Rw2G022750

Amino acid kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0014351
Physical Location & Seq
Forward (+)
32610276 .. 32614197
3922 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G022750.1

Sequence Viewer

Length: 996 bp
ATGGCAATCTCCTCCTCCTCCTGCTCTGTTCCTCTTCTATCTCTGAGCACTGTCTCTTCTTCTTCTTCGTTTCCATTTTCTCTGAGTTGTGTGAGGCCTCAGAGCCGGAGAAATCCGCGCTTGGTGGTTAGCTGCTCGTCTTCTGAAACCGACTCCGGCTCTGACTCACTCAATGGAAATGGAAGACATTCCCAAATGTCGTCTATGACTCCTTTTGGGGTGACAATGAATGAAGCTGGGTTGTCCAGACCACCTTATAAATGGCGAAGGGTCTTGCTTAAAGTAAGCGGAGAAGCACTTGCCGGAGATCACACACAGAATATTGACCCAAAGGTAACAATGGAAATTGCAAGGGAGGTTGCATCTGTGACTCGCCTCGGCATTGAGGTTGCCATTGTTGTTGGTGGGGGAAATATATTCCGTGGAGCATCCTGGGCTGGAAGTAGTGGTCTTGACCGTTCATCCGCTGATTATATCGGGATGTTGGCTACTGTAATGAATTCAATATTTCTCCAAGCCACAATGGAGAGCATTGGTATCCCTACTCGAGTGCAGACTGCATTTCGGATGTCTGAGGTTGCGGAACCTTATATACGTCGAAGGGCTGTGAGGCATCTGGAAAAGGGCAGGGTAGTGATCTTTGCAGCAGGAACTGGAAATCCATTCTTTACAACAGATACTGCTGCAGCACTTCGTGGTGCAGAGATCAATGCAGAGGTGGTGCTGAAAGCTACAAATGTTGATGGAGTTTACGATGAGGATCCTAGGTGTAACCCAAATGCCCGTCTTCTTGATACTCTTACATATCAGGAGGTGACATCAAAAGATCTTTCAGTGATGGACATGACTGCTATTACTTTATGCCAGGAGAACAAAATTCCTGTTGTTGTGTTCAATCTAAACAAACCAGGTAACATCTCAAAAGCCATAAAGGGGGAGAAGGTTGGCACGTTAATTGGGGCAGCATGGAATTCCACAGTGGCACCGAGAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00240 ko01100 map00240 map01100
Pfam Domains
Protein Families
AA_kinase

Protein Analysis

331

Amino Acids

35.41

Weight (kDa)

9.01

Isoelectric Point (pI)

44.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 90 - 299 5.1e-37 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014351)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18680 AT3G18680
fragaria_vesca FvH4_1g24030
malus_domestica MD01G1011700.v1.1 MD15G1338200.v1.1
prunus_persica Prupe.6G157900_v2.0.a1 Prupe.6G157900_v2.0.a1
pyrus_communis pycom15g28830
rosa_chinensis RchiOBHm_Chr2g0120171
rosa_laevigata RLG00000018528
rosa_multiflora Rmu_sc0015469.1_g000003
rosa_roxburghii Rroxscaffold_2G00123650
rosa_rugosa Rorug02G0227300 Rorug02G0227400
rosa_samantha Rh2AG284000 Rh2DG309000
rosa_wichuraiana Rw2G022750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 258
AccB1I GGYRCC 1 cut(s) 982
AccII CGCG 1 cut(s) 118
AciI CCGC 4 cut(s) 116, 288, 465, 581
AclWI GGATC 2 cut(s) 755, 768
AcsI RAATTY 3 cut(s) 499, 876, 970
AdeI CACNNNGTG 1 cut(s) 695
AfiI CCNNNNNNNGG 1 cut(s) 933
AgsI TTSAA 2 cut(s) 504, 895
AjnI CCWGG 3 cut(s) 431, 864, 907
AloI GAACNNNNNNTCC 2 cut(s) 643, 675
AluBI AGCT 3 cut(s) 132, 236, 731
AluI AGCT 3 cut(s) 132, 236, 731
Alw21I GWGCWC 1 cut(s) 50
Alw26I GTCTC 1 cut(s) 58
AlwI GGATC 2 cut(s) 755, 768
AlwNI CAGNNNCTG 2 cut(s) 653, 680
Ama87I CYCGRG 1 cut(s) 546
AoxI GGCC 1 cut(s) 95
ApeKI GCWGC 5 cut(s) 132, 644, 683, 686, 962
ApoI RAATTY 3 cut(s) 499, 876, 970
Asp700I GAANNNNTTC 1 cut(s) 187
AspA2I CCTAGG 1 cut(s) 764
AspLEI GCGC 1 cut(s) 120
AsuHPI GGTGA 2 cut(s) 232, 826
AvaI CYCGRG 1 cut(s) 546
AvrII CCTAGG 1 cut(s) 764
BamHI GGATCC 1 cut(s) 760
BanI GGYRCC 1 cut(s) 982
BbsI GAAGAC 3 cut(s) 132, 190, 779
Bbv12I GWGCWC 1 cut(s) 50
BbvI GCAGC 5 cut(s) 119, 656, 670, 698, 974
BccI CCATC 2 cut(s) 737, 832
BciT130I CCWGG 3 cut(s) 433, 866, 909
BciVI GTATCC 1 cut(s) 548
BcoDI GTCTC 1 cut(s) 58
BfaI CTAG 1 cut(s) 765
BfmI CTRYAG 1 cut(s) 684
BfuI GTATCC 1 cut(s) 548
BglII AGATCT 1 cut(s) 826
BisI GCNGC 5 cut(s) 133, 645, 684, 687, 963
BlnI CCTAGG 1 cut(s) 764
BlsI GCNGC 5 cut(s) 134, 646, 685, 688, 964
Bme1390I CCNGG 3 cut(s) 433, 866, 909
BmeT110I CYCGRG 1 cut(s) 546
BmiI GGNNCC 3 cut(s) 585, 762, 984
BmrFI CCNGG 3 cut(s) 433, 866, 909
BmsI GCATC 3 cut(s) 371, 437, 622
BpiI GAAGAC 3 cut(s) 132, 190, 779
BsaBI GATNNNNATC 1 cut(s) 759
BsaJI CCNNGG 4 cut(s) 376, 421, 432, 764
Bsc4I CCNNNNNNNGG 1 cut(s) 933
Bse1I ACTGG 1 cut(s) 658
Bse8I GATNNNNATC 1 cut(s) 759
BseBI CCWGG 3 cut(s) 433, 866, 909
BseDI CCNNGG 4 cut(s) 376, 421, 432, 764
BseGI GGATG 4 cut(s) 428, 461, 486, 573
BseJI GATNNNNATC 1 cut(s) 759
BseLI CCNNNNNNNGG 1 cut(s) 933
BseMII CTCAG 4 cut(s) 35, 74, 113, 564
BseNI ACTGG 1 cut(s) 658
BseRI GAGGAG 2 cut(s) 4, 7
BseXI GCAGC 5 cut(s) 119, 656, 670, 698, 974
BseYI CCCAGC 1 cut(s) 236
BsgI GTGCAG 2 cut(s) 572, 720
Bsh1236I CGCG 1 cut(s) 118
BshFI GGCC 1 cut(s) 97
BshNI GGYRCC 1 cut(s) 982
BsiHKAI GWGCWC 1 cut(s) 50
BsiHKCI CYCGRG 1 cut(s) 546
BsiSI CCGG 3 cut(s) 106, 156, 303
BslI CCNNNNNNNGG 1 cut(s) 933
BsmAI GTCTC 1 cut(s) 58
BsnI GGCC 1 cut(s) 97
BsoBI CYCGRG 1 cut(s) 546
Bsp1286I GDGCHC 1 cut(s) 50
Bsp143I GATC 5 cut(s) 307, 636, 705, 760, 826
BspACI CCGC 4 cut(s) 116, 288, 465, 581
BspANI GGCC 1 cut(s) 97
BspCNI CTCAG 4 cut(s) 36, 75, 112, 565
BspFNI CGCG 1 cut(s) 118
BspLI GGNNCC 3 cut(s) 585, 762, 984
BspMAI CTGCAG 1 cut(s) 688
BspPI GGATC 2 cut(s) 755, 768
BspT107I GGYRCC 1 cut(s) 982
BsrI ACTGG 1 cut(s) 658
BssECI CCNNGG 4 cut(s) 376, 421, 432, 764
BssMI GATC 5 cut(s) 307, 636, 705, 760, 826
BssT1I CCWWGG 1 cut(s) 764
Bst2UI CCWGG 3 cut(s) 433, 866, 909
Bst4CI ACNGT 4 cut(s) 52, 458, 493, 979
Bst6I CTCTTC 2 cut(s) 39, 61
BstDEI CTNAG 4 cut(s) 44, 83, 99, 573
BstDSI CCRYGG 1 cut(s) 421
BstF5I GGATG 4 cut(s) 428, 461, 486, 573
BstFNI CGCG 1 cut(s) 118
BstHHI GCGC 1 cut(s) 120
BstKTI GATC 5 cut(s) 310, 639, 708, 763, 829
BstMAI GTCTC 1 cut(s) 58
BstMBI GATC 5 cut(s) 307, 636, 705, 760, 826
BstMWI GCNNNNNNNGC 1 cut(s) 434
BstNI CCWGG 3 cut(s) 433, 866, 909
BstSCI CCNGG 3 cut(s) 431, 864, 907
BstSFI CTRYAG 1 cut(s) 684
BstUI CGCG 1 cut(s) 118
BstV1I GCAGC 5 cut(s) 119, 656, 670, 698, 974
BstV2I GAAGAC 3 cut(s) 132, 190, 779
BstX2I RGATCY 2 cut(s) 760, 826
BstYI RGATCY 2 cut(s) 760, 826
BsuI GTATCC 1 cut(s) 548
BsuRI GGCC 1 cut(s) 97
BtgI CCRYGG 1 cut(s) 421
BtsCI GGATG 4 cut(s) 428, 461, 486, 573
BtsIMutI CAGTG 3 cut(s) 48, 840, 984
CaiI CAGNNNCTG 2 cut(s) 653, 680
CfoI GCGC 1 cut(s) 120
CsiI ACCWGGT 1 cut(s) 907
CviAII CATG 3 cut(s) 844, 966, 993
DdeI CTNAG 4 cut(s) 44, 83, 99, 573
DpnI GATC 5 cut(s) 309, 638, 707, 762, 828
DpnII GATC 5 cut(s) 307, 636, 705, 760, 826
DraIII CACNNNGTG 1 cut(s) 695
Eam1104I CTCTTC 2 cut(s) 39, 61
EarI CTCTTC 2 cut(s) 39, 61
Eco130I CCWWGG 1 cut(s) 764
Eco147I AGGCCT 1 cut(s) 97
Eco88I CYCGRG 1 cut(s) 546
EcoRI GAATTC 2 cut(s) 499, 970
EcoRII CCWGG 3 cut(s) 431, 864, 907
EcoT14I CCWWGG 1 cut(s) 764
ErhI CCWWGG 1 cut(s) 764
FaeI CATG 3 cut(s) 847, 969, 996
FatI CATG 3 cut(s) 843, 965, 992
Fnu4HI GCNGC 5 cut(s) 133, 645, 684, 687, 963
FokI GGATG 4 cut(s) 415, 448, 493, 580
Fsp4HI GCNGC 5 cut(s) 133, 645, 684, 687, 963
FspBI CTAG 1 cut(s) 765
GlaI GCGC 1 cut(s) 119
GluI GCNGC 5 cut(s) 133, 645, 684, 687, 963
GsaI CCCAGC 1 cut(s) 240
HaeIII GGCC 1 cut(s) 97
HapII CCGG 3 cut(s) 106, 156, 303
HhaI GCGC 1 cut(s) 120
Hin1II CATG 3 cut(s) 847, 969, 996
Hin6I GCGC 1 cut(s) 118
HinP1I GCGC 1 cut(s) 118
HinfI GANTC 4 cut(s) 152, 164, 208, 370
HpaII CCGG 3 cut(s) 106, 156, 303
HphI GGTGA 2 cut(s) 232, 826
Hpy166II GTNNAC 1 cut(s) 751
Hpy188I TCNGA 7 cut(s) 45, 84, 102, 145, 163, 567, 574
Hpy188III TCNNGA 6 cut(s) 246, 452, 478, 617, 791, 809
Hpy8I GTNNAC 1 cut(s) 751
Hpy99I CGWCG 1 cut(s) 600
HpyAV CCTTC 3 cut(s) 261, 594, 934
HpyCH4III ACNGT 4 cut(s) 52, 458, 493, 979
HpyCH4IV ACGT 2 cut(s) 595, 950
HpyCH4V TGCA 8 cut(s) 350, 362, 553, 560, 644, 686, 701, 713
HpyF10VI GCNNNNNNNGC 1 cut(s) 434
HpyF3I CTNAG 4 cut(s) 44, 83, 99, 573
HpySE526I ACGT 2 cut(s) 595, 950
Hsp92II CATG 3 cut(s) 847, 969, 996
HspAI GCGC 1 cut(s) 118
Kzo9I GATC 5 cut(s) 307, 636, 705, 760, 826
LmnI GCTCC 1 cut(s) 425
Lsp1109I GCAGC 5 cut(s) 119, 656, 670, 698, 974
LweI GCATC 3 cut(s) 371, 437, 622
MabI ACCWGGT 1 cut(s) 907
MaeI CTAG 1 cut(s) 765
MaeII ACGT 2 cut(s) 595, 950
MaeIII GTNAC 6 cut(s) 220, 334, 367, 770, 814, 911
MalI GATC 5 cut(s) 309, 638, 707, 762, 828
MboI GATC 5 cut(s) 307, 636, 705, 760, 826
MboII GAAGA 8 cut(s) 26, 48, 51, 54, 57, 132, 195, 779
MflI RGATCY 2 cut(s) 760, 826
MhlI GDGCHC 1 cut(s) 50
MluCI AATT 5 cut(s) 345, 499, 876, 954, 970
MlyI GAGTC 4 cut(s) 146, 158, 202, 364
MroXI GAANNNNTTC 1 cut(s) 187
MseI TTAA 2 cut(s) 279, 953
MspA1I CMGCKG 1 cut(s) 467
MspI CCGG 3 cut(s) 106, 156, 303
MspR9I CCNGG 3 cut(s) 433, 866, 909
MvaI CCWGG 3 cut(s) 433, 866, 909
MvnI CGCG 1 cut(s) 118
MwoI GCNNNNNNNGC 1 cut(s) 434
NdeII GATC 5 cut(s) 307, 636, 705, 760, 826
NlaIII CATG 3 cut(s) 847, 969, 996
NlaIV GGNNCC 3 cut(s) 585, 762, 984
NmeAIII GCCGAG 1 cut(s) 357
NmuCI GTSAC 3 cut(s) 220, 367, 814
PaeR7I CTCGAG 1 cut(s) 546
PceI AGGCCT 1 cut(s) 97
PdmI GAANNNNTTC 1 cut(s) 187
PkrI GCNGC 5 cut(s) 134, 646, 685, 688, 964
PleI GAGTC 4 cut(s) 146, 158, 202, 364
PpsI GAGTC 4 cut(s) 146, 158, 202, 364
PsiI TTATAA 1 cut(s) 258
Psp6I CCWGG 3 cut(s) 431, 864, 907
PspFI CCCAGC 1 cut(s) 236
PspGI CCWGG 3 cut(s) 431, 864, 907
PspN4I GGNNCC 3 cut(s) 585, 762, 984
PspXI VCTCGAGB 1 cut(s) 546
PsrI GAACNNNNNNTAC 2 cut(s) 576, 608
PstI CTGCAG 1 cut(s) 688
PstNI CAGNNNCTG 2 cut(s) 653, 680
PsuI RGATCY 2 cut(s) 760, 826
SaqAI TTAA 2 cut(s) 279, 953
SatI GCNGC 5 cut(s) 133, 645, 684, 687, 963
Sau3AI GATC 5 cut(s) 307, 636, 705, 760, 826
SchI GAGTC 4 cut(s) 146, 158, 202, 364
ScrFI CCNGG 3 cut(s) 433, 866, 909
SduI GDGCHC 1 cut(s) 50
SexAI ACCWGGT 1 cut(s) 907
SfaNI GCATC 3 cut(s) 371, 437, 622
SfcI CTRYAG 1 cut(s) 684
Sfr274I CTCGAG 1 cut(s) 546
SlaI CTCGAG 1 cut(s) 546
SmlI CTYRAG 1 cut(s) 546
SmoI CTYRAG 1 cut(s) 546
Sse9I AATT 5 cut(s) 345, 499, 876, 954, 970
SseBI AGGCCT 1 cut(s) 97
SsiI CCGC 4 cut(s) 116, 288, 465, 581
SspI AATATT 2 cut(s) 322, 507
SspMI CTAG 1 cut(s) 765
StuI AGGCCT 1 cut(s) 97
StyD4I CCNGG 3 cut(s) 431, 864, 907
StyI CCWWGG 1 cut(s) 764
TaaI ACNGT 4 cut(s) 52, 458, 493, 979
TaiI ACGT 2 cut(s) 598, 953
TaqI TCGA 2 cut(s) 547, 598
TasI AATT 5 cut(s) 345, 499, 876, 954, 970
Tru1I TTAA 2 cut(s) 279, 953
Tru9I TTAA 2 cut(s) 279, 953
TscAI CASTG 3 cut(s) 55, 840, 984
TseFI GTSAC 3 cut(s) 220, 367, 814
TseI GCWGC 5 cut(s) 132, 644, 683, 686, 962
Tsp45I GTSAC 3 cut(s) 220, 367, 814
TspDTI ATGAA 4 cut(s) 242, 246, 450, 512
TspGWI ACGGA 1 cut(s) 410
TspRI CASTG 3 cut(s) 55, 840, 984
XapI RAATTY 3 cut(s) 499, 876, 970
XcmI CCANNNNNNNNNTGG 1 cut(s) 258
XhoI CTCGAG 1 cut(s) 546
XmaJI CCTAGG 1 cut(s) 764
XmnI GAANNNNTTC 1 cut(s) 187
XspI CTAG 1 cut(s) 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.