negative regulation of pre-miRNA processing
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51130 AT5G51130 |
| fragaria_vesca | FvH4_1g05710 FvH4_1g05710 |
| malus_domestica | MD02G1058100.v1.1 MD02G1058200.v1.1 MD15G1192600.v1.1 |
| prunus_persica | Prupe.7G224700_v2.0.a1 |
| pyrus_communis | pycom02g04720 pycom15g17230 |
| rosa_chinensis | RchiOBHm_Chr2g0091361 |
| rosa_laevigata | RLG00000016215 |
| rosa_multiflora | Rmu_sc0002270.1_g000052 |
| rosa_roxburghii | Rroxscaffold_1G00004170 Rroxscaffold_2G00126060 Rroxscaffold_2G00150180 Rroxscaffold_2G00152470 |
| rosa_rugosa | Rorug02G0016900 |
| rosa_samantha | Rh2AG061600 Rh2BG061000 Rh2CG063100 Rh2CG415600 Rh2DG061600 Rh5AG127900 Rh7BG272900 |
| rosa_wichuraiana | Rw2G004810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 31 |
| AccII | CGCG | 1 cut(s) | 42 |
| AcsI | RAATTY | 1 cut(s) | 234 |
| AgsI | TTSAA | 1 cut(s) | 232 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 132, 164 |
| AluBI | AGCT | 3 cut(s) | 9, 111, 181 |
| AluI | AGCT | 3 cut(s) | 9, 111, 181 |
| ApoI | RAATTY | 1 cut(s) | 234 |
| AspLEI | GCGC | 2 cut(s) | 32, 42 |
| BceAI | ACGGC | 1 cut(s) | 133 |
| BciVI | GTATCC | 1 cut(s) | 202 |
| BfuI | GTATCC | 1 cut(s) | 202 |
| BseRI | GAGGAG | 1 cut(s) | 50 |
| Bsh1236I | CGCG | 1 cut(s) | 42 |
| Bsp143I | GATC | 1 cut(s) | 60 |
| BspFNI | CGCG | 1 cut(s) | 42 |
| BssMI | GATC | 1 cut(s) | 60 |
| Bst4CI | ACNGT | 1 cut(s) | 214 |
| BstDEI | CTNAG | 1 cut(s) | 185 |
| BstFNI | CGCG | 1 cut(s) | 42 |
| BstHHI | GCGC | 2 cut(s) | 32, 42 |
| BstKTI | GATC | 1 cut(s) | 63 |
| BstMBI | GATC | 1 cut(s) | 60 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 46, 55, 117 |
| BstUI | CGCG | 1 cut(s) | 42 |
| BsuI | GTATCC | 1 cut(s) | 202 |
| BtsI | GCAGTG | 1 cut(s) | 172 |
| BtsIMutI | CAGTG | 1 cut(s) | 172 |
| CfoI | GCGC | 2 cut(s) | 32, 42 |
| CviAII | CATG | 1 cut(s) | 53 |
| CviJI | RGCY | 4 cut(s) | 9, 111, 120, 181 |
| CviKI_1 | RGCY | 4 cut(s) | 9, 111, 120, 181 |
| DdeI | CTNAG | 1 cut(s) | 185 |
| DpnI | GATC | 1 cut(s) | 62 |
| DpnII | GATC | 1 cut(s) | 60 |
| FaeI | CATG | 1 cut(s) | 56 |
| FaiI | YATR | 4 cut(s) | 54, 135, 206, 225 |
| FatI | CATG | 1 cut(s) | 52 |
| FspI | TGCGCA | 1 cut(s) | 31 |
| GlaI | GCGC | 2 cut(s) | 31, 41 |
| HhaI | GCGC | 2 cut(s) | 32, 42 |
| Hin1II | CATG | 1 cut(s) | 56 |
| Hin6I | GCGC | 2 cut(s) | 30, 40 |
| HinP1I | GCGC | 2 cut(s) | 30, 40 |
| HindIII | AAGCTT | 1 cut(s) | 179 |
| Hpy188I | TCNGA | 1 cut(s) | 195 |
| Hpy188III | TCNNGA | 1 cut(s) | 152 |
| HpyCH4III | ACNGT | 1 cut(s) | 214 |
| HpyCH4V | TGCA | 2 cut(s) | 165, 170 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 46, 55, 117 |
| HpyF3I | CTNAG | 1 cut(s) | 185 |
| Hsp92II | CATG | 1 cut(s) | 56 |
| HspAI | GCGC | 2 cut(s) | 30, 40 |
| Kzo9I | GATC | 1 cut(s) | 60 |
| LmnI | GCTCC | 1 cut(s) | 37 |
| LpnPI | CCDG | 2 cut(s) | 19, 137 |
| MalI | GATC | 1 cut(s) | 62 |
| MboI | GATC | 1 cut(s) | 60 |
| MboII | GAAGA | 1 cut(s) | 34 |
| MluCI | AATT | 3 cut(s) | 129, 141, 234 |
| MmeI | TCCRAC | 1 cut(s) | 173 |
| MnlI | CCTC | 1 cut(s) | 28 |
| MseI | TTAA | 1 cut(s) | 241 |
| MvnI | CGCG | 1 cut(s) | 42 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 46, 55, 117 |
| NdeII | GATC | 1 cut(s) | 60 |
| NlaIII | CATG | 1 cut(s) | 56 |
| NsbI | TGCGCA | 1 cut(s) | 31 |
| SaqAI | TTAA | 1 cut(s) | 241 |
| Sau3AI | GATC | 1 cut(s) | 60 |
| SetI | ASST | 3 cut(s) | 11, 113, 183 |
| SgeI | CNNG | 5 cut(s) | 18, 53, 65, 137, 164 |
| Sse9I | AATT | 3 cut(s) | 129, 141, 234 |
| TaaI | ACNGT | 1 cut(s) | 214 |
| TasI | AATT | 3 cut(s) | 129, 141, 234 |
| Tru1I | TTAA | 1 cut(s) | 241 |
| Tru9I | TTAA | 1 cut(s) | 241 |
| TscAI | CASTG | 1 cut(s) | 172 |
| TspGWI | ACGGA | 2 cut(s) | 91, 111 |
| TspRI | CASTG | 1 cut(s) | 172 |
| XapI | RAATTY | 1 cut(s) | 234 |