BEL1-like homeodomain protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23760 AT2G23760 AT2G23760 AT2G23760 AT4G36870 AT4G36870 AT4G36870 AT4G36870 |
| fragaria_vesca | FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14721 |
| malus_domestica | MD02G1156800.v1.1 MD15G1271200.v1.1 |
| prunus_persica | Prupe.7G146900_v2.0.a1 Prupe.7G146900_v2.0.a1 |
| pyrus_communis | pycom02g12380 pycom02g12390 pycom15g23510 |
| rosa_chinensis | RchiOBHm_Chr2g0102991 |
| rosa_laevigata | RLG00000017198 |
| rosa_multiflora | Rmu_sc0000388.1_g000020 |
| rosa_roxburghii | Rroxscaffold_2G00140020 |
| rosa_rugosa | Rorug02G0111200 Rorug02G0111300 Rorug02G0111300 |
| rosa_samantha | Rh2AG159400 Rh2BG165900 Rh2CG166100 Rh2DG164800 |
| rosa_wichuraiana | Rw2G012450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2459 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1866 |
| AccB1I | GGYRCC | 4 cut(s) | 839, 1337, 1522, 1569 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 302 |
| AccII | CGCG | 3 cut(s) | 350, 552, 2270 |
| AccIII | TCCGGA | 2 cut(s) | 246, 323 |
| AclWI | GGATC | 4 cut(s) | 238, 952, 1153, 2151 |
| AcoI | YGGCCR | 2 cut(s) | 480, 2250 |
| AcsI | RAATTY | 3 cut(s) | 932, 1018, 2137 |
| AcyI | GRCGYC | 1 cut(s) | 2111 |
| AfaI | GTAC | 7 cut(s) | 18, 491, 1013, 1451, 1529, 1826, 1946 |
| AflIII | ACRYGT | 4 cut(s) | 699, 1120, 2345, 2490 |
| AgsI | TTSAA | 6 cut(s) | 373, 534, 594, 1394, 1600, 1678 |
| AjiI | CACGTC | 1 cut(s) | 2491 |
| AjnI | CCWGG | 2 cut(s) | 382, 1796 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 646, 678 |
| AleI | CACNNNNGTG | 2 cut(s) | 1461, 1608 |
| Alw21I | GWGCWC | 1 cut(s) | 1030 |
| Alw26I | GTCTC | 2 cut(s) | 1891, 2565 |
| AlwI | GGATC | 4 cut(s) | 238, 952, 1153, 2151 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1382, 1994, 2221 |
| Ama87I | CYCGRG | 2 cut(s) | 2389, 2540 |
| Aor13HI | TCCGGA | 2 cut(s) | 246, 323 |
| ApoI | RAATTY | 3 cut(s) | 932, 1018, 2137 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1764, 1796, 2122, 2154 |
| AseI | ATTAAT | 1 cut(s) | 600 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1490 |
| AspLEI | GCGC | 4 cut(s) | 238, 1543, 2270, 2278 |
| AspS9I | GGNCC | 7 cut(s) | 392, 1441, 1641, 1752, 1794, 2382, 2469 |
| AsuHPI | GGTGA | 8 cut(s) | 68, 134, 151, 857, 1495, 1513, 1811, 2498 |
| AsuII | TTCGAA | 1 cut(s) | 276 |
| AvaI | CYCGRG | 2 cut(s) | 2389, 2540 |
| AvaII | GGWCC | 4 cut(s) | 1441, 1641, 2382, 2469 |
| AxyI | CCTNAGG | 2 cut(s) | 1645, 1697 |
| BalI | TGGCCA | 1 cut(s) | 2252 |
| BanI | GGYRCC | 4 cut(s) | 839, 1337, 1522, 1569 |
| BanII | GRGCYC | 1 cut(s) | 1030 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 9, 41 |
| BbsI | GAAGAC | 1 cut(s) | 2436 |
| Bbv12I | GWGCWC | 1 cut(s) | 1030 |
| BbvCI | CCTCAGC | 2 cut(s) | 260, 927 |
| BceAI | ACGGC | 4 cut(s) | 1510, 1574, 1605, 2493 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2150, 2184 |
| BciT130I | CCWGG | 2 cut(s) | 384, 1798 |
| BclI | TGATCA | 2 cut(s) | 1996, 2416 |
| BcoDI | GTCTC | 2 cut(s) | 1891, 2565 |
| BfaI | CTAG | 6 cut(s) | 308, 1302, 1538, 1685, 1908, 2504 |
| BfmI | CTRYAG | 2 cut(s) | 1980, 2222 |
| BfoI | RGCGCY | 1 cut(s) | 2279 |
| Bme1390I | CCNGG | 2 cut(s) | 384, 1798 |
| Bme18I | GGWCC | 4 cut(s) | 1441, 1641, 2382, 2469 |
| BmeT110I | CYCGRG | 2 cut(s) | 2389, 2540 |
| BmgBI | CACGTC | 1 cut(s) | 2491 |
| BmgT120I | GGNCC | 7 cut(s) | 392, 1441, 1641, 1752, 1794, 2382, 2469 |
| BmrFI | CCNGG | 2 cut(s) | 384, 1798 |
| BmrI | ACTGGG | 1 cut(s) | 1628 |
| BmsI | GCATC | 9 cut(s) | 162, 430, 574, 592, 1570, 1671, 1825, 1855, 2294 |
| BmuI | ACTGGG | 1 cut(s) | 1628 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2346 |
| BpiI | GAAGAC | 1 cut(s) | 2436 |
| BpmI | CTGGAG | 4 cut(s) | 366, 437, 654, 780 |
| Bpu10I | CCTNAGC | 3 cut(s) | 260, 432, 927 |
| Bpu14I | TTCGAA | 1 cut(s) | 276 |
| BpuEI | CTTGAG | 3 cut(s) | 37, 1235, 1810 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1845, 2001 |
| BsaHI | GRCGYC | 1 cut(s) | 2111 |
| BsaI | GGTCTC | 1 cut(s) | 1891 |
| BsaWI | WCCGGW | 4 cut(s) | 246, 323, 334, 1566 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 455, 485, 846, 876, 1095, 1107, 1125, 1137 |
| Bse118I | RCCGGY | 3 cut(s) | 833, 842, 2483 |
| Bse1I | ACTGG | 3 cut(s) | 1279, 1623, 1870 |
| Bse21I | CCTNAGG | 2 cut(s) | 1645, 1697 |
| Bse3DI | GCAATG | 3 cut(s) | 899, 1082, 2297 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1845, 2001 |
| BseAI | TCCGGA | 2 cut(s) | 246, 323 |
| BseBI | CCWGG | 2 cut(s) | 384, 1798 |
| BseGI | GGATG | 7 cut(s) | 421, 450, 719, 945, 1366, 1585, 2306 |
| BseJI | GATNNNNATC | 2 cut(s) | 1845, 2001 |
| BseMI | GCAATG | 3 cut(s) | 899, 1082, 2297 |
| BseMII | CTCAG | 6 cut(s) | 251, 446, 624, 789, 918, 1659 |
| BseNI | ACTGG | 3 cut(s) | 1279, 1623, 1870 |
| BseRI | GAGGAG | 3 cut(s) | 657, 777, 780 |
| BseX3I | CGGCCG | 1 cut(s) | 480 |
| BseYI | CCCAGC | 1 cut(s) | 398 |
| Bsh1236I | CGCG | 3 cut(s) | 350, 552, 2270 |
| Bsh1285I | CGRYCG | 1 cut(s) | 483 |
| BshNI | GGYRCC | 4 cut(s) | 839, 1337, 1522, 1569 |
| BsiEI | CGRYCG | 1 cut(s) | 483 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1030 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2389, 2540 |
| BsiSI | CCGG | 7 cut(s) | 247, 324, 335, 834, 843, 1567, 2484 |
| BslFI | GGGAC | 5 cut(s) | 115, 1285, 1654, 2395, 2482 |
| BsmAI | GTCTC | 2 cut(s) | 1891, 2565 |
| BsmFI | GGGAC | 5 cut(s) | 115, 1285, 1654, 2395, 2482 |
| BsmI | GAATGC | 1 cut(s) | 1490 |
| Bso31I | GGTCTC | 1 cut(s) | 1891 |
| BsoBI | CYCGRG | 2 cut(s) | 2389, 2540 |
| Bsp119I | TTCGAA | 1 cut(s) | 276 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1030 |
| Bsp13I | TCCGGA | 2 cut(s) | 246, 323 |
| Bsp19I | CCATGG | 1 cut(s) | 1929 |
| BspCNI | CTCAG | 6 cut(s) | 252, 445, 623, 790, 919, 1658 |
| BspEI | TCCGGA | 2 cut(s) | 246, 323 |
| BspFNI | CGCG | 3 cut(s) | 350, 552, 2270 |
| BspHI | TCATGA | 1 cut(s) | 2413 |
| BspMAI | CTGCAG | 2 cut(s) | 1984, 2226 |
| BspPI | GGATC | 4 cut(s) | 238, 952, 1153, 2151 |
| BspT104I | TTCGAA | 1 cut(s) | 276 |
| BspT107I | GGYRCC | 4 cut(s) | 839, 1337, 1522, 1569 |
| BspTNI | GGTCTC | 1 cut(s) | 1891 |
| BsrDI | GCAATG | 3 cut(s) | 899, 1082, 2297 |
| BsrFI | RCCGGY | 3 cut(s) | 833, 842, 2483 |
| BsrI | ACTGG | 3 cut(s) | 1279, 1623, 1870 |
| BssAI | RCCGGY | 3 cut(s) | 833, 842, 2483 |
| BssNI | GRCGYC | 1 cut(s) | 2111 |
| BssT1I | CCWWGG | 5 cut(s) | 148, 739, 871, 1670, 1929 |
| Bst2UI | CCWGG | 2 cut(s) | 384, 1798 |
| Bst4CI | ACNGT | 7 cut(s) | 16, 557, 1091, 1215, 1445, 1463, 1596 |
| Bst6I | CTCTTC | 3 cut(s) | 1215, 1348, 1932 |
| BstACI | GRCGYC | 1 cut(s) | 2111 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 1084, 1093, 2221, 2233, 2405 |
| BstBI | TTCGAA | 1 cut(s) | 276 |
| BstC8I | GCNNGC | 7 cut(s) | 352, 1061, 1080, 1318, 1766, 2266, 2331 |
| BstDEI | CTNAG | 7 cut(s) | 260, 432, 610, 798, 927, 1645, 1697 |
| BstDSI | CCRYGG | 3 cut(s) | 348, 1929, 2475 |
| BstF5I | GGATG | 7 cut(s) | 421, 450, 719, 945, 1366, 1585, 2306 |
| BstFNI | CGCG | 3 cut(s) | 350, 552, 2270 |
| BstH2I | RGCGCY | 1 cut(s) | 2279 |
| BstHHI | GCGC | 4 cut(s) | 238, 1543, 2270, 2278 |
| BstMAI | GTCTC | 2 cut(s) | 1891, 2565 |
| BstMCI | CGRYCG | 1 cut(s) | 483 |
| BstNI | CCWGG | 2 cut(s) | 384, 1798 |
| BstNSI | RCATGY | 4 cut(s) | 358, 703, 1124, 2349 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2346 |
| BstSCI | CCNGG | 2 cut(s) | 382, 1796 |
| BstSFI | CTRYAG | 2 cut(s) | 1980, 2222 |
| BstUI | CGCG | 3 cut(s) | 350, 552, 2270 |
| BstV2I | GAAGAC | 1 cut(s) | 2436 |
| BstX2I | RGATCY | 2 cut(s) | 243, 2156 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2522 |
| BstYI | RGATCY | 2 cut(s) | 243, 2156 |
| BstZI | CGGCCG | 1 cut(s) | 480 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1645, 1697 |
| BtgI | CCRYGG | 3 cut(s) | 348, 1929, 2475 |
| BtgZI | GCGATG | 2 cut(s) | 1848, 2271 |
| BtrI | CACGTC | 1 cut(s) | 2491 |
| BtsCI | GGATG | 7 cut(s) | 421, 450, 719, 945, 1366, 1585, 2306 |
| BtsI | GCAGTG | 3 cut(s) | 1237, 1327, 2259 |
| BtsIMutI | CAGTG | 3 cut(s) | 1237, 1327, 2259 |
| Cac8I | GCNNGC | 7 cut(s) | 352, 1061, 1080, 1318, 1766, 2266, 2331 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1382, 1994, 2221 |
| CciI | TCATGA | 1 cut(s) | 2413 |
| CfoI | GCGC | 4 cut(s) | 238, 1543, 2270, 2278 |
| Cfr10I | RCCGGY | 3 cut(s) | 833, 842, 2483 |
| Cfr13I | GGNCC | 7 cut(s) | 392, 1441, 1641, 1752, 1794, 2382, 2469 |
| Cfr42I | CCGCGG | 1 cut(s) | 351 |
| CseI | GACGC | 1 cut(s) | 2119 |
| Csp6I | GTAC | 7 cut(s) | 17, 490, 1012, 1450, 1528, 1825, 1945 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1249, 1284, 2253, 2288 |
| CviQI | GTAC | 7 cut(s) | 17, 490, 1012, 1450, 1528, 1825, 1945 |
| DdeI | CTNAG | 7 cut(s) | 260, 432, 610, 798, 927, 1645, 1697 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1866 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1866 |
| EaeI | YGGCCR | 2 cut(s) | 480, 2250 |
| EagI | CGGCCG | 1 cut(s) | 480 |
| Eam1104I | CTCTTC | 3 cut(s) | 1215, 1348, 1932 |
| EarI | CTCTTC | 3 cut(s) | 1215, 1348, 1932 |
| Ecl136II | GAGCTC | 1 cut(s) | 1028 |
| EclXI | CGGCCG | 1 cut(s) | 480 |
| Eco130I | CCWWGG | 5 cut(s) | 148, 739, 871, 1670, 1929 |
| Eco147I | AGGCCT | 3 cut(s) | 330, 437, 876 |
| Eco24I | GRGCYC | 1 cut(s) | 1030 |
| Eco31I | GGTCTC | 1 cut(s) | 1891 |
| Eco47I | GGWCC | 4 cut(s) | 1441, 1641, 2382, 2469 |
| Eco52I | CGGCCG | 1 cut(s) | 480 |
| Eco53kI | GAGCTC | 1 cut(s) | 1028 |
| Eco81I | CCTNAGG | 2 cut(s) | 1645, 1697 |
| Eco88I | CYCGRG | 2 cut(s) | 2389, 2540 |
| EcoICRI | GAGCTC | 1 cut(s) | 1028 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1641, 1752, 1794 |
| EcoRI | GAATTC | 1 cut(s) | 932 |
| EcoRII | CCWGG | 2 cut(s) | 382, 1796 |
| EcoT14I | CCWWGG | 5 cut(s) | 148, 739, 871, 1670, 1929 |
| EcoT38I | GRGCYC | 1 cut(s) | 1030 |
| ErhI | CCWWGG | 5 cut(s) | 148, 739, 871, 1670, 1929 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 646, 678 |
| FaqI | GGGAC | 5 cut(s) | 115, 1285, 1654, 2395, 2482 |
| FauI | CCCGC | 4 cut(s) | 291, 343, 953, 1630 |
| FbaI | TGATCA | 2 cut(s) | 1996, 2416 |
| FokI | GGATG | 7 cut(s) | 408, 457, 706, 952, 1373, 1592, 2293 |
| FriOI | GRGCYC | 1 cut(s) | 1030 |
| FspBI | CTAG | 6 cut(s) | 308, 1302, 1538, 1685, 1908, 2504 |
| GlaI | GCGC | 4 cut(s) | 237, 1542, 2269, 2277 |
| GsaI | CCCAGC | 1 cut(s) | 402 |
| GsuI | CTGGAG | 4 cut(s) | 366, 437, 654, 780 |
| HaeII | RGCGCY | 1 cut(s) | 2279 |
| HapII | CCGG | 7 cut(s) | 247, 324, 335, 834, 843, 1567, 2484 |
| HgaI | GACGC | 1 cut(s) | 2119 |
| HhaI | GCGC | 4 cut(s) | 238, 1543, 2270, 2278 |
| Hin1I | GRCGYC | 1 cut(s) | 2111 |
| Hin6I | GCGC | 4 cut(s) | 236, 1541, 2268, 2276 |
| HinP1I | GCGC | 4 cut(s) | 236, 1541, 2268, 2276 |
| HincII | GTYRAC | 1 cut(s) | 1783 |
| HindII | GTYRAC | 1 cut(s) | 1783 |
| HindIII | AAGCTT | 2 cut(s) | 1743, 2461 |
| HinfI | GANTC | 6 cut(s) | 95, 320, 530, 608, 802, 2548 |
| HpaII | CCGG | 7 cut(s) | 247, 324, 335, 834, 843, 1567, 2484 |
| HphI | GGTGA | 8 cut(s) | 68, 134, 151, 857, 1495, 1513, 1811, 2498 |
| Hpy166II | GTNNAC | 4 cut(s) | 1441, 1486, 1530, 1783 |
| Hpy8I | GTNNAC | 4 cut(s) | 1441, 1486, 1530, 1783 |
| Hpy99I | CGWCG | 1 cut(s) | 2113 |
| HpyCH4III | ACNGT | 7 cut(s) | 16, 557, 1091, 1215, 1445, 1463, 1596 |
| HpyCH4IV | ACGT | 2 cut(s) | 2023, 2490 |
| HpyF3I | CTNAG | 7 cut(s) | 260, 432, 610, 798, 927, 1645, 1697 |
| HpySE526I | ACGT | 2 cut(s) | 2023, 2490 |
| Hsp92I | GRCGYC | 1 cut(s) | 2111 |
| HspAI | GCGC | 4 cut(s) | 236, 1541, 2268, 2276 |
| Kpn2I | TCCGGA | 2 cut(s) | 246, 323 |
| Ksp22I | TGATCA | 2 cut(s) | 1996, 2416 |
| KspI | CCGCGG | 1 cut(s) | 351 |
| LmnI | GCTCC | 4 cut(s) | 418, 463, 518, 1025 |
| LweI | GCATC | 9 cut(s) | 162, 430, 574, 592, 1570, 1671, 1825, 1855, 2294 |
| MaeI | CTAG | 6 cut(s) | 308, 1302, 1538, 1685, 1908, 2504 |
| MaeII | ACGT | 2 cut(s) | 2023, 2490 |
| MaeIII | GTNAC | 6 cut(s) | 104, 963, 1554, 2024, 2486, 2493 |
| MflI | RGATCY | 2 cut(s) | 243, 2156 |
| MhlI | GDGCHC | 1 cut(s) | 1030 |
| MlsI | TGGCCA | 1 cut(s) | 2252 |
| MluNI | TGGCCA | 1 cut(s) | 2252 |
| MlyI | GAGTC | 2 cut(s) | 602, 811 |
| MmeI | TCCRAC | 3 cut(s) | 56, 1197, 2093 |
| Mox20I | TGGCCA | 1 cut(s) | 2252 |
| MroI | TCCGGA | 2 cut(s) | 246, 323 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1490 |
| MscI | TGGCCA | 1 cut(s) | 2252 |
| MseI | TTAA | 2 cut(s) | 600, 2587 |
| MslI | CAYNNNNRTG | 5 cut(s) | 813, 1461, 1608, 2290, 2520 |
| Msp20I | TGGCCA | 1 cut(s) | 2252 |
| MspA1I | CMGCKG | 9 cut(s) | 350, 614, 1316, 1382, 1608, 1994, 2087, 2221, 2372 |
| MspI | CCGG | 7 cut(s) | 247, 324, 335, 834, 843, 1567, 2484 |
| MspR9I | CCNGG | 2 cut(s) | 384, 1798 |
| Mva1269I | GAATGC | 1 cut(s) | 1490 |
| MvaI | CCWGG | 2 cut(s) | 384, 1798 |
| MvnI | CGCG | 3 cut(s) | 350, 552, 2270 |
| NcoI | CCATGG | 1 cut(s) | 1929 |
| NmeAIII | GCCGAG | 3 cut(s) | 430, 508, 2378 |
| NmuCI | GTSAC | 3 cut(s) | 1554, 2486, 2493 |
| NspI | RCATGY | 4 cut(s) | 358, 703, 1124, 2349 |
| NspV | TTCGAA | 1 cut(s) | 276 |
| OliI | CACNNNNGTG | 2 cut(s) | 1461, 1608 |
| PagI | TCATGA | 1 cut(s) | 2413 |
| PceI | AGGCCT | 3 cut(s) | 330, 437, 876 |
| PciI | ACATGT | 3 cut(s) | 699, 1120, 2345 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2078 |
| PctI | GAATGC | 1 cut(s) | 1490 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1490 |
| PfeI | GAWTC | 4 cut(s) | 95, 320, 530, 2548 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 302 |
| PleI | GAGTC | 2 cut(s) | 602, 810 |
| PpsI | GAGTC | 2 cut(s) | 602, 810 |
| PpuMI | RGGWCCY | 1 cut(s) | 1641 |
| PscI | ACATGT | 3 cut(s) | 699, 1120, 2345 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2346 |
| PshBI | ATTAAT | 1 cut(s) | 600 |
| PsiI | TTATAA | 1 cut(s) | 2459 |
| Psp124BI | GAGCTC | 1 cut(s) | 1030 |
| Psp5II | RGGWCCY | 1 cut(s) | 1641 |
| Psp6I | CCWGG | 2 cut(s) | 382, 1796 |
| PspFI | CCCAGC | 1 cut(s) | 398 |
| PspGI | CCWGG | 2 cut(s) | 382, 1796 |
| PspPI | GGNCC | 7 cut(s) | 392, 1441, 1641, 1752, 1794, 2382, 2469 |
| PspPPI | RGGWCCY | 1 cut(s) | 1641 |
| PstI | CTGCAG | 2 cut(s) | 1984, 2226 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1382, 1994, 2221 |
| PsuI | RGATCY | 2 cut(s) | 243, 2156 |
| PvuII | CAGCTG | 5 cut(s) | 1316, 1608, 1994, 2087, 2221 |
| RsaI | GTAC | 7 cut(s) | 18, 491, 1013, 1451, 1529, 1826, 1946 |
| RsaNI | GTAC | 7 cut(s) | 17, 490, 1012, 1450, 1528, 1825, 1945 |
| RseI | CAYNNNNRTG | 5 cut(s) | 813, 1461, 1608, 2290, 2520 |
| SacI | GAGCTC | 1 cut(s) | 1030 |
| SacII | CCGCGG | 1 cut(s) | 351 |
| SaqAI | TTAA | 2 cut(s) | 600, 2587 |
| Sau96I | GGNCC | 7 cut(s) | 392, 1441, 1641, 1752, 1794, 2382, 2469 |
| SchI | GAGTC | 2 cut(s) | 602, 811 |
| ScrFI | CCNGG | 2 cut(s) | 384, 1798 |
| SduI | GDGCHC | 1 cut(s) | 1030 |
| SfaNI | GCATC | 9 cut(s) | 162, 430, 574, 592, 1570, 1671, 1825, 1855, 2294 |
| SfcI | CTRYAG | 2 cut(s) | 1980, 2222 |
| Sfr303I | CCGCGG | 1 cut(s) | 351 |
| SfuI | TTCGAA | 1 cut(s) | 276 |
| SgrAI | CRCCGGYG | 1 cut(s) | 833 |
| SgrBI | CCGCGG | 1 cut(s) | 351 |
| SinI | GGWCC | 4 cut(s) | 1441, 1641, 2382, 2469 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 813, 1461, 1608, 2290, 2520 |
| SmlI | CTYRAG | 3 cut(s) | 52, 1250, 1789 |
| SmoI | CTYRAG | 3 cut(s) | 52, 1250, 1789 |
| SseBI | AGGCCT | 3 cut(s) | 330, 437, 876 |
| SspI | AATATT | 1 cut(s) | 2437 |
| SspMI | CTAG | 6 cut(s) | 308, 1302, 1538, 1685, 1908, 2504 |
| SstI | GAGCTC | 1 cut(s) | 1030 |
| StuI | AGGCCT | 3 cut(s) | 330, 437, 876 |
| StyD4I | CCNGG | 2 cut(s) | 382, 1796 |
| StyI | CCWWGG | 5 cut(s) | 148, 739, 871, 1670, 1929 |
| TaaI | ACNGT | 7 cut(s) | 16, 557, 1091, 1215, 1445, 1463, 1596 |
| TaiI | ACGT | 2 cut(s) | 2026, 2493 |
| TaqI | TCGA | 5 cut(s) | 177, 276, 1494, 1874, 1915 |
| TatI | WGTACW | 1 cut(s) | 1011 |
| TauI | GCSGC | 6 cut(s) | 393, 482, 552, 617, 1382, 1520 |
| TfiI | GAWTC | 4 cut(s) | 95, 320, 530, 2548 |
| Tru1I | TTAA | 2 cut(s) | 600, 2587 |
| Tru9I | TTAA | 2 cut(s) | 600, 2587 |
| TscAI | CASTG | 3 cut(s) | 1237, 1327, 2266 |
| TseFI | GTSAC | 3 cut(s) | 1554, 2486, 2493 |
| Tsp45I | GTSAC | 3 cut(s) | 1554, 2486, 2493 |
| TspDTI | ATGAA | 9 cut(s) | 357, 653, 870, 888, 1335, 1341, 1706, 1888, 1977 |
| TspGWI | ACGGA | 1 cut(s) | 507 |
| TspRI | CASTG | 3 cut(s) | 1237, 1327, 2266 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 302 |
| VpaK11BI | GGWCC | 4 cut(s) | 1441, 1641, 2382, 2469 |
| VspI | ATTAAT | 1 cut(s) | 600 |
| XapI | RAATTY | 3 cut(s) | 932, 1018, 2137 |
| XceI | RCATGY | 4 cut(s) | 358, 703, 1124, 2349 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2045, 2522 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1490 |
| XspI | CTAG | 6 cut(s) | 308, 1302, 1538, 1685, 1908, 2504 |