Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0003386

Physical Location & Seq

Genomic Coordinates Forward (+)

13084155 .. 13091774

Gene Structure 7620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1156800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGGGCATAGTAACTTTACCGCCACTCCCACCACCGCCACCAAAGGGTAATCTTCATCATCGTCACCACTCAATTGATTCAGAAAACTACTCCAATCCTCCTAATTCTATGTCCCAAGACTACCACCAAGGCATCTTCACTTTCTCCAATGGCTTCGAGAGATCGGCTATGACAACTCACCAAGAACAACAGCAGCAGCAGCAACACCACTTGGCACAGCAGATCCGGAGGGAAAAGCTGAGGGTGCAAGGCTTCGAAACCCCTCCCCCGCCGCCACTGGTTGGCCTAAACGAGGAAGAATCCAGTGGCCTCCCAGCATACGAAACCGCTGGGATGTTGTCTGAGATGTTCAATTACCCTCCAGGCGGTGGCCCTGTTGGGGCCGCCGAACTGCTAGAACATCCAATGTCAGCCAATTATCGGATGATGCCTCGGCCGCAGCAGGCTGCAGCAGTGTCTGCTGCGGCTGACTGGTACGGAAGAGTGGGTGGTGGTGGATTGGGACCATTGGGAGATTCAAAAAATCAGCACCATCATCAGATTTCAACAATTAATGCAGACTCAGCGGCAGCCATGCAGCTTTTTCTAATGAACCCATCACAACCAAGATCGCCTTCTCCTCCTCCTTCTCACACCACTTCTTCCACCCTTCACATGTTGCTTCCAAACCCTTCCACCACCACCAATTCACTCCAAGGGTTTGCTGCCGCATCCGGTGGAGGGGCTTTTGGTCAATTCACTTGGGTCCCTGAGAGTCATCAAGGCCATGAAGCAGGAGGCAATACCGCTGGCGGCGGTGGTGAAATTGGTGGGGTTGTGGAAGGCCAAGGACTTTCATTGTCTCTATCAACTTCTTTGCAGCACTTGGAGGCAGCAAAGGCTGAGGAATTCAGGATGGGATCAGATAGTGCTAGTGGCTTGCTGTATTACAATAATCAAGGAGATCATCAACATCAAGGGTCTAATCCTCAGTATAAGAATTTGGGTTCCCATCATCATCAGGCATTGCATAGTTTGCAGCAAGGCGGCGTTGTAGGCGGTCATCACGTCAGTTTCGGGTCGTCGTCGTCCTTCGGGGTTGTGAACGTGTTGAGGAACTCCAAGTATGTGAAGGCTGCCCAAGAATTGTTGGAAGAGTTTTGCAGTGTGGGGAGGGGTCAGCTCAAGAAGAACAAGTTTGGTGGTAGTACAAGTGGTAGGCAGAACACCACCACAAACCCTAGTTCTAATCCAGCTAGTGGCGGTGGCGGTGATGGTGGTGCCTCTTCATCTTCATCAAAGGATGTGCCTCCGTTGTCAGCCGCTGATAGGATTGAACATCAACGAAGGAAAGTCAAACTATTGTCCATGATTGATGAGGTGGATCGAAGGTACAATCACTACTGCGAACAAATGCAGATGGTGGTAAACGCATTCGATCTGGTGATGGGTTTCGGAGCAGCGGTGCCGTACACAGCTCTAGCACAAAAGGCCATGTCACGGCATTTTCGGTGCCTAAAGGACGCGATCGCGGCACAGTTGAAGCACAGCTGTGAGCTAATTGGAGAGAAAGATGGTGCGGGGACCTCAGGAATAACAAAAGGAGAGACCCCGAGGCTGAAGCTGCTAGAGCAAAGCCTAAGGCAGCAAAGAGCATTTCATCAAATGGGCATGATGGAACAAGAAGCTTGGAGGCCACAACGAGGCCTGCCGGAACGCTCAGTCAACATCTTGAGAGCCTGGCTTTTTGAGCATTTTCTTCACCCGTATCCAAGCGATGCTGATAAGCATCTGTTGGCTCGACAGACTGGTCTGTCCAGAAATCAGGTCTCAAATTGGTTCATAAATGCTAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAGCAAGAAGCCAATGAAGAAGAAGAAGTAGGAGAAGGAGGAGTAGGAGGAGCTACTAGTGCAGCAGCAGATCAAGAGAGAGAACGTAACAGCAATGCTGGCCTCGCTGCACAAACTCCAACGCCTACAACGACAACAACAACAACAACAAAAAATTCGCCAGCAAGCAAAAGATCCGATATCAATGCCTCTGAAAACGACCCTTCACTCGTAGCAATCAATAGGCATCAGCAGCAGCACCACCACCACCCTATGATGGCCACCACCACCTCTACTACGGTGGCTTCTCCTGCGTACCAGTGCTTCCCCGCCGCAGCTTCCGATGACACGTGTCGAAGTTACGGGACCACCTCGGCTAATGCAAATATTGCAGCTCATCATGATCATCAAAATAGTAGTAATATCGATTCTTCTACTACGCTTATAAGCTTCGGGACCACCACGGCAGCTGGTGACGTGTCACTCACTCTAGGGCTTCGTCACGCTGGTGGTGGTGGTGGAAACAATATGCCCGACAAGACTTCTTCTTCTTTCTCCATTAGAGACTTCGGGGGCTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009889 GO:0009965 GO:0010016 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

810

Amino Acids

86.79

Weight (kDa)

6.55

Isoelectric Point (pI)

50.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	363 - 504	5.9e-47	Associated with HOX
Homeobox_KN	PF05920	574 - 613	5.9e-19	Homeobox KN domain
Homeodomain	PF00046	581 - 613	1.6e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003386)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23760 AT2G23760 AT2G23760 AT2G23760 AT4G36870 AT4G36870 AT4G36870 AT4G36870
fragaria_vesca	FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14721
malus_domestica	MD02G1156800.v1.1 MD15G1271200.v1.1
prunus_persica	Prupe.7G146900_v2.0.a1 Prupe.7G146900_v2.0.a1
pyrus_communis	pycom02g12380 pycom02g12390 pycom15g23510
rosa_chinensis	RchiOBHm_Chr2g0102991
rosa_laevigata	RLG00000017198
rosa_multiflora	Rmu_sc0000388.1_g000020
rosa_roxburghii	Rroxscaffold_2G00140020
rosa_rugosa	Rorug02G0111200 Rorug02G0111300 Rorug02G0111300
rosa_samantha	Rh2AG159400 Rh2BG165900 Rh2CG166100 Rh2DG164800
rosa_wichuraiana	Rw2G012450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2294
AasI	GACNNNNNNGTC	2 cut(s)	1788, 1792
AccB1I	GGYRCC	3 cut(s)	1259, 1444, 1491
AccB7I	CCANNNNNTGG	3 cut(s)	281, 368, 1238
AccII	CGCG	2 cut(s)	1505, 1511
AccIII	TCCGGA	1 cut(s)	225
AclWI	GGATC	4 cut(s)	217, 907, 1371, 2037
AcoI	YGGCCR	2 cut(s)	434, 2127
AcsI	RAATTY	3 cut(s)	887, 979, 2023
AcuI	CTGAAG	1 cut(s)	1619
AcvI	CACGTG	1 cut(s)	2199
AfaI	GTAC	6 cut(s)	476, 1189, 1373, 1451, 1868, 2165
AflIII	ACRYGT	5 cut(s)	654, 1086, 2196, 2198, 2325
AgsI	TTSAA	5 cut(s)	352, 519, 546, 1316, 1522
AhlI	ACTAGT	1 cut(s)	1925
AjiI	CACGTC	2 cut(s)	1048, 2326
AjnI	CCWGG	2 cut(s)	361, 1718
AjuI	GAANNNNNNNTTGG	2 cut(s)	598, 630
AleI	CACNNNNGTG	2 cut(s)	1530, 2355
Alw26I	GTCTC	4 cut(s)	846, 1580, 1813, 2406
AlwI	GGATC	4 cut(s)	217, 907, 1371, 2037
AlwNI	CAGNNNCTG	2 cut(s)	458, 1304
Ama87I	CYCGRG	1 cut(s)	1591
Aor13HI	TCCGGA	1 cut(s)	225
ApoI	RAATTY	3 cut(s)	887, 979, 2023
AseI	ATTAAT	1 cut(s)	552
AsiSI	GCGATCGC	1 cut(s)	1509
AspS9I	GGNCC	7 cut(s)	371, 381, 503, 745, 1563, 2214, 2304
AsuHPI	GGTGA	7 cut(s)	56, 170, 812, 1262, 1435, 1733, 2333
AsuII	TTCGAA	1 cut(s)	255
AvaI	CYCGRG	1 cut(s)	1591
AvaII	GGWCC	5 cut(s)	503, 745, 1563, 2214, 2304
AxyI	CCTNAGG	2 cut(s)	1567, 1619
BalI	TGGCCA	1 cut(s)	2129
BanI	GGYRCC	3 cut(s)	1259, 1444, 1491
BarI	GAAGNNNNNNTAC	2 cut(s)	2156, 2188
BbrPI	CACGTG	1 cut(s)	2199
BbvCI	CCTCAGC	2 cut(s)	239, 882
BceAI	ACGGC	3 cut(s)	1432, 1496, 2328
BcgI	CGANNNNNNTGC	2 cut(s)	2036, 2070
BciT130I	CCWGG	2 cut(s)	363, 1720
BciVI	GTATCC	1 cut(s)	1758
BclI	TGATCA	1 cut(s)	2251
BcoDI	GTCTC	4 cut(s)	846, 1580, 1813, 2406
BcuI	ACTAGT	1 cut(s)	1925
BfaI	CTAG	9 cut(s)	395, 912, 1221, 1236, 1460, 1607, 1830, 1926, 2339
BfmI	CTRYAG	1 cut(s)	447
BfuI	GTATCC	1 cut(s)	1758
Bme1390I	CCNGG	2 cut(s)	363, 1720
Bme18I	GGWCC	5 cut(s)	503, 745, 1563, 2214, 2304
BmeT110I	CYCGRG	1 cut(s)	1591
BmgBI	CACGTC	2 cut(s)	1048, 2326
BmgT120I	GGNCC	7 cut(s)	371, 381, 503, 745, 1563, 2214, 2304
BmrFI	CCNGG	2 cut(s)	363, 1720
BmsI	GCATC	6 cut(s)	141, 417, 719, 1747, 1777, 2104
BoxI	GACNNNNGTC	1 cut(s)	2199
BpmI	CTGGAG	1 cut(s)	345
Bpu10I	CCTNAGC	2 cut(s)	239, 882
Bpu14I	TTCGAA	1 cut(s)	255
BpuEI	CTTGAG	2 cut(s)	1148, 1732
Bsa29I	ATCGAT	1 cut(s)	2274
BsaAI	YACGTR	1 cut(s)	2199
BsaBI	GATNNNNATC	1 cut(s)	1767
BsaI	GGTCTC	2 cut(s)	1580, 1813
BsaJI	CCNNGG	8 cut(s)	127, 431, 694, 826, 1592, 1851, 2220, 2310
BsaWI	WCCGGW	2 cut(s)	225, 713
BsaXI	ACNNNNNCTCC	4 cut(s)	9, 39, 1428, 1458
Bse1I	ACTGG	5 cut(s)	282, 303, 476, 1792, 2167
Bse21I	CCTNAGG	2 cut(s)	1567, 1619
Bse3DI	GCAATG	2 cut(s)	1004, 1969
Bse8I	GATNNNNATC	1 cut(s)	1767
BseAI	TCCGGA	1 cut(s)	225
BseBI	CCWGG	2 cut(s)	363, 1720
BseCI	ATCGAT	1 cut(s)	2274
BseDI	CCNNGG	8 cut(s)	127, 431, 694, 826, 1592, 1851, 2220, 2310
BseGI	GGATG	6 cut(s)	339, 400, 429, 710, 900, 1288
BseJI	GATNNNNATC	1 cut(s)	1767
BseMI	GCAATG	2 cut(s)	1004, 1969
BseMII	CTCAG	8 cut(s)	230, 333, 576, 741, 873, 983, 1581, 1713
BseNI	ACTGG	5 cut(s)	282, 303, 476, 1792, 2167
BseRI	GAGGAG	4 cut(s)	609, 612, 1923, 1932
BseX3I	CGGCCG	1 cut(s)	434
BseYI	CCCAGC	2 cut(s)	313, 329
BsgI	GTGCAG	2 cut(s)	1950, 1962
Bsh1236I	CGCG	2 cut(s)	1505, 1511
Bsh1285I	CGRYCG	2 cut(s)	437, 1509
BshNI	GGYRCC	3 cut(s)	1259, 1444, 1491
BshVI	ATCGAT	1 cut(s)	2274
BsiEI	CGRYCG	2 cut(s)	437, 1509
BsiHKCI	CYCGRG	1 cut(s)	1591
BsiSI	CCGG	3 cut(s)	226, 714, 1691
BslFI	GGGAC	6 cut(s)	97, 516, 731, 1576, 2227, 2317
BsmAI	GTCTC	4 cut(s)	846, 1580, 1813, 2406
BsmFI	GGGAC	6 cut(s)	97, 516, 731, 1576, 2227, 2317
BsmI	GAATGC	1 cut(s)	1412
Bso31I	GGTCTC	2 cut(s)	1580, 1813
BsoBI	CYCGRG	1 cut(s)	1591
Bsp119I	TTCGAA	1 cut(s)	255
Bsp13I	TCCGGA	1 cut(s)	225
Bsp19I	CCATGG	1 cut(s)	1851
BspCNI	CTCAG	8 cut(s)	231, 334, 575, 742, 874, 982, 1580, 1712
BspDI	ATCGAT	1 cut(s)	2274
BspEI	TCCGGA	1 cut(s)	225
BspFNI	CGCG	2 cut(s)	1505, 1511
BspHI	TCATGA	1 cut(s)	2248
BspMAI	CTGCAG	1 cut(s)	451
BspPI	GGATC	4 cut(s)	217, 907, 1371, 2037
BspT104I	TTCGAA	1 cut(s)	255
BspT107I	GGYRCC	3 cut(s)	1259, 1444, 1491
BspTNI	GGTCTC	2 cut(s)	1580, 1813
BsrDI	GCAATG	2 cut(s)	1004, 1969
BsrI	ACTGG	5 cut(s)	282, 303, 476, 1792, 2167
BssECI	CCNNGG	8 cut(s)	127, 431, 694, 826, 1592, 1851, 2220, 2310
BssT1I	CCWWGG	4 cut(s)	127, 694, 826, 1851
Bst2UI	CCWGG	2 cut(s)	363, 1720
Bst4CI	ACNGT	2 cut(s)	1518, 2149
Bst6I	CTCTTC	4 cut(s)	475, 1128, 1270, 1854
BstAPI	GCANNNNNTGC	3 cut(s)	458, 1015, 2237
BstBAI	YACGTR	1 cut(s)	2199
BstBI	TTCGAA	1 cut(s)	255
BstC8I	GCNNGC	7 cut(s)	444, 790, 920, 1688, 1969, 2031, 2035
BstDEI	CTNAG	9 cut(s)	239, 342, 562, 750, 882, 969, 1567, 1619, 1699
BstDSI	CCRYGG	2 cut(s)	1851, 2310
BstENI	CCTNNNNNAGG	1 cut(s)	290
BstF5I	GGATG	6 cut(s)	339, 400, 429, 710, 900, 1288
BstFNI	CGCG	2 cut(s)	1505, 1511
BstMAI	GTCTC	4 cut(s)	846, 1580, 1813, 2406
BstMCI	CGRYCG	2 cut(s)	437, 1509
BstNI	CCWGG	2 cut(s)	363, 1720
BstNSI	RCATGY	1 cut(s)	658
BstPAI	GACNNNNGTC	1 cut(s)	2199
BstSCI	CCNGG	2 cut(s)	361, 1718
BstSFI	CTRYAG	1 cut(s)	447
BstUI	CGCG	2 cut(s)	1505, 1511
BstX2I	RGATCY	2 cut(s)	222, 2042
BstYI	RGATCY	2 cut(s)	222, 2042
BstZI	CGGCCG	1 cut(s)	434
Bsu15I	ATCGAT	1 cut(s)	2274
Bsu36I	CCTNAGG	2 cut(s)	1567, 1619
BsuI	GTATCC	1 cut(s)	1758
BsuTUI	ATCGAT	1 cut(s)	2274
BtgI	CCRYGG	2 cut(s)	1851, 2310
BtgZI	GCGATG	1 cut(s)	1770
BtrI	CACGTC	2 cut(s)	1048, 2326
BtsCI	GGATG	6 cut(s)	339, 400, 429, 710, 900, 1288
BtsI	GCAGTG	2 cut(s)	459, 1150
BtsIMutI	CAGTG	5 cut(s)	275, 310, 459, 1150, 2174
Cac8I	GCNNGC	7 cut(s)	444, 790, 920, 1688, 1969, 2031, 2035
CaiI	CAGNNNCTG	2 cut(s)	458, 1304
CciI	TCATGA	1 cut(s)	2248
Cfr13I	GGNCC	7 cut(s)	371, 381, 503, 745, 1563, 2214, 2304
ClaI	ATCGAT	1 cut(s)	2274
CseI	GACGC	1 cut(s)	1511
Csp6I	GTAC	6 cut(s)	475, 1188, 1372, 1450, 1867, 2164
CspCI	CAANNNNNGTGG	2 cut(s)	1162, 1197
CviAII	CATG	8 cut(s)	574, 655, 767, 1348, 1474, 1651, 1852, 2249
CviQI	GTAC	6 cut(s)	475, 1188, 1372, 1450, 1867, 2164
DdeI	CTNAG	9 cut(s)	239, 342, 562, 750, 882, 969, 1567, 1619, 1699
DrdI	GACNNNNNNGTC	2 cut(s)	1788, 1792
DseDI	GACNNNNNNGTC	2 cut(s)	1788, 1792
EaeI	YGGCCR	2 cut(s)	434, 2127
EagI	CGGCCG	1 cut(s)	434
Eam1104I	CTCTTC	4 cut(s)	475, 1128, 1270, 1854
EarI	CTCTTC	4 cut(s)	475, 1128, 1270, 1854
EclXI	CGGCCG	1 cut(s)	434
Eco130I	CCWWGG	4 cut(s)	127, 694, 826, 1851
Eco147I	AGGCCT	1 cut(s)	1686
Eco31I	GGTCTC	2 cut(s)	1580, 1813
Eco32I	GATATC	1 cut(s)	2050
Eco47I	GGWCC	5 cut(s)	503, 745, 1563, 2214, 2304
Eco52I	CGGCCG	1 cut(s)	434
Eco57I	CTGAAG	1 cut(s)	1619
Eco72I	CACGTG	1 cut(s)	2199
Eco81I	CCTNAGG	2 cut(s)	1567, 1619
Eco88I	CYCGRG	1 cut(s)	1591
EcoNI	CCTNNNNNAGG	1 cut(s)	290
EcoO109I	RGGNCCY	2 cut(s)	745, 1563
EcoRI	GAATTC	1 cut(s)	887
EcoRII	CCWGG	2 cut(s)	361, 1718
EcoRV	GATATC	1 cut(s)	2050
EcoT14I	CCWWGG	4 cut(s)	127, 694, 826, 1851
ErhI	CCWWGG	4 cut(s)	127, 694, 826, 1851
FaeI	CATG	8 cut(s)	577, 658, 770, 1351, 1477, 1654, 1855, 2252
FalI	AAGNNNNNCTT	2 cut(s)	598, 630
FaqI	GGGAC	6 cut(s)	97, 516, 731, 1576, 2227, 2317
FatI	CATG	8 cut(s)	573, 654, 766, 1347, 1473, 1650, 1851, 2248
FauI	CCCGC	3 cut(s)	276, 1552, 2185
FbaI	TGATCA	1 cut(s)	2251
FokI	GGATG	6 cut(s)	346, 387, 436, 697, 907, 1295
FspBI	CTAG	9 cut(s)	395, 912, 1221, 1236, 1460, 1607, 1830, 1926, 2339
GsaI	CCCAGC	2 cut(s)	317, 333
GsuI	CTGGAG	1 cut(s)	345
HapII	CCGG	3 cut(s)	226, 714, 1691
HgaI	GACGC	1 cut(s)	1511
Hin1II	CATG	8 cut(s)	577, 658, 770, 1351, 1477, 1654, 1855, 2252
HincII	GTYRAC	1 cut(s)	1705
HindII	GTYRAC	1 cut(s)	1705
HindIII	AAGCTT	2 cut(s)	1665, 2296
HinfI	GANTC	6 cut(s)	77, 299, 515, 560, 754, 2276
HpaII	CCGG	3 cut(s)	226, 714, 1691
HphI	GGTGA	7 cut(s)	56, 170, 812, 1262, 1435, 1733, 2333
Hpy166II	GTNNAC	4 cut(s)	1084, 1408, 1452, 1705
Hpy188I	TCNGA	9 cut(s)	82, 343, 423, 540, 904, 1436, 2047, 2062, 2191
Hpy8I	GTNNAC	4 cut(s)	1084, 1408, 1452, 1705
Hpy99I	CGWCG	2 cut(s)	1066, 1069
HpyCH4III	ACNGT	2 cut(s)	1518, 2149
HpyCH4IV	ACGT	5 cut(s)	1047, 1086, 1954, 2198, 2325
HpyF3I	CTNAG	9 cut(s)	239, 342, 562, 750, 882, 969, 1567, 1619, 1699
HpySE526I	ACGT	5 cut(s)	1047, 1086, 1954, 2198, 2325
Hsp92II	CATG	8 cut(s)	577, 658, 770, 1351, 1477, 1654, 1855, 2252
KflI	GGGWCCC	1 cut(s)	745
Kpn2I	TCCGGA	1 cut(s)	225
Ksp22I	TGATCA	1 cut(s)	2251
LmnI	GCTCC	2 cut(s)	1436, 1919
LweI	GCATC	6 cut(s)	141, 417, 719, 1747, 1777, 2104
MaeI	CTAG	9 cut(s)	395, 912, 1221, 1236, 1460, 1607, 1830, 1926, 2339
MaeII	ACGT	5 cut(s)	1047, 1086, 1954, 2198, 2325
MaeIII	GTNAC	8 cut(s)	10, 62, 1476, 1955, 2207, 2321, 2328, 2348
MfeI	CAATTG	1 cut(s)	72
MflI	RGATCY	2 cut(s)	222, 2042
MlsI	TGGCCA	1 cut(s)	2129
MluNI	TGGCCA	1 cut(s)	2129
MlyI	GAGTC	2 cut(s)	554, 763
MmeI	TCCRAC	2 cut(s)	1110, 2012
Mox20I	TGGCCA	1 cut(s)	2129
MroI	TCCGGA	1 cut(s)	225
MscI	TGGCCA	1 cut(s)	2129
MseI	TTAA	1 cut(s)	552
MslI	CAYNNNNRTG	2 cut(s)	1530, 2355
Msp20I	TGGCCA	1 cut(s)	2129
MspA1I	CMGCKG	7 cut(s)	329, 566, 788, 1304, 1442, 1530, 2318
MspI	CCGG	3 cut(s)	226, 714, 1691
MspR9I	CCNGG	2 cut(s)	363, 1720
MunI	CAATTG	1 cut(s)	72
Mva1269I	GAATGC	1 cut(s)	1412
MvaI	CCWGG	2 cut(s)	363, 1720
MvnI	CGCG	2 cut(s)	1505, 1511
NcoI	CCATGG	1 cut(s)	1851
NlaIII	CATG	8 cut(s)	577, 658, 770, 1351, 1477, 1654, 1855, 2252
NmeAIII	GCCGAG	2 cut(s)	412, 2201
NmuCI	GTSAC	5 cut(s)	62, 1476, 2321, 2328, 2348
NspI	RCATGY	1 cut(s)	658
NspV	TTCGAA	1 cut(s)	255
OliI	CACNNNNGTG	2 cut(s)	1530, 2355
PagI	TCATGA	1 cut(s)	2248
PceI	AGGCCT	1 cut(s)	1686
PciI	ACATGT	1 cut(s)	654
PcsI	WCGNNNNNNNCGW	1 cut(s)	1997
PctI	GAATGC	1 cut(s)	1412
PfeI	GAWTC	4 cut(s)	77, 299, 515, 2276
PflMI	CCANNNNNTGG	3 cut(s)	281, 368, 1238
Ple19I	CGATCG	1 cut(s)	1509
PleI	GAGTC	2 cut(s)	554, 762
PmaCI	CACGTG	1 cut(s)	2199
PmlI	CACGTG	1 cut(s)	2199
PpsI	GAGTC	2 cut(s)	554, 762
Ppu21I	YACGTR	1 cut(s)	2199
PpuMI	RGGWCCY	2 cut(s)	745, 1563
PscI	ACATGT	1 cut(s)	654
PshAI	GACNNNNGTC	1 cut(s)	2199
PshBI	ATTAAT	1 cut(s)	552
PsiI	TTATAA	1 cut(s)	2294
Psp5II	RGGWCCY	2 cut(s)	745, 1563
Psp6I	CCWGG	2 cut(s)	361, 1718
PspCI	CACGTG	1 cut(s)	2199
PspFI	CCCAGC	2 cut(s)	313, 329
PspGI	CCWGG	2 cut(s)	361, 1718
PspPI	GGNCC	7 cut(s)	371, 381, 503, 745, 1563, 2214, 2304
PspPPI	RGGWCCY	2 cut(s)	745, 1563
PstI	CTGCAG	1 cut(s)	451
PstNI	CAGNNNCTG	2 cut(s)	458, 1304
PsuI	RGATCY	2 cut(s)	222, 2042
PvuI	CGATCG	1 cut(s)	1509
PvuII	CAGCTG	2 cut(s)	1530, 2318
RgaI	GCGATCGC	1 cut(s)	1509
RsaI	GTAC	6 cut(s)	476, 1189, 1373, 1451, 1868, 2165
RsaNI	GTAC	6 cut(s)	475, 1188, 1372, 1450, 1867, 2164
RseI	CAYNNNNRTG	2 cut(s)	1530, 2355
SaqAI	TTAA	1 cut(s)	552
Sau96I	GGNCC	7 cut(s)	371, 381, 503, 745, 1563, 2214, 2304
SchI	GAGTC	2 cut(s)	554, 763
ScrFI	CCNGG	2 cut(s)	363, 1720
SfaAI	GCGATCGC	1 cut(s)	1509
SfaNI	GCATC	6 cut(s)	141, 417, 719, 1747, 1777, 2104
SfcI	CTRYAG	1 cut(s)	447
SfuI	TTCGAA	1 cut(s)	255
SgfI	GCGATCGC	1 cut(s)	1509
SinI	GGWCC	5 cut(s)	503, 745, 1563, 2214, 2304
SmiMI	CAYNNNNRTG	2 cut(s)	1530, 2355
SmlI	CTYRAG	2 cut(s)	1163, 1711
SmoI	CTYRAG	2 cut(s)	1163, 1711
SpeI	ACTAGT	1 cut(s)	1925
SseBI	AGGCCT	1 cut(s)	1686
SspI	AATATT	1 cut(s)	2236
SspMI	CTAG	9 cut(s)	395, 912, 1221, 1236, 1460, 1607, 1830, 1926, 2339
StuI	AGGCCT	1 cut(s)	1686
StyD4I	CCNGG	2 cut(s)	361, 1718
StyI	CCWWGG	4 cut(s)	127, 694, 826, 1851
TaaI	ACNGT	2 cut(s)	1518, 2149
TaiI	ACGT	5 cut(s)	1050, 1089, 1957, 2201, 2328
TaqI	TCGA	7 cut(s)	156, 255, 1366, 1416, 1780, 2203, 2274
TatI	WGTACW	1 cut(s)	1187
TfiI	GAWTC	4 cut(s)	77, 299, 515, 2276
Tru1I	TTAA	1 cut(s)	552
Tru9I	TTAA	1 cut(s)	552
TscAI	CASTG	5 cut(s)	282, 310, 459, 1150, 2174
TseFI	GTSAC	5 cut(s)	62, 1476, 2321, 2328, 2348
Tsp45I	GTSAC	5 cut(s)	62, 1476, 2321, 2328, 2348
TspDTI	ATGAA	9 cut(s)	44, 605, 783, 825, 1257, 1263, 1628, 1810, 1899
TspGWI	ACGGA	2 cut(s)	492, 1281
TspRI	CASTG	5 cut(s)	282, 310, 459, 1150, 2174
Van91I	CCANNNNNTGG	3 cut(s)	281, 368, 1238
VpaK11BI	GGWCC	5 cut(s)	503, 745, 1563, 2214, 2304
VspI	ATTAAT	1 cut(s)	552
XagI	CCTNNNNNAGG	1 cut(s)	290
XapI	RAATTY	3 cut(s)	887, 979, 2023
XceI	RCATGY	1 cut(s)	658
XspI	CTAG	9 cut(s)	395, 912, 1221, 1236, 1460, 1607, 1830, 1926, 2339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.