Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000248.1

Orthogroup ID

OG0003338

Physical Location & Seq

Genomic Coordinates Forward (+)

22768 .. 26735

Gene Structure 3968 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000248.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

atgtacgtcttttcacggcgagtaaccgccggatcgacgcagttaacggcgttccgttacgccactacttgctggaggaactattcgacgtcgtttcgcgaggaaagggacacctttggacccattctcgtcccctcagacaaactatggggagctcaaactcagagatcgttgcagaacttcgatatcggcggcgaccgcgaacgaatgccggagcctattattcgcgccttcggtgtcctcaagaaatgtgctgccaaggtgaacatggagtatggtcttgaccaatctatagggaaagctataatgcaggctgcacaggaagtggccgaggggaagctaaatcagcactttccacttgttgtgtggcaaactggtagtggaacacaaagcaacatgaatgccaatgaggtcattgcaaacagagcagctgagatacttggacataagcgcggcgagaagtttgtgcatccgaatgaccatgttaatagatcacagtcgtctaatgacactttcccaaccgtcatgcacattgcaactgcgatggaagtaaattcaagactggtaccaaatttgaaaacattgcattcttctctacaacaaaagtcggatgagttcaaagatattgttaaaattggacgcactcacacacaagatgcaacacctttgactcttgggcaagagtttagcggctattctacacaggtgaagtatggaattgagcgagtcttgtgcactctaccccacatgtatcagctggcacagggtggtactgctgttgggactggattgaatacaaagaagggatttgatgtaaagatagctgcagcagtagctgatgaaacaaatttaccatttgtcactgcagaaaacaagtttgaagctttggctgcacatgatgcttttgtggaaactagtggagccctgaatacagttgctacttctctgatgaaaatagctaatgacatacgtttgttaggaagtggtccacgatgtggtcttggtgaactcattcttcctgaaaatgagcctggaagcagcattatgccggggaaggttaacccaacccagtgtgaggctatcacaatggtgtgtgctcaggttatgggtaacaatgtggccattacagtaggtggatctaatggtcattttgaactaaatgtattcaagccaatgattgctagtgctctcctacattctgttagattacttggggatgcatctgcttcctttgaaaagaactgtgtcagaggaattgaagccaacagggaaagaatctcaaagttacttcatgagtcactgatgttggtcacgtccttgaatcctaaaattggttatgacaatgctgcggcagttgcaaagaaagcccacaaggaaggatccactttgaaggatgctgcattaaaacttggggtgctaacgagtgaagagtttgataatcttgtggtgcccgagaagatgattggcccgtctgactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004333 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0006106 GO:0006108 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009060 GO:0009266 GO:0009409 GO:0009628 GO:0009631 GO:0009651 GO:0009856 GO:0009987 GO:0010109 GO:0015980 GO:0016829 GO:0016835 GO:0016836 GO:0016999 GO:0017144 GO:0019222 GO:0019752 GO:0022414 GO:0031323 GO:0032501 GO:0032502 GO:0042126 GO:0042128 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045333 GO:0048856 GO:0048868 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0055114 GO:0065007 GO:0071704 GO:0071941 GO:0072350 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00020 ko00620 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko04934 ko05200 ko05211 map00020 map00620 map00720 map01100 map01110 map01120 map01130 map01200 map04934 map05200 map05211

Pfam Domains

Protein Families

FumaraseC_C Lyase_1

Protein Analysis

492

Amino Acids

53.42

Weight (kDa)

7.66

Isoelectric Point (pI)

30.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003338)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47510 AT2G47510 AT2G47510 AT5G50950 AT5G50950 AT5G50950 AT5G50950
fragaria_vesca	FvH4_2g26121 FvH4_2g26121 FvH4_2g26140 FvH4_2g26140
malus_domestica	MD00G1140200.v1.1 MD03G1292300.v1.1
prunus_persica	Prupe.8G265300_v2.0.a1 Prupe.8G265300_v2.0.a1 Prupe.8G265300_v2.0.a1
pyrus_communis	pycom03g23150 pycom11g27280
rosa_chinensis	RchiOBHm_Chr6g0294511 RchiOBHm_Chr6g0294521
rosa_laevigata	RLG00000011863
rosa_multiflora	Rmu_ssc0000248.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173260 Rroxscaffold_7G00173270
rosa_rugosa	Rorug06G0245500 Rorug06G0245500
rosa_samantha	Rh6AG357800 Rh6AG357900 Rh6BG364700 Rh6BG364800 Rh6CG371800 Rh6CG371900 Rh6DG358600 Rh6DG358700
rosa_wichuraiana	Rw6G031210 Rw6G031220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	92
Acc65I	GGTACC	1 cut(s)	565
AccB1I	GGYRCC	2 cut(s)	565, 1447
AccB7I	CCANNNNNTGG	1 cut(s)	995
AccII	CGCG	4 cut(s)	99, 201, 228, 453
AciI	CCGC	6 cut(s)	27, 192, 199, 453, 690, 1349
AclWI	GGATC	4 cut(s)	40, 1144, 1374, 1387
AcoI	YGGCCR	2 cut(s)	327, 1119
AcsI	RAATTY	3 cut(s)	553, 571, 847
AcyI	GRCGYC	1 cut(s)	89
AdeI	CACNNNGTG	2 cut(s)	767, 995
AfaI	GTAC	3 cut(s)	5, 567, 772
AfiI	CCNNNNNNNGG	3 cut(s)	995, 1075, 1331
AflIII	ACRYGT	1 cut(s)	747
AhlI	ACTAGT	1 cut(s)	914
AjiI	CACGTC	1 cut(s)	1314
AjnI	CCWGG	1 cut(s)	1030
AleI	CACNNNNGTG	1 cut(s)	1088
AluBI	AGCT	9 cut(s)	155, 302, 340, 431, 757, 824, 836, 884, 959
AluI	AGCT	9 cut(s)	155, 302, 340, 431, 757, 824, 836, 884, 959
Alw21I	GWGCWC	4 cut(s)	157, 737, 1099, 1189
Alw44I	GTGCAC	1 cut(s)	733
AlwI	GGATC	4 cut(s)	40, 1144, 1374, 1387
AlwNI	CAGNNNCTG	1 cut(s)	836
Ama87I	CYCGRG	1 cut(s)	1451
AoxI	GGCC	3 cut(s)	327, 1119, 1465
ApaLI	GTGCAC	1 cut(s)	733
ApeKI	GCWGC	9 cut(s)	254, 314, 428, 824, 827, 890, 1038, 1346, 1397
ApoI	RAATTY	3 cut(s)	553, 571, 847
Asp700I	GAANNNNTTC	1 cut(s)	1011
Asp718I	GGTACC	1 cut(s)	565
AspLEI	GCGC	2 cut(s)	230, 453
AspS9I	GGNCC	3 cut(s)	119, 986, 1466
AsuC2I	CCSGG	1 cut(s)	1050
AsuHPI	GGTGA	3 cut(s)	274, 718, 1016
AvaI	CYCGRG	1 cut(s)	1451
AvaII	GGWCC	2 cut(s)	119, 986
BaeGI	GKGCMC	2 cut(s)	737, 1452
BaeI	ACNNNNGTAYC	2 cut(s)	762, 795
BalI	TGGCCA	1 cut(s)	1121
BamHI	GGATCC	1 cut(s)	1379
BanI	GGYRCC	2 cut(s)	565, 1447
BanII	GRGCYC	2 cut(s)	157, 925
Bbv12I	GWGCWC	4 cut(s)	157, 737, 1099, 1189
BbvI	GCAGC	9 cut(s)	241, 301, 440, 811, 839, 877, 1050, 1333, 1384
BccI	CCATC	1 cut(s)	538
BceAI	ACGGC	2 cut(s)	32, 63
BcgI	CGANNNNNNTGC	2 cut(s)	714, 748
BciT130I	CCWGG	1 cut(s)	1032
BcnI	CCSGG	1 cut(s)	1050
BcuI	ACTAGT	1 cut(s)	914
BfaI	CTAG	2 cut(s)	915, 1182
BfmI	CTRYAG	3 cut(s)	291, 825, 864
Bme1390I	CCNGG	2 cut(s)	1032, 1050
Bme18I	GGWCC	2 cut(s)	119, 986
BmeT110I	CYCGRG	1 cut(s)	1451
BmgBI	CACGTC	1 cut(s)	1314
BmgT120I	GGNCC	3 cut(s)	119, 986, 1466
BmiI	GGNNCC	6 cut(s)	121, 216, 567, 922, 1381, 1449
BmrFI	CCNGG	2 cut(s)	1032, 1050
BmrI	ACTGGG	1 cut(s)	1063
BmsI	GCATC	6 cut(s)	478, 646, 889, 1207, 1229, 1384
BmuI	ACTGGG	1 cut(s)	1063
BpmI	CTGGAG	1 cut(s)	94
Bpu10I	CCTNAGC	1 cut(s)	1098
BpuEI	CTTGAG	1 cut(s)	227
BpuMI	CCSGG	1 cut(s)	1050
BsaHI	GRCGYC	1 cut(s)	89
BsaJI	CCNNGG	3 cut(s)	258, 330, 1049
Bsc4I	CCNNNNNNNGG	3 cut(s)	995, 1075, 1331
Bse1I	ACTGG	4 cut(s)	379, 567, 790, 1069
Bse3DI	GCAATG	3 cut(s)	414, 531, 581
BseBI	CCWGG	1 cut(s)	1032
BseDI	CCNNGG	3 cut(s)	258, 330, 1049
BseGI	GGATG	4 cut(s)	469, 616, 1222, 1399
BseLI	CCNNNNNNNGG	3 cut(s)	995, 1075, 1331
BseMI	GCAATG	3 cut(s)	414, 531, 581
BseMII	CTCAG	4 cut(s)	150, 176, 423, 1112
BseNI	ACTGG	4 cut(s)	379, 567, 790, 1069
BseSI	GKGCMC	2 cut(s)	737, 1452
BseXI	GCAGC	9 cut(s)	241, 301, 440, 811, 839, 877, 1050, 1333, 1384
BsgI	GTGCAG	2 cut(s)	300, 876
Bsh1236I	CGCG	4 cut(s)	99, 201, 228, 453
Bsh1285I	CGRYCG	1 cut(s)	199
BshFI	GGCC	3 cut(s)	329, 1121, 1467
BshNI	GGYRCC	2 cut(s)	565, 1447
BsiEI	CGRYCG	1 cut(s)	199
BsiHKAI	GWGCWC	4 cut(s)	157, 737, 1099, 1189
BsiHKCI	CYCGRG	1 cut(s)	1451
BsiSI	CCGG	3 cut(s)	30, 212, 1049
BslFI	GGGAC	3 cut(s)	116, 122, 796
BslI	CCNNNNNNNGG	3 cut(s)	995, 1075, 1331
BsmFI	GGGAC	3 cut(s)	116, 122, 796
BsmI	GAATGC	3 cut(s)	213, 406, 586
BsnI	GGCC	3 cut(s)	329, 1121, 1467
BsoBI	CYCGRG	1 cut(s)	1451
Bsp1286I	GDGCHC	6 cut(s)	157, 737, 925, 1099, 1189, 1452
Bsp143I	GATC	5 cut(s)	32, 167, 491, 1136, 1379
Bsp68I	TCGCGA	1 cut(s)	99
BspACI	CCGC	6 cut(s)	27, 192, 199, 453, 690, 1349
BspANI	GGCC	3 cut(s)	329, 1121, 1467
BspCNI	CTCAG	4 cut(s)	149, 175, 424, 1111
BspFNI	CGCG	4 cut(s)	99, 201, 228, 453
BspHI	TCATGA	1 cut(s)	1291
BspLI	GGNNCC	6 cut(s)	121, 216, 567, 922, 1381, 1449
BspMAI	CTGCAG	2 cut(s)	829, 868
BspPI	GGATC	4 cut(s)	40, 1144, 1374, 1387
BspT107I	GGYRCC	2 cut(s)	565, 1447
BsrDI	GCAATG	3 cut(s)	414, 531, 581
BsrI	ACTGG	4 cut(s)	379, 567, 790, 1069
BssECI	CCNNGG	3 cut(s)	258, 330, 1049
BssMI	GATC	5 cut(s)	32, 167, 491, 1136, 1379
BssNI	GRCGYC	1 cut(s)	89
BssT1I	CCWWGG	1 cut(s)	258
Bst2UI	CCWGG	1 cut(s)	1032
Bst4CI	ACNGT	5 cut(s)	498, 523, 934, 1129, 1244
Bst6I	CTCTTC	1 cut(s)	1422
BstACI	GRCGYC	1 cut(s)	89
BstAPI	GCANNNNNTGC	1 cut(s)	899
BstC8I	GCNNGC	2 cut(s)	312, 759
BstDEI	CTNAG	4 cut(s)	136, 162, 432, 1098
BstF5I	GGATG	4 cut(s)	469, 616, 1222, 1399
BstFNI	CGCG	4 cut(s)	99, 201, 228, 453
BstHHI	GCGC	2 cut(s)	230, 453
BstKTI	GATC	5 cut(s)	35, 170, 494, 1139, 1382
BstMBI	GATC	5 cut(s)	32, 167, 491, 1136, 1379
BstMCI	CGRYCG	1 cut(s)	199
BstMWI	GCNNNNNNNGC	8 cut(s)	198, 346, 425, 833, 890, 899, 1355, 1364
BstNI	CCWGG	1 cut(s)	1032
BstNSI	RCATGY	1 cut(s)	751
BstSCI	CCNGG	2 cut(s)	1030, 1048
BstSFI	CTRYAG	3 cut(s)	291, 825, 864
BstSLI	GKGCMC	2 cut(s)	737, 1452
BstUI	CGCG	4 cut(s)	99, 201, 228, 453
BstV1I	GCAGC	9 cut(s)	241, 301, 440, 811, 839, 877, 1050, 1333, 1384
BstX2I	RGATCY	2 cut(s)	1136, 1379
BstYI	RGATCY	2 cut(s)	1136, 1379
BsuRI	GGCC	3 cut(s)	329, 1121, 1467
BtgZI	GCGATG	1 cut(s)	557
BtrI	CACGTC	1 cut(s)	1314
BtsCI	GGATG	4 cut(s)	469, 616, 1222, 1399
BtsI	GCAGTG	1 cut(s)	861
BtsIMutI	CAGTG	3 cut(s)	861, 1076, 1298
BtuMI	TCGCGA	1 cut(s)	99
Cac8I	GCNNGC	2 cut(s)	312, 759
CaiI	CAGNNNCTG	1 cut(s)	836
CciI	TCATGA	1 cut(s)	1291
CfoI	GCGC	2 cut(s)	230, 453
Cfr13I	GGNCC	3 cut(s)	119, 986, 1466
CseI	GACGC	2 cut(s)	46, 648
Csp6I	GTAC	3 cut(s)	4, 566, 771
CviAII	CATG	7 cut(s)	268, 397, 482, 526, 748, 896, 1292
CviQI	GTAC	3 cut(s)	4, 566, 771
DdeI	CTNAG	4 cut(s)	136, 162, 432, 1098
DpnI	GATC	5 cut(s)	34, 169, 493, 1138, 1381
DpnII	GATC	5 cut(s)	32, 167, 491, 1136, 1379
DraIII	CACNNNGTG	2 cut(s)	767, 995
EaeI	YGGCCR	2 cut(s)	327, 1119
Eam1104I	CTCTTC	1 cut(s)	1422
EarI	CTCTTC	1 cut(s)	1422
Ecl136II	GAGCTC	1 cut(s)	155
Eco130I	CCWWGG	1 cut(s)	258
Eco24I	GRGCYC	2 cut(s)	157, 925
Eco32I	GATATC	1 cut(s)	187
Eco47I	GGWCC	2 cut(s)	119, 986
Eco53kI	GAGCTC	1 cut(s)	155
Eco88I	CYCGRG	1 cut(s)	1451
EcoICRI	GAGCTC	1 cut(s)	155
EcoRII	CCWGG	1 cut(s)	1030
EcoRV	GATATC	1 cut(s)	187
EcoT14I	CCWWGG	1 cut(s)	258
EcoT22I	ATGCAT	1 cut(s)	1222
EcoT38I	GRGCYC	2 cut(s)	157, 925
ErhI	CCWWGG	1 cut(s)	258
FaeI	CATG	7 cut(s)	271, 400, 485, 529, 751, 899, 1295
FaqI	GGGAC	3 cut(s)	116, 122, 796
FatI	CATG	7 cut(s)	267, 396, 481, 525, 747, 895, 1291
FokI	GGATG	4 cut(s)	456, 623, 1229, 1406
FriOI	GRGCYC	2 cut(s)	157, 925
FspBI	CTAG	2 cut(s)	915, 1182
GlaI	GCGC	2 cut(s)	229, 452
GsuI	CTGGAG	1 cut(s)	94
HaeIII	GGCC	3 cut(s)	329, 1121, 1467
HapII	CCGG	3 cut(s)	30, 212, 1049
HgaI	GACGC	2 cut(s)	46, 648
HhaI	GCGC	2 cut(s)	230, 453
Hin1I	GRCGYC	1 cut(s)	89
Hin1II	CATG	7 cut(s)	271, 400, 485, 529, 751, 899, 1295
Hin6I	GCGC	2 cut(s)	228, 451
HinP1I	GCGC	2 cut(s)	228, 451
HincII	GTYRAC	2 cut(s)	45, 1060
HindII	GTYRAC	2 cut(s)	45, 1060
HindIII	AAGCTT	1 cut(s)	882
HinfI	GANTC	5 cut(s)	670, 726, 1275, 1295, 1321
HpaI	GTTAAC	2 cut(s)	45, 1060
HpaII	CCGG	3 cut(s)	30, 212, 1049
HphI	GGTGA	3 cut(s)	274, 718, 1016
Hpy166II	GTNNAC	6 cut(s)	45, 265, 735, 989, 1007, 1060
Hpy188I	TCNGA	7 cut(s)	139, 165, 474, 610, 948, 1250, 1474
Hpy188III	TCNNGA	6 cut(s)	98, 244, 281, 558, 1019, 1292
Hpy8I	GTNNAC	6 cut(s)	45, 265, 735, 989, 1007, 1060
Hpy99I	CGWCG	3 cut(s)	40, 91, 94
HpyAV	CCTTC	5 cut(s)	241, 796, 1048, 1370, 1384
HpyCH4III	ACNGT	5 cut(s)	498, 523, 934, 1129, 1244
HpyCH4IV	ACGT	4 cut(s)	6, 89, 970, 1313
HpyF10VI	GCNNNNNNNGC	8 cut(s)	198, 346, 425, 833, 890, 899, 1355, 1364
HpyF3I	CTNAG	4 cut(s)	136, 162, 432, 1098
HpySE526I	ACGT	4 cut(s)	6, 89, 970, 1313
Hsp92I	GRCGYC	1 cut(s)	89
Hsp92II	CATG	7 cut(s)	271, 400, 485, 529, 751, 899, 1295
HspAI	GCGC	2 cut(s)	228, 451
KpnI	GGTACC	1 cut(s)	569
KspAI	GTTAAC	2 cut(s)	45, 1060
Kzo9I	GATC	5 cut(s)	32, 167, 491, 1136, 1379
LmnI	GCTCC	3 cut(s)	152, 214, 920
Lsp1109I	GCAGC	9 cut(s)	241, 301, 440, 811, 839, 877, 1050, 1333, 1384
LweI	GCATC	6 cut(s)	478, 646, 889, 1207, 1229, 1384
MaeI	CTAG	2 cut(s)	915, 1182
MaeII	ACGT	4 cut(s)	6, 89, 970, 1313
MaeIII	GTNAC	7 cut(s)	22, 56, 859, 1109, 1284, 1296, 1309
MalI	GATC	5 cut(s)	34, 169, 493, 1138, 1381
MboI	GATC	5 cut(s)	32, 167, 491, 1136, 1379
MboII	GAAGA	4 cut(s)	582, 1007, 1439, 1468
MflI	RGATCY	2 cut(s)	1136, 1379
MhlI	GDGCHC	6 cut(s)	157, 737, 925, 1099, 1189, 1452
MlsI	TGGCCA	1 cut(s)	1121
MluCI	AATT	7 cut(s)	553, 571, 633, 717, 847, 1254, 1329
MluNI	TGGCCA	1 cut(s)	1121
MlyI	GAGTC	3 cut(s)	664, 735, 1304
MmeI	TCCRAC	1 cut(s)	588
MnlI	CCTC	8 cut(s)	69, 94, 145, 251, 325, 403, 1069, 1244
Mox20I	TGGCCA	1 cut(s)	1121
Mph1103I	ATGCAT	1 cut(s)	1222
MroXI	GAANNNNTTC	1 cut(s)	1011
MscI	TGGCCA	1 cut(s)	1121
MseI	TTAA	5 cut(s)	44, 486, 630, 1059, 1403
MslI	CAYNNNNRTG	2 cut(s)	474, 1088
Msp20I	TGGCCA	1 cut(s)	1121
MspA1I	CMGCKG	2 cut(s)	431, 757
MspI	CCGG	3 cut(s)	30, 212, 1049
MspR9I	CCNGG	2 cut(s)	1032, 1050
Mva1269I	GAATGC	3 cut(s)	213, 406, 586
MvaI	CCWGG	1 cut(s)	1032
MvnI	CGCG	4 cut(s)	99, 201, 228, 453
MwoI	GCNNNNNNNGC	8 cut(s)	198, 346, 425, 833, 890, 899, 1355, 1364
NciI	CCSGG	1 cut(s)	1050
NdeII	GATC	5 cut(s)	32, 167, 491, 1136, 1379
NlaIII	CATG	7 cut(s)	271, 400, 485, 529, 751, 899, 1295
NlaIV	GGNNCC	6 cut(s)	121, 216, 567, 922, 1381, 1449
NmeAIII	GCCGAG	1 cut(s)	355
NmuCI	GTSAC	3 cut(s)	859, 1296, 1309
NruI	TCGCGA	1 cut(s)	99
NsiI	ATGCAT	1 cut(s)	1222
NspI	RCATGY	1 cut(s)	751
OliI	CACNNNNGTG	1 cut(s)	1088
PagI	TCATGA	1 cut(s)	1291
PciI	ACATGT	1 cut(s)	747
PctI	GAATGC	3 cut(s)	213, 406, 586
PdmI	GAANNNNTTC	1 cut(s)	1011
PfeI	GAWTC	2 cut(s)	1275, 1321
PflMI	CCANNNNNTGG	1 cut(s)	995
PleI	GAGTC	3 cut(s)	664, 734, 1303
PpsI	GAGTC	3 cut(s)	664, 734, 1303
PscI	ACATGT	1 cut(s)	747
Psp124BI	GAGCTC	1 cut(s)	157
Psp6I	CCWGG	1 cut(s)	1030
PspGI	CCWGG	1 cut(s)	1030
PspN4I	GGNNCC	6 cut(s)	121, 216, 567, 922, 1381, 1449
PspPI	GGNCC	3 cut(s)	119, 986, 1466
PstI	CTGCAG	2 cut(s)	829, 868
PstNI	CAGNNNCTG	1 cut(s)	836
PsuI	RGATCY	2 cut(s)	1136, 1379
PvuII	CAGCTG	2 cut(s)	431, 757
RruI	TCGCGA	1 cut(s)	99
RsaI	GTAC	3 cut(s)	5, 567, 772
RsaNI	GTAC	3 cut(s)	4, 566, 771
RseI	CAYNNNNRTG	2 cut(s)	474, 1088
SacI	GAGCTC	1 cut(s)	157
SaqAI	TTAA	5 cut(s)	44, 486, 630, 1059, 1403
Sau3AI	GATC	5 cut(s)	32, 167, 491, 1136, 1379
Sau96I	GGNCC	3 cut(s)	119, 986, 1466
SchI	GAGTC	3 cut(s)	664, 735, 1304
ScrFI	CCNGG	2 cut(s)	1032, 1050
SduI	GDGCHC	6 cut(s)	157, 737, 925, 1099, 1189, 1452
SfaNI	GCATC	6 cut(s)	478, 646, 889, 1207, 1229, 1384
SfcI	CTRYAG	3 cut(s)	291, 825, 864
SinI	GGWCC	2 cut(s)	119, 986
SmiMI	CAYNNNNRTG	2 cut(s)	474, 1088
SmlI	CTYRAG	1 cut(s)	242
SmoI	CTYRAG	1 cut(s)	242
SpeI	ACTAGT	1 cut(s)	914
Sse9I	AATT	7 cut(s)	553, 571, 633, 717, 847, 1254, 1329
SsiI	CCGC	6 cut(s)	27, 192, 199, 453, 690, 1349
SspMI	CTAG	2 cut(s)	915, 1182
SstI	GAGCTC	1 cut(s)	157
StyD4I	CCNGG	2 cut(s)	1030, 1048
StyI	CCWWGG	1 cut(s)	258
TaaI	ACNGT	5 cut(s)	498, 523, 934, 1129, 1244
TaiI	ACGT	4 cut(s)	9, 92, 973, 1316
TaqI	TCGA	3 cut(s)	35, 86, 183
TasI	AATT	7 cut(s)	553, 571, 633, 717, 847, 1254, 1329
TauI	GCSGC	4 cut(s)	195, 456, 693, 1352
TfiI	GAWTC	2 cut(s)	1275, 1321
Tru1I	TTAA	5 cut(s)	44, 486, 630, 1059, 1403
Tru9I	TTAA	5 cut(s)	44, 486, 630, 1059, 1403
TscAI	CASTG	3 cut(s)	868, 1076, 1305
TseFI	GTSAC	3 cut(s)	859, 1296, 1309
TseI	GCWGC	9 cut(s)	254, 314, 428, 824, 827, 890, 1038, 1346, 1397
Tsp45I	GTSAC	3 cut(s)	859, 1296, 1309
TspDTI	ATGAA	4 cut(s)	413, 855, 965, 1280
TspGWI	ACGGA	1 cut(s)	44
TspRI	CASTG	3 cut(s)	868, 1076, 1305
Van91I	CCANNNNNTGG	1 cut(s)	995
VneI	GTGCAC	1 cut(s)	733
VpaK11BI	GGWCC	2 cut(s)	119, 986
XapI	RAATTY	3 cut(s)	553, 571, 847
XceI	RCATGY	1 cut(s)	751
XcmI	CCANNNNNNNNNTGG	2 cut(s)	265, 363
XmnI	GAANNNNTTC	1 cut(s)	1011
XspI	CTAG	2 cut(s)	915, 1182
ZraI	GACGTC	1 cut(s)	90
Zsp2I	ATGCAT	1 cut(s)	1222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.