC 2 cut(s) 163, 931
Eco32I GATATC 1 cut(s) 193
Eco47I GGWCC 2 cut(s) 125, 992
Eco53kI GAGCTC 1 cut(s) 161
Eco88I CYCGRG 1 cut(s) 218
EcoICRI GAGCTC 1 cut(s) 161
EcoRII CCWGG 1 cut(s) 1036
EcoRV GATATC 1 cut(s) 193
EcoT14I CCWWGG 1 cut(s) 264
EcoT38I GRGCYC 2 cut(s) 163, 931
ErhI CCWWGG 1 cut(s) 264
FaeI CATG 6 cut(s) 277, 406, 491, 535, 757, 905
FaqI GGGAC 3 cut(s) 122, 128, 802
FatI CATG 6 cut(s) 273, 402, 487, 531, 753, 901
FokI GGATG 2 cut(s) 462, 629
FriOI GRGCYC 2 cut(s) 163, 931
FspBI CTAG 2 cut(s) 921, 1188
GlaI GCGC 2 cut(s) 235, 458
GsuI CTGGAG 1 cut(s) 100
HaeIII GGCC 2 cut(s) 335, 1127
HapII CCGG 2 cut(s) 36, 1055
HgaI GACGC 2 cut(s) 52, 654
HhaI GCGC 2 cut(s) 236, 459
Hin1I GRCGYC 1 cut(s) 95
Hin1II CATG 6 cut(s) 277, 406, 491, 535, 757, 905
Hin6I GCGC 2 cut(s) 234, 457
HinP1I GCGC 2 cut(s) 234, 457
HincII GTYRAC 2 cut(s) 51, 1066
HindII GTYRAC 2 cut(s) 51, 1066
HindIII AAGCTT 1 cut(s) 888
HinfI GANTC 3 cut(s) 676, 723, 732
HpaI GTTAAC 2 cut(s) 51, 1066
HpaII CCGG 2 cut(s) 36, 1055
HphI GGTGA 3 cut(s) 280, 724, 1022
Hpy166II GTNNAC 6 cut(s) 51, 271, 741, 995, 1013, 1066
Hpy188I TCNGA 5 cut(s) 145, 171, 480, 616, 954
Hpy188III TCNNGA 6 cut(s) 104, 250, 287, 564, 1025, 1325
Hpy8I GTNNAC 6 cut(s) 51, 271, 741, 995, 1013, 1066
Hpy99I CGWCG 3 cut(s) 46, 97, 100
HpyAV CCTTC 3 cut(s) 247, 802, 1054
HpyCH4III ACNGT 4 cut(s) 504, 529, 940, 1135
HpyCH4IV ACGT 4 cut(s) 12, 95, 976, 1203
HpyF10VI GCNNNNNNNGC 6 cut(s) 204, 352, 431, 839, 896, 905
HpyF3I CTNAG 4 cut(s) 142, 168, 438, 1104
HpySE526I ACGT 4 cut(s) 12, 95, 976, 1203
Hsp92I GRCGYC 1 cut(s) 95
Hsp92II CATG 6 cut(s) 277, 406, 491, 535, 757, 905
HspAI GCGC 2 cut(s) 234, 457
KpnI GGTACC 1 cut(s) 575
KspAI GTTAAC 2 cut(s) 51, 1066
Kzo9I GATC 4 cut(s) 38, 173, 497, 1142
LmnI GCTCC 2 cut(s) 158, 926
Lsp1109I GCAGC 7 cut(s) 247, 307, 446, 817, 845, 883, 1056
LweI GCATC 3 cut(s) 484, 652, 895
MaeI CTAG 2 cut(s) 921, 1188
MaeII ACGT 4 cut(s) 12, 95, 976, 1203
MaeIII GTNAC 4 cut(s) 28, 62, 865, 1115
MalI GATC 4 cut(s) 40, 175, 499, 1144
MboI GATC 4 cut(s) 38, 173, 497, 1142
MboII GAAGA 2 cut(s) 588, 1013
MflI RGATCY 1 cut(s) 1142
MhlI GDGCHC 5 cut(s) 163, 743, 931, 1105, 1195
MlsI TGGCCA 1 cut(s) 1127
MluCI AATT 5 cut(s) 559, 577, 639, 1219, 1311
MluNI TGGCCA 1 cut(s) 1127
MlyI GAGTC 2 cut(s) 670, 741
MmeI TCCRAC 1 cut(s) 594
MnlI CCTC 7 cut(s) 75, 100, 151, 257, 331, 409, 1075
Mox20I TGGCCA 1 cut(s) 1127
MroXI GAANNNNTTC 1 cut(s) 1017
MscI TGGCCA 1 cut(s) 1127
MseI TTAA 5 cut(s) 50, 492, 636, 1065, 1307
MslI CAYNNNNRTG 1 cut(s) 480
Msp20I TGGCCA 1 cut(s) 1127
MspA1I CMGCKG 2 cut(s) 437, 763
MspI CCGG 2 cut(s) 36, 1055
MspR9I CCNGG 2 cut(s) 1038, 1056
Mva1269I GAATGC 3 cut(s) 219, 412, 592
MvaI CCWGG 1 cut(s) 1038
MvnI CGCG 3 cut(s) 207, 234, 459
MwoI GCNNNNNNNGC 6 cut(s) 204, 352, 431, 839, 896, 905
NciI CCSGG 1 cut(s) 1056
NdeII GATC 4 cut(s) 38, 173, 497, 1142
NlaIII CATG 6 cut(s) 277, 406, 491, 535, 757, 905
NlaIV GGNNCC 3 cut(s) 127, 573, 928
NmeAIII GCCGAG 1 cut(s) 361
NmuCI GTSAC 1 cut(s) 865
NspI RCATGY 1 cut(s) 757
PciI ACATGT 1 cut(s) 753
PctI GAATGC 3 cut(s) 219, 412, 592
PdmI GAANNNNTTC 1 cut(s) 1017
PfeI GAWTC 1 cut(s) 723
PflMI CCANNNNNTGG 1 cut(s) 1001
PleI GAGTC 2 cut(s) 670, 740
PpsI GAGTC 2 cut(s) 670, 740
Ppu21I YACGTR 1 cut(s) 1204
PscI ACATGT 1 cut(s) 753
PsiI TTATAA 1 cut(s) 1342
Psp124BI GAGCTC 1 cut(s) 163
Psp6I CCWGG 1 cut(s) 1036
PspGI CCWGG 1 cut(s) 1036
PspN4I GGNNCC 3 cut(s) 127, 573, 928
PspPI GGNCC 2 cut(s) 125, 992
PstI CTGCAG 2 cut(s) 835, 874
PstNI CAGNNNCTG 1 cut(s) 842
PsuI RGATCY 1 cut(s) 1142
PvuII CAGCTG 2 cut(s) 437, 763
RsaI GTAC 6 cut(s) 11, 573, 778, 1210, 1249, 1259
RsaNI GTAC 6 cut(s) 10, 572, 777, 1209, 1248, 1258
RseI CAYNNNNRTG 1 cut(s) 480
SacI GAGCTC 1 cut(s) 163
SaqAI TTAA 5 cut(s) 50, 492, 636, 1065, 1307
Sau3AI GATC 4 cut(s) 38, 173, 497, 1142
Sau96I GGNCC 2 cut(s) 125, 992
ScaI AGTACT 1 cut(s) 1210
SchI GAGTC 2 cut(s) 670, 741
ScrFI CCNGG 2 cut(s) 1038, 1056
SduI GDGCHC 5 cut(s) 163, 743, 931, 1105, 1195
SfaNI GCATC 3 cut(s) 484, 652, 895
SfcI CTRYAG 3 cut(s) 297, 831, 870
SinI GGWCC 2 cut(s) 125, 992
SmiMI CAYNNNNRTG 1 cut(s) 480
SmlI CTYRAG 1 cut(s) 248
SmoI CTYRAG 1 cut(s) 248
SpeI ACTAGT 1 cut(s) 920
Sse9I AATT 5 cut(s) 559, 577, 639, 1219, 1311
SsiI CCGC 5 cut(s) 33, 198, 205, 459, 696
SspMI CTAG 2 cut(s) 921, 1188
SstI GAGCTC 1 cut(s) 163
StyD4I CCNGG 2 cut(s) 1036, 1054
StyI CCWWGG 1 cut(s) 264
TaaI ACNGT 4 cut(s) 504, 529, 940, 1135
TaiI ACGT 4 cut(s) 15, 98, 979, 1206
TaqI TCGA 4 cut(s) 41, 92, 189, 726
TasI AATT 5 cut(s) 559, 577, 639, 1219, 1311
TatI WGTACW 2 cut(s) 1208, 1257
TauI GCSGC 3 cut(s) 201, 462, 699
TfiI GAWTC 1 cut(s) 723
Tru1I TTAA 5 cut(s) 50, 492, 636, 1065, 1307
Tru9I TTAA 5 cut(s) 50, 492, 636, 1065, 1307
TscAI CASTG 2 cut(s) 874, 1082
TseFI GTSAC 1 cut(s) 865
TseI GCWGC 7 cut(s) 260, 320, 434, 830, 833, 896, 1044
Tsp45I GTSAC 1 cut(s) 865
TspDTI ATGAA 3 cut(s) 419, 861, 971
TspGWI ACGGA 1 cut(s) 50
TspRI CASTG 2 cut(s) 874, 1082
Van91I CCANNNNNTGG 1 cut(s) 1001
VneI GTGCAC 1 cut(s) 739
VpaK11BI GGWCC 2 cut(s) 125, 992
XapI RAATTY 4 cut(s) 559, 577, 1219, 1311
XceI RCATGY 1 cut(s) 757
XcmI CCANNNNNNNNNTGG 2 cut(s) 271, 369
XmnI GAANNNNTTC 1 cut(s) 1017
XspI CTAG 2 cut(s) 921, 1188
ZraI GACGTC 1 cut(s) 96
ZrmI AGTACT 1 cut(s) 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.