Prupe.6G157900_v2.0.a1

Amino acid kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0014351
Physical Location & Seq
Forward (+)
14192573 .. 14196563
3991 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G157900.1

Sequence Viewer

Length: 1011 bp
ATGGCAATTTCCACCTCCTCTGTGCCTGTTGTTTCTTTCAATTCTGTCTCCTCCTCCCCCTCCTCTTCTTTGCCATGTCCTTCTCTGAGTTCTTCGAGTGCCCGTTACCGTGGTTTGATGGTGAGTAATCGGCGCTTGCATGAGCGATTGGTTGTTAACTGCTCATCTTCTGAAATGGGTTCCAGTTCTGACTCTGCGAACGGAAGGCATACTCAAATGCCATCTATGGCTCCCTATGGGGTAACAATGAATGGAAATGGCTTGTCTGGGCCATCTTATAAATGGCAAAGGGTCTTACTTAAAGTAAGCGGAGAAGCACTTGCTGGAGATCGCACGCAGAATATTGACCCAAAGGTAACAATGGAAATTGCAAGAGAGGTTGCATCGGTGACTCGCCTTGGCATTGAGGTTGCCATTGTGGTTGGTGGGGGAAATATCTTCCGTGGATCTTCATGGGCGGGAAGCAGCGGTCTTGACCGGTCATCTGCTGATTACATTGGGATGTTGGCAACTGTAATGAATTCAATATTTCTTCAAGCAACAATGGAAAGTATCGGCATCCCTACTCGAGTGCAGACTGCATTTCGTATGTCTGAGGTTGCAGAGCCTTATATACGTCGAAGGGCTGTGAGGCATTTGGAGAAAGGGAGGGTAGTGATCTTTGCGGCAGGAACTGGAAATCCATTCTTTACCACAGATACTGCTGCAGCACTTCGTGGTGCAGAAATCAATGCAGAGGTTGTGCTGAAAGCTACAAATGTTGATGGGGTTTATGACGATAATCCAAGGTGTAACCCAAATGCCCGTCTTCTTGATAATCTAACATATCAGGAGGTGATGGCGAAAGATCTTTCGGTGATGGACATGACTGCCATTACTTTATGCCAGGAAAACAACATTCCTGTTGTTGTGTTCAATCTAAACAAACCGGGTAACATCTCAAAAGCCATAAAGGGAGAGAAGGTTGGCACATTGATTGGAACAACACGGAATTCTACTGTGACGACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00240 ko01100 map00240 map01100
Pfam Domains
Protein Families
AA_kinase

Protein Analysis

337

Amino Acids

35.86

Weight (kDa)

9.23

Isoelectric Point (pI)

38.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014351)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18680 AT3G18680
fragaria_vesca FvH4_1g24030
malus_domestica MD01G1011700.v1.1 MD15G1338200.v1.1
prunus_persica Prupe.6G157900_v2.0.a1 Prupe.6G157900_v2.0.a1
pyrus_communis pycom15g28830
rosa_chinensis RchiOBHm_Chr2g0120171
rosa_laevigata RLG00000018528
rosa_multiflora Rmu_sc0015469.1_g000003
rosa_roxburghii Rroxscaffold_2G00123650
rosa_rugosa Rorug02G0227300 Rorug02G0227400
rosa_samantha Rh2AG284000 Rh2DG309000
rosa_wichuraiana Rw2G022750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 279
AciI CCGC 4 cut(s) 309, 458, 468, 665
AclWI GGATC 1 cut(s) 454
AcsI RAATTY 2 cut(s) 520, 991
AdeI CACNNNGTG 1 cut(s) 716
AgeI ACCGGT 1 cut(s) 477
AgsI TTSAA 4 cut(s) 40, 525, 536, 916
AjiI CACGTC 1 cut(s) 1008
AjnI CCWGG 1 cut(s) 885
AloI GAACNNNNNNTCC 2 cut(s) 664, 696
AluBI AGCT 1 cut(s) 752
AluI AGCT 1 cut(s) 752
Alw26I GTCTC 1 cut(s) 52
AlwI GGATC 1 cut(s) 454
AlwNI CAGNNNCTG 2 cut(s) 674, 701
Ama87I CYCGRG 1 cut(s) 567
AoxI GGCC 1 cut(s) 269
ApeKI GCWGC 3 cut(s) 465, 704, 707
ApoI RAATTY 2 cut(s) 520, 991
AsiGI ACCGGT 1 cut(s) 477
AspLEI GCGC 1 cut(s) 135
AspS9I GGNCC 1 cut(s) 269
AsuC2I CCSGG 1 cut(s) 930
AsuHPI GGTGA 4 cut(s) 133, 400, 847, 868
AvaI CYCGRG 1 cut(s) 567
BaeGI GKGCMC 1 cut(s) 103
BbsI GAAGAC 1 cut(s) 800
BbvI GCAGC 3 cut(s) 477, 691, 719
BccI CCATC 6 cut(s) 112, 229, 280, 758, 832, 853
BciT130I CCWGG 1 cut(s) 887
BcnI CCSGG 1 cut(s) 930
BcoDI GTCTC 1 cut(s) 52
BfmI CTRYAG 1 cut(s) 705
BfoI RGCGCY 1 cut(s) 136
BglII AGATCT 1 cut(s) 847
BisI GCNGC 4 cut(s) 466, 666, 705, 708
BlsI GCNGC 4 cut(s) 467, 667, 706, 709
Bme1390I CCNGG 2 cut(s) 887, 930
BmeT110I CYCGRG 1 cut(s) 567
BmgBI CACGTC 1 cut(s) 1008
BmgT120I GGNCC 1 cut(s) 269
BmiI GGNNCC 2 cut(s) 181, 231
BmrFI CCNGG 2 cut(s) 887, 930
BmsI GCATC 2 cut(s) 392, 567
BpiI GAAGAC 1 cut(s) 800
BpmI CTGGAG 1 cut(s) 345
BpuMI CCSGG 1 cut(s) 930
BsaJI CCNNGG 4 cut(s) 109, 397, 442, 785
BsaWI WCCGGW 1 cut(s) 477
BsaXI ACNNNNNCTCC 2 cut(s) 948, 978
Bse118I RCCGGY 1 cut(s) 477
Bse1I ACTGG 2 cut(s) 183, 679
BseBI CCWGG 1 cut(s) 887
BseDI CCNNGG 4 cut(s) 109, 397, 442, 785
BseGI GGATG 2 cut(s) 507, 558
BseMII CTCAG 2 cut(s) 77, 585
BseNI ACTGG 2 cut(s) 183, 679
BseRI GAGGAG 4 cut(s) 7, 40, 43, 52
BseSI GKGCMC 1 cut(s) 103
BseXI GCAGC 3 cut(s) 477, 691, 719
BsgI GTGCAG 2 cut(s) 593, 741
BshFI GGCC 1 cut(s) 271
BshTI ACCGGT 1 cut(s) 477
BsiHKCI CYCGRG 1 cut(s) 567
BsiSI CCGG 2 cut(s) 478, 929
BsmAI GTCTC 1 cut(s) 52
BsnI GGCC 1 cut(s) 271
BsoBI CYCGRG 1 cut(s) 567
Bsp1286I GDGCHC 1 cut(s) 103
Bsp143I GATC 4 cut(s) 328, 446, 657, 847
BspACI CCGC 4 cut(s) 309, 458, 468, 665
BspANI GGCC 1 cut(s) 271
BspCNI CTCAG 2 cut(s) 78, 586
BspLI GGNNCC 2 cut(s) 181, 231
BspMAI CTGCAG 1 cut(s) 709
BspPI GGATC 1 cut(s) 454
BsrFI RCCGGY 1 cut(s) 477
BsrI ACTGG 2 cut(s) 183, 679
BssAI RCCGGY 1 cut(s) 477
BssECI CCNNGG 4 cut(s) 109, 397, 442, 785
BssMI GATC 4 cut(s) 328, 446, 657, 847
BssT1I CCWWGG 2 cut(s) 397, 785
Bst2UI CCWGG 1 cut(s) 887
Bst4CI ACNGT 3 cut(s) 110, 514, 1000
Bst6I CTCTTC 1 cut(s) 70
BstC8I GCNNGC 2 cut(s) 137, 335
BstDEI CTNAG 2 cut(s) 86, 594
BstDSI CCRYGG 2 cut(s) 109, 442
BstF5I GGATG 2 cut(s) 507, 558
BstH2I RGCGCY 1 cut(s) 136
BstHHI GCGC 1 cut(s) 135
BstKTI GATC 4 cut(s) 331, 449, 660, 850
BstMAI GTCTC 1 cut(s) 52
BstMBI GATC 4 cut(s) 328, 446, 657, 847
BstNI CCWGG 1 cut(s) 887
BstSCI CCNGG 2 cut(s) 885, 928
BstSFI CTRYAG 1 cut(s) 705
BstSLI GKGCMC 1 cut(s) 103
BstV1I GCAGC 3 cut(s) 477, 691, 719
BstV2I GAAGAC 1 cut(s) 800
BstX2I RGATCY 2 cut(s) 446, 847
BstYI RGATCY 2 cut(s) 446, 847
BsuRI GGCC 1 cut(s) 271
BtgI CCRYGG 2 cut(s) 109, 442
BtrI CACGTC 1 cut(s) 1008
BtsCI GGATG 2 cut(s) 507, 558
Cac8I GCNNGC 2 cut(s) 137, 335
CaiI CAGNNNCTG 2 cut(s) 674, 701
CfoI GCGC 1 cut(s) 135
Cfr10I RCCGGY 1 cut(s) 477
Cfr13I GGNCC 1 cut(s) 269
CspAI ACCGGT 1 cut(s) 477
CviAII CATG 4 cut(s) 75, 140, 453, 865
CviJI RGCY 7 cut(s) 230, 261, 271, 607, 626, 752, 947
CviKI_1 RGCY 7 cut(s) 230, 261, 271, 607, 626, 752, 947
DdeI CTNAG 2 cut(s) 86, 594
DpnI GATC 4 cut(s) 330, 448, 659, 849
DpnII GATC 4 cut(s) 328, 446, 657, 847
DraIII CACNNNGTG 1 cut(s) 716
Eam1104I CTCTTC 1 cut(s) 70
EarI CTCTTC 1 cut(s) 70
Eco130I CCWWGG 2 cut(s) 397, 785
Eco88I CYCGRG 1 cut(s) 567
EcoRI GAATTC 2 cut(s) 520, 991
EcoRII CCWGG 1 cut(s) 885
EcoT14I CCWWGG 2 cut(s) 397, 785
ErhI CCWWGG 2 cut(s) 397, 785
FaeI CATG 4 cut(s) 78, 143, 456, 868
FatI CATG 4 cut(s) 74, 139, 452, 864
FauI CCCGC 1 cut(s) 451
Fnu4HI GCNGC 4 cut(s) 466, 666, 705, 708
FokI GGATG 2 cut(s) 514, 545
Fsp4HI GCNGC 4 cut(s) 466, 666, 705, 708
GlaI GCGC 1 cut(s) 134
GluI GCNGC 4 cut(s) 466, 666, 705, 708
GsuI CTGGAG 1 cut(s) 345
HaeII RGCGCY 1 cut(s) 136
HaeIII GGCC 1 cut(s) 271
HapII CCGG 2 cut(s) 478, 929
HhaI GCGC 1 cut(s) 135
Hin1II CATG 4 cut(s) 78, 143, 456, 868
Hin6I GCGC 1 cut(s) 133
HinP1I GCGC 1 cut(s) 133
HincII GTYRAC 1 cut(s) 157
HindII GTYRAC 1 cut(s) 157
HinfI GANTC 2 cut(s) 191, 391
HpaI GTTAAC 1 cut(s) 157
HpaII CCGG 2 cut(s) 478, 929
HphI GGTGA 4 cut(s) 133, 400, 847, 868
Hpy166II GTNNAC 1 cut(s) 157
Hpy188I TCNGA 4 cut(s) 87, 172, 190, 595
Hpy188III TCNNGA 3 cut(s) 473, 812, 830
Hpy8I GTNNAC 1 cut(s) 157
Hpy99I CGWCG 2 cut(s) 621, 1009
HpyAV CCTTC 4 cut(s) 90, 198, 615, 955
HpyCH4III ACNGT 3 cut(s) 110, 514, 1000
HpyCH4IV ACGT 2 cut(s) 616, 1007
HpyCH4V TGCA 9 cut(s) 139, 371, 383, 574, 581, 602, 707, 722, 734
HpyF3I CTNAG 2 cut(s) 86, 594
HpySE526I ACGT 2 cut(s) 616, 1007
Hsp92II CATG 4 cut(s) 78, 143, 456, 868
HspAI GCGC 1 cut(s) 133
KspAI GTTAAC 1 cut(s) 157
Kzo9I GATC 4 cut(s) 328, 446, 657, 847
LmnI GCTCC 1 cut(s) 235
Lsp1109I GCAGC 3 cut(s) 477, 691, 719
LweI GCATC 2 cut(s) 392, 567
MaeII ACGT 2 cut(s) 616, 1007
MaeIII GTNAC 7 cut(s) 104, 241, 355, 388, 791, 932, 1000
MalI GATC 4 cut(s) 330, 448, 659, 849
MboI GATC 4 cut(s) 328, 446, 657, 847
MboII GAAGA 7 cut(s) 57, 84, 159, 430, 441, 524, 800
MflI RGATCY 2 cut(s) 446, 847
MhlI GDGCHC 1 cut(s) 103
MluCI AATT 5 cut(s) 6, 40, 366, 520, 991
MlyI GAGTC 2 cut(s) 185, 385
MseI TTAA 2 cut(s) 156, 300
MslI CAYNNNNRTG 1 cut(s) 500
MspA1I CMGCKG 1 cut(s) 468
MspI CCGG 2 cut(s) 478, 929
MspR9I CCNGG 2 cut(s) 887, 930
MvaI CCWGG 1 cut(s) 887
NciI CCSGG 1 cut(s) 930
NdeII GATC 4 cut(s) 328, 446, 657, 847
NlaIII CATG 4 cut(s) 78, 143, 456, 868
NlaIV GGNNCC 2 cut(s) 181, 231
NmuCI GTSAC 2 cut(s) 388, 1000
PaeR7I CTCGAG 1 cut(s) 567
PinAI ACCGGT 1 cut(s) 477
PkrI GCNGC 4 cut(s) 467, 667, 706, 709
PleI GAGTC 2 cut(s) 185, 385
PpsI GAGTC 2 cut(s) 185, 385
PsiI TTATAA 1 cut(s) 279
Psp6I CCWGG 1 cut(s) 885
PspGI CCWGG 1 cut(s) 885
PspN4I GGNNCC 2 cut(s) 181, 231
PspPI GGNCC 1 cut(s) 269
PspXI VCTCGAGB 1 cut(s) 567
PstI CTGCAG 1 cut(s) 709
PstNI CAGNNNCTG 2 cut(s) 674, 701
PsuI RGATCY 2 cut(s) 446, 847
RseI CAYNNNNRTG 1 cut(s) 500
SaqAI TTAA 2 cut(s) 156, 300
SatI GCNGC 4 cut(s) 466, 666, 705, 708
Sau3AI GATC 4 cut(s) 328, 446, 657, 847
Sau96I GGNCC 1 cut(s) 269
SchI GAGTC 2 cut(s) 185, 385
ScrFI CCNGG 2 cut(s) 887, 930
SduI GDGCHC 1 cut(s) 103
SfaNI GCATC 2 cut(s) 392, 567
SfcI CTRYAG 1 cut(s) 705
Sfr274I CTCGAG 1 cut(s) 567
SlaI CTCGAG 1 cut(s) 567
SmiMI CAYNNNNRTG 1 cut(s) 500
SmlI CTYRAG 1 cut(s) 567
SmoI CTYRAG 1 cut(s) 567
Sse9I AATT 5 cut(s) 6, 40, 366, 520, 991
SsiI CCGC 4 cut(s) 309, 458, 468, 665
SspI AATATT 2 cut(s) 343, 528
StyD4I CCNGG 2 cut(s) 885, 928
StyI CCWWGG 2 cut(s) 397, 785
TaaI ACNGT 3 cut(s) 110, 514, 1000
TaiI ACGT 2 cut(s) 619, 1010
TaqI TCGA 3 cut(s) 95, 568, 619
TasI AATT 5 cut(s) 6, 40, 366, 520, 991
TauI GCSGC 1 cut(s) 668
Tru1I TTAA 2 cut(s) 156, 300
Tru9I TTAA 2 cut(s) 156, 300
TseFI GTSAC 2 cut(s) 388, 1000
TseI GCWGC 3 cut(s) 465, 704, 707
Tsp45I GTSAC 2 cut(s) 388, 1000
TspDTI ATGAA 3 cut(s) 263, 441, 533
TspGWI ACGGA 3 cut(s) 216, 431, 1003
XapI RAATTY 2 cut(s) 520, 991
XcmI CCANNNNNNNNNTGG 1 cut(s) 279
XhoI CTCGAG 1 cut(s) 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.