MD01G1028700.v1.1

Xyloglucan galactosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0002083
Physical Location & Seq
Reverse (-)
10598170 .. 10599603
1434 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1028700.v1.1.491

Sequence Viewer

Length: 1434 bp
ATGTTTTCTCAATATCAAAGACCTCCCTCTCTAATCAAGAGCGGTGGTTTCCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTTTCTTTCTATCAGCTGTTTGGCTCATCTTTTGTTATCCATTCTCTCACACTGAAAATCTTATCCCACAACTACAACATGAATTACCACAACAACATCAGCACGAGCACCCTCTTCCTAACAAAACCCACCACCGCCACGACGGCGACATTAGAACAAGCAATTCACAATTGACTACAGCTGCCACTTGCGACAAAAACATTTCAGTGTACGTATACAATTTGCCGGCAGAGTTCAACTTCGGCCTCCTTGATCACTGCCACAACCTAAACGTGCACACGGACATGTGTCCCCATGTGGCAAACTCCGGACTCGGCCAGCCACTTTTCAACAACAGCGGCGGCTGGTTCGCCACCAACCAGTTCACAGCTGAGATGATTTTCCACGCACGCGTCGAAAACCATCCCTGTCGCACGTGGGATCCCGCACGTGCTACCCTCTTCTACGTACCTTACTACGGCGGCCTTCACGTTTCGAACAAGTTCCGCGAACGGAACCTGACGGCTCGAGATGAGCTGGACGTCAGTCTCGTTGACTTTATTCAATCCCAGCCTTGGTGGCAAAAGCATAATGGTAAGGACCATTTTATGGCCCTAGGGAGGATCGTACGGGATTTTACCCGGAACAGCGGCGACCGCGACTATGGAGCCGGCCGTCTTCTAAATTTTCCGGCTGTAAAAACCATGTCGTTCTTGATCATAGAAAGACATCCGAGCAATGGGACAAACCAGTACGGTATACCCTACCCTTCTTATTTTCACCCGTCCACGTGGCGGGAAATGATAAGGTGGCAGAACAAGGTGAGGAGATTCAAGCGACCCTACTTGTTTTCCTTCATTGGCGCGCCCCGAAGGAAGGCGGCAATTAGGAACCAATTTATAAGGCAATGCGGTGAGTCGGCTCGCTGCAATCTCTTGAACTGCGGGACGCCGGACGGGCGTAGCAAGTGCAGGCAGCCAAGTGAGGTGCTGAGGGTGATGACGGAGTCCAGGTTCTGCTTGCAAGCACCGGGTGACTCGTTCACACGGCGGTCGACGTTTGACTCGGTGCTTGCGGGTTGCATACCTGTTTTCTTCTCGCCCCACTCGGCGTACACGCAGTATGCGTGGTTTTTACCGGAGGATAGAAGCTCCTACTCGGTTTACATAGATGAGAAGAGCAAAGCAGCTAGAAGAATAGAGAAGGAGCTCATGAAAGTTTCGAGCAAGAAGGTGATGATGATGCGTGAAAAGCTTATAGATTTAATCCCAAGTCTCACGTATGCTCACCCCAATGGGACTAATTTTGGGTTTGGGGATGCAGTTGATGTTGCACTTGTATCATTGGCCAAGCATGTCAATATAATCATTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

478

Amino Acids

55.09

Weight (kDa)

9.34

Isoelectric Point (pI)

43.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 92 - 413 1.8e-72 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 959
AatII GACGTC 1 cut(s) 603
AccB7I CCANNNNNTGG 1 cut(s) 667
AccBSI CCGCTC 1 cut(s) 42
AccI GTMKAC 3 cut(s) 294, 817, 1112
AccII CGCG 4 cut(s) 471, 567, 717, 923
AccIII TCCGGA 1 cut(s) 386
AclWI GGATC 3 cut(s) 494, 507, 689
AcoI YGGCCR 3 cut(s) 394, 730, 1404
AcsI RAATTY 1 cut(s) 742
AcvI CACGTG 3 cut(s) 495, 509, 849
AcyI GRCGYC 2 cut(s) 600, 1007
AdeI CACNNNGTG 1 cut(s) 1091
AfaI GTAC 5 cut(s) 290, 528, 687, 812, 1172
AfiI CCNNNNNNNGG 7 cut(s) 536, 633, 667, 678, 797, 852, 934
AflIII ACRYGT 2 cut(s) 363, 469
AgsI TTSAA 5 cut(s) 316, 409, 623, 892, 997
AjnI CCWGG 1 cut(s) 1067
AloI GAACNNNNNNTCC 2 cut(s) 1055, 1087
AluBI AGCT 8 cut(s) 95, 260, 449, 595, 1209, 1247, 1267, 1312
AluI AGCT 8 cut(s) 95, 260, 449, 595, 1209, 1247, 1267, 1312
Alw21I GWGCWC 3 cut(s) 189, 357, 1269
Alw26I GTCTC 2 cut(s) 611, 1337
Alw44I GTGCAC 1 cut(s) 353
AlwI GGATC 3 cut(s) 494, 507, 689
AlwNI CAGNNNCTG 1 cut(s) 1074
Ama87I CYCGRG 1 cut(s) 585
Aor13HI TCCGGA 1 cut(s) 386
AoxI GGCC 6 cut(s) 322, 394, 541, 669, 730, 1404
ApaLI GTGCAC 1 cut(s) 353
ApeKI GCWGC 4 cut(s) 260, 984, 1033, 1244
ApoI RAATTY 1 cut(s) 742
AscI GGCGCGCC 1 cut(s) 921
Asp700I GAANNNNTTC 1 cut(s) 560
AspA2I CCTAGG 1 cut(s) 673
AspLEI GCGC 2 cut(s) 923, 925
AspS9I GGNCC 2 cut(s) 658, 670
AsuC2I CCSGG 2 cut(s) 700, 1089
AsuHPI GGTGA 7 cut(s) 830, 892, 983, 1066, 1103, 1303, 1337
AsuII TTCGAA 1 cut(s) 554
AvaI CYCGRG 1 cut(s) 585
AvaII GGWCC 1 cut(s) 658
AvrII CCTAGG 1 cut(s) 673
BaeGI GKGCMC 1 cut(s) 357
BalI TGGCCA 1 cut(s) 1406
BamHI GGATCC 1 cut(s) 499
BanII GRGCYC 1 cut(s) 1269
BauI CACGAG 1 cut(s) 182
BbrPI CACGTG 3 cut(s) 495, 509, 849
BbsI GAAGAC 1 cut(s) 728
Bbv12I GWGCWC 3 cut(s) 189, 357, 1269
BbvCI CCTCAGC 1 cut(s) 1049
BbvI GCAGC 4 cut(s) 247, 971, 1045, 1256
BccI CCATC 1 cut(s) 489
BceAI ACGGC 5 cut(s) 238, 553, 597, 717, 1121
BciT130I CCWGG 1 cut(s) 1069
BclI TGATCA 2 cut(s) 331, 774
BcnI CCSGG 2 cut(s) 700, 1089
BcoDI GTCTC 2 cut(s) 611, 1337
BfaI CTAG 2 cut(s) 674, 1248
BfmI CTRYAG 1 cut(s) 255
BglI GCCNNNNNGGC 3 cut(s) 222, 637, 1015
BisI GCNGC 9 cut(s) 261, 418, 421, 541, 709, 939, 985, 1034, 1245
BlnI CCTAGG 1 cut(s) 673
BlsI GCNGC 9 cut(s) 262, 419, 422, 542, 710, 940, 986, 1035, 1246
Bme1390I CCNGG 3 cut(s) 700, 1069, 1089
Bme18I GGWCC 1 cut(s) 658
BmeT110I CYCGRG 1 cut(s) 585
BmgT120I GGNCC 2 cut(s) 658, 670
BmiI GGNNCC 4 cut(s) 501, 575, 727, 950
BmrFI CCNGG 3 cut(s) 700, 1069, 1089
BmsI GCATC 2 cut(s) 1290, 1366
BoxI GACNNNNGTC 2 cut(s) 366, 603
BpiI GAAGAC 1 cut(s) 728
Bpu10I CCTNAGC 1 cut(s) 1049
Bpu14I TTCGAA 1 cut(s) 554
BpuMI CCSGG 2 cut(s) 700, 1089
BsaAI YACGTR 6 cut(s) 292, 495, 509, 526, 849, 1338
BsaHI GRCGYC 2 cut(s) 600, 1007
BsaJI CCNNGG 2 cut(s) 632, 673
BsaWI WCCGGW 2 cut(s) 386, 1195
BsaXI ACNNNNNCTCC 2 cut(s) 1055, 1085
Bsc4I CCNNNNNNNGG 7 cut(s) 536, 633, 667, 678, 797, 852, 934
Bse118I RCCGGY 2 cut(s) 304, 728
Bse1I ACTGG 2 cut(s) 439, 808
Bse3DI GCAATG 2 cut(s) 802, 971
BseAI TCCGGA 1 cut(s) 386
BseBI CCWGG 1 cut(s) 1069
BseDI CCNNGG 2 cut(s) 632, 673
BseGI GGATG 3 cut(s) 481, 787, 1381
BseLI CCNNNNNNNGG 7 cut(s) 536, 633, 667, 678, 797, 852, 934
BseMI GCAATG 2 cut(s) 802, 971
BseMII CTCAG 2 cut(s) 441, 1040
BseNI ACTGG 2 cut(s) 439, 808
BsePI GCGCGC 1 cut(s) 921
BseRI GAGGAG 1 cut(s) 898
BseSI GKGCMC 1 cut(s) 357
BseX3I CGGCCG 1 cut(s) 730
BseXI GCAGC 4 cut(s) 247, 971, 1045, 1256
BseYI CCCAGC 1 cut(s) 627
BsgI GTGCAG 1 cut(s) 1048
Bsh1236I CGCG 4 cut(s) 471, 567, 717, 923
Bsh1285I CGRYCG 3 cut(s) 715, 733, 1112
BshFI GGCC 6 cut(s) 324, 396, 543, 671, 732, 1406
BsiEI CGRYCG 3 cut(s) 715, 733, 1112
BsiHKAI GWGCWC 3 cut(s) 189, 357, 1269
BsiHKCI CYCGRG 1 cut(s) 585
BsiSI CCGG 8 cut(s) 305, 387, 700, 729, 749, 1010, 1088, 1196
BsiWI CGTACG 1 cut(s) 685
BslFI GGGAC 4 cut(s) 354, 814, 1018, 1369
BslI CCNNNNNNNGG 7 cut(s) 536, 633, 667, 678, 797, 852, 934
BsmAI GTCTC 2 cut(s) 611, 1337
BsmFI GGGAC 4 cut(s) 354, 814, 1018, 1369
BsnI GGCC 6 cut(s) 324, 396, 543, 671, 732, 1406
BsoBI CYCGRG 1 cut(s) 585
Bsp119I TTCGAA 1 cut(s) 554
Bsp1286I GDGCHC 3 cut(s) 189, 357, 1269
Bsp13I TCCGGA 1 cut(s) 386
Bsp143I GATC 4 cut(s) 331, 499, 681, 774
BspANI GGCC 6 cut(s) 324, 396, 543, 671, 732, 1406
BspCNI CTCAG 2 cut(s) 442, 1041
BspEI TCCGGA 1 cut(s) 386
BspFNI CGCG 4 cut(s) 471, 567, 717, 923
BspHI TCATGA 1 cut(s) 1269
BspLI GGNNCC 4 cut(s) 501, 575, 727, 950
BspPI GGATC 3 cut(s) 494, 507, 689
BspQI GCTCTTC 1 cut(s) 1229
BspT104I TTCGAA 1 cut(s) 554
BsrBI CCGCTC 1 cut(s) 42
BsrDI GCAATG 2 cut(s) 802, 971
BsrFI RCCGGY 2 cut(s) 304, 728
BsrI ACTGG 2 cut(s) 439, 808
BssAI RCCGGY 2 cut(s) 304, 728
BssECI CCNNGG 2 cut(s) 632, 673
BssHII GCGCGC 1 cut(s) 921
BssMI GATC 4 cut(s) 331, 499, 681, 774
BssNAI GTATAC 2 cut(s) 295, 818
BssNI GRCGYC 2 cut(s) 600, 1007
BssSI CACGAG 1 cut(s) 182
BssT1I CCWWGG 2 cut(s) 632, 673
Bst1107I GTATAC 2 cut(s) 295, 818
Bst2BI CACGAG 1 cut(s) 182
Bst2UI CCWGG 1 cut(s) 1069
Bst4CI ACNGT 1 cut(s) 815
Bst6I CTCTTC 3 cut(s) 198, 524, 1229
BstACI GRCGYC 2 cut(s) 600, 1007
BstBAI YACGTR 6 cut(s) 292, 495, 509, 526, 849, 1338
BstBI TTCGAA 1 cut(s) 554
BstDEI CTNAG 2 cut(s) 450, 1049
BstF5I GGATG 3 cut(s) 481, 787, 1381
BstFNI CGCG 4 cut(s) 471, 567, 717, 923
BstHHI GCGC 2 cut(s) 923, 925
BstKTI GATC 4 cut(s) 334, 502, 684, 777
BstMAI GTCTC 2 cut(s) 611, 1337
BstMBI GATC 4 cut(s) 331, 499, 681, 774
BstMCI CGRYCG 3 cut(s) 715, 733, 1112
BstMWI GCNNNNNNNGC 5 cut(s) 222, 637, 714, 1015, 1309
BstNI CCWGG 1 cut(s) 1069
BstNSI RCATGY 2 cut(s) 367, 1415
BstPAI GACNNNNGTC 2 cut(s) 366, 603
BstSCI CCNGG 3 cut(s) 698, 1067, 1087
BstSFI CTRYAG 1 cut(s) 255
BstSLI GKGCMC 1 cut(s) 357
BstSNI TACGTA 2 cut(s) 292, 526
BstUI CGCG 4 cut(s) 471, 567, 717, 923
BstV1I GCAGC 4 cut(s) 247, 971, 1045, 1256
BstV2I GAAGAC 1 cut(s) 728
BstX2I RGATCY 1 cut(s) 499
BstYI RGATCY 1 cut(s) 499
BstZ17I GTATAC 2 cut(s) 295, 818
BstZI CGGCCG 1 cut(s) 730
BsuRI GGCC 6 cut(s) 324, 396, 543, 671, 732, 1406
BtsCI GGATG 3 cut(s) 481, 787, 1381
BtsI GCAGTG 1 cut(s) 334
BtsIMutI CAGTG 3 cut(s) 129, 291, 334
CaiI CAGNNNCTG 1 cut(s) 1074
CciI TCATGA 1 cut(s) 1269
CfoI GCGC 2 cut(s) 923, 925
Cfr10I RCCGGY 2 cut(s) 304, 728
Cfr13I GGNCC 2 cut(s) 658, 670
CseI GACGC 2 cut(s) 460, 1015
Csp6I GTAC 5 cut(s) 289, 527, 686, 811, 1171
CspCI CAANNNNNGTGG 2 cut(s) 25, 60
CviAII CATG 6 cut(s) 158, 364, 374, 763, 1270, 1412
CviQI GTAC 5 cut(s) 289, 527, 686, 811, 1171
DdeI CTNAG 2 cut(s) 450, 1049
DpnI GATC 4 cut(s) 333, 501, 683, 776
DpnII GATC 4 cut(s) 331, 499, 681, 774
DraIII CACNNNGTG 1 cut(s) 1091
EaeI YGGCCR 3 cut(s) 394, 730, 1404
EagI CGGCCG 1 cut(s) 730
Eam1104I CTCTTC 3 cut(s) 198, 524, 1229
EarI CTCTTC 3 cut(s) 198, 524, 1229
Ecl136II GAGCTC 1 cut(s) 1267
EclXI CGGCCG 1 cut(s) 730
Eco105I TACGTA 2 cut(s) 292, 526
Eco130I CCWWGG 2 cut(s) 632, 673
Eco24I GRGCYC 1 cut(s) 1269
Eco47I GGWCC 1 cut(s) 658
Eco52I CGGCCG 1 cut(s) 730
Eco53kI GAGCTC 1 cut(s) 1267
Eco72I CACGTG 3 cut(s) 495, 509, 849
Eco88I CYCGRG 1 cut(s) 585
EcoICRI GAGCTC 1 cut(s) 1267
EcoRII CCWGG 1 cut(s) 1067
EcoT14I CCWWGG 2 cut(s) 632, 673
EcoT38I GRGCYC 1 cut(s) 1269
ErhI CCWWGG 2 cut(s) 632, 673
FaeI CATG 6 cut(s) 161, 367, 377, 766, 1273, 1415
FaqI GGGAC 4 cut(s) 354, 814, 1018, 1369
FatI CATG 6 cut(s) 157, 363, 373, 762, 1269, 1411
FauI CCCGC 4 cut(s) 511, 846, 995, 1126
FbaI TGATCA 2 cut(s) 331, 774
FblI GTMKAC 3 cut(s) 294, 817, 1112
Fnu4HI GCNGC 9 cut(s) 261, 418, 421, 541, 709, 939, 985, 1034, 1245
FokI GGATG 3 cut(s) 468, 774, 1388
FriOI GRGCYC 1 cut(s) 1269
Fsp4HI GCNGC 9 cut(s) 261, 418, 421, 541, 709, 939, 985, 1034, 1245
FspBI CTAG 2 cut(s) 674, 1248
GlaI GCGC 2 cut(s) 922, 924
GluI GCNGC 9 cut(s) 261, 418, 421, 541, 709, 939, 985, 1034, 1245
GsaI CCCAGC 1 cut(s) 631
HaeIII GGCC 6 cut(s) 324, 396, 543, 671, 732, 1406
HapII CCGG 8 cut(s) 305, 387, 700, 729, 749, 1010, 1088, 1196
HgaI GACGC 2 cut(s) 460, 1015
HhaI GCGC 2 cut(s) 923, 925
Hin1I GRCGYC 2 cut(s) 600, 1007
Hin1II CATG 6 cut(s) 161, 367, 377, 766, 1273, 1415
Hin6I GCGC 2 cut(s) 921, 923
HinP1I GCGC 2 cut(s) 921, 923
HincII GTYRAC 2 cut(s) 613, 1113
HindII GTYRAC 2 cut(s) 613, 1113
HindIII AAGCTT 1 cut(s) 1310
HinfI GANTC 6 cut(s) 390, 888, 974, 1064, 1094, 1121
HpaII CCGG 8 cut(s) 305, 387, 700, 729, 749, 1010, 1088, 1196
HphI GGTGA 7 cut(s) 830, 892, 983, 1066, 1103, 1303, 1337
Hpy188I TCNGA 2 cut(s) 792, 1433
Hpy188III TCNNGA 6 cut(s) 37, 387, 587, 772, 994, 1270
Hpy99I CGWCG 3 cut(s) 224, 476, 1117
HpyAV CCTTC 7 cut(s) 554, 837, 922, 924, 928, 1255, 1282
HpyCH4III ACNGT 1 cut(s) 815
HpyCH4V TGCA 7 cut(s) 355, 987, 1029, 1081, 1140, 1379, 1391
HpyF10VI GCNNNNNNNGC 5 cut(s) 222, 637, 714, 1015, 1309
HpyF3I CTNAG 2 cut(s) 450, 1049
Hsp92I GRCGYC 2 cut(s) 600, 1007
Hsp92II CATG 6 cut(s) 161, 367, 377, 766, 1273, 1415
HspAI GCGC 2 cut(s) 921, 923
Kpn2I TCCGGA 1 cut(s) 386
KroI GCCGGC 2 cut(s) 304, 728
KroNI GCCGGC 2 cut(s) 306, 730
Ksp22I TGATCA 2 cut(s) 331, 774
Kzo9I GATC 4 cut(s) 331, 499, 681, 774
LguI GCTCTTC 1 cut(s) 1229
LmnI GCTCC 3 cut(s) 725, 1214, 1264
Lsp1109I GCAGC 4 cut(s) 247, 971, 1045, 1256
LweI GCATC 2 cut(s) 1290, 1366
MaeI CTAG 2 cut(s) 674, 1248
MaeIII GTNAC 1 cut(s) 1091
MalI GATC 4 cut(s) 333, 501, 683, 776
MbiI CCGCTC 1 cut(s) 42
MboI GATC 4 cut(s) 331, 499, 681, 774
MboII GAAGA 6 cut(s) 185, 511, 728, 1144, 1246, 1263
MfeI CAATTG 1 cut(s) 248
MflI RGATCY 1 cut(s) 499
MhlI GDGCHC 3 cut(s) 189, 357, 1269
MlsI TGGCCA 1 cut(s) 1406
MluCI AATT 8 cut(s) 161, 241, 248, 298, 742, 942, 953, 1360
MluI ACGCGT 1 cut(s) 469
MluNI TGGCCA 1 cut(s) 1406
MlyI GAGTC 5 cut(s) 384, 983, 1073, 1088, 1115
Mox20I TGGCCA 1 cut(s) 1406
MroI TCCGGA 1 cut(s) 386
MroNI GCCGGC 2 cut(s) 304, 728
MroXI GAANNNNTTC 1 cut(s) 560
MscI TGGCCA 1 cut(s) 1406
MseI TTAA 1 cut(s) 1322
MslI CAYNNNNRTG 3 cut(s) 284, 362, 1350
Msp20I TGGCCA 1 cut(s) 1406
MspA1I CMGCKG 5 cut(s) 95, 260, 417, 449, 708
MspI CCGG 8 cut(s) 305, 387, 700, 729, 749, 1010, 1088, 1196
MspR9I CCNGG 3 cut(s) 700, 1069, 1089
MunI CAATTG 1 cut(s) 248
MvaI CCWGG 1 cut(s) 1069
MvnI CGCG 4 cut(s) 471, 567, 717, 923
MwoI GCNNNNNNNGC 5 cut(s) 222, 637, 714, 1015, 1309
NaeI GCCGGC 2 cut(s) 306, 730
NciI CCSGG 2 cut(s) 700, 1089
NdeII GATC 4 cut(s) 331, 499, 681, 774
NgoMIV GCCGGC 2 cut(s) 304, 728
NlaIII CATG 6 cut(s) 161, 367, 377, 766, 1273, 1415
NlaIV GGNNCC 4 cut(s) 501, 575, 727, 950
NmeAIII GCCGAG 2 cut(s) 372, 1145
NmuCI GTSAC 1 cut(s) 1091
NspI RCATGY 2 cut(s) 367, 1415
NspV TTCGAA 1 cut(s) 554
PaeR7I CTCGAG 1 cut(s) 585
PagI TCATGA 1 cut(s) 1269
PalAI GGCGCGCC 1 cut(s) 921
PauI GCGCGC 1 cut(s) 921
PciI ACATGT 1 cut(s) 363
PciSI GCTCTTC 1 cut(s) 1229
PcsI WCGNNNNNNNCGW 3 cut(s) 471, 606, 1181
PdiI GCCGGC 2 cut(s) 306, 730
PdmI GAANNNNTTC 1 cut(s) 560
PfeI GAWTC 1 cut(s) 888
Pfl23II CGTACG 1 cut(s) 685
PflFI GACNNNGTC 1 cut(s) 1063
PflMI CCANNNNNTGG 1 cut(s) 667
PkrI GCNGC 9 cut(s) 262, 419, 422, 542, 710, 940, 986, 1035, 1246
PleI GAGTC 5 cut(s) 384, 982, 1072, 1088, 1115
PmaCI CACGTG 3 cut(s) 495, 509, 849
PmlI CACGTG 3 cut(s) 495, 509, 849
PpsI GAGTC 5 cut(s) 384, 982, 1072, 1088, 1115
Ppu21I YACGTR 6 cut(s) 292, 495, 509, 526, 849, 1338
PscI ACATGT 1 cut(s) 363
PshAI GACNNNNGTC 2 cut(s) 366, 603
PsiI TTATAA 1 cut(s) 959
Psp124BI GAGCTC 1 cut(s) 1269
Psp6I CCWGG 1 cut(s) 1067
PspCI CACGTG 3 cut(s) 495, 509, 849
PspFI CCCAGC 1 cut(s) 627
PspGI CCWGG 1 cut(s) 1067
PspLI CGTACG 1 cut(s) 685
PspN4I GGNNCC 4 cut(s) 501, 575, 727, 950
PspPI GGNCC 2 cut(s) 658, 670
PstNI CAGNNNCTG 1 cut(s) 1074
PsuI RGATCY 1 cut(s) 499
PsyI GACNNNGTC 1 cut(s) 1063
PteI GCGCGC 1 cut(s) 921
PvuII CAGCTG 3 cut(s) 95, 260, 449
RsaI GTAC 5 cut(s) 290, 528, 687, 812, 1172
RsaNI GTAC 5 cut(s) 289, 527, 686, 811, 1171
RseI CAYNNNNRTG 3 cut(s) 284, 362, 1350
SacI GAGCTC 1 cut(s) 1269
SalI GTCGAC 1 cut(s) 1111
SapI GCTCTTC 1 cut(s) 1229
SaqAI TTAA 1 cut(s) 1322
SatI GCNGC 9 cut(s) 261, 418, 421, 541, 709, 939, 985, 1034, 1245
Sau3AI GATC 4 cut(s) 331, 499, 681, 774
Sau96I GGNCC 2 cut(s) 658, 670
SchI GAGTC 5 cut(s) 384, 983, 1073, 1088, 1115
ScrFI CCNGG 3 cut(s) 700, 1069, 1089
SduI GDGCHC 3 cut(s) 189, 357, 1269
SfaNI GCATC 2 cut(s) 1290, 1366
SfcI CTRYAG 1 cut(s) 255
Sfr274I CTCGAG 1 cut(s) 585
SfuI TTCGAA 1 cut(s) 554
SgsI GGCGCGCC 1 cut(s) 921
SinI GGWCC 1 cut(s) 658
SlaI CTCGAG 1 cut(s) 585
SmiMI CAYNNNNRTG 3 cut(s) 284, 362, 1350
SmlI CTYRAG 1 cut(s) 585
SmoI CTYRAG 1 cut(s) 585
SnaBI TACGTA 2 cut(s) 292, 526
Sse9I AATT 8 cut(s) 161, 241, 248, 298, 742, 942, 953, 1360
SspMI CTAG 2 cut(s) 674, 1248
SstI GAGCTC 1 cut(s) 1269
StyD4I CCNGG 3 cut(s) 698, 1067, 1087
StyI CCWWGG 2 cut(s) 632, 673
TaaI ACNGT 1 cut(s) 815
TaqI TCGA 5 cut(s) 474, 554, 586, 1112, 1280
TasI AATT 8 cut(s) 161, 241, 248, 298, 742, 942, 953, 1360
TauI GCSGC 5 cut(s) 420, 423, 543, 711, 941
TfiI GAWTC 1 cut(s) 888
Tru1I TTAA 1 cut(s) 1322
Tru9I TTAA 1 cut(s) 1322
TscAI CASTG 3 cut(s) 136, 291, 341
TseFI GTSAC 1 cut(s) 1091
TseI GCWGC 4 cut(s) 260, 984, 1033, 1244
Tsp45I GTSAC 1 cut(s) 1091
TspDTI ATGAA 3 cut(s) 174, 904, 1286
TspGWI ACGGA 3 cut(s) 374, 586, 1076
TspRI CASTG 3 cut(s) 136, 291, 341
Tth111I GACNNNGTC 1 cut(s) 1063
Van91I CCANNNNNTGG 1 cut(s) 667
VneI GTGCAC 1 cut(s) 353
VpaK11BI GGWCC 1 cut(s) 658
XapI RAATTY 1 cut(s) 742
XceI RCATGY 2 cut(s) 367, 1415
XhoI CTCGAG 1 cut(s) 585
XmaJI CCTAGG 1 cut(s) 673
XmiI GTMKAC 3 cut(s) 294, 817, 1112
XmnI GAANNNNTTC 1 cut(s) 560
XspI CTAG 2 cut(s) 674, 1248
ZraI GACGTC 1 cut(s) 601
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.