MD01G1081600.v1.1

Aspartic proteinase CDR1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0013789
Physical Location & Seq
Forward (+)
18832829 .. 18834169
1341 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1081600.v1.1.491

Sequence Viewer

Length: 1341 bp
ATGGCATCAACGCTAATATTCTCCCTCGTTGCACTAATTTCAATCATCACCGTCCCTTCCTCCATGTCTTCTCCTAAAGCATCCGTTAAAGGCTTTGAGGTGCGTCTCATTCACCGCGACTCCCCTGCATCTCCGCTCTACAACCCTAGGGCAACACGTGCTGATCTCATAAAATCATCCGGCCGCAGAACCATAGCGAGACAGAACTACTTCAACTGGCTAATGTCAAATAAAACGTGGAGCAGGTATTCGAGCAGTTACGTCTGGGCGCCTATTGATCAAAGCCCAGGAGATTACATCATGAGGTTTAAAGTCGGCACCCCGGAAGTTGAAACCTTCGGAGTCTTTGACACTGGCAGCCACTTGACTTGGCTGCAGTGTGAGCCTTGTGAGCAGTGTTTCAGTCAAACCATAACAATATACAATCCTGCAAGCTCACAAAGCTATGAGAAGGCCATGTGTGGCTCGGTTGTGTGCAACACAGCCTCAGGTGCCCGCTGCCCTAATCCAAAGGGCGAATGTAAGTATGAGATTAACTATATGGACGGATCATTCACCGAAGGAGACGTTGCCACAGAAACCATCACGCTTGAAGATGATGGATTAAGTGGTAGCATTAGTTTACAAAATATAATCATTGGTTGTGGTCACTCTAATGTTGACACAACTGCAGGATACCCTGCCCCGGGAATTGTCGGTTTAAGTAGACAACCTTCTTCACTTGTTAGCCAGATTCCCTTACATCGTGTTTCATATTGCATACCTTCTAAATATAAAGGTAACCATAGCTCTGTGAGATTTGGCTCAGCGGCAGTAATCAAGGAAGAAGAGACGCAAACTTCGCTTTTGAGCGGTCAATATGGTTTGTACCAGCTAAGCTTAGAAGGGATTAGTATTGATGGAACACTGCTGAATATTTCAAGGTCAGTGTTTGACATGACGGGGGACCGCGGAGGAGTTTTCATGGATTCAGCAACAACTTTTACTTTGCTTGCATTTGATGCTTTTATTGAGTTCAAGTTGGGAATGATGAATGCTTTGTCGGATTTCAAACCAGTGACAGATGTGGATGGACTTTTCCCACTATGTTACGATTATCATAGTGGTTTCAGATTGGATATAACGCCGGAAATTGTGTTCCATTTCACGGGACTAGACTTTCCGTTGGGCGACGAGAACACTTGGATTATGAATTCTGAGGGAAATCTCTGCTTGGCCATGGGCCTAAATGAAGGAAGCTCAGACTATACCATTTTTGGAATGTACCAACAACAAAACGTGAATGTTGGATATGACTTGGACAACAATATTGTATCCCTCAAGTACGGTGACTGTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

447

Amino Acids

48.95

Weight (kDa)

4.82

Isoelectric Point (pI)

40.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 99 - 269 1.4e-42 Xylanase inhibitor N-terminal
TAXi_C PF14541 290 - 438 4e-18 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013789)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G42980
malus_domestica MD01G1081400.v1.1 MD01G1081500.v1.1 MD01G1081600.v1.1 MD01G1081900.v1.1
prunus_persica Prupe.2G189100_v2.0.a1
pyrus_communis pycom07g14880
rosa_chinensis RchiOBHm_Chr1g0359581
rosa_laevigata RLG00000027860
rosa_multiflora Rmu_sc0002556.1_g000022
rosa_roxburghii Rroxscaffold_4G00296910
rosa_samantha Rh1AG285600 Rh1BG251700 Rh1BG251800 Rh1DG280900 Rh1DG281000
rosa_wichuraiana Rw1G025390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 234
AccB1I GGYRCC 3 cut(s) 268, 317, 491
AccBSI CCGCTC 2 cut(s) 136, 852
AccI GTMKAC 1 cut(s) 706
AccII CGCG 2 cut(s) 117, 951
AciI CCGC 8 cut(s) 115, 134, 184, 496, 809, 852, 949, 951
AclWI GGATC 1 cut(s) 556
AcoI YGGCCR 2 cut(s) 181, 1215
AcsI RAATTY 1 cut(s) 1192
AcvI CACGTG 1 cut(s) 158
AcyI GRCGYC 1 cut(s) 269
AfaI GTAC 3 cut(s) 869, 1265, 1325
AfiI CCNNNNNNNGG 3 cut(s) 685, 686, 1147
AflIII ACRYGT 1 cut(s) 155
AgsI TTSAA 7 cut(s) 42, 214, 332, 593, 921, 1018, 1051
AjnI CCWGG 1 cut(s) 286
AloI GAACNNNNNNTCC 2 cut(s) 1121, 1153
AluBI AGCT 6 cut(s) 435, 444, 789, 874, 879, 1239
AluI AGCT 6 cut(s) 435, 444, 789, 874, 879, 1239
Alw26I GTCTC 4 cut(s) 110, 193, 558, 824
AlwI GGATC 1 cut(s) 556
Ama87I CYCGRG 1 cut(s) 685
AoxI GGCC 4 cut(s) 181, 453, 1215, 1222
ApeKI GCWGC 3 cut(s) 357, 373, 498
ApoI RAATTY 1 cut(s) 1192
ArsI GACNNNNNNTTYG 2 cut(s) 823, 855
Asp700I GAANNNNTTC 1 cut(s) 209
AspA2I CCTAGG 1 cut(s) 146
AspLEI GCGC 1 cut(s) 271
AspS9I GGNCC 2 cut(s) 946, 1222
AsuC2I CCSGG 3 cut(s) 323, 686, 687
AsuHPI GGTGA 4 cut(s) 40, 104, 547, 1340
AvaI CYCGRG 1 cut(s) 685
AvaII GGWCC 1 cut(s) 946
AvrII CCTAGG 1 cut(s) 146
AxyI CCTNAGG 1 cut(s) 487
BaeGI GKGCMC 1 cut(s) 496
BalI TGGCCA 1 cut(s) 1217
BanI GGYRCC 3 cut(s) 268, 317, 491
BarI GAAGNNNNNNTAC 2 cut(s) 697, 729
BbrPI CACGTG 1 cut(s) 158
BbsI GAAGAC 1 cut(s) 60
BbvI GCAGC 3 cut(s) 360, 369, 485
BccI CCATC 4 cut(s) 590, 593, 893, 1064
BcgI CGANNNNNNTGC 2 cut(s) 107, 141
BciT130I CCWGG 1 cut(s) 288
BciVI GTATCC 2 cut(s) 668, 1324
BclI TGATCA 1 cut(s) 277
BcnI CCSGG 3 cut(s) 323, 686, 687
BcoDI GTCTC 4 cut(s) 110, 193, 558, 824
BfaI CTAG 2 cut(s) 147, 1154
BfmI CTRYAG 2 cut(s) 374, 669
BfoI RGCGCY 1 cut(s) 272
BfuAI ACCTGC 1 cut(s) 234
BfuI GTATCC 2 cut(s) 668, 1324
BisI GCNGC 5 cut(s) 184, 358, 374, 499, 810
BlnI CCTAGG 1 cut(s) 146
BlpI GCTNAGC 2 cut(s) 805, 875
BlsI GCNGC 5 cut(s) 185, 359, 375, 500, 811
Bme1390I CCNGG 4 cut(s) 288, 323, 686, 687
Bme18I GGWCC 1 cut(s) 946
BmeT110I CYCGRG 1 cut(s) 685
BmgT120I GGNCC 2 cut(s) 946, 1222
BmiI GGNNCC 4 cut(s) 270, 319, 493, 947
BmrFI CCNGG 4 cut(s) 288, 323, 686, 687
BmsI GCATC 4 cut(s) 14, 89, 137, 991
BpiI GAAGAC 1 cut(s) 60
Bpu1102I GCTNAGC 2 cut(s) 805, 875
BpuEI CTTGAG 1 cut(s) 1304
BpuMI CCSGG 3 cut(s) 323, 686, 687
BsaAI YACGTR 1 cut(s) 158
BsaHI GRCGYC 1 cut(s) 269
BsaJI CCNNGG 7 cut(s) 146, 286, 321, 684, 685, 949, 1218
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
Bsc4I CCNNNNNNNGG 3 cut(s) 685, 686, 1147
Bse1I ACTGG 3 cut(s) 221, 358, 1055
Bse21I CCTNAGG 1 cut(s) 487
BseBI CCWGG 1 cut(s) 288
BseDI CCNNGG 7 cut(s) 146, 286, 321, 684, 685, 949, 1218
BseGI GGATG 3 cut(s) 80, 176, 1075
BseLI CCNNNNNNNGG 3 cut(s) 685, 686, 1147
BseMII CTCAG 4 cut(s) 501, 819, 1188, 1254
BseNI ACTGG 3 cut(s) 221, 358, 1055
BseRI GAGGAG 1 cut(s) 969
BseSI GKGCMC 1 cut(s) 496
BseX3I CGGCCG 1 cut(s) 181
BseXI GCAGC 3 cut(s) 360, 369, 485
Bsh1236I CGCG 2 cut(s) 117, 951
Bsh1285I CGRYCG 1 cut(s) 184
BshFI GGCC 4 cut(s) 183, 455, 1217, 1224
BshNI GGYRCC 3 cut(s) 268, 317, 491
BsiEI CGRYCG 1 cut(s) 184
BsiHKCI CYCGRG 1 cut(s) 685
BsiSI CCGG 4 cut(s) 180, 323, 686, 1127
BslFI GGGAC 3 cut(s) 38, 959, 1164
BslI CCNNNNNNNGG 3 cut(s) 685, 686, 1147
BsmAI GTCTC 4 cut(s) 110, 193, 558, 824
BsmBI CGTCTC 3 cut(s) 110, 558, 824
BsmFI GGGAC 3 cut(s) 38, 959, 1164
BsmI GAATGC 1 cut(s) 1039
BsnI GGCC 4 cut(s) 183, 455, 1217, 1224
BsoBI CYCGRG 1 cut(s) 685
Bsp1286I GDGCHC 1 cut(s) 496
Bsp143I GATC 3 cut(s) 163, 277, 548
Bsp1720I GCTNAGC 2 cut(s) 805, 875
Bsp19I CCATGG 1 cut(s) 1218
BspACI CCGC 8 cut(s) 115, 134, 184, 496, 809, 852, 949, 951
BspANI GGCC 4 cut(s) 183, 455, 1217, 1224
BspCNI CTCAG 4 cut(s) 500, 818, 1189, 1253
BspFNI CGCG 2 cut(s) 117, 951
BspHI TCATGA 1 cut(s) 300
BspLI GGNNCC 4 cut(s) 270, 319, 493, 947
BspMAI CTGCAG 2 cut(s) 378, 673
BspMI ACCTGC 1 cut(s) 234
BspPI GGATC 1 cut(s) 556
BspT107I GGYRCC 3 cut(s) 268, 317, 491
BsrBI CCGCTC 2 cut(s) 136, 852
BsrI ACTGG 3 cut(s) 221, 358, 1055
BssECI CCNNGG 7 cut(s) 146, 286, 321, 684, 685, 949, 1218
BssMI GATC 3 cut(s) 163, 277, 548
BssNI GRCGYC 1 cut(s) 269
BssT1I CCWWGG 2 cut(s) 146, 1218
Bst2UI CCWGG 1 cut(s) 288
Bst4CI ACNGT 3 cut(s) 52, 1328, 1334
Bst6I CTCTTC 1 cut(s) 822
BstACI GRCGYC 1 cut(s) 269
BstAPI GCANNNNNTGC 2 cut(s) 158, 1001
BstBAI YACGTR 1 cut(s) 158
BstC8I GCNNGC 3 cut(s) 433, 496, 993
BstDEI CTNAG 6 cut(s) 487, 805, 875, 880, 1197, 1240
BstDSI CCRYGG 2 cut(s) 949, 1218
BstEII GGTNACC 1 cut(s) 779
BstF5I GGATG 3 cut(s) 80, 176, 1075
BstFNI CGCG 2 cut(s) 117, 951
BstH2I RGCGCY 1 cut(s) 272
BstHHI GCGC 1 cut(s) 271
BstKTI GATC 3 cut(s) 166, 280, 551
BstMAI GTCTC 4 cut(s) 110, 193, 558, 824
BstMBI GATC 3 cut(s) 163, 277, 548
BstMCI CGRYCG 1 cut(s) 184
BstMWI GCNNNNNNNGC 7 cut(s) 158, 382, 391, 441, 491, 841, 1001
BstNI CCWGG 1 cut(s) 288
BstPI GGTNACC 1 cut(s) 779
BstSCI CCNGG 4 cut(s) 286, 321, 684, 685
BstSFI CTRYAG 2 cut(s) 374, 669
BstSLI GKGCMC 1 cut(s) 496
BstUI CGCG 2 cut(s) 117, 951
BstV1I GCAGC 3 cut(s) 360, 369, 485
BstV2I GAAGAC 1 cut(s) 60
BstZI CGGCCG 1 cut(s) 181
Bsu36I CCTNAGG 1 cut(s) 487
BsuI GTATCC 2 cut(s) 668, 1324
BsuRI GGCC 4 cut(s) 183, 455, 1217, 1224
BtgI CCRYGG 2 cut(s) 949, 1218
BtsCI GGATG 3 cut(s) 80, 176, 1075
BtsI GCAGTG 3 cut(s) 383, 401, 905
BtsIMutI CAGTG 6 cut(s) 351, 383, 401, 905, 933, 1062
BveI ACCTGC 1 cut(s) 234
Cac8I GCNNGC 3 cut(s) 433, 496, 993
CciI TCATGA 1 cut(s) 300
CfoI GCGC 1 cut(s) 271
Cfr13I GGNCC 2 cut(s) 946, 1222
Cfr42I CCGCGG 1 cut(s) 952
Cfr9I CCCGGG 1 cut(s) 685
CseI GACGC 2 cut(s) 92, 841
Csp6I GTAC 3 cut(s) 868, 1264, 1324
CspCI CAANNNNNGTGG 2 cut(s) 350, 385
CviAII CATG 6 cut(s) 64, 301, 457, 937, 964, 1219
CviQI GTAC 3 cut(s) 868, 1264, 1324
DdeI CTNAG 6 cut(s) 487, 805, 875, 880, 1197, 1240
DinI GGCGCC 1 cut(s) 270
DpnI GATC 3 cut(s) 165, 279, 550
DpnII GATC 3 cut(s) 163, 277, 548
DraI TTTAAA 1 cut(s) 310
EaeI YGGCCR 2 cut(s) 181, 1215
EagI CGGCCG 1 cut(s) 181
Eam1104I CTCTTC 1 cut(s) 822
EarI CTCTTC 1 cut(s) 822
EclXI CGGCCG 1 cut(s) 181
Eco130I CCWWGG 2 cut(s) 146, 1218
Eco47I GGWCC 1 cut(s) 946
Eco52I CGGCCG 1 cut(s) 181
Eco72I CACGTG 1 cut(s) 158
Eco81I CCTNAGG 1 cut(s) 487
Eco88I CYCGRG 1 cut(s) 685
Eco91I GGTNACC 1 cut(s) 779
EcoO65I GGTNACC 1 cut(s) 779
EcoRI GAATTC 1 cut(s) 1192
EcoRII CCWGG 1 cut(s) 286
EcoT14I CCWWGG 2 cut(s) 146, 1218
EgeI GGCGCC 1 cut(s) 270
EheI GGCGCC 1 cut(s) 270
ErhI CCWWGG 2 cut(s) 146, 1218
Esp3I CGTCTC 3 cut(s) 110, 558, 824
FaeI CATG 6 cut(s) 67, 304, 460, 940, 967, 1222
FaqI GGGAC 3 cut(s) 38, 959, 1164
FatI CATG 6 cut(s) 63, 300, 456, 936, 963, 1218
FauI CCCGC 1 cut(s) 503
FbaI TGATCA 1 cut(s) 277
FblI GTMKAC 1 cut(s) 706
Fnu4HI GCNGC 5 cut(s) 184, 358, 374, 499, 810
FokI GGATG 3 cut(s) 67, 163, 1082
Fsp4HI GCNGC 5 cut(s) 184, 358, 374, 499, 810
FspBI CTAG 2 cut(s) 147, 1154
GlaI GCGC 1 cut(s) 270
GluI GCNGC 5 cut(s) 184, 358, 374, 499, 810
HaeII RGCGCY 1 cut(s) 272
HaeIII GGCC 4 cut(s) 183, 455, 1217, 1224
HapII CCGG 4 cut(s) 180, 323, 686, 1127
HgaI GACGC 2 cut(s) 92, 841
HhaI GCGC 1 cut(s) 271
Hin1I GRCGYC 1 cut(s) 269
Hin1II CATG 6 cut(s) 67, 304, 460, 940, 967, 1222
Hin6I GCGC 1 cut(s) 269
HinP1I GCGC 1 cut(s) 269
HincII GTYRAC 1 cut(s) 661
HindII GTYRAC 1 cut(s) 661
HindIII AAGCTT 1 cut(s) 877
HinfI GANTC 4 cut(s) 119, 342, 733, 968
HpaII CCGG 4 cut(s) 180, 323, 686, 1127
HphI GGTGA 4 cut(s) 40, 104, 547, 1340
Hpy166II GTNNAC 3 cut(s) 623, 661, 707
Hpy188I TCNGA 5 cut(s) 341, 1045, 1112, 1198, 1243
Hpy188III TCNNGA 1 cut(s) 301
Hpy8I GTNNAC 3 cut(s) 623, 661, 707
Hpy99I CGWCG 1 cut(s) 1175
HpyAV CCTTC 8 cut(s) 66, 346, 445, 554, 723, 774, 878, 1226
HpyCH4III ACNGT 3 cut(s) 52, 1328, 1334
HpyCH4IV ACGT 5 cut(s) 157, 236, 261, 567, 1278
HpyCH4V TGCA 8 cut(s) 32, 128, 376, 431, 477, 671, 759, 995
HpyF10VI GCNNNNNNNGC 7 cut(s) 158, 382, 391, 441, 491, 841, 1001
HpyF3I CTNAG 6 cut(s) 487, 805, 875, 880, 1197, 1240
HpySE526I ACGT 5 cut(s) 157, 236, 261, 567, 1278
Hsp92I GRCGYC 1 cut(s) 269
Hsp92II CATG 6 cut(s) 67, 304, 460, 940, 967, 1222
HspAI GCGC 1 cut(s) 269
KasI GGCGCC 1 cut(s) 268
Ksp22I TGATCA 1 cut(s) 277
KspI CCGCGG 1 cut(s) 952
Kzo9I GATC 3 cut(s) 163, 277, 548
LmnI GCTCC 1 cut(s) 240
Lsp1109I GCAGC 3 cut(s) 360, 369, 485
LweI GCATC 4 cut(s) 14, 89, 137, 991
MaeI CTAG 2 cut(s) 147, 1154
MaeII ACGT 5 cut(s) 157, 236, 261, 567, 1278
MaeIII GTNAC 6 cut(s) 257, 647, 779, 1057, 1088, 1328
MalI GATC 3 cut(s) 165, 279, 550
MbiI CCGCTC 2 cut(s) 136, 852
MboI GATC 3 cut(s) 163, 277, 548
MboII GAAGA 5 cut(s) 60, 605, 708, 836, 839
MhlI GDGCHC 1 cut(s) 496
MlsI TGGCCA 1 cut(s) 1217
MluCI AATT 4 cut(s) 36, 690, 1131, 1192
MluNI TGGCCA 1 cut(s) 1217
Mly113I GGCGCC 1 cut(s) 269
MlyI GAGTC 2 cut(s) 113, 351
MmeI TCCRAC 2 cut(s) 1023, 1267
MnlI CCTC 8 cut(s) 35, 70, 91, 297, 496, 947, 1192, 1328
Mox20I TGGCCA 1 cut(s) 1217
MroXI GAANNNNTTC 1 cut(s) 209
MscI TGGCCA 1 cut(s) 1217
MseI TTAA 5 cut(s) 87, 309, 534, 605, 701
MslI CAYNNNNRTG 1 cut(s) 654
Msp20I TGGCCA 1 cut(s) 1217
MspA1I CMGCKG 3 cut(s) 498, 809, 951
MspI CCGG 4 cut(s) 180, 323, 686, 1127
MspR9I CCNGG 4 cut(s) 288, 323, 686, 687
Mva1269I GAATGC 1 cut(s) 1039
MvaI CCWGG 1 cut(s) 288
MvnI CGCG 2 cut(s) 117, 951
MwoI GCNNNNNNNGC 7 cut(s) 158, 382, 391, 441, 491, 841, 1001
NarI GGCGCC 1 cut(s) 269
NciI CCSGG 3 cut(s) 323, 686, 687
NcoI CCATGG 1 cut(s) 1218
NdeII GATC 3 cut(s) 163, 277, 548
NlaIII CATG 6 cut(s) 67, 304, 460, 940, 967, 1222
NlaIV GGNNCC 4 cut(s) 270, 319, 493, 947
NmuCI GTSAC 3 cut(s) 647, 1057, 1328
PagI TCATGA 1 cut(s) 300
PctI GAATGC 1 cut(s) 1039
PdmI GAANNNNTTC 1 cut(s) 209
PfeI GAWTC 2 cut(s) 733, 968
PkrI GCNGC 5 cut(s) 185, 359, 375, 500, 811
PleI GAGTC 2 cut(s) 113, 350
PluTI GGCGCC 1 cut(s) 272
PmaCI CACGTG 1 cut(s) 158
PmlI CACGTG 1 cut(s) 158
PpsI GAGTC 2 cut(s) 113, 350
Ppu21I YACGTR 1 cut(s) 158
Psp6I CCWGG 1 cut(s) 286
PspCI CACGTG 1 cut(s) 158
PspEI GGTNACC 1 cut(s) 779
PspGI CCWGG 1 cut(s) 286
PspN4I GGNNCC 4 cut(s) 270, 319, 493, 947
PspPI GGNCC 2 cut(s) 946, 1222
PstI CTGCAG 2 cut(s) 378, 673
RsaI GTAC 3 cut(s) 869, 1265, 1325
RsaNI GTAC 3 cut(s) 868, 1264, 1324
RseI CAYNNNNRTG 1 cut(s) 654
SacII CCGCGG 1 cut(s) 952
SaqAI TTAA 5 cut(s) 87, 309, 534, 605, 701
SatI GCNGC 5 cut(s) 184, 358, 374, 499, 810
Sau3AI GATC 3 cut(s) 163, 277, 548
Sau96I GGNCC 2 cut(s) 946, 1222
SchI GAGTC 2 cut(s) 113, 351
ScrFI CCNGG 4 cut(s) 288, 323, 686, 687
SduI GDGCHC 1 cut(s) 496
SfaNI GCATC 4 cut(s) 14, 89, 137, 991
SfcI CTRYAG 2 cut(s) 374, 669
SfoI GGCGCC 1 cut(s) 270
Sfr303I CCGCGG 1 cut(s) 952
SgrBI CCGCGG 1 cut(s) 952
SinI GGWCC 1 cut(s) 946
SmaI CCCGGG 1 cut(s) 687
SmiMI CAYNNNNRTG 1 cut(s) 654
SmlI CTYRAG 1 cut(s) 1319
SmoI CTYRAG 1 cut(s) 1319
Sse9I AATT 4 cut(s) 36, 690, 1131, 1192
SsiI CCGC 8 cut(s) 115, 134, 184, 496, 809, 852, 949, 951
SspDI GGCGCC 1 cut(s) 268
SspI AATATT 3 cut(s) 18, 916, 1309
SspMI CTAG 2 cut(s) 147, 1154
StyD4I CCNGG 4 cut(s) 286, 321, 684, 685
StyI CCWWGG 2 cut(s) 146, 1218
TaaI ACNGT 3 cut(s) 52, 1328, 1334
TaiI ACGT 5 cut(s) 160, 239, 264, 570, 1281
TaqI TCGA 1 cut(s) 251
TasI AATT 4 cut(s) 36, 690, 1131, 1192
TauI GCSGC 2 cut(s) 186, 812
TfiI GAWTC 2 cut(s) 733, 968
Tru1I TTAA 5 cut(s) 87, 309, 534, 605, 701
Tru9I TTAA 5 cut(s) 87, 309, 534, 605, 701
TscAI CASTG 6 cut(s) 358, 383, 401, 912, 933, 1062
TseFI GTSAC 3 cut(s) 647, 1057, 1328
TseI GCWGC 3 cut(s) 357, 373, 498
Tsp45I GTSAC 3 cut(s) 647, 1057, 1328
TspDTI ATGAA 5 cut(s) 741, 952, 1046, 1205, 1245
TspGWI ACGGA 3 cut(s) 73, 561, 1152
TspMI CCCGGG 1 cut(s) 685
TspRI CASTG 6 cut(s) 358, 383, 401, 912, 933, 1062
VpaK11BI GGWCC 1 cut(s) 946
XapI RAATTY 1 cut(s) 1192
XmaI CCCGGG 1 cut(s) 685
XmaJI CCTAGG 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 706
XmnI GAANNNNTTC 1 cut(s) 209
XspI CTAG 2 cut(s) 147, 1154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.