MD01G1011700.v1.1

Amino acid kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0014351
Physical Location & Seq
Forward (+)
6208157 .. 6211117
2961 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1011700.v1.1.491

Sequence Viewer

Length: 999 bp
ATGGCGGCAATTTCGCCCTCCTCCTTTGTCTCTGTCTCCTCTTCCACCTCCTCCTCTTCTTTTTCATGTCCGCCTCTGACTTGTTTGAAGCGCGCTTACAATGGTGTGCCGGTGAGTAAACAGCCTCCACGTGGGCGGTTGGCGGCGGTTACCTGCTCATCTTCTGAAATGGGCTCCGGTTCCGACTCCGTGAATCACCGCAGTCATACTCAAATATCATCTATGGCTCCCTTTGGGGTGACAATGAATGGGAATGGCTCGTCTGGACCATCTTATAAGTGGCGAAGGGTTTTGCTTAAAGTTAGCGGAGAGGCACTTGCCGGAGATCATACACAGACTATTGACCCAAAGGTAACAATGGAAATTGCAAGGGAGGTTGCATCTGTGACTCGCCTTGGCATTGAGGTTGCAATTGTAGTTGGCGGGGGAAATATCTTCCGTGGATCTTCCTGGGTGGGAAGCGGCGGTCTTGACCAATCATCTGCTGATTACATCGGGATGTTGGCAACTGTCATGAACTCAATATTTCTTCAAGCAACAATGGAAAGTATCAACATCCCTACTCGAGTGCAGACTGCCTTTCGAATGTCTGAGGTTGCAGAGCCTTATATACGTCGAAGAGCTATAAGGCATTTGGAAAAGGGGAGAGTAGTAATCTTTGCGGCTGGAACTGGAAATCCGTTCTTCACCACTGATACTGCTGCAGCGCTTCGTGGTGCAGAAATCAATGCAGAGGTAGTGTTGAAAGCTACAAATGTTGACGGGGTTTATGACAACGATCCAAGGTGTGACCCGAATGCCCGTCTTCTTGAGAATTTAACATATCAAGAGGTGATGGCGAAAGATCTTTTGGTGATGGACATGACCGCCATTACCTTATGCCAGACAAACAAAATTCCTGTTGTTGTGTTCAATCTGAACAAACCTGGTAACATCTCAAAAGCCATAAAGGGGGAGAAGGTTGGCACCTTAATTTATAAGGAGGATGCTTACCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00240 ko01100 map00240 map01100
Pfam Domains
Protein Families
AA_kinase

Protein Analysis

333

Amino Acids

35.52

Weight (kDa)

9.07

Isoelectric Point (pI)

40.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 96 - 305 8.6e-36 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014351)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18680 AT3G18680
fragaria_vesca FvH4_1g24030
malus_domestica MD01G1011700.v1.1 MD15G1338200.v1.1
prunus_persica Prupe.6G157900_v2.0.a1 Prupe.6G157900_v2.0.a1
pyrus_communis pycom15g28830
rosa_chinensis RchiOBHm_Chr2g0120171
rosa_laevigata RLG00000018528
rosa_multiflora Rmu_sc0015469.1_g000003
rosa_roxburghii Rroxscaffold_2G00123650
rosa_rugosa Rorug02G0227300 Rorug02G0227400
rosa_samantha Rh2AG284000 Rh2DG309000
rosa_wichuraiana Rw2G022750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 276, 978
Acc36I ACCTGC 1 cut(s) 161
AccB1I GGYRCC 1 cut(s) 965
AccII CGCG 1 cut(s) 93
AclWI GGATC 2 cut(s) 451, 773
AcsI RAATTY 2 cut(s) 814, 894
AcvI CACGTG 1 cut(s) 131
AfeI AGCGCT 1 cut(s) 708
AfiI CCNNNNNNNGG 2 cut(s) 131, 951
AgsI TTSAA 4 cut(s) 88, 533, 745, 913
AjnI CCWGG 2 cut(s) 449, 925
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
AloI GAACNNNNNNTCC 2 cut(s) 661, 693
AluBI AGCT 2 cut(s) 623, 749
AluI AGCT 2 cut(s) 623, 749
Alw26I GTCTC 2 cut(s) 34, 40
AlwI GGATC 2 cut(s) 451, 773
Ama87I CYCGRG 1 cut(s) 564
Aor51HI AGCGCT 1 cut(s) 708
ApeKI GCWGC 2 cut(s) 701, 704
ApoI RAATTY 2 cut(s) 814, 894
AspLEI GCGC 3 cut(s) 93, 95, 709
AspS9I GGNCC 1 cut(s) 266
AsuHPI GGTGA 6 cut(s) 124, 188, 250, 679, 844, 865
AsuII TTCGAA 1 cut(s) 583
AvaI CYCGRG 1 cut(s) 564
AvaII GGWCC 1 cut(s) 266
BanI GGYRCC 1 cut(s) 965
BanII GRGCYC 1 cut(s) 176
BarI GAAGNNNNNNTAC 2 cut(s) 80, 112
BbrPI CACGTG 1 cut(s) 131
BbsI GAAGAC 1 cut(s) 797
BbvI GCAGC 2 cut(s) 688, 716
BccI CCATC 3 cut(s) 277, 829, 850
BciT130I CCWGG 2 cut(s) 451, 927
BcoDI GTCTC 2 cut(s) 34, 40
BfmI CTRYAG 1 cut(s) 702
BfoI RGCGCY 1 cut(s) 710
BfuAI ACCTGC 1 cut(s) 161
BglII AGATCT 1 cut(s) 844
BisI GCNGC 6 cut(s) 6, 144, 463, 663, 702, 705
BlsI GCNGC 6 cut(s) 7, 145, 464, 664, 703, 706
Bme1390I CCNGG 2 cut(s) 451, 927
Bme18I GGWCC 1 cut(s) 266
BmeT110I CYCGRG 1 cut(s) 564
BmgT120I GGNCC 1 cut(s) 266
BmiI GGNNCC 4 cut(s) 175, 181, 228, 967
BmrFI CCNGG 2 cut(s) 451, 927
BmsI GCATC 2 cut(s) 389, 976
BpiI GAAGAC 1 cut(s) 797
Bpu14I TTCGAA 1 cut(s) 583
BpuEI CTTGAG 1 cut(s) 830
BsaAI YACGTR 1 cut(s) 131
BsaJI CCNNGG 4 cut(s) 394, 439, 450, 782
BsaWI WCCGGW 1 cut(s) 176
Bsc4I CCNNNNNNNGG 2 cut(s) 131, 951
Bse118I RCCGGY 1 cut(s) 109
Bse1I ACTGG 1 cut(s) 676
BseBI CCWGG 2 cut(s) 451, 927
BseDI CCNNGG 4 cut(s) 394, 439, 450, 782
BseGI GGATG 3 cut(s) 504, 555, 991
BseLI CCNNNNNNNGG 2 cut(s) 131, 951
BseMII CTCAG 1 cut(s) 582
BseNI ACTGG 1 cut(s) 676
BsePI GCGCGC 1 cut(s) 91
BseRI GAGGAG 4 cut(s) 10, 28, 40, 43
BseXI GCAGC 2 cut(s) 688, 716
BsgI GTGCAG 2 cut(s) 590, 738
Bsh1236I CGCG 1 cut(s) 93
BshNI GGYRCC 1 cut(s) 965
BsiHKCI CYCGRG 1 cut(s) 564
BsiSI CCGG 3 cut(s) 110, 177, 321
BslI CCNNNNNNNGG 2 cut(s) 131, 951
BsmAI GTCTC 2 cut(s) 34, 40
BsmI GAATGC 1 cut(s) 802
BsoBI CYCGRG 1 cut(s) 564
Bsp119I TTCGAA 1 cut(s) 583
Bsp1286I GDGCHC 1 cut(s) 176
Bsp143I GATC 4 cut(s) 325, 443, 778, 844
BspCNI CTCAG 1 cut(s) 583
BspFNI CGCG 1 cut(s) 93
BspHI TCATGA 1 cut(s) 513
BspLI GGNNCC 4 cut(s) 175, 181, 228, 967
BspMAI CTGCAG 1 cut(s) 706
BspMI ACCTGC 1 cut(s) 161
BspPI GGATC 2 cut(s) 451, 773
BspQI GCTCTTC 1 cut(s) 613
BspT104I TTCGAA 1 cut(s) 583
BspT107I GGYRCC 1 cut(s) 965
BsrFI RCCGGY 1 cut(s) 109
BsrI ACTGG 1 cut(s) 676
BssAI RCCGGY 1 cut(s) 109
BssECI CCNNGG 4 cut(s) 394, 439, 450, 782
BssHII GCGCGC 1 cut(s) 91
BssMI GATC 4 cut(s) 325, 443, 778, 844
BssT1I CCWWGG 2 cut(s) 394, 782
Bst2UI CCWGG 2 cut(s) 451, 927
Bst4CI ACNGT 1 cut(s) 511
Bst6I CTCTTC 3 cut(s) 46, 61, 613
BstBAI YACGTR 1 cut(s) 131
BstBI TTCGAA 1 cut(s) 583
BstC8I GCNNGC 1 cut(s) 93
BstDEI CTNAG 1 cut(s) 591
BstDSI CCRYGG 1 cut(s) 439
BstEII GGTNACC 1 cut(s) 148
BstF5I GGATG 3 cut(s) 504, 555, 991
BstFNI CGCG 1 cut(s) 93
BstH2I RGCGCY 1 cut(s) 710
BstHHI GCGC 3 cut(s) 93, 95, 709
BstKTI GATC 4 cut(s) 328, 446, 781, 847
BstMAI GTCTC 2 cut(s) 34, 40
BstMBI GATC 4 cut(s) 325, 443, 778, 844
BstNI CCWGG 2 cut(s) 451, 927
BstPI GGTNACC 1 cut(s) 148
BstSCI CCNGG 2 cut(s) 449, 925
BstSFI CTRYAG 1 cut(s) 702
BstUI CGCG 1 cut(s) 93
BstV1I GCAGC 2 cut(s) 688, 716
BstV2I GAAGAC 1 cut(s) 797
BstX2I RGATCY 2 cut(s) 443, 844
BstYI RGATCY 2 cut(s) 443, 844
BtgI CCRYGG 1 cut(s) 439
BtsCI GGATG 3 cut(s) 504, 555, 991
BtsIMutI CAGTG 1 cut(s) 690
BveI ACCTGC 1 cut(s) 161
Cac8I GCNNGC 1 cut(s) 93
CciI TCATGA 1 cut(s) 513
CfoI GCGC 3 cut(s) 93, 95, 709
Cfr10I RCCGGY 1 cut(s) 109
Cfr13I GGNCC 1 cut(s) 266
CsiI ACCWGGT 1 cut(s) 925
CviAII CATG 3 cut(s) 66, 514, 862
CviJI RGCY 9 cut(s) 124, 174, 227, 258, 604, 623, 665, 749, 944
CviKI_1 RGCY 9 cut(s) 124, 174, 227, 258, 604, 623, 665, 749, 944
DdeI CTNAG 1 cut(s) 591
DpnI GATC 4 cut(s) 327, 445, 780, 846
DpnII GATC 4 cut(s) 325, 443, 778, 844
Eam1104I CTCTTC 3 cut(s) 46, 61, 613
EarI CTCTTC 3 cut(s) 46, 61, 613
EciI GGCGGA 1 cut(s) 60
Eco130I CCWWGG 2 cut(s) 394, 782
Eco24I GRGCYC 1 cut(s) 176
Eco47I GGWCC 1 cut(s) 266
Eco47III AGCGCT 1 cut(s) 708
Eco72I CACGTG 1 cut(s) 131
Eco88I CYCGRG 1 cut(s) 564
Eco91I GGTNACC 1 cut(s) 148
EcoO65I GGTNACC 1 cut(s) 148
EcoRII CCWGG 2 cut(s) 449, 925
EcoT14I CCWWGG 2 cut(s) 394, 782
EcoT38I GRGCYC 1 cut(s) 176
ErhI CCWWGG 2 cut(s) 394, 782
FaeI CATG 3 cut(s) 69, 517, 865
FatI CATG 3 cut(s) 65, 513, 861
FauI CCCGC 1 cut(s) 416
Fnu4HI GCNGC 6 cut(s) 6, 144, 463, 663, 702, 705
FokI GGATG 2 cut(s) 511, 542
FriOI GRGCYC 1 cut(s) 176
Fsp4HI GCNGC 6 cut(s) 6, 144, 463, 663, 702, 705
GlaI GCGC 3 cut(s) 92, 94, 708
GluI GCNGC 6 cut(s) 6, 144, 463, 663, 702, 705
HaeII RGCGCY 1 cut(s) 710
HapII CCGG 3 cut(s) 110, 177, 321
HhaI GCGC 3 cut(s) 93, 95, 709
Hin1II CATG 3 cut(s) 69, 517, 865
Hin6I GCGC 3 cut(s) 91, 93, 707
HinP1I GCGC 3 cut(s) 91, 93, 707
HincII GTYRAC 1 cut(s) 760
HindII GTYRAC 1 cut(s) 760
HinfI GANTC 3 cut(s) 185, 193, 388
HpaII CCGG 3 cut(s) 110, 177, 321
HphI GGTGA 6 cut(s) 124, 188, 250, 679, 844, 865
Hpy166II GTNNAC 2 cut(s) 119, 760
Hpy188I TCNGA 5 cut(s) 78, 166, 184, 592, 918
Hpy188III TCNNGA 6 cut(s) 264, 470, 496, 514, 809, 827
Hpy8I GTNNAC 2 cut(s) 119, 760
Hpy99I CGWCG 1 cut(s) 618
HpyAV CCTTC 2 cut(s) 279, 952
HpyCH4III ACNGT 1 cut(s) 511
HpyCH4IV ACGT 2 cut(s) 130, 613
HpyCH4V TGCA 8 cut(s) 368, 380, 410, 571, 599, 704, 719, 731
HpyF3I CTNAG 1 cut(s) 591
HpySE526I ACGT 2 cut(s) 130, 613
Hsp92II CATG 3 cut(s) 69, 517, 865
HspAI GCGC 3 cut(s) 91, 93, 707
Kzo9I GATC 4 cut(s) 325, 443, 778, 844
LguI GCTCTTC 1 cut(s) 613
LmnI GCTCC 2 cut(s) 179, 232
Lsp1109I GCAGC 2 cut(s) 688, 716
LweI GCATC 2 cut(s) 389, 976
MabI ACCWGGT 1 cut(s) 925
MaeII ACGT 2 cut(s) 130, 613
MaeIII GTNAC 6 cut(s) 148, 238, 352, 385, 788, 929
MalI GATC 4 cut(s) 327, 445, 780, 846
MboI GATC 4 cut(s) 325, 443, 778, 844
MboII GAAGA 9 cut(s) 33, 48, 153, 427, 438, 521, 630, 676, 797
MfeI CAATTG 1 cut(s) 411
MflI RGATCY 2 cut(s) 443, 844
MhlI GDGCHC 1 cut(s) 176
MluCI AATT 6 cut(s) 9, 363, 411, 814, 894, 972
MlyI GAGTC 2 cut(s) 179, 382
MmeI TCCRAC 1 cut(s) 207
MseI TTAA 3 cut(s) 297, 818, 971
MslI CAYNNNNRTG 1 cut(s) 497
MspA1I CMGCKG 1 cut(s) 996
MspI CCGG 3 cut(s) 110, 177, 321
MspR9I CCNGG 2 cut(s) 451, 927
MunI CAATTG 1 cut(s) 411
Mva1269I GAATGC 1 cut(s) 802
MvaI CCWGG 2 cut(s) 451, 927
MvnI CGCG 1 cut(s) 93
NdeII GATC 4 cut(s) 325, 443, 778, 844
NlaIII CATG 3 cut(s) 69, 517, 865
NlaIV GGNNCC 4 cut(s) 175, 181, 228, 967
NmuCI GTSAC 3 cut(s) 238, 385, 788
NspV TTCGAA 1 cut(s) 583
PaeR7I CTCGAG 1 cut(s) 564
PagI TCATGA 1 cut(s) 513
PauI GCGCGC 1 cut(s) 91
PciSI GCTCTTC 1 cut(s) 613
PctI GAATGC 1 cut(s) 802
PfeI GAWTC 1 cut(s) 193
PkrI GCNGC 6 cut(s) 7, 145, 464, 664, 703, 706
PleI GAGTC 2 cut(s) 179, 382
PmaCI CACGTG 1 cut(s) 131
PmlI CACGTG 1 cut(s) 131
PpsI GAGTC 2 cut(s) 179, 382
Ppu21I YACGTR 1 cut(s) 131
PsiI TTATAA 2 cut(s) 276, 978
Psp6I CCWGG 2 cut(s) 449, 925
PspCI CACGTG 1 cut(s) 131
PspEI GGTNACC 1 cut(s) 148
PspGI CCWGG 2 cut(s) 449, 925
PspN4I GGNNCC 4 cut(s) 175, 181, 228, 967
PspPI GGNCC 1 cut(s) 266
PspXI VCTCGAGB 1 cut(s) 564
PstI CTGCAG 1 cut(s) 706
PsuI RGATCY 2 cut(s) 443, 844
PteI GCGCGC 1 cut(s) 91
RseI CAYNNNNRTG 1 cut(s) 497
SapI GCTCTTC 1 cut(s) 613
SaqAI TTAA 3 cut(s) 297, 818, 971
SatI GCNGC 6 cut(s) 6, 144, 463, 663, 702, 705
Sau3AI GATC 4 cut(s) 325, 443, 778, 844
Sau96I GGNCC 1 cut(s) 266
SchI GAGTC 2 cut(s) 179, 382
ScrFI CCNGG 2 cut(s) 451, 927
SduI GDGCHC 1 cut(s) 176
SexAI ACCWGGT 1 cut(s) 925
SfaNI GCATC 2 cut(s) 389, 976
SfcI CTRYAG 1 cut(s) 702
Sfr274I CTCGAG 1 cut(s) 564
SfuI TTCGAA 1 cut(s) 583
SinI GGWCC 1 cut(s) 266
SlaI CTCGAG 1 cut(s) 564
SmiMI CAYNNNNRTG 1 cut(s) 497
SmlI CTYRAG 2 cut(s) 564, 809
SmoI CTYRAG 2 cut(s) 564, 809
Sse9I AATT 6 cut(s) 9, 363, 411, 814, 894, 972
SspI AATATT 1 cut(s) 525
StyD4I CCNGG 2 cut(s) 449, 925
StyI CCWWGG 2 cut(s) 394, 782
TaaI ACNGT 1 cut(s) 511
TaiI ACGT 2 cut(s) 133, 616
TaqI TCGA 3 cut(s) 565, 583, 616
TasI AATT 6 cut(s) 9, 363, 411, 814, 894, 972
TauI GCSGC 4 cut(s) 8, 146, 465, 665
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 3 cut(s) 297, 818, 971
Tru9I TTAA 3 cut(s) 297, 818, 971
TscAI CASTG 1 cut(s) 697
TseFI GTSAC 3 cut(s) 238, 385, 788
TseI GCWGC 2 cut(s) 701, 704
Tsp45I GTSAC 3 cut(s) 238, 385, 788
TspDTI ATGAA 3 cut(s) 54, 260, 530
TspGWI ACGGA 3 cut(s) 178, 428, 669
TspRI CASTG 1 cut(s) 697
VpaK11BI GGWCC 1 cut(s) 266
XapI RAATTY 2 cut(s) 814, 894
XcmI CCANNNNNNNNNTGG 1 cut(s) 276
XhoI CTCGAG 1 cut(s) 564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.