Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0008030

Physical Location & Seq

Genomic Coordinates Forward (+)

24445225 .. 24448292

Gene Structure 3068 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1135000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGAAACTAAGGGCCCAAAAAACGGTTCAAAGAAACCCGGCCCAACGTCCCACCAAGAGTACGTCATCAGATGGAGTGTCTGAACCGAACTCGGGGCTCATAAAAATCAGGGTTTCGAAAGTCTTTCCTTTCAGAAAATTCAGATCCAAAGAAGTACACCTTCTTCGAACTTCTCTCGTCGTCCGTACGATTCACTGTGTTCAGAAACTCACAGTATTGGATATGAGGAGGTACAGCCCACAGTACTATAGTCCTCCGAGGAGGAGCTACGGCGGCGGCGGAGGAGGAGGTGGGCGAGGAAGAAGTCCCCCAAGAAGGCGCAAGGAACAGAATAATGGAAGTCTTTTGGTCCGGAACATTCCTCTGGATTGCAGAGCTGAAGAGCTGAGGGCTTCCTTTGAAAGATACGGGGAAGTTCGGGATGTCTACATTCCCAAGGACTACTATACTGGGGAACCTCGGGGATTTGCATTTATTCAGTTTGTGGATTCTTATGAGGCCGCAGAGGCTCAGTATCATATGAATGGGAAGATTTTTGCTGGGAGGGAGATATCTGTGGTGGTTGCTGCAGAGACAAGGAAAAGGCCAGAGGAGATGCGCCAGAGGACTAGGGTTAGAGAGCCATCAGGCCATGGGGGAAGACGATCATCTTATTATGGGCGTTCACGTTCTCGTTCTCGCTCTCCACGTTATCCATCAGGTTCTAGAAGTCGATACCGCTCAAGGTCCTATTCTCCTGCTCCAAGACGGCGAGGTGACTCTATTTCACCAAGCAGAAGGCGCCGAGACAACCCAAGATCACCCCGAGATCTTCCACCATTGCGAGACGGTGATCATGATCGCAGACCATATTCTCCAGGTTATGACAATGGGGCTGGACCAATTGAAAACGCCGATGGGTATGACAAGAAACCTATGCGCGAAGATAAGGACGGAAGAGATCACTGGAGGTCTCCTGATAGAGCATCAAGATCACCATCTGGATCAAGGTCCAGATCTGCTGAGTTATCACCTCCGCGCAGCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000244 GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000387 GO:0000395 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0008380 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0019904 GO:0022607 GO:0022613 GO:0022618 GO:0031323 GO:0031324 GO:0031974 GO:0031981 GO:0033119 GO:0034622 GO:0034641 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045292 GO:0045934 GO:0046483 GO:0048024 GO:0048025 GO:0048519 GO:0048523 GO:0050684 GO:0050686 GO:0050733 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1903311 GO:1903312

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

343

Amino Acids

39.22

Weight (kDa)

11.07

Isoelectric Point (pI)

88.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	115 - 184	7.9e-19	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55460
fragaria_vesca	FvH4_7g22601 FvH4_7g22602
malus_domestica	MD01G1135000.v1.1 MD07G1199700.v1.1
prunus_persica	Prupe.2G236400_v2.0.a1 Prupe.2G236400_v2.0.a1 Prupe.2G236400_v2.0.a1 Prupe.2G236400_v2.0.a1
pyrus_communis	pycom01g15570 pycom07g18650
rosa_chinensis	RchiOBHm_Chr1g0367721
rosa_laevigata	RLG00000027268
rosa_multiflora	Rmu_co8328167.1_g000001 Rmu_sc0008470.1_g000003 Rmu_sc0033554.1_g000001
rosa_roxburghii	Rroxscaffold_4G00289280
rosa_rugosa	Rorug01G0336200
rosa_samantha	Rh1AG343300 Rh1BG305000 Rh1CG320700 Rh1DG337300 Rh6BG013900
rosa_wichuraiana	Rw1G030550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	780
AccBSI	CCGCTC	1 cut(s)	720
AccI	GTMKAC	1 cut(s)	426
AccII	CGCG	2 cut(s)	921, 1018
AccIII	TCCGGA	1 cut(s)	351
AciI	CCGC	6 cut(s)	273, 276, 279, 501, 718, 1016
AclWI	GGATC	2 cut(s)	138, 991
AcsI	RAATTY	1 cut(s)	137
AcuI	CTGAAG	1 cut(s)	399
AcyI	GRCGYC	1 cut(s)	781
AfaI	GTAC	5 cut(s)	61, 156, 187, 233, 245
AfiI	CCNNNNNNNGG	3 cut(s)	22, 92, 315
AgsI	TTSAA	3 cut(s)	29, 401, 887
AjnI	CCWGG	1 cut(s)	856
AjuI	GAANNNNNNNTTGG	2 cut(s)	9, 41
AluBI	AGCT	3 cut(s)	267, 377, 385
AluI	AGCT	3 cut(s)	267, 377, 385
Alw26I	GTCTC	4 cut(s)	566, 780, 819, 957
AlwI	GGATC	2 cut(s)	138, 991
Ama87I	CYCGRG	3 cut(s)	91, 459, 804
Aor13HI	TCCGGA	1 cut(s)	351
AoxI	GGCC	5 cut(s)	12, 39, 498, 584, 628
ApaI	GGGCCC	1 cut(s)	16
ApeKI	GCWGC	2 cut(s)	566, 1020
ApoI	RAATTY	1 cut(s)	137
AspLEI	GCGC	5 cut(s)	321, 600, 783, 921, 1020
AspS9I	GGNCC	7 cut(s)	12, 13, 40, 349, 726, 878, 990
AsuC2I	CCSGG	1 cut(s)	38
AsuHPI	GGTGA	6 cut(s)	759, 767, 792, 842, 966, 1002
AsuII	TTCGAA	2 cut(s)	116, 166
AvaI	CYCGRG	3 cut(s)	91, 459, 804
AvaII	GGWCC	4 cut(s)	349, 726, 878, 990
BaeGI	GKGCMC	1 cut(s)	16
BanI	GGYRCC	1 cut(s)	780
BanII	GRGCYC	2 cut(s)	16, 99
BarI	GAAGNNNNNNTAC	2 cut(s)	147, 179
BbsI	GAAGAC	1 cut(s)	646
BbvCI	CCTCAGC	1 cut(s)	386
BbvI	GCAGC	1 cut(s)	553
BccI	CCATC	5 cut(s)	65, 631, 703, 890, 985
BceAI	ACGGC	2 cut(s)	286, 764
BciT130I	CCWGG	1 cut(s)	858
BclI	TGATCA	1 cut(s)	832
BcnI	CCSGG	1 cut(s)	38
BcoDI	GTCTC	4 cut(s)	566, 780, 819, 957
BfaI	CTAG	2 cut(s)	609, 705
BfmI	CTRYAG	2 cut(s)	247, 567
BfoI	RGCGCY	1 cut(s)	784
BglI	GCCNNNNNGGC	1 cut(s)	506
BglII	AGATCT	2 cut(s)	808, 995
BisI	GCNGC	5 cut(s)	274, 277, 501, 567, 1021
BlsI	GCNGC	5 cut(s)	275, 278, 502, 568, 1022
BmcAI	AGTACT	1 cut(s)	245
Bme1390I	CCNGG	2 cut(s)	38, 858
Bme18I	GGWCC	4 cut(s)	349, 726, 878, 990
BmeT110I	CYCGRG	3 cut(s)	91, 459, 804
BmgT120I	GGNCC	7 cut(s)	12, 13, 40, 349, 726, 878, 990
BmiI	GGNNCC	3 cut(s)	14, 456, 782
BmrFI	CCNGG	2 cut(s)	38, 858
BmrI	ACTGGG	1 cut(s)	459
BmsI	GCATC	2 cut(s)	585, 974
BmuI	ACTGGG	1 cut(s)	459
BpiI	GAAGAC	1 cut(s)	646
BpmI	CTGGAG	2 cut(s)	840, 967
Bpu10I	CCTNAGC	1 cut(s)	386
Bpu14I	TTCGAA	2 cut(s)	116, 166
BpuEI	CTTGAG	1 cut(s)	706
BpuMI	CCSGG	1 cut(s)	38
BsaBI	GATNNNNATC	2 cut(s)	837, 976
BsaHI	GRCGYC	1 cut(s)	781
BsaI	GGTCTC	1 cut(s)	957
BsaJI	CCNNGG	4 cut(s)	257, 435, 458, 631
BsaWI	WCCGGW	1 cut(s)	351
Bsc4I	CCNNNNNNNGG	3 cut(s)	22, 92, 315
Bse1I	ACTGG	2 cut(s)	454, 950
Bse3DI	GCAATG	1 cut(s)	818
Bse8I	GATNNNNATC	2 cut(s)	837, 976
BseAI	TCCGGA	1 cut(s)	351
BseBI	CCWGG	1 cut(s)	858
BseDI	CCNNGG	4 cut(s)	257, 435, 458, 631
BseGI	GGATG	1 cut(s)	427
BseJI	GATNNNNATC	2 cut(s)	837, 976
BseLI	CCNNNNNNNGG	3 cut(s)	22, 92, 315
BseMI	GCAATG	1 cut(s)	818
BseMII	CTCAG	3 cut(s)	377, 524, 993
BseNI	ACTGG	2 cut(s)	454, 950
BseRI	GAGGAG	6 cut(s)	241, 274, 277, 297, 300, 605
BseSI	GKGCMC	1 cut(s)	16
BseXI	GCAGC	1 cut(s)	553
BseYI	CCCAGC	1 cut(s)	539
Bsh1236I	CGCG	2 cut(s)	921, 1018
BshFI	GGCC	5 cut(s)	14, 41, 500, 586, 630
BshNI	GGYRCC	1 cut(s)	780
BsiHKCI	CYCGRG	3 cut(s)	91, 459, 804
BsiSI	CCGG	2 cut(s)	38, 352
BsiWI	CGTACG	1 cut(s)	185
BslFI	GGGAC	2 cut(s)	33, 291
BslI	CCNNNNNNNGG	3 cut(s)	22, 92, 315
BsmAI	GTCTC	4 cut(s)	566, 780, 819, 957
BsmBI	CGTCTC	1 cut(s)	819
BsmFI	GGGAC	2 cut(s)	33, 291
BsnI	GGCC	5 cut(s)	14, 41, 500, 586, 630
Bso31I	GGTCTC	1 cut(s)	957
BsoBI	CYCGRG	3 cut(s)	91, 459, 804
Bsp119I	TTCGAA	2 cut(s)	116, 166
Bsp120I	GGGCCC	1 cut(s)	12
Bsp1286I	GDGCHC	2 cut(s)	16, 99
Bsp13I	TCCGGA	1 cut(s)	351
Bsp19I	CCATGG	1 cut(s)	631
BspACI	CCGC	6 cut(s)	273, 276, 279, 501, 718, 1016
BspANI	GGCC	5 cut(s)	14, 41, 500, 586, 630
BspCNI	CTCAG	3 cut(s)	378, 523, 994
BspEI	TCCGGA	1 cut(s)	351
BspFNI	CGCG	2 cut(s)	921, 1018
BspHI	TCATGA	1 cut(s)	835
BspLI	GGNNCC	3 cut(s)	14, 456, 782
BspMAI	CTGCAG	1 cut(s)	571
BspPI	GGATC	2 cut(s)	138, 991
BspQI	GCTCTTC	1 cut(s)	375
BspT104I	TTCGAA	2 cut(s)	116, 166
BspT107I	GGYRCC	1 cut(s)	780
BspTNI	GGTCTC	1 cut(s)	957
BsrBI	CCGCTC	1 cut(s)	720
BsrDI	GCAATG	1 cut(s)	818
BsrI	ACTGG	2 cut(s)	454, 950
BssECI	CCNNGG	4 cut(s)	257, 435, 458, 631
BssNI	GRCGYC	1 cut(s)	781
BssT1I	CCWWGG	2 cut(s)	435, 631
Bst2UI	CCWGG	1 cut(s)	858
Bst4CI	ACNGT	5 cut(s)	25, 197, 214, 243, 830
Bst6I	CTCTTC	2 cut(s)	375, 931
BstACI	GRCGYC	1 cut(s)	781
BstBI	TTCGAA	2 cut(s)	116, 166
BstDEI	CTNAG	4 cut(s)	8, 386, 510, 1002
BstDSI	CCRYGG	1 cut(s)	631
BstF5I	GGATG	1 cut(s)	427
BstFNI	CGCG	2 cut(s)	921, 1018
BstH2I	RGCGCY	1 cut(s)	784
BstHHI	GCGC	5 cut(s)	321, 600, 783, 921, 1020
BstMAI	GTCTC	4 cut(s)	566, 780, 819, 957
BstMWI	GCNNNNNNNGC	3 cut(s)	273, 506, 780
BstNI	CCWGG	1 cut(s)	858
BstSCI	CCNGG	2 cut(s)	36, 856
BstSFI	CTRYAG	2 cut(s)	247, 567
BstSLI	GKGCMC	1 cut(s)	16
BstUI	CGCG	2 cut(s)	921, 1018
BstV1I	GCAGC	1 cut(s)	553
BstV2I	GAAGAC	1 cut(s)	646
BstX2I	RGATCY	3 cut(s)	143, 808, 995
BstYI	RGATCY	3 cut(s)	143, 808, 995
BsuRI	GGCC	5 cut(s)	14, 41, 500, 586, 630
BtgI	CCRYGG	1 cut(s)	631
BtsCI	GGATG	1 cut(s)	427
BtsIMutI	CAGTG	2 cut(s)	193, 943
CciI	TCATGA	1 cut(s)	835
CfoI	GCGC	5 cut(s)	321, 600, 783, 921, 1020
Cfr13I	GGNCC	7 cut(s)	12, 13, 40, 349, 726, 878, 990
Csp6I	GTAC	5 cut(s)	60, 155, 186, 232, 244
CviAII	CATG	2 cut(s)	632, 836
CviQI	GTAC	5 cut(s)	60, 155, 186, 232, 244
DdeI	CTNAG	4 cut(s)	8, 386, 510, 1002
DinI	GGCGCC	1 cut(s)	782
Eam1104I	CTCTTC	2 cut(s)	375, 931
EarI	CTCTTC	2 cut(s)	375, 931
EciI	GGCGGA	1 cut(s)	294
Eco130I	CCWWGG	2 cut(s)	435, 631
Eco24I	GRGCYC	2 cut(s)	16, 99
Eco31I	GGTCTC	1 cut(s)	957
Eco32I	GATATC	1 cut(s)	552
Eco47I	GGWCC	4 cut(s)	349, 726, 878, 990
Eco57I	CTGAAG	1 cut(s)	399
Eco88I	CYCGRG	3 cut(s)	91, 459, 804
EcoO109I	RGGNCCY	2 cut(s)	12, 726
EcoRII	CCWGG	1 cut(s)	856
EcoRV	GATATC	1 cut(s)	552
EcoT14I	CCWWGG	2 cut(s)	435, 631
EcoT38I	GRGCYC	2 cut(s)	16, 99
EgeI	GGCGCC	1 cut(s)	782
EheI	GGCGCC	1 cut(s)	782
ErhI	CCWWGG	2 cut(s)	435, 631
Esp3I	CGTCTC	1 cut(s)	819
FaeI	CATG	2 cut(s)	635, 839
FalI	AAGNNNNNCTT	2 cut(s)	144, 176
FaqI	GGGAC	2 cut(s)	33, 291
FatI	CATG	2 cut(s)	631, 835
FauNDI	CATATG	1 cut(s)	519
FbaI	TGATCA	1 cut(s)	832
FblI	GTMKAC	1 cut(s)	426
Fnu4HI	GCNGC	5 cut(s)	274, 277, 501, 567, 1021
FokI	GGATG	1 cut(s)	434
FriOI	GRGCYC	2 cut(s)	16, 99
Fsp4HI	GCNGC	5 cut(s)	274, 277, 501, 567, 1021
FspBI	CTAG	2 cut(s)	609, 705
GlaI	GCGC	5 cut(s)	320, 599, 782, 920, 1019
GluI	GCNGC	5 cut(s)	274, 277, 501, 567, 1021
GsaI	CCCAGC	1 cut(s)	543
GsuI	CTGGAG	2 cut(s)	840, 967
HaeII	RGCGCY	1 cut(s)	784
HaeIII	GGCC	5 cut(s)	14, 41, 500, 586, 630
HapII	CCGG	2 cut(s)	38, 352
HhaI	GCGC	5 cut(s)	321, 600, 783, 921, 1020
Hin1I	GRCGYC	1 cut(s)	781
Hin1II	CATG	2 cut(s)	635, 839
Hin6I	GCGC	5 cut(s)	319, 598, 781, 919, 1018
HinP1I	GCGC	5 cut(s)	319, 598, 781, 919, 1018
HinfI	GANTC	3 cut(s)	190, 488, 758
HpaII	CCGG	2 cut(s)	38, 352
HphI	GGTGA	6 cut(s)	759, 767, 792, 842, 966, 1002
Hpy166II	GTNNAC	3 cut(s)	157, 427, 665
Hpy188I	TCNGA	6 cut(s)	70, 82, 134, 143, 204, 258
Hpy188III	TCNNGA	9 cut(s)	352, 365, 419, 705, 836, 956, 969, 981, 993
Hpy8I	GTNNAC	3 cut(s)	157, 427, 665
Hpy99I	CGWCG	1 cut(s)	182
HpyAV	CCTTC	3 cut(s)	170, 309, 771
HpyCH4III	ACNGT	5 cut(s)	25, 197, 214, 243, 830
HpyCH4IV	ACGT	4 cut(s)	46, 62, 667, 688
HpyCH4V	TGCA	3 cut(s)	372, 470, 569
HpyF10VI	GCNNNNNNNGC	3 cut(s)	273, 506, 780
HpyF3I	CTNAG	4 cut(s)	8, 386, 510, 1002
HpySE526I	ACGT	4 cut(s)	46, 62, 667, 688
Hsp92I	GRCGYC	1 cut(s)	781
Hsp92II	CATG	2 cut(s)	635, 839
HspAI	GCGC	5 cut(s)	319, 598, 781, 919, 1018
KasI	GGCGCC	1 cut(s)	780
Kpn2I	TCCGGA	1 cut(s)	351
Ksp22I	TGATCA	1 cut(s)	832
LguI	GCTCTTC	1 cut(s)	375
LmnI	GCTCC	2 cut(s)	264, 745
Lsp1109I	GCAGC	1 cut(s)	553
LweI	GCATC	2 cut(s)	585, 974
MaeI	CTAG	2 cut(s)	609, 705
MaeII	ACGT	4 cut(s)	46, 62, 667, 688
MaeIII	GTNAC	1 cut(s)	755
MbiI	CCGCTC	1 cut(s)	720
MboII	GAAGA	8 cut(s)	155, 312, 392, 541, 651, 803, 935, 948
MfeI	CAATTG	1 cut(s)	882
MflI	RGATCY	3 cut(s)	143, 808, 995
MhlI	GDGCHC	2 cut(s)	16, 99
MluCI	AATT	2 cut(s)	137, 882
Mly113I	GGCGCC	1 cut(s)	781
MlyI	GAGTC	1 cut(s)	752
MroI	TCCGGA	1 cut(s)	351
MslI	CAYNNNNRTG	1 cut(s)	522
MspI	CCGG	2 cut(s)	38, 352
MspR9I	CCNGG	2 cut(s)	38, 858
MunI	CAATTG	1 cut(s)	882
MvaI	CCWGG	1 cut(s)	858
MvnI	CGCG	2 cut(s)	921, 1018
MwoI	GCNNNNNNNGC	3 cut(s)	273, 506, 780
NarI	GGCGCC	1 cut(s)	781
NciI	CCSGG	1 cut(s)	38
NcoI	CCATGG	1 cut(s)	631
NdeI	CATATG	1 cut(s)	519
NlaIII	CATG	2 cut(s)	635, 839
NlaIV	GGNNCC	3 cut(s)	14, 456, 782
NmeAIII	GCCGAG	1 cut(s)	809
NmuCI	GTSAC	1 cut(s)	755
NspV	TTCGAA	2 cut(s)	116, 166
PagI	TCATGA	1 cut(s)	835
PciSI	GCTCTTC	1 cut(s)	375
PcsI	WCGNNNNNNNCGW	1 cut(s)	685
PfeI	GAWTC	2 cut(s)	190, 488
Pfl23II	CGTACG	1 cut(s)	185
PkrI	GCNGC	5 cut(s)	275, 278, 502, 568, 1022
PleI	GAGTC	1 cut(s)	752
PluTI	GGCGCC	1 cut(s)	784
PpsI	GAGTC	1 cut(s)	752
PpuMI	RGGWCCY	1 cut(s)	726
Psp5II	RGGWCCY	1 cut(s)	726
Psp6I	CCWGG	1 cut(s)	856
PspFI	CCCAGC	1 cut(s)	539
PspGI	CCWGG	1 cut(s)	856
PspLI	CGTACG	1 cut(s)	185
PspN4I	GGNNCC	3 cut(s)	14, 456, 782
PspOMI	GGGCCC	1 cut(s)	12
PspPI	GGNCC	7 cut(s)	12, 13, 40, 349, 726, 878, 990
PspPPI	RGGWCCY	1 cut(s)	726
PstI	CTGCAG	1 cut(s)	571
PsuI	RGATCY	3 cut(s)	143, 808, 995
RsaI	GTAC	5 cut(s)	61, 156, 187, 233, 245
RsaNI	GTAC	5 cut(s)	60, 155, 186, 232, 244
RseI	CAYNNNNRTG	1 cut(s)	522
SapI	GCTCTTC	1 cut(s)	375
SatI	GCNGC	5 cut(s)	274, 277, 501, 567, 1021
Sau96I	GGNCC	7 cut(s)	12, 13, 40, 349, 726, 878, 990
ScaI	AGTACT	1 cut(s)	245
SchI	GAGTC	1 cut(s)	752
ScrFI	CCNGG	2 cut(s)	38, 858
SduI	GDGCHC	2 cut(s)	16, 99
SfaNI	GCATC	2 cut(s)	585, 974
SfcI	CTRYAG	2 cut(s)	247, 567
SfoI	GGCGCC	1 cut(s)	782
SfuI	TTCGAA	2 cut(s)	116, 166
SinI	GGWCC	4 cut(s)	349, 726, 878, 990
SmiMI	CAYNNNNRTG	1 cut(s)	522
SmlI	CTYRAG	1 cut(s)	721
SmoI	CTYRAG	1 cut(s)	721
Sse9I	AATT	2 cut(s)	137, 882
SsiI	CCGC	6 cut(s)	273, 276, 279, 501, 718, 1016
SspDI	GGCGCC	1 cut(s)	780
SspMI	CTAG	2 cut(s)	609, 705
StyD4I	CCNGG	2 cut(s)	36, 856
StyI	CCWWGG	2 cut(s)	435, 631
TaaI	ACNGT	5 cut(s)	25, 197, 214, 243, 830
TaiI	ACGT	4 cut(s)	49, 65, 670, 691
TaqI	TCGA	3 cut(s)	116, 166, 712
TasI	AATT	2 cut(s)	137, 882
TatI	WGTACW	2 cut(s)	154, 243
TauI	GCSGC	3 cut(s)	276, 279, 503
TfiI	GAWTC	2 cut(s)	190, 488
TscAI	CASTG	2 cut(s)	200, 950
TseFI	GTSAC	1 cut(s)	755
TseI	GCWGC	2 cut(s)	566, 1020
Tsp45I	GTSAC	1 cut(s)	755
TspDTI	ATGAA	2 cut(s)	17, 536
TspGWI	ACGGA	2 cut(s)	173, 948
TspRI	CASTG	2 cut(s)	200, 950
VpaK11BI	GGWCC	4 cut(s)	349, 726, 878, 990
XapI	RAATTY	1 cut(s)	137
XbaI	TCTAGA	1 cut(s)	704
XmiI	GTMKAC	1 cut(s)	426
XspI	CTAG	2 cut(s)	609, 705
ZrmI	AGTACT	1 cut(s)	245

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.