Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0005980

Physical Location & Seq

Genomic Coordinates Forward (+)

31807561 .. 31811443

Gene Structure 3883 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1228200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGGGCGAGGTGGGTATCAATAGGGAGGACGTGGAAGCGAAGCTGAGAGTAGAGGCGGAGAAGAAGGACGGCGGCGAGTGCGACTCTTCCGTCGGGACGATGCGGTGGGAGAAGCTGCTGCCGACGATGAACATGCGGGTGTTGCTGGTGGAAGCTGATGACTCCACCAGGCATATTATAGCTGCGCTTCTCAGGAAATGTAGCTACAGAGTTGCTGCTGTAGCTGATGGCTTAAACGCTTGGGAGATACTGAAGGCAAGGCCTCATAACATAGACCTGATACTGACAGAGGTCGATCTGCCATCGATATCTGGATTTGCTTTGCTTACGCTAATCATGGAGCACGAGATCTGCAAAAATATTCCTGTTATAATGATGTCCTCTCAGGATTCAATTAGCACCGTTTACAAATGCATGACGAGAGGCGTTTCTGACTATCTAGTCAAGCCTATTAGGAAGAATGAGCTGACAAATCTATGGCAGCATGTTTGGAGAAGACAATCTTTAGCCCGGAATGGCCCCCTCAATGAGAGTGTTGGACAACAAAAGATCAAAGCCACTTGTGAAAACGATGGTGCAAGCAATCATTCAAGTGGCTATATGGCACGTGTTAACGAAAACATGGGAAAAGGGACTGATTCTCAGAGCTCTTGTACAAAGCCAGACTTCGAAACTGAGAATGCCCCTGTAGATATGCAAATTCGGGGAAAAACGAAGAAAGATGAAGCACACGCCACTTTTGGAGAGAAATTTCTTACGCATGGAAATGCAGCTAGAGGAACAACTAAGACTGCCGATGAAATCACTGACACAGCAGTTTCACCAGGCAAGGGTGCCAAGGCAGAAAGTCAGAGGAGGGATGATAATATGACTAGTGAAGCTTGTGACAATAACGATCTACTTGTCAACTCTTGTAGAGATATTACTGACTTCATTGGAGCATTCAGTAAATATCCAAGTAGCAACCAGAGAAATTCTTTTTCAAGTAATGCACCTAGCATGTTTGATTCTGCTCCACAATTGGATCTGTCCTTGAGAAGACCCGACTCCAGTGGCTTTGAGAATCGAGTTACTGAGAAAAGGCACACCCTTGGCCACTCTGATGCTTCCGCCTTTTCAAGATACATCAACAAGCCAATGCAGCCCCAGAAAACTTCACTGTGTGATCAGCAAAAGGCATACGAAACTACGTGCGAGAAGCAAACATCTAATACCAATGCTGATTGTGATACTCCTGCTACAACTTTTAGTACTCCCAGGAGTATTATTACTCTAGCTACTGGTCAATCTAACCAATCCGAAGTTGGAATGGCATGCCCTGAGCAGAGACTATTTCCTCTTCCAGTTCCCGTGAAAGGCATAAGGGTTAACAATCTAAGCAATGGGTATGGTACGGTACTGCCTCCAATGTTTTGTGCACAATCAAGTCCATCACCAATTGCTAGTTCAGCTGCCCAGCAGGAACCCTCATTCCTGATGAATACATTTTACCCCGCAAATCTTCAAACAGATAAATCTGAGAAAGTATACGGCACACTTTATCAAAATGCCAAAGTTACAATGGACCAAGCTCAGAATCAGGATCAGAGATTCAATGAGGATCGAGGGCATATGTCCTCAGCAACCGATCAAAGTGCAAGTAGCAGTTTCTGTAATGGCAATACAGGTCATCTCAGTAGCATGGGGTATGGAAGTGCTTGTGGAAGCAACAATGTTGATCAGGTGGCTATGTTCAGGGCTGCTCCAGAGCACAAGAATGAAGACAGTTTCTTTAATCAAAACGGAAATTCTCATCGATCCATCCAAAGAGAAGCAGCTCTAAACAAGTTCCGCTTGAAGCGCAAAGATAGATGCTACGACAAGAAGGTTCGCTACGAGAGCAGAAAGAAACTCGCAGAGCAGCGTCCCAGAATAAAAGGGCAGTTTGTTCGTCAAGCAAGTAATGATCCTTCACCTGCAGAAACTGATGGCAATACATATGAGGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

663

Amino Acids

73.24

Weight (kDa)

7.5

Isoelectric Point (pI)

49.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	47 - 158	1.1e-21	Response regulator receiver domain
CCT	PF06203	603 - 645	5e-17	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24470
fragaria_vesca	FvH4_7g32920 FvH4_7g32920 FvH4_7g32920 FvH4_7g32920 FvH4_7g32920 FvH4_7g32920
malus_domestica	MD01G1228200.v1.1 MD07G1299100.v1.1
prunus_persica	Prupe.2G318900_v2.0.a1
pyrus_communis	pycom01g23650 pycom07g27150 pycom07g27160
rosa_chinensis	RchiOBHm_Chr1g0382871
rosa_laevigata	RLG00000026152
rosa_multiflora	Rmu_sc0002242.1_g000013 Rmu_sc0010366.1_g000006
rosa_roxburghii	Rroxscaffold_4G00277820
rosa_rugosa	Rorug01G0437000
rosa_samantha	Rh1AG462000 Rh1BG419000 Rh1CG432700 Rh1DG451100 Rh4BG143700 Rh4BG143800 Rh4DG139500
rosa_wichuraiana	Rw1G040980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	371
AarI	CACCTGC	1 cut(s)	1963
AasI	GACNNNNNNGTC	2 cut(s)	89, 440
Acc36I	ACCTGC	1 cut(s)	1963
AccB1I	GGYRCC	1 cut(s)	833
AccI	GTMKAC	1 cut(s)	1527
AciI	CCGC	7 cut(s)	56, 72, 103, 136, 1110, 1494, 1831
AclWI	GGATC	5 cut(s)	1032, 1590, 1608, 1791, 1940
AcoI	YGGCCR	1 cut(s)	1093
AcsI	RAATTY	4 cut(s)	699, 749, 973, 1786
AcuI	CTGAAG	1 cut(s)	272
AcvI	CACGTG	1 cut(s)	608
AdeI	CACNNNGTG	1 cut(s)	1163
AfaI	GTAC	4 cut(s)	655, 1252, 1393, 1398
AfiI	CCNNNNNNNGG	2 cut(s)	830, 1355
AflIII	ACRYGT	1 cut(s)	607
AgsI	TTSAA	7 cut(s)	393, 591, 984, 1119, 1505, 1594, 1837
AhlI	ACTAGT	1 cut(s)	872
AjiI	CACGTC	1 cut(s)	31
AjnI	CCWGG	3 cut(s)	167, 823, 1256
AjuI	GAANNNNNNNTTGG	2 cut(s)	1429, 1461
AloI	GAACNNNNNNTCC	2 cut(s)	1455, 1487
Alw21I	GWGCWC	4 cut(s)	345, 650, 1420, 1752
Alw26I	GTCTC	1 cut(s)	1321
Alw44I	GTGCAC	1 cut(s)	1416
AlwI	GGATC	5 cut(s)	1032, 1590, 1608, 1791, 1940
AlwNI	CAGNNNCTG	2 cut(s)	1650, 1964
AoxI	GGCC	3 cut(s)	260, 517, 1093
ApaLI	GTGCAC	1 cut(s)	1416
ApoI	RAATTY	4 cut(s)	699, 749, 973, 1786
AspLEI	GCGC	2 cut(s)	187, 1842
AspS9I	GGNCC	2 cut(s)	518, 1564
AsuC2I	CCSGG	1 cut(s)	511
AsuHPI	GGTGA	3 cut(s)	813, 1425, 1944
AsuII	TTCGAA	1 cut(s)	669
AvaII	GGWCC	1 cut(s)	1564
BaeGI	GKGCMC	1 cut(s)	1420
BalI	TGGCCA	1 cut(s)	1095
BanI	GGYRCC	1 cut(s)	833
BanII	GRGCYC	1 cut(s)	650
BarI	GAAGNNNNNNTAC	4 cut(s)	1856, 1888, 1933, 1965
BauI	CACGAG	1 cut(s)	344
BbrPI	CACGTG	1 cut(s)	608
BbsI	GAAGAC	3 cut(s)	502, 1045, 1767
Bbv12I	GWGCWC	4 cut(s)	345, 650, 1420, 1752
BbvCI	CCTCAGC	1 cut(s)	1618
BccI	CCATC	6 cut(s)	221, 310, 566, 1438, 1808, 1961
BceAI	ACGGC	2 cut(s)	85, 1546
BcgI	CGANNNNNNTGC	6 cut(s)	115, 149, 1616, 1650, 1910, 1944
BciT130I	CCWGG	3 cut(s)	169, 825, 1258
BclI	TGATCA	2 cut(s)	1165, 1717
BcnI	CCSGG	1 cut(s)	511
BcoDI	GTCTC	1 cut(s)	1321
BcuI	ACTAGT	1 cut(s)	872
BfaI	CTAG	6 cut(s)	440, 774, 873, 996, 1274, 1443
BfmI	CTRYAG	4 cut(s)	205, 219, 687, 1956
BfuAI	ACCTGC	1 cut(s)	1963
BglII	AGATCT	1 cut(s)	348
BmcAI	AGTACT	1 cut(s)	1252
Bme1390I	CCNGG	4 cut(s)	169, 511, 825, 1258
Bme18I	GGWCC	1 cut(s)	1564
BmgBI	CACGTC	1 cut(s)	31
BmgT120I	GGNCC	2 cut(s)	518, 1564
BmiI	GGNNCC	3 cut(s)	520, 835, 1464
BmrFI	CCNGG	4 cut(s)	169, 511, 825, 1258
BmsI	GCATC	3 cut(s)	90, 1093, 1841
BoxI	GACNNNNGTC	1 cut(s)	290
BpiI	GAAGAC	3 cut(s)	502, 1045, 1767
BplI	GAGNNNNNCTC	2 cut(s)	68, 100
BpmI	CTGGAG	2 cut(s)	1033, 1728
Bpu10I	CCTNAGC	2 cut(s)	1320, 1618
Bpu14I	TTCGAA	1 cut(s)	669
BpuEI	CTTGAG	1 cut(s)	1054
BpuMI	CCSGG	1 cut(s)	511
Bsa29I	ATCGAT	2 cut(s)	305, 1795
BsaAI	YACGTR	2 cut(s)	608, 1191
BsaJI	CCNNGG	3 cut(s)	837, 1090, 1256
Bsc4I	CCNNNNNNNGG	2 cut(s)	830, 1355
Bse1I	ACTGG	3 cut(s)	1050, 1285, 1343
Bse3DI	GCAATG	1 cut(s)	1387
BseBI	CCWGG	3 cut(s)	169, 825, 1258
BseCI	ATCGAT	2 cut(s)	305, 1795
BseDI	CCNNGG	3 cut(s)	837, 1090, 1256
BseGI	GGATG	2 cut(s)	865, 1800
BseLI	CCNNNNNNNGG	2 cut(s)	830, 1355
BseMI	GCAATG	1 cut(s)	1387
BseNI	ACTGG	3 cut(s)	1050, 1285, 1343
BseRI	GAGGAG	1 cut(s)	868
BseSI	GKGCMC	1 cut(s)	1420
BseYI	CCCAGC	1 cut(s)	1455
BshFI	GGCC	3 cut(s)	262, 519, 1095
BshNI	GGYRCC	1 cut(s)	833
BshVI	ATCGAT	2 cut(s)	305, 1795
BsiHKAI	GWGCWC	4 cut(s)	345, 650, 1420, 1752
BsiSI	CCGG	1 cut(s)	511
BslFI	GGGAC	3 cut(s)	109, 646, 1890
BslI	CCNNNNNNNGG	2 cut(s)	830, 1355
BsmAI	GTCTC	1 cut(s)	1321
BsmFI	GGGAC	3 cut(s)	109, 646, 1890
BsmI	GAATGC	2 cut(s)	685, 941
BsnI	GGCC	3 cut(s)	262, 519, 1095
Bsp119I	TTCGAA	1 cut(s)	669
Bsp1286I	GDGCHC	4 cut(s)	345, 650, 1420, 1752
Bsp1407I	TGTACA	1 cut(s)	653
BspACI	CCGC	7 cut(s)	56, 72, 103, 136, 1110, 1494, 1831
BspANI	GGCC	3 cut(s)	262, 519, 1095
BspDI	ATCGAT	2 cut(s)	305, 1795
BspLI	GGNNCC	3 cut(s)	520, 835, 1464
BspMAI	CTGCAG	1 cut(s)	1960
BspMI	ACCTGC	1 cut(s)	1963
BspPI	GGATC	5 cut(s)	1032, 1590, 1608, 1791, 1940
BspT104I	TTCGAA	1 cut(s)	669
BspT107I	GGYRCC	1 cut(s)	833
BsrDI	GCAATG	1 cut(s)	1387
BsrGI	TGTACA	1 cut(s)	653
BsrI	ACTGG	3 cut(s)	1050, 1285, 1343
BssECI	CCNNGG	3 cut(s)	837, 1090, 1256
BssNAI	GTATAC	1 cut(s)	1528
BssSI	CACGAG	1 cut(s)	344
BssT1I	CCWWGG	2 cut(s)	837, 1090
Bst1107I	GTATAC	1 cut(s)	1528
Bst2BI	CACGAG	1 cut(s)	344
Bst2UI	CCWGG	3 cut(s)	169, 825, 1258
Bst4CI	ACNGT	4 cut(s)	403, 1161, 1396, 1766
Bst6I	CTCTTC	2 cut(s)	91, 1344
BstAUI	TGTACA	1 cut(s)	653
BstBAI	YACGTR	2 cut(s)	608, 1191
BstBI	TTCGAA	1 cut(s)	669
BstC8I	GCNNGC	2 cut(s)	580, 1315
BstF5I	GGATG	2 cut(s)	865, 1800
BstHHI	GCGC	2 cut(s)	187, 1842
BstMAI	GTCTC	1 cut(s)	1321
BstMWI	GCNNNNNNNGC	7 cut(s)	78, 142, 221, 1141, 1448, 1839, 1878
BstNI	CCWGG	3 cut(s)	169, 825, 1258
BstNSI	RCATGY	4 cut(s)	136, 488, 1003, 1317
BstPAI	GACNNNNGTC	1 cut(s)	290
BstSCI	CCNGG	4 cut(s)	167, 509, 823, 1256
BstSFI	CTRYAG	4 cut(s)	205, 219, 687, 1956
BstSLI	GKGCMC	1 cut(s)	1420
BstV2I	GAAGAC	3 cut(s)	502, 1045, 1767
BstX2I	RGATCY	2 cut(s)	348, 1024
BstYI	RGATCY	2 cut(s)	348, 1024
BstZ17I	GTATAC	1 cut(s)	1528
Bsu15I	ATCGAT	2 cut(s)	305, 1795
BsuRI	GGCC	3 cut(s)	262, 519, 1095
BsuTUI	ATCGAT	2 cut(s)	305, 1795
BtrI	CACGTC	1 cut(s)	31
BtsCI	GGATG	2 cut(s)	865, 1800
BtsIMutI	CAGTG	3 cut(s)	804, 1057, 1157
BveI	ACCTGC	1 cut(s)	1963
Cac8I	GCNNGC	2 cut(s)	580, 1315
CaiI	CAGNNNCTG	2 cut(s)	1650, 1964
CfoI	GCGC	2 cut(s)	187, 1842
Cfr13I	GGNCC	2 cut(s)	518, 1564
ClaI	ATCGAT	2 cut(s)	305, 1795
CseI	GACGC	1 cut(s)	1892
Csp6I	GTAC	4 cut(s)	654, 1251, 1392, 1397
CviAII	CATG	9 cut(s)	133, 337, 415, 485, 622, 761, 1000, 1314, 1681
CviQI	GTAC	4 cut(s)	654, 1251, 1392, 1397
DraIII	CACNNNGTG	1 cut(s)	1163
DrdI	GACNNNNNNGTC	2 cut(s)	89, 440
DseDI	GACNNNNNNGTC	2 cut(s)	89, 440
EaeI	YGGCCR	1 cut(s)	1093
Eam1104I	CTCTTC	2 cut(s)	91, 1344
EarI	CTCTTC	2 cut(s)	91, 1344
EciI	GGCGGA	2 cut(s)	71, 1099
Ecl136II	GAGCTC	1 cut(s)	648
Eco130I	CCWWGG	2 cut(s)	837, 1090
Eco147I	AGGCCT	1 cut(s)	262
Eco24I	GRGCYC	1 cut(s)	650
Eco32I	GATATC	1 cut(s)	309
Eco47I	GGWCC	1 cut(s)	1564
Eco53kI	GAGCTC	1 cut(s)	648
Eco57I	CTGAAG	1 cut(s)	272
Eco72I	CACGTG	1 cut(s)	608
EcoICRI	GAGCTC	1 cut(s)	648
EcoRII	CCWGG	3 cut(s)	167, 823, 1256
EcoRV	GATATC	1 cut(s)	309
EcoT14I	CCWWGG	2 cut(s)	837, 1090
EcoT22I	ATGCAT	1 cut(s)	416
EcoT38I	GRGCYC	1 cut(s)	650
ErhI	CCWWGG	2 cut(s)	837, 1090
FaeI	CATG	9 cut(s)	136, 340, 418, 488, 625, 764, 1003, 1317, 1684
FalI	AAGNNNNNCTT	6 cut(s)	487, 519, 650, 682, 1817, 1849
FaqI	GGGAC	3 cut(s)	109, 646, 1890
FatI	CATG	9 cut(s)	132, 336, 414, 484, 621, 760, 999, 1313, 1680
FauI	CCCGC	2 cut(s)	129, 1501
FauNDI	CATATG	2 cut(s)	1611, 1978
FbaI	TGATCA	2 cut(s)	1165, 1717
FblI	GTMKAC	1 cut(s)	1527
FokI	GGATG	2 cut(s)	872, 1787
FriOI	GRGCYC	1 cut(s)	650
FspBI	CTAG	6 cut(s)	440, 774, 873, 996, 1274, 1443
GlaI	GCGC	2 cut(s)	186, 1841
GsaI	CCCAGC	1 cut(s)	1459
GsuI	CTGGAG	2 cut(s)	1033, 1728
HaeIII	GGCC	3 cut(s)	262, 519, 1095
HapII	CCGG	1 cut(s)	511
HgaI	GACGC	1 cut(s)	1892
HhaI	GCGC	2 cut(s)	187, 1842
Hin1II	CATG	9 cut(s)	136, 340, 418, 488, 625, 764, 1003, 1317, 1684
Hin6I	GCGC	2 cut(s)	185, 1840
HinP1I	GCGC	2 cut(s)	185, 1840
HincII	GTYRAC	3 cut(s)	613, 907, 1369
HindII	GTYRAC	3 cut(s)	613, 907, 1369
HindIII	AAGCTT	1 cut(s)	879
HinfI	GANTC	9 cut(s)	83, 161, 389, 638, 1007, 1046, 1063, 1576, 1590
HpaI	GTTAAC	2 cut(s)	613, 1369
HpaII	CCGG	1 cut(s)	511
HphI	GGTGA	3 cut(s)	813, 1425, 1944
Hpy166II	GTNNAC	6 cut(s)	406, 613, 907, 1369, 1418, 1528
Hpy188I	TCNGA	8 cut(s)	433, 645, 852, 1102, 1300, 1519, 1575, 1587
Hpy188III	TCNNGA	8 cut(s)	94, 193, 312, 386, 1119, 1474, 1580, 1745
Hpy8I	GTNNAC	6 cut(s)	406, 613, 907, 1369, 1418, 1528
Hpy99I	CGWCG	2 cut(s)	95, 127
HpyAV	CCTTC	4 cut(s)	58, 247, 1858, 1959
HpyCH4III	ACNGT	4 cut(s)	403, 1161, 1396, 1766
HpyCH4IV	ACGT	3 cut(s)	30, 607, 1190
HpyF10VI	GCNNNNNNNGC	7 cut(s)	78, 142, 221, 1141, 1448, 1839, 1878
HpySE526I	ACGT	3 cut(s)	30, 607, 1190
Hsp92II	CATG	9 cut(s)	136, 340, 418, 488, 625, 764, 1003, 1317, 1684
HspAI	GCGC	2 cut(s)	185, 1840
Ksp22I	TGATCA	2 cut(s)	1165, 1717
KspAI	GTTAAC	2 cut(s)	613, 1369
LmnI	GCTCC	4 cut(s)	340, 938, 1018, 1747
LweI	GCATC	3 cut(s)	90, 1093, 1841
MaeI	CTAG	6 cut(s)	440, 774, 873, 996, 1274, 1443
MaeII	ACGT	3 cut(s)	30, 607, 1190
MaeIII	GTNAC	3 cut(s)	884, 1069, 1555
MboII	GAAGA	9 cut(s)	73, 78, 469, 507, 727, 1050, 1331, 1493, 1772
MfeI	CAATTG	2 cut(s)	1019, 1437
MflI	RGATCY	2 cut(s)	348, 1024
MhlI	GDGCHC	4 cut(s)	345, 650, 1420, 1752
MlsI	TGGCCA	1 cut(s)	1095
MluCI	AATT	7 cut(s)	393, 699, 749, 973, 1019, 1437, 1786
MluNI	TGGCCA	1 cut(s)	1095
MlyI	GAGTC	3 cut(s)	77, 155, 1040
MmeI	TCCRAC	2 cut(s)	517, 1285
Mox20I	TGGCCA	1 cut(s)	1095
Mph1103I	ATGCAT	1 cut(s)	416
MscI	TGGCCA	1 cut(s)	1095
MseI	TTAA	5 cut(s)	233, 612, 1368, 1773, 1987
MslI	CAYNNNNRTG	5 cut(s)	137, 591, 765, 1101, 1755
Msp20I	TGGCCA	1 cut(s)	1095
MspA1I	CMGCKG	1 cut(s)	1451
MspI	CCGG	1 cut(s)	511
MspR9I	CCNGG	4 cut(s)	169, 511, 825, 1258
MunI	CAATTG	2 cut(s)	1019, 1437
Mva1269I	GAATGC	2 cut(s)	685, 941
MvaI	CCWGG	3 cut(s)	169, 825, 1258
MwoI	GCNNNNNNNGC	7 cut(s)	78, 142, 221, 1141, 1448, 1839, 1878
NciI	CCSGG	1 cut(s)	511
NdeI	CATATG	2 cut(s)	1611, 1978
NlaIII	CATG	9 cut(s)	136, 340, 418, 488, 625, 764, 1003, 1317, 1684
NlaIV	GGNNCC	3 cut(s)	520, 835, 1464
NmuCI	GTSAC	1 cut(s)	884
NsiI	ATGCAT	1 cut(s)	416
NspI	RCATGY	4 cut(s)	136, 488, 1003, 1317
NspV	TTCGAA	1 cut(s)	669
PaeI	GCATGC	1 cut(s)	1317
PaqCI	CACCTGC	1 cut(s)	1963
PceI	AGGCCT	1 cut(s)	262
PctI	GAATGC	2 cut(s)	685, 941
PfeI	GAWTC	6 cut(s)	389, 638, 1007, 1063, 1576, 1590
PleI	GAGTC	3 cut(s)	77, 155, 1040
PmaCI	CACGTG	1 cut(s)	608
PmlI	CACGTG	1 cut(s)	608
PpsI	GAGTC	3 cut(s)	77, 155, 1040
Ppu21I	YACGTR	2 cut(s)	608, 1191
PshAI	GACNNNNGTC	1 cut(s)	290
PsiI	TTATAA	1 cut(s)	371
Psp124BI	GAGCTC	1 cut(s)	650
Psp6I	CCWGG	3 cut(s)	167, 823, 1256
PspCI	CACGTG	1 cut(s)	608
PspFI	CCCAGC	1 cut(s)	1455
PspGI	CCWGG	3 cut(s)	167, 823, 1256
PspN4I	GGNNCC	3 cut(s)	520, 835, 1464
PspPI	GGNCC	2 cut(s)	518, 1564
PstI	CTGCAG	1 cut(s)	1960
PstNI	CAGNNNCTG	2 cut(s)	1650, 1964
PsuI	RGATCY	2 cut(s)	348, 1024
PvuII	CAGCTG	1 cut(s)	1451
RsaI	GTAC	4 cut(s)	655, 1252, 1393, 1398
RsaNI	GTAC	4 cut(s)	654, 1251, 1392, 1397
RseI	CAYNNNNRTG	5 cut(s)	137, 591, 765, 1101, 1755
SacI	GAGCTC	1 cut(s)	650
SaqAI	TTAA	5 cut(s)	233, 612, 1368, 1773, 1987
Sau96I	GGNCC	2 cut(s)	518, 1564
ScaI	AGTACT	1 cut(s)	1252
SchI	GAGTC	3 cut(s)	77, 155, 1040
ScrFI	CCNGG	4 cut(s)	169, 511, 825, 1258
SduI	GDGCHC	4 cut(s)	345, 650, 1420, 1752
SfaNI	GCATC	3 cut(s)	90, 1093, 1841
SfcI	CTRYAG	4 cut(s)	205, 219, 687, 1956
SfuI	TTCGAA	1 cut(s)	669
SinI	GGWCC	1 cut(s)	1564
SmiMI	CAYNNNNRTG	5 cut(s)	137, 591, 765, 1101, 1755
SmlI	CTYRAG	1 cut(s)	1033
SmoI	CTYRAG	1 cut(s)	1033
SpeI	ACTAGT	1 cut(s)	872
SphI	GCATGC	1 cut(s)	1317
Sse9I	AATT	7 cut(s)	393, 699, 749, 973, 1019, 1437, 1786
SseBI	AGGCCT	1 cut(s)	262
SsiI	CCGC	7 cut(s)	56, 72, 103, 136, 1110, 1494, 1831
SspI	AATATT	1 cut(s)	361
SspMI	CTAG	6 cut(s)	440, 774, 873, 996, 1274, 1443
SstI	GAGCTC	1 cut(s)	650
StuI	AGGCCT	1 cut(s)	262
StyD4I	CCNGG	4 cut(s)	167, 509, 823, 1256
StyI	CCWWGG	2 cut(s)	837, 1090
TaaI	ACNGT	4 cut(s)	403, 1161, 1396, 1766
TaiI	ACGT	3 cut(s)	33, 610, 1193
TaqI	TCGA	6 cut(s)	294, 305, 669, 1066, 1603, 1795
TasI	AATT	7 cut(s)	393, 699, 749, 973, 1019, 1437, 1786
TatI	WGTACW	2 cut(s)	653, 1250
TauI	GCSGC	1 cut(s)	75
TfiI	GAWTC	6 cut(s)	389, 638, 1007, 1063, 1576, 1590
Tru1I	TTAA	5 cut(s)	233, 612, 1368, 1773, 1987
Tru9I	TTAA	5 cut(s)	233, 612, 1368, 1773, 1987
TscAI	CASTG	3 cut(s)	811, 1057, 1164
TseFI	GTSAC	1 cut(s)	884
Tsp45I	GTSAC	1 cut(s)	884
TspDTI	ATGAA	6 cut(s)	143, 738, 813, 922, 1493, 1773
TspGWI	ACGGA	2 cut(s)	79, 1797
TspRI	CASTG	3 cut(s)	811, 1057, 1164
VneI	GTGCAC	1 cut(s)	1416
VpaK11BI	GGWCC	1 cut(s)	1564
XapI	RAATTY	4 cut(s)	699, 749, 973, 1786
XceI	RCATGY	4 cut(s)	136, 488, 1003, 1317
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1301, 1558
XmiI	GTMKAC	1 cut(s)	1527
XspI	CTAG	6 cut(s)	440, 774, 873, 996, 1274, 1443
ZrmI	AGTACT	1 cut(s)	1252
Zsp2I	ATGCAT	1 cut(s)	416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.