Rh2AG284000

Amino acid kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0014351
Physical Location & Seq
Forward (+)
34574819 .. 34578294
3476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG284000.1

Sequence Viewer

Length: 1278 bp
ATGCGACGTCTTGAGATCCACTCCAGTATTGAAGTTTTAAGGGAACTTTACCAAGAGCCTCTCCTACAGAGTTCATCATCTCCGTTTCCGGCGGGAAAATGCTTTTCAACTGCAACATACGCGCCATTTTCAAATGGGGATAGAATTAAACGACAACAGGTAAAACAAAACCGACATGTCGTTAGTTTGTCAATATTCTTAACGTTATCCTATTATATATTGAATGAAACAGAGGCCTTGGCGCCGCTGCTGCGGAGGCTGCTTCATTTTCAGTTTTTAATGGCAATCTCCTCCTCCTCCTCCTCTGTTCCTCTTCTATCTCTGAACACTGTCTCTTCTTCTTCTTCTTCGTTTCCATTTTCTCTGAGTTGTGTGAAGCCTCAGAGCCGGAGAAATCAGCGCTTGGTGGTTAGCTGCTCGTCTTCTGAAACCGACTCCGGTTCTGACTCACTCAATGGAAATGGAAGACATTCCCAATTGTCGTCTATGACTCCTTTTGGGGTGACAATGAATGAAGCTGGGTTGTCCAGACCACCTTATAAATGGCGAAGGGTCTTGCTTAAAGTAAGTGGAGAAGCACTTGCCGGAGATCACACACAGAATATTGACCCGAAGGTAACAATGGAAATTGCAAGGGAGGTTGCATCTGTGACTCGCCTCGGCATTGAGGTTGCCATTGTTGTTGGTGGGGGAAATATATTCCGTGGAGCATCCTGGGCTGGAAGTAGTGGTCTTGACCGTTCATCCGCTGATTACATCGGGATGTTGGCTACTGTAATGAATTCAATATTTCTCCAAGCCACAATGGAGAGTATTGGTATCCCTACTCGAGTGCAGACTGCATTTCGGATGTCTGAGGTTGCAGAACCTTATATACGTCGAAGGGCTGTGAGGCATCTGGAAAAGGGCAGGGTAGTGATCTTTGCAGCAGGAACTGGAAATCCATTCTTTACAACAGATACTGCTGCAGCACTTCGTGGTGCAGAGATCAATGCAGAGGTGGTGCTGAAAGCTACAAATGTTGATGGAGTTTACGATGAGGATCCTAGGTGTAACCCAAATGCCTGTCTTCTTGATACTCTTACATATCAGGAGGTGACATCAAAAGATCTTTCAGTGATGGACATGACTGCTATTACTTTATGCCAGGAGAACAAAATTCCTGTTGTTGTGTTCAATCTAAACAAACCAGGTAACATCTCAAAAGCCATAAAGGGGGAGAAGGTTGGCACGTTAATTGGGGCAGCATGGAATTCCACAGTGGCGCCGAGAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00240 ko01100 map00240 map01100
Pfam Domains
Protein Families
AA_kinase

Protein Analysis

425

Amino Acids

46.24

Weight (kDa)

9.2

Isoelectric Point (pI)

53.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 184 - 393 3.7e-36 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014351)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18680 AT3G18680
fragaria_vesca FvH4_1g24030
malus_domestica MD01G1011700.v1.1 MD15G1338200.v1.1
prunus_persica Prupe.6G157900_v2.0.a1 Prupe.6G157900_v2.0.a1
pyrus_communis pycom15g28830
rosa_chinensis RchiOBHm_Chr2g0120171
rosa_laevigata RLG00000018528
rosa_multiflora Rmu_sc0015469.1_g000003
rosa_roxburghii Rroxscaffold_2G00123650
rosa_rugosa Rorug02G0227300 Rorug02G0227400
rosa_samantha Rh2AG284000 Rh2DG309000
rosa_wichuraiana Rw2G022750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 540
AatII GACGTC 1 cut(s) 10
AccB1I GGYRCC 2 cut(s) 241, 1264
AccII CGCG 1 cut(s) 122
AciI CCGC 4 cut(s) 92, 245, 253, 747
AclI AACGTT 1 cut(s) 203
AclWI GGATC 3 cut(s) 10, 1037, 1050
AcsI RAATTY 3 cut(s) 781, 1158, 1252
AcyI GRCGYC 3 cut(s) 7, 242, 1265
AdeI CACNNNGTG 1 cut(s) 977
AfeI AGCGCT 1 cut(s) 401
AfiI CCNNNNNNNGG 1 cut(s) 1215
AflIII ACRYGT 1 cut(s) 175
AgsI TTSAA 6 cut(s) 32, 108, 132, 223, 786, 1177
AjnI CCWGG 3 cut(s) 713, 1146, 1189
AloI GAACNNNNNNTCC 2 cut(s) 925, 957
AluBI AGCT 3 cut(s) 414, 518, 1013
AluI AGCT 3 cut(s) 414, 518, 1013
Alw26I GTCTC 1 cut(s) 337
AlwI GGATC 3 cut(s) 10, 1037, 1050
AlwNI CAGNNNCTG 2 cut(s) 935, 962
Ama87I CYCGRG 1 cut(s) 828
Aor51HI AGCGCT 1 cut(s) 401
AoxI GGCC 1 cut(s) 234
ApeKI GCWGC 8 cut(s) 247, 250, 259, 414, 926, 965, 968, 1244
ApoI RAATTY 3 cut(s) 781, 1158, 1252
Asp700I GAANNNNTTC 1 cut(s) 469
AspA2I CCTAGG 1 cut(s) 1046
AspLEI GCGC 4 cut(s) 124, 244, 402, 1267
AsuHPI GGTGA 2 cut(s) 514, 1108
AvaI CYCGRG 1 cut(s) 828
AvrII CCTAGG 1 cut(s) 1046
BamHI GGATCC 1 cut(s) 1042
BanI GGYRCC 2 cut(s) 241, 1264
BbsI GAAGAC 3 cut(s) 414, 472, 1061
BbvI GCAGC 8 cut(s) 234, 237, 246, 401, 938, 952, 980, 1256
BccI CCATC 2 cut(s) 1019, 1114
BceAI ACGGC 8 cut(s) 250, 655, 1330, 1371, 1390, 1434, 1559, 1761
BciT130I CCWGG 3 cut(s) 715, 1148, 1191
BciVI GTATCC 1 cut(s) 830
BcoDI GTCTC 1 cut(s) 337
BfaI CTAG 1 cut(s) 1047
BfmI CTRYAG 2 cut(s) 65, 966
BfoI RGCGCY 3 cut(s) 245, 403, 1268
BfuI GTATCC 1 cut(s) 830
BglII AGATCT 1 cut(s) 1108
BisI GCNGC 9 cut(s) 245, 248, 251, 260, 415, 927, 966, 969, 1245
BlnI CCTAGG 1 cut(s) 1046
BlsI GCNGC 9 cut(s) 246, 249, 252, 261, 416, 928, 967, 970, 1246
Bme1390I CCNGG 3 cut(s) 715, 1148, 1191
BmeT110I CYCGRG 1 cut(s) 828
BmiI GGNNCC 3 cut(s) 243, 1044, 1266
BmrFI CCNGG 3 cut(s) 715, 1148, 1191
BmsI GCATC 3 cut(s) 653, 719, 904
BpiI GAAGAC 3 cut(s) 414, 472, 1061
BplI GAGNNNNNCTC 1 cut(s) 37
BpmI CTGGAG 1 cut(s) 7
BpuEI CTTGAG 1 cut(s) 32
BsaBI GATNNNNATC 1 cut(s) 1041
BsaHI GRCGYC 3 cut(s) 7, 242, 1265
BsaJI CCNNGG 5 cut(s) 237, 658, 703, 714, 1046
BsaWI WCCGGW 1 cut(s) 437
Bsc4I CCNNNNNNNGG 1 cut(s) 1215
Bse1I ACTGG 2 cut(s) 24, 940
Bse8I GATNNNNATC 1 cut(s) 1041
BseBI CCWGG 3 cut(s) 715, 1148, 1191
BseDI CCNNGG 5 cut(s) 237, 658, 703, 714, 1046
BseGI GGATG 4 cut(s) 710, 743, 768, 855
BseJI GATNNNNATC 1 cut(s) 1041
BseLI CCNNNNNNNGG 1 cut(s) 1215
BseMII CTCAG 3 cut(s) 356, 395, 846
BseNI ACTGG 2 cut(s) 24, 940
BseRI GAGGAG 5 cut(s) 280, 283, 286, 289, 292
BseXI GCAGC 8 cut(s) 234, 237, 246, 401, 938, 952, 980, 1256
BseYI CCCAGC 1 cut(s) 518
BsgI GTGCAG 2 cut(s) 854, 1002
Bsh1236I CGCG 1 cut(s) 122
BshFI GGCC 1 cut(s) 236
BshNI GGYRCC 2 cut(s) 241, 1264
BsiHKCI CYCGRG 1 cut(s) 828
BsiSI CCGG 4 cut(s) 89, 388, 438, 585
BslI CCNNNNNNNGG 1 cut(s) 1215
BsmAI GTCTC 1 cut(s) 337
BsnI GGCC 1 cut(s) 236
BsoBI CYCGRG 1 cut(s) 828
Bsp143I GATC 6 cut(s) 15, 589, 918, 987, 1042, 1108
BspACI CCGC 4 cut(s) 92, 245, 253, 747
BspANI GGCC 1 cut(s) 236
BspCNI CTCAG 3 cut(s) 357, 394, 847
BspFNI CGCG 1 cut(s) 122
BspLI GGNNCC 3 cut(s) 243, 1044, 1266
BspMAI CTGCAG 1 cut(s) 970
BspPI GGATC 3 cut(s) 10, 1037, 1050
BspT107I GGYRCC 2 cut(s) 241, 1264
BsrI ACTGG 2 cut(s) 24, 940
BssECI CCNNGG 5 cut(s) 237, 658, 703, 714, 1046
BssMI GATC 6 cut(s) 15, 589, 918, 987, 1042, 1108
BssNI GRCGYC 3 cut(s) 7, 242, 1265
BssT1I CCWWGG 2 cut(s) 237, 1046
Bst2UI CCWGG 3 cut(s) 715, 1148, 1191
Bst4CI ACNGT 4 cut(s) 331, 740, 775, 1261
Bst6I CTCTTC 2 cut(s) 318, 340
BstACI GRCGYC 3 cut(s) 7, 242, 1265
BstDEI CTNAG 3 cut(s) 365, 381, 855
BstDSI CCRYGG 1 cut(s) 703
BstF5I GGATG 4 cut(s) 710, 743, 768, 855
BstFNI CGCG 1 cut(s) 122
BstH2I RGCGCY 3 cut(s) 245, 403, 1268
BstHHI GCGC 4 cut(s) 124, 244, 402, 1267
BstKTI GATC 6 cut(s) 18, 592, 921, 990, 1045, 1111
BstMAI GTCTC 1 cut(s) 337
BstMBI GATC 6 cut(s) 15, 589, 918, 987, 1042, 1108
BstMWI GCNNNNNNNGC 5 cut(s) 119, 250, 256, 259, 716
BstNI CCWGG 3 cut(s) 715, 1148, 1191
BstNSI RCATGY 1 cut(s) 179
BstSCI CCNGG 3 cut(s) 713, 1146, 1189
BstSFI CTRYAG 2 cut(s) 65, 966
BstUI CGCG 1 cut(s) 122
BstV1I GCAGC 8 cut(s) 234, 237, 246, 401, 938, 952, 980, 1256
BstV2I GAAGAC 3 cut(s) 414, 472, 1061
BstX2I RGATCY 3 cut(s) 15, 1042, 1108
BstYI RGATCY 3 cut(s) 15, 1042, 1108
BsuI GTATCC 1 cut(s) 830
BsuRI GGCC 1 cut(s) 236
BtgI CCRYGG 1 cut(s) 703
BtsCI GGATG 4 cut(s) 710, 743, 768, 855
BtsIMutI CAGTG 3 cut(s) 327, 1122, 1266
CaiI CAGNNNCTG 2 cut(s) 935, 962
CfoI GCGC 4 cut(s) 124, 244, 402, 1267
CsiI ACCWGGT 1 cut(s) 1189
CviAII CATG 4 cut(s) 176, 1126, 1248, 1275
DdeI CTNAG 3 cut(s) 365, 381, 855
DinI GGCGCC 2 cut(s) 243, 1266
DpnI GATC 6 cut(s) 17, 591, 920, 989, 1044, 1110
DpnII GATC 6 cut(s) 15, 589, 918, 987, 1042, 1108
DraIII CACNNNGTG 1 cut(s) 977
Eam1104I CTCTTC 2 cut(s) 318, 340
EarI CTCTTC 2 cut(s) 318, 340
Eco130I CCWWGG 2 cut(s) 237, 1046
Eco147I AGGCCT 1 cut(s) 236
Eco47III AGCGCT 1 cut(s) 401
Eco88I CYCGRG 1 cut(s) 828
EcoRI GAATTC 2 cut(s) 781, 1252
EcoRII CCWGG 3 cut(s) 713, 1146, 1189
EcoT14I CCWWGG 2 cut(s) 237, 1046
EgeI GGCGCC 2 cut(s) 243, 1266
EheI GGCGCC 2 cut(s) 243, 1266
ErhI CCWWGG 2 cut(s) 237, 1046
FaeI CATG 4 cut(s) 179, 1129, 1251, 1278
FatI CATG 4 cut(s) 175, 1125, 1247, 1274
FauI CCCGC 1 cut(s) 85
Fnu4HI GCNGC 9 cut(s) 245, 248, 251, 260, 415, 927, 966, 969, 1245
FokI GGATG 4 cut(s) 697, 730, 775, 862
Fsp4HI GCNGC 9 cut(s) 245, 248, 251, 260, 415, 927, 966, 969, 1245
FspBI CTAG 1 cut(s) 1047
GlaI GCGC 4 cut(s) 123, 243, 401, 1266
GluI GCNGC 9 cut(s) 245, 248, 251, 260, 415, 927, 966, 969, 1245
GsaI CCCAGC 1 cut(s) 522
GsuI CTGGAG 1 cut(s) 7
HaeII RGCGCY 3 cut(s) 245, 403, 1268
HaeIII GGCC 1 cut(s) 236
HapII CCGG 4 cut(s) 89, 388, 438, 585
HhaI GCGC 4 cut(s) 124, 244, 402, 1267
Hin1I GRCGYC 3 cut(s) 7, 242, 1265
Hin1II CATG 4 cut(s) 179, 1129, 1251, 1278
Hin6I GCGC 4 cut(s) 122, 242, 400, 1265
HinP1I GCGC 4 cut(s) 122, 242, 400, 1265
HinfI GANTC 4 cut(s) 434, 446, 490, 652
HpaII CCGG 4 cut(s) 89, 388, 438, 585
HphI GGTGA 2 cut(s) 514, 1108
Hpy166II GTNNAC 1 cut(s) 1033
Hpy188I TCNGA 7 cut(s) 324, 366, 384, 427, 445, 849, 856
Hpy188III TCNNGA 7 cut(s) 11, 528, 734, 760, 899, 1073, 1091
Hpy8I GTNNAC 1 cut(s) 1033
Hpy99I CGWCG 2 cut(s) 9, 882
HpyAV CCTTC 4 cut(s) 543, 607, 876, 1216
HpyCH4III ACNGT 4 cut(s) 331, 740, 775, 1261
HpyCH4IV ACGT 4 cut(s) 7, 203, 877, 1232
HpyF10VI GCNNNNNNNGC 5 cut(s) 119, 250, 256, 259, 716
HpyF3I CTNAG 3 cut(s) 365, 381, 855
HpySE526I ACGT 4 cut(s) 7, 203, 877, 1232
Hsp92I GRCGYC 3 cut(s) 7, 242, 1265
Hsp92II CATG 4 cut(s) 179, 1129, 1251, 1278
HspAI GCGC 4 cut(s) 122, 242, 400, 1265
KasI GGCGCC 2 cut(s) 241, 1264
Kzo9I GATC 6 cut(s) 15, 589, 918, 987, 1042, 1108
LmnI GCTCC 1 cut(s) 707
Lsp1109I GCAGC 8 cut(s) 234, 237, 246, 401, 938, 952, 980, 1256
LweI GCATC 3 cut(s) 653, 719, 904
MabI ACCWGGT 1 cut(s) 1189
MaeI CTAG 1 cut(s) 1047
MaeII ACGT 4 cut(s) 7, 203, 877, 1232
MaeIII GTNAC 6 cut(s) 502, 616, 649, 1052, 1096, 1193
MalI GATC 6 cut(s) 17, 591, 920, 989, 1044, 1110
MboI GATC 6 cut(s) 15, 589, 918, 987, 1042, 1108
MboII GAAGA 9 cut(s) 305, 327, 330, 333, 336, 339, 414, 477, 1061
MfeI CAATTG 1 cut(s) 476
MflI RGATCY 3 cut(s) 15, 1042, 1108
MluCI AATT 7 cut(s) 144, 476, 627, 781, 1158, 1236, 1252
Mly113I GGCGCC 2 cut(s) 242, 1265
MlyI GAGTC 4 cut(s) 428, 440, 484, 646
MroXI GAANNNNTTC 1 cut(s) 469
MseI TTAA 6 cut(s) 38, 147, 200, 278, 561, 1235
MslI CAYNNNNRTG 1 cut(s) 761
MspA1I CMGCKG 2 cut(s) 247, 749
MspI CCGG 4 cut(s) 89, 388, 438, 585
MspR9I CCNGG 3 cut(s) 715, 1148, 1191
MunI CAATTG 1 cut(s) 476
MvaI CCWGG 3 cut(s) 715, 1148, 1191
MvnI CGCG 1 cut(s) 122
MwoI GCNNNNNNNGC 5 cut(s) 119, 250, 256, 259, 716
NarI GGCGCC 2 cut(s) 242, 1265
NdeII GATC 6 cut(s) 15, 589, 918, 987, 1042, 1108
NlaIII CATG 4 cut(s) 179, 1129, 1251, 1278
NlaIV GGNNCC 3 cut(s) 243, 1044, 1266
NmeAIII GCCGAG 1 cut(s) 639
NmuCI GTSAC 3 cut(s) 502, 649, 1096
NspI RCATGY 1 cut(s) 179
PaeR7I CTCGAG 1 cut(s) 828
PceI AGGCCT 1 cut(s) 236
PciI ACATGT 1 cut(s) 175
PdmI GAANNNNTTC 1 cut(s) 469
PkrI GCNGC 9 cut(s) 246, 249, 252, 261, 416, 928, 967, 970, 1246
PleI GAGTC 4 cut(s) 428, 440, 484, 646
PluTI GGCGCC 2 cut(s) 245, 1268
PpsI GAGTC 4 cut(s) 428, 440, 484, 646
PscI ACATGT 1 cut(s) 175
PsiI TTATAA 1 cut(s) 540
Psp1406I AACGTT 1 cut(s) 203
Psp6I CCWGG 3 cut(s) 713, 1146, 1189
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 3 cut(s) 713, 1146, 1189
PspN4I GGNNCC 3 cut(s) 243, 1044, 1266
PspXI VCTCGAGB 1 cut(s) 828
PsrI GAACNNNNNNTAC 2 cut(s) 858, 890
PstI CTGCAG 1 cut(s) 970
PstNI CAGNNNCTG 2 cut(s) 935, 962
PsuI RGATCY 3 cut(s) 15, 1042, 1108
RseI CAYNNNNRTG 1 cut(s) 761
SaqAI TTAA 6 cut(s) 38, 147, 200, 278, 561, 1235
SatI GCNGC 9 cut(s) 245, 248, 251, 260, 415, 927, 966, 969, 1245
Sau3AI GATC 6 cut(s) 15, 589, 918, 987, 1042, 1108
SchI GAGTC 4 cut(s) 428, 440, 484, 646
ScrFI CCNGG 3 cut(s) 715, 1148, 1191
SexAI ACCWGGT 1 cut(s) 1189
SfaNI GCATC 3 cut(s) 653, 719, 904
SfcI CTRYAG 2 cut(s) 65, 966
SfoI GGCGCC 2 cut(s) 243, 1266
Sfr274I CTCGAG 1 cut(s) 828
SlaI CTCGAG 1 cut(s) 828
SmiMI CAYNNNNRTG 1 cut(s) 761
SmlI CTYRAG 2 cut(s) 11, 828
SmoI CTYRAG 2 cut(s) 11, 828
Sse9I AATT 7 cut(s) 144, 476, 627, 781, 1158, 1236, 1252
SseBI AGGCCT 1 cut(s) 236
SsiI CCGC 4 cut(s) 92, 245, 253, 747
SspDI GGCGCC 2 cut(s) 241, 1264
SspI AATATT 3 cut(s) 195, 604, 789
SspMI CTAG 1 cut(s) 1047
StuI AGGCCT 1 cut(s) 236
StyD4I CCNGG 3 cut(s) 713, 1146, 1189
StyI CCWWGG 2 cut(s) 237, 1046
TaaI ACNGT 4 cut(s) 331, 740, 775, 1261
TaiI ACGT 4 cut(s) 10, 206, 880, 1235
TaqI TCGA 2 cut(s) 829, 880
TasI AATT 7 cut(s) 144, 476, 627, 781, 1158, 1236, 1252
TauI GCSGC 1 cut(s) 247
Tru1I TTAA 6 cut(s) 38, 147, 200, 278, 561, 1235
Tru9I TTAA 6 cut(s) 38, 147, 200, 278, 561, 1235
TscAI CASTG 3 cut(s) 334, 1122, 1266
TseFI GTSAC 3 cut(s) 502, 649, 1096
TseI GCWGC 8 cut(s) 247, 250, 259, 414, 926, 965, 968, 1244
Tsp45I GTSAC 3 cut(s) 502, 649, 1096
TspDTI ATGAA 7 cut(s) 63, 240, 254, 524, 528, 732, 794
TspGWI ACGGA 2 cut(s) 72, 692
TspRI CASTG 3 cut(s) 334, 1122, 1266
XapI RAATTY 3 cut(s) 781, 1158, 1252
XceI RCATGY 1 cut(s) 179
XcmI CCANNNNNNNNNTGG 1 cut(s) 540
XhoI CTCGAG 1 cut(s) 828
XmaJI CCTAGG 1 cut(s) 1046
XmnI GAANNNNTTC 1 cut(s) 469
XspI CTAG 1 cut(s) 1047
ZraI GACGTC 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.