RLG00000018528

Amino acid kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0014351
Physical Location & Seq
Forward (+)
31340384 .. 31344173
3790 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018528

Sequence Viewer

Length: 1206 bp
ATGCGACACCTTGAGATCCACTCCAGTATTGAAGTTTTAAGGGAACTTTACCAAGAGCCTCTCCGACAGAGTATATCATCGCCGTTCCGGCGGGAAAATGCTTTTCAACTGCAACATACGCGCCATTTTCAAATGGGGATAGAATTAAACGACAACAGAGGCCATTGGCGCCGCTGCTGCGGAGGCTGCTTCATTTTTCAGTTTTTAATGGCAATCTCCTCCTCCTCCTCCTGCTTTGTTCCTCTTCTATCTCTGAACACTGTCTCTTCTTCTTCTTCGTTTCCATTTTCTCTGAGCTGTGTGAAGCCTCAGAGCCGGAGATATCAGCGCTTGGTGGTTAGCTGCTCGTCTTCTGAAACCGACTCCGGCTCTGACTCACTCAATGGAAATGGAAGACATTCCCAAATGTCGTCTATGACTCCTTTTGGGGTGACAATGAATGAAGCTGGGTTGTCCAGACCACCTTATAAATGGCGAAGGGTCTTGCTTAAAGTAAGCGGAGAAGCACTTGCCGGAGATCACACACAGAATATTGACCCGAAGGTAACAATGGAAATTGCAAGGGAGGTTGCATCTGTGACTCGCCTCGGCATAGAGGTTGCCATTGTTGTTGGTGGGGGAAATATATTCCGTGGAGCATCCTGGGCTGGAAGTAGTGGTCTTGACCGTTCATCCGCTGATTACATCGGGATGTTGGCTACTGTAATGAATTCAATATTTCTCCAAGCCACAATGGAGAGTATTGGTATCCCTACTCGGGTGCAGACTGCATTTCGGATGTCTGAGGTTGCAGAACCTTATATACGTCGAAGGGCTGTGAGGCATCTGGAAAAGGGCAGGGTAGTGATCTTTGCAGCAGGAACTGGAAATCCATTCTTTACAACAGATACTGCTGCAGCACTTCGTGGTGCAGAGATCAATGCAGAGGTGGTGCTGAAAGCTACAAATGTCGATGGAGTTTACGATGAGGATCCTAGGTGTAACCCAAATGCCTGTCTTCTTGATACTCTTACATATCAGGAGGTGACATCAAAAGATCTTTCAGTGATGGACATGACTGCTATTACTTTATGCCAGGAGAACAAAATTCCTGTTGTTGTGTTCAATCTAAACAAACCAGGTAACATCTCAAAAGCCATAAAGGGGGAGAAGGTTGGCACGTTAATTGGGGCAGCATGGAATTCCACAGTGGCGCCAAGAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00240 ko01100 map00240 map01100
Pfam Domains
Protein Families
AA_kinase

Protein Analysis

402

Amino Acids

43.97

Weight (kDa)

8.85

Isoelectric Point (pI)

51.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 160 - 369 3.2e-36 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014351)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18680 AT3G18680
fragaria_vesca FvH4_1g24030
malus_domestica MD01G1011700.v1.1 MD15G1338200.v1.1
prunus_persica Prupe.6G157900_v2.0.a1 Prupe.6G157900_v2.0.a1
pyrus_communis pycom15g28830
rosa_chinensis RchiOBHm_Chr2g0120171
rosa_laevigata RLG00000018528
rosa_multiflora Rmu_sc0015469.1_g000003
rosa_roxburghii Rroxscaffold_2G00123650
rosa_rugosa Rorug02G0227300 Rorug02G0227400
rosa_samantha Rh2AG284000 Rh2DG309000
rosa_wichuraiana Rw2G022750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 468
AccB1I GGYRCC 2 cut(s) 168, 1192
AccII CGCG 1 cut(s) 121
AciI CCGC 5 cut(s) 91, 172, 180, 498, 675
AclWI GGATC 3 cut(s) 10, 965, 978
AcsI RAATTY 3 cut(s) 709, 1086, 1180
AcyI GRCGYC 2 cut(s) 169, 1193
AdeI CACNNNGTG 1 cut(s) 905
AfeI AGCGCT 1 cut(s) 329
AfiI CCNNNNNNNGG 2 cut(s) 757, 1143
AgsI TTSAA 5 cut(s) 32, 107, 131, 714, 1105
AjnI CCWGG 3 cut(s) 641, 1074, 1117
AloI GAACNNNNNNTCC 2 cut(s) 853, 885
AluBI AGCT 4 cut(s) 297, 342, 446, 941
AluI AGCT 4 cut(s) 297, 342, 446, 941
Alw26I GTCTC 1 cut(s) 268
AlwI GGATC 3 cut(s) 10, 965, 978
AlwNI CAGNNNCTG 2 cut(s) 863, 890
Ama87I CYCGRG 1 cut(s) 756
Aor51HI AGCGCT 1 cut(s) 329
AoxI GGCC 1 cut(s) 160
ApeKI GCWGC 8 cut(s) 174, 177, 186, 342, 854, 893, 896, 1172
ApoI RAATTY 3 cut(s) 709, 1086, 1180
Asp700I GAANNNNTTC 1 cut(s) 397
AspA2I CCTAGG 1 cut(s) 974
AspLEI GCGC 4 cut(s) 123, 171, 330, 1195
AsuHPI GGTGA 2 cut(s) 442, 1036
AvaI CYCGRG 1 cut(s) 756
AvrII CCTAGG 1 cut(s) 974
BamHI GGATCC 1 cut(s) 970
BanI GGYRCC 2 cut(s) 168, 1192
BbsI GAAGAC 3 cut(s) 342, 400, 989
BbvI GCAGC 8 cut(s) 161, 164, 173, 329, 866, 880, 908, 1184
BccI CCATC 2 cut(s) 947, 1042
BceAI ACGGC 1 cut(s) 67
BciT130I CCWGG 3 cut(s) 643, 1076, 1119
BciVI GTATCC 1 cut(s) 758
BcoDI GTCTC 1 cut(s) 268
BfaI CTAG 1 cut(s) 975
BfmI CTRYAG 1 cut(s) 894
BfoI RGCGCY 3 cut(s) 172, 331, 1196
BfuI GTATCC 1 cut(s) 758
BglI GCCNNNNNGGC 1 cut(s) 88
BglII AGATCT 1 cut(s) 1036
BisI GCNGC 9 cut(s) 172, 175, 178, 187, 343, 855, 894, 897, 1173
BlnI CCTAGG 1 cut(s) 974
BlsI GCNGC 9 cut(s) 173, 176, 179, 188, 344, 856, 895, 898, 1174
Bme1390I CCNGG 3 cut(s) 643, 1076, 1119
BmeT110I CYCGRG 1 cut(s) 756
BmiI GGNNCC 3 cut(s) 170, 972, 1194
BmrFI CCNGG 3 cut(s) 643, 1076, 1119
BmsI GCATC 3 cut(s) 581, 647, 832
BpiI GAAGAC 3 cut(s) 342, 400, 989
BplI GAGNNNNNCTC 1 cut(s) 37
BpmI CTGGAG 1 cut(s) 7
BpuEI CTTGAG 1 cut(s) 32
BsaBI GATNNNNATC 1 cut(s) 969
BsaHI GRCGYC 2 cut(s) 169, 1193
BsaJI CCNNGG 4 cut(s) 586, 631, 642, 974
Bsc4I CCNNNNNNNGG 2 cut(s) 757, 1143
Bse1I ACTGG 2 cut(s) 24, 868
Bse8I GATNNNNATC 1 cut(s) 969
BseBI CCWGG 3 cut(s) 643, 1076, 1119
BseDI CCNNGG 4 cut(s) 586, 631, 642, 974
BseGI GGATG 4 cut(s) 638, 671, 696, 783
BseJI GATNNNNATC 1 cut(s) 969
BseLI CCNNNNNNNGG 2 cut(s) 757, 1143
BseMII CTCAG 3 cut(s) 284, 323, 774
BseNI ACTGG 2 cut(s) 24, 868
BseRI GAGGAG 4 cut(s) 208, 211, 214, 217
BseXI GCAGC 8 cut(s) 161, 164, 173, 329, 866, 880, 908, 1184
BseYI CCCAGC 1 cut(s) 446
BsgI GTGCAG 2 cut(s) 782, 930
Bsh1236I CGCG 1 cut(s) 121
BshFI GGCC 1 cut(s) 162
BshNI GGYRCC 2 cut(s) 168, 1192
BsiHKCI CYCGRG 1 cut(s) 756
BsiSI CCGG 4 cut(s) 88, 316, 366, 513
BslI CCNNNNNNNGG 2 cut(s) 757, 1143
BsmAI GTCTC 1 cut(s) 268
BsnI GGCC 1 cut(s) 162
BsoBI CYCGRG 1 cut(s) 756
Bsp143I GATC 6 cut(s) 15, 517, 846, 915, 970, 1036
BspACI CCGC 5 cut(s) 91, 172, 180, 498, 675
BspANI GGCC 1 cut(s) 162
BspCNI CTCAG 3 cut(s) 285, 322, 775
BspFNI CGCG 1 cut(s) 121
BspLI GGNNCC 3 cut(s) 170, 972, 1194
BspMAI CTGCAG 1 cut(s) 898
BspPI GGATC 3 cut(s) 10, 965, 978
BspT107I GGYRCC 2 cut(s) 168, 1192
BsrI ACTGG 2 cut(s) 24, 868
BssECI CCNNGG 4 cut(s) 586, 631, 642, 974
BssMI GATC 6 cut(s) 15, 517, 846, 915, 970, 1036
BssNI GRCGYC 2 cut(s) 169, 1193
BssT1I CCWWGG 1 cut(s) 974
Bst2UI CCWGG 3 cut(s) 643, 1076, 1119
Bst4CI ACNGT 4 cut(s) 262, 668, 703, 1189
Bst6I CTCTTC 2 cut(s) 249, 271
BstACI GRCGYC 2 cut(s) 169, 1193
BstDEI CTNAG 3 cut(s) 293, 309, 783
BstDSI CCRYGG 1 cut(s) 631
BstF5I GGATG 4 cut(s) 638, 671, 696, 783
BstFNI CGCG 1 cut(s) 121
BstH2I RGCGCY 3 cut(s) 172, 331, 1196
BstHHI GCGC 4 cut(s) 123, 171, 330, 1195
BstKTI GATC 6 cut(s) 18, 520, 849, 918, 973, 1039
BstMAI GTCTC 1 cut(s) 268
BstMBI GATC 6 cut(s) 15, 517, 846, 915, 970, 1036
BstMWI GCNNNNNNNGC 7 cut(s) 88, 118, 168, 177, 183, 186, 644
BstNI CCWGG 3 cut(s) 643, 1076, 1119
BstSCI CCNGG 3 cut(s) 641, 1074, 1117
BstSFI CTRYAG 1 cut(s) 894
BstUI CGCG 1 cut(s) 121
BstV1I GCAGC 8 cut(s) 161, 164, 173, 329, 866, 880, 908, 1184
BstV2I GAAGAC 3 cut(s) 342, 400, 989
BstX2I RGATCY 3 cut(s) 15, 970, 1036
BstYI RGATCY 3 cut(s) 15, 970, 1036
BsuI GTATCC 1 cut(s) 758
BsuRI GGCC 1 cut(s) 162
BtgI CCRYGG 1 cut(s) 631
BtgZI GCGATG 1 cut(s) 63
BtsCI GGATG 4 cut(s) 638, 671, 696, 783
BtsIMutI CAGTG 3 cut(s) 258, 1050, 1194
CaiI CAGNNNCTG 2 cut(s) 863, 890
CfoI GCGC 4 cut(s) 123, 171, 330, 1195
CsiI ACCWGGT 1 cut(s) 1117
CviAII CATG 3 cut(s) 1054, 1176, 1203
DdeI CTNAG 3 cut(s) 293, 309, 783
DinI GGCGCC 2 cut(s) 170, 1194
DpnI GATC 6 cut(s) 17, 519, 848, 917, 972, 1038
DpnII GATC 6 cut(s) 15, 517, 846, 915, 970, 1036
DraIII CACNNNGTG 1 cut(s) 905
Eam1104I CTCTTC 2 cut(s) 249, 271
EarI CTCTTC 2 cut(s) 249, 271
Eco130I CCWWGG 1 cut(s) 974
Eco32I GATATC 1 cut(s) 323
Eco47III AGCGCT 1 cut(s) 329
Eco88I CYCGRG 1 cut(s) 756
EcoRI GAATTC 2 cut(s) 709, 1180
EcoRII CCWGG 3 cut(s) 641, 1074, 1117
EcoRV GATATC 1 cut(s) 323
EcoT14I CCWWGG 1 cut(s) 974
EgeI GGCGCC 2 cut(s) 170, 1194
EheI GGCGCC 2 cut(s) 170, 1194
ErhI CCWWGG 1 cut(s) 974
FaeI CATG 3 cut(s) 1057, 1179, 1206
FatI CATG 3 cut(s) 1053, 1175, 1202
FauI CCCGC 1 cut(s) 84
Fnu4HI GCNGC 9 cut(s) 172, 175, 178, 187, 343, 855, 894, 897, 1173
FokI GGATG 4 cut(s) 625, 658, 703, 790
Fsp4HI GCNGC 9 cut(s) 172, 175, 178, 187, 343, 855, 894, 897, 1173
FspBI CTAG 1 cut(s) 975
GlaI GCGC 4 cut(s) 122, 170, 329, 1194
GluI GCNGC 9 cut(s) 172, 175, 178, 187, 343, 855, 894, 897, 1173
GsaI CCCAGC 1 cut(s) 450
GsuI CTGGAG 1 cut(s) 7
HaeII RGCGCY 3 cut(s) 172, 331, 1196
HaeIII GGCC 1 cut(s) 162
HapII CCGG 4 cut(s) 88, 316, 366, 513
HhaI GCGC 4 cut(s) 123, 171, 330, 1195
Hin1I GRCGYC 2 cut(s) 169, 1193
Hin1II CATG 3 cut(s) 1057, 1179, 1206
Hin6I GCGC 4 cut(s) 121, 169, 328, 1193
HinP1I GCGC 4 cut(s) 121, 169, 328, 1193
HinfI GANTC 4 cut(s) 362, 374, 418, 580
HpaII CCGG 4 cut(s) 88, 316, 366, 513
HphI GGTGA 2 cut(s) 442, 1036
Hpy166II GTNNAC 1 cut(s) 961
Hpy188I TCNGA 8 cut(s) 65, 255, 294, 312, 355, 373, 777, 784
Hpy188III TCNNGA 6 cut(s) 456, 662, 688, 827, 1001, 1019
Hpy8I GTNNAC 1 cut(s) 961
Hpy99I CGWCG 1 cut(s) 810
HpyAV CCTTC 4 cut(s) 471, 535, 804, 1144
HpyCH4III ACNGT 4 cut(s) 262, 668, 703, 1189
HpyCH4IV ACGT 2 cut(s) 805, 1160
HpyF10VI GCNNNNNNNGC 7 cut(s) 88, 118, 168, 177, 183, 186, 644
HpyF3I CTNAG 3 cut(s) 293, 309, 783
HpySE526I ACGT 2 cut(s) 805, 1160
Hsp92I GRCGYC 2 cut(s) 169, 1193
Hsp92II CATG 3 cut(s) 1057, 1179, 1206
HspAI GCGC 4 cut(s) 121, 169, 328, 1193
KasI GGCGCC 2 cut(s) 168, 1192
Kzo9I GATC 6 cut(s) 15, 517, 846, 915, 970, 1036
LmnI GCTCC 1 cut(s) 635
Lsp1109I GCAGC 8 cut(s) 161, 164, 173, 329, 866, 880, 908, 1184
LweI GCATC 3 cut(s) 581, 647, 832
MabI ACCWGGT 1 cut(s) 1117
MaeI CTAG 1 cut(s) 975
MaeII ACGT 2 cut(s) 805, 1160
MaeIII GTNAC 6 cut(s) 430, 544, 577, 980, 1024, 1121
MalI GATC 6 cut(s) 17, 519, 848, 917, 972, 1038
MboI GATC 6 cut(s) 15, 517, 846, 915, 970, 1036
MboII GAAGA 8 cut(s) 236, 258, 261, 264, 267, 342, 405, 989
MflI RGATCY 3 cut(s) 15, 970, 1036
MluCI AATT 6 cut(s) 143, 555, 709, 1086, 1164, 1180
Mly113I GGCGCC 2 cut(s) 169, 1193
MlyI GAGTC 4 cut(s) 356, 368, 412, 574
MmeI TCCRAC 1 cut(s) 88
MroXI GAANNNNTTC 1 cut(s) 397
MseI TTAA 5 cut(s) 38, 146, 206, 489, 1163
MslI CAYNNNNRTG 1 cut(s) 689
MspA1I CMGCKG 2 cut(s) 174, 677
MspI CCGG 4 cut(s) 88, 316, 366, 513
MspR9I CCNGG 3 cut(s) 643, 1076, 1119
MvaI CCWGG 3 cut(s) 643, 1076, 1119
MvnI CGCG 1 cut(s) 121
MwoI GCNNNNNNNGC 7 cut(s) 88, 118, 168, 177, 183, 186, 644
NarI GGCGCC 2 cut(s) 169, 1193
NdeII GATC 6 cut(s) 15, 517, 846, 915, 970, 1036
NlaIII CATG 3 cut(s) 1057, 1179, 1206
NlaIV GGNNCC 3 cut(s) 170, 972, 1194
NmeAIII GCCGAG 1 cut(s) 567
NmuCI GTSAC 3 cut(s) 430, 577, 1024
PdmI GAANNNNTTC 1 cut(s) 397
PkrI GCNGC 9 cut(s) 173, 176, 179, 188, 344, 856, 895, 898, 1174
PleI GAGTC 4 cut(s) 356, 368, 412, 574
PluTI GGCGCC 2 cut(s) 172, 1196
PpsI GAGTC 4 cut(s) 356, 368, 412, 574
PsiI TTATAA 1 cut(s) 468
Psp6I CCWGG 3 cut(s) 641, 1074, 1117
PspFI CCCAGC 1 cut(s) 446
PspGI CCWGG 3 cut(s) 641, 1074, 1117
PspN4I GGNNCC 3 cut(s) 170, 972, 1194
PsrI GAACNNNNNNTAC 2 cut(s) 786, 818
PstI CTGCAG 1 cut(s) 898
PstNI CAGNNNCTG 2 cut(s) 863, 890
PsuI RGATCY 3 cut(s) 15, 970, 1036
RseI CAYNNNNRTG 1 cut(s) 689
SaqAI TTAA 5 cut(s) 38, 146, 206, 489, 1163
SatI GCNGC 9 cut(s) 172, 175, 178, 187, 343, 855, 894, 897, 1173
Sau3AI GATC 6 cut(s) 15, 517, 846, 915, 970, 1036
SchI GAGTC 4 cut(s) 356, 368, 412, 574
ScrFI CCNGG 3 cut(s) 643, 1076, 1119
SexAI ACCWGGT 1 cut(s) 1117
SfaNI GCATC 3 cut(s) 581, 647, 832
SfcI CTRYAG 1 cut(s) 894
SfoI GGCGCC 2 cut(s) 170, 1194
SmiMI CAYNNNNRTG 1 cut(s) 689
SmlI CTYRAG 1 cut(s) 11
SmoI CTYRAG 1 cut(s) 11
Sse9I AATT 6 cut(s) 143, 555, 709, 1086, 1164, 1180
SsiI CCGC 5 cut(s) 91, 172, 180, 498, 675
SspDI GGCGCC 2 cut(s) 168, 1192
SspI AATATT 2 cut(s) 532, 717
SspMI CTAG 1 cut(s) 975
StyD4I CCNGG 3 cut(s) 641, 1074, 1117
StyI CCWWGG 1 cut(s) 974
TaaI ACNGT 4 cut(s) 262, 668, 703, 1189
TaiI ACGT 2 cut(s) 808, 1163
TaqI TCGA 2 cut(s) 808, 951
TasI AATT 6 cut(s) 143, 555, 709, 1086, 1164, 1180
TauI GCSGC 1 cut(s) 174
Tru1I TTAA 5 cut(s) 38, 146, 206, 489, 1163
Tru9I TTAA 5 cut(s) 38, 146, 206, 489, 1163
TscAI CASTG 3 cut(s) 265, 1050, 1194
TseFI GTSAC 3 cut(s) 430, 577, 1024
TseI GCWGC 8 cut(s) 174, 177, 186, 342, 854, 893, 896, 1172
Tsp45I GTSAC 3 cut(s) 430, 577, 1024
TspDTI ATGAA 5 cut(s) 181, 452, 456, 660, 722
TspGWI ACGGA 1 cut(s) 620
TspRI CASTG 3 cut(s) 265, 1050, 1194
XapI RAATTY 3 cut(s) 709, 1086, 1180
XcmI CCANNNNNNNNNTGG 1 cut(s) 468
XmaJI CCTAGG 1 cut(s) 974
XmnI GAANNNNTTC 1 cut(s) 397
XspI CTAG 1 cut(s) 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.