Prupe.6G185800_v2.0.a1

Xyloglucan galactosyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
19453955 .. 19454938
984 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G185800.1

Sequence Viewer

Length: 984 bp
ATGATCTTCCACGCACGTGTGGAGAACCATCCCTGCCGCACGCGGGGATCCCCGCGCGTGCCCTCCCCTCTTCTACGTTCCATACGTAGACGGGCCGCCTCACCAAACAAGTTCCGCGAACGTAACCTGACAGCTCGTGATGAGCTGGACGTCAGCCTGGTTGACTTTATCCAAGCGCAGCCTTGGTGGAACAGGCGCAATGGTAAGGACCACTTTATGGCCCTAGGGAGGGTCGTACAAGATTTCATCCGAAAGCCGAACGACCGCGACTACGGAGCCGGCCGCCTCCTAAATCTACCCGCAGTGAAGAACATGTCAGTGTTGATCATAGAGAGACATCCATGGCAAGGAAAGAACCAGTACGGCATCCCTTACCCTTCGTACTTCCACCCGTCCACGCGTCAGGAGATGGCGTGGTGGCAGAACAAGATGAGGAAAGTCCGGCGGCCCTACTTGTTCTCCTTCATTGGCGCCCCCAGAAGGAAGGCGGCTATCAGGAACGAGTTTATAAGGCAATGCGGCGAGTCAACTCGGTGCAAGCTCTTGAACTGCGGGACTCCTGACGGCCGCAGCAAATGCGGCGAGCCTAGTGAGGTGCTGAAGGTTATGACCGAGTCTCGGTTTTGCCTGCAGGCGCCCGGTGACTCGTTTACTCGGCGGTCAACGTTTGACTCGGTGCTTGCGGGTTGCATACCGGTGTTTTTTTCACCTCACTCGGCTTATACTCAGTATGGGTGGTATTTACCTGGAGAGAGAAGCAGTTACTCGGTGTTCATAGATCAGAAAAGCAAAGCGAGTGAGAGAATAGAGGAGGAGCTCATGAAGATTTCGAGTAAAAAGGTTAAGATGATGCGTGAAAAGCTTCTAGGTTTGGTCCCAAGTCTTACTTACGCCCACCCCAATGCGACTAATTCTGGGATTGGGGACGCGGTTGATGTTGCACTTGTATCATTGGCCAAGCAAGTCAACAAAATCATTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

328

Amino Acids

37.52

Weight (kDa)

10.12

Isoelectric Point (pI)

53.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 509
AatII GACGTC 1 cut(s) 153
AccB1I GGYRCC 2 cut(s) 470, 634
AccB7I CCANNNNNTGG 1 cut(s) 217
AccI GTMKAC 1 cut(s) 88
AccII CGCG 7 cut(s) 43, 55, 57, 117, 267, 400, 929
AclI AACGTT 1 cut(s) 665
AclWI GGATC 2 cut(s) 42, 55
AcoI YGGCCR 3 cut(s) 280, 565, 954
AcuI CTGAAG 1 cut(s) 620
AcvI CACGTG 1 cut(s) 17
AcyI GRCGYC 3 cut(s) 150, 471, 635
AfaI GTAC 3 cut(s) 237, 362, 383
AfiI CCNNNNNNNGG 7 cut(s) 43, 217, 228, 229, 347, 480, 618
AflIII ACRYGT 3 cut(s) 16, 312, 398
AgeI ACCGGT 1 cut(s) 694
AgsI TTSAA 1 cut(s) 547
AjnI CCWGG 2 cut(s) 156, 745
AleI CACNNNNGTG 1 cut(s) 15
AluBI AGCT 5 cut(s) 134, 145, 541, 817, 862
AluI AGCT 5 cut(s) 134, 145, 541, 817, 862
Alw21I GWGCWC 1 cut(s) 819
Alw26I GTCTC 2 cut(s) 328, 621
AlwI GGATC 2 cut(s) 42, 55
AoxI GGCC 6 cut(s) 93, 219, 280, 446, 565, 954
ApeKI GCWGC 2 cut(s) 178, 570
AsiGI ACCGGT 1 cut(s) 694
Asp700I GAANNNNTTC 1 cut(s) 861
AspA2I CCTAGG 1 cut(s) 223
AspLEI GCGC 5 cut(s) 57, 178, 198, 473, 637
AspS9I GGNCC 5 cut(s) 93, 208, 220, 447, 874
AsuC2I CCSGG 1 cut(s) 639
AsuHPI GGTGA 3 cut(s) 93, 653, 699
AvaII GGWCC 2 cut(s) 208, 874
AvrII CCTAGG 1 cut(s) 223
BaeGI GKGCMC 1 cut(s) 63
BalI TGGCCA 1 cut(s) 956
BamHI GGATCC 1 cut(s) 47
BanI GGYRCC 2 cut(s) 470, 634
BanII GRGCYC 1 cut(s) 819
BauI CACGAG 1 cut(s) 135
BbrPI CACGTG 1 cut(s) 17
Bbv12I GWGCWC 1 cut(s) 819
BbvI GCAGC 2 cut(s) 190, 582
BccI CCATC 2 cut(s) 36, 403
BceAI ACGGC 2 cut(s) 379, 580
BciT130I CCWGG 2 cut(s) 158, 747
BclI TGATCA 1 cut(s) 324
BcnI CCSGG 1 cut(s) 639
BcoDI GTCTC 2 cut(s) 328, 621
BfaI CTAG 3 cut(s) 224, 588, 866
BfmI CTRYAG 1 cut(s) 629
BfoI RGCGCY 2 cut(s) 474, 638
BlnI CCTAGG 1 cut(s) 223
Bme1390I CCNGG 3 cut(s) 158, 639, 747
Bme18I GGWCC 2 cut(s) 208, 874
BmgT120I GGNCC 5 cut(s) 93, 208, 220, 447, 874
BmiI GGNNCC 5 cut(s) 49, 277, 472, 636, 876
BmrFI CCNGG 3 cut(s) 158, 639, 747
BmsI GCATC 2 cut(s) 375, 840
BpmI CTGGAG 1 cut(s) 768
BpuMI CCSGG 1 cut(s) 639
BsaAI YACGTR 2 cut(s) 17, 86
BsaHI GRCGYC 3 cut(s) 150, 471, 635
BsaJI CCNNGG 3 cut(s) 182, 223, 341
BsaWI WCCGGW 1 cut(s) 694
BsaXI ACNNNNNCTCC 4 cut(s) 398, 428, 443, 473
Bsc4I CCNNNNNNNGG 7 cut(s) 43, 217, 228, 229, 347, 480, 618
Bse118I RCCGGY 2 cut(s) 278, 694
Bse1I ACTGG 1 cut(s) 358
Bse3DI GCAATG 2 cut(s) 205, 521
BseBI CCWGG 2 cut(s) 158, 747
BseDI CCNNGG 3 cut(s) 182, 223, 341
BseGI GGATG 4 cut(s) 28, 246, 337, 366
BseLI CCNNNNNNNGG 7 cut(s) 43, 217, 228, 229, 347, 480, 618
BseMI GCAATG 2 cut(s) 205, 521
BseMII CTCAG 1 cut(s) 740
BseNI ACTGG 1 cut(s) 358
BseRI GAGGAG 2 cut(s) 824, 827
BseSI GKGCMC 1 cut(s) 63
BseX3I CGGCCG 2 cut(s) 280, 565
BseXI GCAGC 2 cut(s) 190, 582
Bsh1236I CGCG 7 cut(s) 43, 55, 57, 117, 267, 400, 929
Bsh1285I CGRYCG 3 cut(s) 265, 283, 568
BshFI GGCC 6 cut(s) 95, 221, 282, 448, 567, 956
BshNI GGYRCC 2 cut(s) 470, 634
BshTI ACCGGT 1 cut(s) 694
BsiEI CGRYCG 3 cut(s) 265, 283, 568
BsiHKAI GWGCWC 1 cut(s) 819
BsiSI CCGG 4 cut(s) 279, 442, 639, 695
BslFI GGGAC 3 cut(s) 568, 860, 938
BslI CCNNNNNNNGG 7 cut(s) 43, 217, 228, 229, 347, 480, 618
BsmAI GTCTC 2 cut(s) 328, 621
BsmFI GGGAC 3 cut(s) 568, 860, 938
BsnI GGCC 6 cut(s) 95, 221, 282, 448, 567, 956
Bsp1286I GDGCHC 2 cut(s) 63, 819
Bsp143I GATC 4 cut(s) 3, 47, 324, 778
Bsp19I CCATGG 1 cut(s) 341
BspANI GGCC 6 cut(s) 95, 221, 282, 448, 567, 956
BspCNI CTCAG 1 cut(s) 739
BspFNI CGCG 7 cut(s) 43, 55, 57, 117, 267, 400, 929
BspHI TCATGA 1 cut(s) 819
BspLI GGNNCC 5 cut(s) 49, 277, 472, 636, 876
BspMAI CTGCAG 1 cut(s) 633
BspPI GGATC 2 cut(s) 42, 55
BspT107I GGYRCC 2 cut(s) 470, 634
BsrDI GCAATG 2 cut(s) 205, 521
BsrFI RCCGGY 2 cut(s) 278, 694
BsrI ACTGG 1 cut(s) 358
BssAI RCCGGY 2 cut(s) 278, 694
BssECI CCNNGG 3 cut(s) 182, 223, 341
BssMI GATC 4 cut(s) 3, 47, 324, 778
BssNI GRCGYC 3 cut(s) 150, 471, 635
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 3 cut(s) 182, 223, 341
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 2 cut(s) 158, 747
Bst6I CTCTTC 1 cut(s) 75
BstACI GRCGYC 3 cut(s) 150, 471, 635
BstAPI GCANNNNNTGC 1 cut(s) 576
BstBAI YACGTR 2 cut(s) 17, 86
BstC8I GCNNGC 8 cut(s) 41, 59, 280, 539, 584, 629, 633, 681
BstDEI CTNAG 1 cut(s) 726
BstDSI CCRYGG 1 cut(s) 341
BstF5I GGATG 4 cut(s) 28, 246, 337, 366
BstFNI CGCG 7 cut(s) 43, 55, 57, 117, 267, 400, 929
BstH2I RGCGCY 2 cut(s) 474, 638
BstHHI GCGC 5 cut(s) 57, 178, 198, 473, 637
BstKTI GATC 4 cut(s) 6, 50, 327, 781
BstMAI GTCTC 2 cut(s) 328, 621
BstMBI GATC 4 cut(s) 3, 47, 324, 778
BstMCI CGRYCG 3 cut(s) 265, 283, 568
BstMWI GCNNNNNNNGC 3 cut(s) 576, 579, 859
BstNI CCWGG 2 cut(s) 158, 747
BstNSI RCATGY 1 cut(s) 316
BstSCI CCNGG 3 cut(s) 156, 637, 745
BstSFI CTRYAG 1 cut(s) 629
BstSLI GKGCMC 1 cut(s) 63
BstSNI TACGTA 1 cut(s) 86
BstUI CGCG 7 cut(s) 43, 55, 57, 117, 267, 400, 929
BstV1I GCAGC 2 cut(s) 190, 582
BstX2I RGATCY 1 cut(s) 47
BstYI RGATCY 1 cut(s) 47
BstZI CGGCCG 2 cut(s) 280, 565
BsuRI GGCC 6 cut(s) 95, 221, 282, 448, 567, 956
BtgI CCRYGG 1 cut(s) 341
BtsCI GGATG 4 cut(s) 28, 246, 337, 366
BtsI GCAGTG 1 cut(s) 309
BtsIMutI CAGTG 2 cut(s) 309, 324
Cac8I GCNNGC 8 cut(s) 41, 59, 280, 539, 584, 629, 633, 681
CciI TCATGA 1 cut(s) 819
CfoI GCGC 5 cut(s) 57, 178, 198, 473, 637
Cfr10I RCCGGY 2 cut(s) 278, 694
Cfr13I GGNCC 5 cut(s) 93, 208, 220, 447, 874
CseI GACGC 2 cut(s) 389, 935
Csp6I GTAC 3 cut(s) 236, 361, 382
CspAI ACCGGT 1 cut(s) 694
CviAII CATG 3 cut(s) 313, 342, 820
CviQI GTAC 3 cut(s) 236, 361, 382
DdeI CTNAG 1 cut(s) 726
DinI GGCGCC 2 cut(s) 472, 636
DpnI GATC 4 cut(s) 5, 49, 326, 780
DpnII GATC 4 cut(s) 3, 47, 324, 778
EaeI YGGCCR 3 cut(s) 280, 565, 954
EagI CGGCCG 2 cut(s) 280, 565
Eam1104I CTCTTC 1 cut(s) 75
EarI CTCTTC 1 cut(s) 75
Ecl136II GAGCTC 1 cut(s) 817
EclXI CGGCCG 2 cut(s) 280, 565
Eco105I TACGTA 1 cut(s) 86
Eco130I CCWWGG 3 cut(s) 182, 223, 341
Eco24I GRGCYC 1 cut(s) 819
Eco47I GGWCC 2 cut(s) 208, 874
Eco52I CGGCCG 2 cut(s) 280, 565
Eco53kI GAGCTC 1 cut(s) 817
Eco57I CTGAAG 1 cut(s) 620
Eco72I CACGTG 1 cut(s) 17
EcoICRI GAGCTC 1 cut(s) 817
EcoRII CCWGG 2 cut(s) 156, 745
EcoT14I CCWWGG 3 cut(s) 182, 223, 341
EcoT38I GRGCYC 1 cut(s) 819
EgeI GGCGCC 2 cut(s) 472, 636
EheI GGCGCC 2 cut(s) 472, 636
ErhI CCWWGG 3 cut(s) 182, 223, 341
FaeI CATG 3 cut(s) 316, 345, 823
FalI AAGNNNNNCTT 4 cut(s) 197, 229, 871, 903
FaqI GGGAC 3 cut(s) 568, 860, 938
FatI CATG 3 cut(s) 312, 341, 819
FauI CCCGC 5 cut(s) 36, 60, 307, 545, 676
FbaI TGATCA 1 cut(s) 324
FblI GTMKAC 1 cut(s) 88
FokI GGATG 4 cut(s) 15, 233, 324, 353
FriOI GRGCYC 1 cut(s) 819
FspBI CTAG 3 cut(s) 224, 588, 866
GlaI GCGC 5 cut(s) 56, 177, 197, 472, 636
GsuI CTGGAG 1 cut(s) 768
HaeII RGCGCY 2 cut(s) 474, 638
HaeIII GGCC 6 cut(s) 95, 221, 282, 448, 567, 956
HapII CCGG 4 cut(s) 279, 442, 639, 695
HgaI GACGC 2 cut(s) 389, 935
HhaI GCGC 5 cut(s) 57, 178, 198, 473, 637
Hin1I GRCGYC 3 cut(s) 150, 471, 635
Hin1II CATG 3 cut(s) 316, 345, 823
Hin6I GCGC 5 cut(s) 55, 176, 196, 471, 635
HinP1I GCGC 5 cut(s) 55, 176, 196, 471, 635
HincII GTYRAC 4 cut(s) 163, 528, 663, 967
HindII GTYRAC 4 cut(s) 163, 528, 663, 967
HindIII AAGCTT 1 cut(s) 860
HinfI GANTC 5 cut(s) 524, 556, 614, 644, 671
HpaII CCGG 4 cut(s) 279, 442, 639, 695
HphI GGTGA 3 cut(s) 93, 653, 699
Hpy166II GTNNAC 7 cut(s) 89, 163, 396, 528, 651, 663, 967
Hpy188I TCNGA 2 cut(s) 251, 783
Hpy188III TCNNGA 6 cut(s) 137, 404, 496, 544, 560, 820
Hpy8I GTNNAC 7 cut(s) 89, 163, 396, 528, 651, 663, 967
HpyAV CCTTC 5 cut(s) 387, 472, 474, 478, 595
HpyCH4IV ACGT 6 cut(s) 16, 76, 85, 121, 150, 665
HpyCH4V TGCA 4 cut(s) 537, 631, 690, 941
HpyF10VI GCNNNNNNNGC 3 cut(s) 576, 579, 859
HpyF3I CTNAG 1 cut(s) 726
HpySE526I ACGT 6 cut(s) 16, 76, 85, 121, 150, 665
Hsp92I GRCGYC 3 cut(s) 150, 471, 635
Hsp92II CATG 3 cut(s) 316, 345, 823
HspAI GCGC 5 cut(s) 55, 176, 196, 471, 635
KasI GGCGCC 2 cut(s) 470, 634
KroI GCCGGC 1 cut(s) 278
KroNI GCCGGC 1 cut(s) 280
Ksp22I TGATCA 1 cut(s) 324
Kzo9I GATC 4 cut(s) 3, 47, 324, 778
LmnI GCTCC 2 cut(s) 275, 814
Lsp1109I GCAGC 2 cut(s) 190, 582
LweI GCATC 2 cut(s) 375, 840
MaeI CTAG 3 cut(s) 224, 588, 866
MaeII ACGT 6 cut(s) 16, 76, 85, 121, 150, 665
MaeIII GTNAC 3 cut(s) 122, 641, 761
MalI GATC 4 cut(s) 5, 49, 326, 780
MboI GATC 4 cut(s) 3, 47, 324, 778
MboII GAAGA 3 cut(s) 62, 319, 835
MflI RGATCY 1 cut(s) 47
MhlI GDGCHC 2 cut(s) 63, 819
MlsI TGGCCA 1 cut(s) 956
MluCI AATT 1 cut(s) 910
MluI ACGCGT 1 cut(s) 398
MluNI TGGCCA 1 cut(s) 956
Mly113I GGCGCC 2 cut(s) 471, 635
MlyI GAGTC 5 cut(s) 533, 550, 623, 638, 665
Mox20I TGGCCA 1 cut(s) 956
MroNI GCCGGC 1 cut(s) 278
MroXI GAANNNNTTC 1 cut(s) 861
MscI TGGCCA 1 cut(s) 956
MseI TTAA 2 cut(s) 843, 978
MslI CAYNNNNRTG 4 cut(s) 15, 317, 695, 900
Msp20I TGGCCA 1 cut(s) 956
MspI CCGG 4 cut(s) 279, 442, 639, 695
MspR9I CCNGG 3 cut(s) 158, 639, 747
MvaI CCWGG 2 cut(s) 158, 747
MvnI CGCG 7 cut(s) 43, 55, 57, 117, 267, 400, 929
MwoI GCNNNNNNNGC 3 cut(s) 576, 579, 859
NaeI GCCGGC 1 cut(s) 280
NarI GGCGCC 2 cut(s) 471, 635
NciI CCSGG 1 cut(s) 639
NcoI CCATGG 1 cut(s) 341
NdeII GATC 4 cut(s) 3, 47, 324, 778
NgoMIV GCCGGC 1 cut(s) 278
NlaIII CATG 3 cut(s) 316, 345, 823
NlaIV GGNNCC 5 cut(s) 49, 277, 472, 636, 876
NmeAIII GCCGAG 2 cut(s) 634, 695
NmuCI GTSAC 1 cut(s) 641
NspI RCATGY 1 cut(s) 316
OliI CACNNNNGTG 1 cut(s) 15
PagI TCATGA 1 cut(s) 819
PciI ACATGT 1 cut(s) 312
PcsI WCGNNNNNNNCGW 1 cut(s) 82
PdiI GCCGGC 1 cut(s) 280
PdmI GAANNNNTTC 1 cut(s) 861
PflFI GACNNNGTC 1 cut(s) 613
PflMI CCANNNNNTGG 1 cut(s) 217
PinAI ACCGGT 1 cut(s) 694
PleI GAGTC 5 cut(s) 532, 550, 622, 638, 665
PluTI GGCGCC 2 cut(s) 474, 638
PmaCI CACGTG 1 cut(s) 17
PmlI CACGTG 1 cut(s) 17
PpsI GAGTC 5 cut(s) 532, 550, 622, 638, 665
Ppu21I YACGTR 2 cut(s) 17, 86
PscI ACATGT 1 cut(s) 312
PsiI TTATAA 1 cut(s) 509
Psp124BI GAGCTC 1 cut(s) 819
Psp1406I AACGTT 1 cut(s) 665
Psp6I CCWGG 2 cut(s) 156, 745
PspCI CACGTG 1 cut(s) 17
PspGI CCWGG 2 cut(s) 156, 745
PspN4I GGNNCC 5 cut(s) 49, 277, 472, 636, 876
PspPI GGNCC 5 cut(s) 93, 208, 220, 447, 874
PstI CTGCAG 1 cut(s) 633
PsuI RGATCY 1 cut(s) 47
PsyI GACNNNGTC 1 cut(s) 613
RsaI GTAC 3 cut(s) 237, 362, 383
RsaNI GTAC 3 cut(s) 236, 361, 382
RseI CAYNNNNRTG 4 cut(s) 15, 317, 695, 900
SacI GAGCTC 1 cut(s) 819
SaqAI TTAA 2 cut(s) 843, 978
Sau3AI GATC 4 cut(s) 3, 47, 324, 778
Sau96I GGNCC 5 cut(s) 93, 208, 220, 447, 874
SbfI CCTGCAGG 1 cut(s) 633
SchI GAGTC 5 cut(s) 533, 550, 623, 638, 665
ScrFI CCNGG 3 cut(s) 158, 639, 747
SdaI CCTGCAGG 1 cut(s) 633
SduI GDGCHC 2 cut(s) 63, 819
SfaNI GCATC 2 cut(s) 375, 840
SfcI CTRYAG 1 cut(s) 629
SfoI GGCGCC 2 cut(s) 472, 636
SinI GGWCC 2 cut(s) 208, 874
SmiMI CAYNNNNRTG 4 cut(s) 15, 317, 695, 900
SnaBI TACGTA 1 cut(s) 86
Sse8387I CCTGCAGG 1 cut(s) 633
Sse9I AATT 1 cut(s) 910
SspDI GGCGCC 2 cut(s) 470, 634
SspMI CTAG 3 cut(s) 224, 588, 866
SstI GAGCTC 1 cut(s) 819
StyD4I CCNGG 3 cut(s) 156, 637, 745
StyI CCWWGG 3 cut(s) 182, 223, 341
TaiI ACGT 6 cut(s) 19, 79, 88, 124, 153, 668
TaqI TCGA 1 cut(s) 830
TaqII GACCGA 1 cut(s) 626
TasI AATT 1 cut(s) 910
TauI GCSGC 8 cut(s) 39, 98, 285, 448, 491, 522, 570, 582
Tru1I TTAA 2 cut(s) 843, 978
Tru9I TTAA 2 cut(s) 843, 978
TscAI CASTG 2 cut(s) 309, 324
TseFI GTSAC 1 cut(s) 641
TseI GCWGC 2 cut(s) 178, 570
Tsp45I GTSAC 1 cut(s) 641
TspDTI ATGAA 4 cut(s) 235, 454, 763, 836
TspGWI ACGGA 1 cut(s) 288
TspRI CASTG 2 cut(s) 309, 324
Tth111I GACNNNGTC 1 cut(s) 613
Van91I CCANNNNNTGG 1 cut(s) 217
VpaK11BI GGWCC 2 cut(s) 208, 874
XceI RCATGY 1 cut(s) 316
XmaJI CCTAGG 1 cut(s) 223
XmiI GTMKAC 1 cut(s) 88
XmnI GAANNNNTTC 1 cut(s) 861
XspI CTAG 3 cut(s) 224, 588, 866
ZraI GACGTC 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.