Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000388.1

Orthogroup ID

OG0003386

Physical Location & Seq

Genomic Coordinates Reverse (-)

123755 .. 129299

Gene Structure 5545 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000388.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

atgtcccaagactaccatcaaagcatctacagcttccccaatggcttcgaaagatcggcgatgaccacccaccaagagcagcagcagcaacagcagcagcaacaccacttagcacagcagatccggagggaaaagctgagggtgcaagggttcgagccacctcctccgccattggtcgggttagacgaggaagaatccaatccggtgtatgaaacagctgggatgttgtcggagatgtttaattatcctgcaggagtcgcaccacctgcagaactgcttgaacatccgatggctgccggctatcggatggctcggccgcagcagcatcaatctgctgcggccgagtggtatggaagcagacaaaacatggtgggcggattgggtccattgggggattcaaataagaatcagagtggccgcgacaacttagcagttcatcagcatcagatttcgaccattaatgcggattcagctgctgccatgcagctttttctaatgaatccacaaccaagatcgccttctcctccagctcactcaacttcttctactcttcacatgttgctccctaatccttcatccactacttttcctggggcaggaggcggaggaggaggggcttttggtcagttctcatgggtgagtccagatactcatggccatgaaggcggttccacaactggtcctgcccaccaactcaacaccagcaacattaaccctagtgatcaccaccagcaaggtctttcattatctttatccacttcattgcaacacttagaggcagccaaagccgaagaactacgaatgggagatggttccggattgttgtactacaacaatccggaagggtcttccagcactgcacattacagccagtacaagaatcttgttggtcatcaaagccagcaggttcacgtcgggttcgggtcgtcatctttcggggttgtgaatgtcttgaggaattcaaagtatgtcaaggccgcccaagaattgttggaagagttttgcagtgttggtaggggtcaattgaagaagaacaaattgggtcgacagaatagctcattaaaccctagctccaatccagctggcaccagcggcggtggtgctggcggtggcgcctcttcatcttcatcaaaggatgcgcctcctactttgtcagccgctgataggatcgaacatcagagaaggaaggtcaaactgttgtccatgcttgatgaggtggatcgaagatacaaccactactgcgagcaaatgcaaatggtggttaacgcatttgatctggtgatgggtttcggggccgcggtgccgtacacagccctagctcagaaggcaatgtcacggcatttccggtgcctgaaagacgcggtaacagcgcagttgaagcacagctgtgaattgctcggagagaaagatggtgcggggaactcaggtataaccaaaggagagacgccgaggctaaagatgctagagcaaagcctgagacagcaaagagcatttcatcagatgggcatgatggaacaagaagcttggagaccccaaagaggccttcccgaacgatctgtcaacatcttgagagcctggctttttgagcattttctccacccgtacccaagcgatgcagataagcatctgttggcacgacagactggtctctccagaaaccaggtctcaaactggttcatcaatgctagggttcgattgtggaaacccatggtggaagagatgtaccagcaagaagccaatgaagaaggtggtggtgcagctgcagcagcagcagtatcagtagatcaagatcagagatcagaacaacgcaacaaccaaaacaacaacattagtgaccaccacgcacagactccaacgcctcccacaacaacaacaacgacaactgccatgtcagccacaacgacaacaacagtagctacaagatccgatatcaatgcctccgaaagtgacccttcactcctcgcattcaataggcaacgatccttctcggaaaaccaatccactactcctacttaccccatcaacatgtccaccagtaccaccgccacccctctggtggcgccgcctgtgccctaccccaccaccgccgacgacacgtgtcgccgcggcagcatggactacgggaccacctcgggcaacgcatcatcatcagcagttgcaggagatcatcaaagtcttcatcatcatgcagggtctacgcttataacgttcgggaccaccacggcgggtgatgtgtctctcactctcgggctccgccatgccggaggagcaaacattcccgagaagaacacttcttccttctccattagagactttgggggctgttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009889 GO:0009965 GO:0010016 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

775

Amino Acids

83.87

Weight (kDa)

6.57

Isoelectric Point (pI)

54.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003386)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23760 AT2G23760 AT2G23760 AT2G23760 AT4G36870 AT4G36870 AT4G36870 AT4G36870
fragaria_vesca	FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14320 FvH4_1g14721
malus_domestica	MD02G1156800.v1.1 MD15G1271200.v1.1
prunus_persica	Prupe.7G146900_v2.0.a1 Prupe.7G146900_v2.0.a1
pyrus_communis	pycom02g12380 pycom02g12390 pycom15g23510
rosa_chinensis	RchiOBHm_Chr2g0102991
rosa_laevigata	RLG00000017198
rosa_multiflora	Rmu_sc0000388.1_g000020
rosa_roxburghii	Rroxscaffold_2G00140020
rosa_rugosa	Rorug02G0111200 Rorug02G0111300 Rorug02G0111300
rosa_samantha	Rh2AG159400 Rh2BG165900 Rh2CG166100 Rh2DG164800
rosa_wichuraiana	Rw2G012450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2204
AarI	CACCTGC	1 cut(s)	274
AasI	GACNNNNNNGTC	1 cut(s)	1644
Acc36I	ACCTGC	2 cut(s)	274, 895
AccB1I	GGYRCC	5 cut(s)	1085, 1112, 1300, 1347, 2059
AccI	GTMKAC	2 cut(s)	1045, 2195
AccII	CGCG	4 cut(s)	420, 1298, 1361, 2106
AccIII	TCCGGA	3 cut(s)	123, 815, 838
AclI	AACGTT	1 cut(s)	2207
AclWI	GGATC	5 cut(s)	115, 1175, 1227, 1917, 1974
AcoI	YGGCCR	4 cut(s)	314, 339, 415, 655
AcsI	RAATTY	1 cut(s)	958
AcvI	CACGTG	1 cut(s)	2097
AcyI	GRCGYC	3 cut(s)	1113, 1445, 2060
AfaI	GTAC	6 cut(s)	827, 875, 1307, 1604, 1724, 2038
AfiI	CCNNNNNNNGG	6 cut(s)	176, 303, 596, 1164, 1538, 2056
AflIII	ACRYGT	4 cut(s)	555, 2025, 2094, 2096
AgsI	TTSAA	6 cut(s)	281, 399, 963, 1027, 1378, 1969
AjiI	CACGTC	1 cut(s)	913
AjnI	CCWGG	3 cut(s)	589, 1574, 1659
AjuI	GAANNNNNNNTTGG	6 cut(s)	502, 534, 1022, 1054, 1527, 1559
AleI	CACNNNNGTG	1 cut(s)	1386
AloI	GAACNNNNNNTCC	2 cut(s)	2279, 2311
Alw26I	GTCTC	7 cut(s)	1436, 1471, 1522, 1652, 1669, 2241, 2304
AlwI	GGATC	5 cut(s)	115, 1175, 1227, 1917, 1974
AlwNI	CAGNNNCTG	2 cut(s)	476, 1160
Ama87I	CYCGRG	3 cut(s)	2131, 2246, 2279
Aor13HI	TCCGGA	3 cut(s)	123, 815, 838
AoxI	GGCC	7 cut(s)	314, 339, 415, 655, 975, 1293, 1540
ApoI	RAATTY	1 cut(s)	958
ArsI	GACNNNNNNTTYG	2 cut(s)	1542, 1574
AseI	ATTAAT	1 cut(s)	459
AspLEI	GCGC	4 cut(s)	1115, 1141, 1372, 2062
AspS9I	GGNCC	5 cut(s)	383, 680, 1293, 2124, 2214
AsuHPI	GGTGA	4 cut(s)	649, 716, 1291, 2240
AsuII	TTCGAA	1 cut(s)	48
AvaI	CYCGRG	3 cut(s)	2131, 2246, 2279
AvaII	GGWCC	4 cut(s)	383, 680, 2124, 2214
BaeGI	GKGCMC	1 cut(s)	2073
BalI	TGGCCA	1 cut(s)	657
BanI	GGYRCC	5 cut(s)	1085, 1112, 1300, 1347, 2059
BanII	GRGCYC	1 cut(s)	2253
BbrPI	CACGTG	1 cut(s)	2097
BbsI	GAAGAC	2 cut(s)	840, 2168
BbvCI	CCTCAGC	1 cut(s)	137
BccI	CCATC	9 cut(s)	24, 283, 301, 803, 1276, 1403, 1495, 1504, 2027
BceAI	ACGGC	3 cut(s)	1288, 1352, 2238
BcgI	CGANNNNNNTGC	2 cut(s)	1916, 1950
BciT130I	CCWGG	3 cut(s)	591, 1576, 1661
BclI	TGATCA	1 cut(s)	721
BcoDI	GTCTC	7 cut(s)	1436, 1471, 1522, 1652, 1669, 2241, 2304
BfaI	CTAG	5 cut(s)	717, 1068, 1316, 1463, 1686
BfmI	CTRYAG	4 cut(s)	28, 249, 267, 1761
BfoI	RGCGCY	2 cut(s)	1116, 2063
BfuAI	ACCTGC	2 cut(s)	274, 895
BglI	GCCNNNNNGGC	1 cut(s)	663
Bme1390I	CCNGG	3 cut(s)	591, 1576, 1661
Bme18I	GGWCC	4 cut(s)	383, 680, 2124, 2214
BmeT110I	CYCGRG	3 cut(s)	2131, 2246, 2279
BmgBI	CACGTC	1 cut(s)	913
BmgT120I	GGNCC	5 cut(s)	383, 680, 1293, 2124, 2214
BmrFI	CCNGG	3 cut(s)	591, 1576, 1661
BmsI	GCATC	8 cut(s)	33, 334, 451, 1126, 1449, 1603, 1633, 2150
BoxI	GACNNNNGTC	1 cut(s)	2097
BpiI	GAAGAC	2 cut(s)	840, 2168
BpmI	CTGGAG	2 cut(s)	510, 1636
Bpu10I	CCTNAGC	1 cut(s)	137
Bpu14I	TTCGAA	1 cut(s)	48
BpuEI	CTTGAG	2 cut(s)	973, 1588
BsaAI	YACGTR	1 cut(s)	2097
BsaBI	GATNNNNATC	2 cut(s)	1623, 1788
BsaHI	GRCGYC	3 cut(s)	1113, 1445, 2060
BsaI	GGTCTC	3 cut(s)	1522, 1652, 1669
BsaJI	CCNNGG	7 cut(s)	590, 1296, 1448, 1707, 2104, 2130, 2220
BsaWI	WCCGGW	5 cut(s)	123, 202, 815, 838, 1344
BsaXI	ACNNNNNCTCC	2 cut(s)	1055, 1085
Bsc4I	CCNNNNNNNGG	6 cut(s)	176, 303, 596, 1164, 1538, 2056
Bse118I	RCCGGY	1 cut(s)	296
Bse1I	ACTGG	5 cut(s)	682, 871, 1648, 1676, 2034
Bse3DI	GCAATG	2 cut(s)	761, 1335
Bse8I	GATNNNNATC	2 cut(s)	1623, 1788
BseAI	TCCGGA	3 cut(s)	123, 815, 838
BseBI	CCWGG	3 cut(s)	591, 1576, 1661
BseDI	CCNNGG	7 cut(s)	590, 1296, 1448, 1707, 2104, 2130, 2220
BseGI	GGATG	5 cut(s)	228, 283, 312, 575, 1141
BseJI	GATNNNNATC	2 cut(s)	1623, 1788
BseLI	CCNNNNNNNGG	6 cut(s)	176, 303, 596, 1164, 1538, 2056
BseMI	GCAATG	2 cut(s)	761, 1335
BseMII	CTCAG	4 cut(s)	128, 1334, 1437, 1466
BseNI	ACTGG	5 cut(s)	682, 871, 1648, 1676, 2034
BseRI	GAGGAG	6 cut(s)	153, 513, 621, 624, 1949, 2280
BseSI	GKGCMC	1 cut(s)	2073
BseX3I	CGGCCG	2 cut(s)	314, 339
BseYI	CCCAGC	1 cut(s)	218
BsgI	GTGCAG	2 cut(s)	843, 1776
Bsh1236I	CGCG	4 cut(s)	420, 1298, 1361, 2106
Bsh1285I	CGRYCG	2 cut(s)	317, 342
BshFI	GGCC	7 cut(s)	316, 341, 417, 657, 977, 1295, 1542
BshNI	GGYRCC	5 cut(s)	1085, 1112, 1300, 1347, 2059
BsiEI	CGRYCG	2 cut(s)	317, 342
BsiHKCI	CYCGRG	3 cut(s)	2131, 2246, 2279
BsiSI	CCGG	7 cut(s)	124, 203, 297, 816, 839, 1345, 2262
BslFI	GGGAC	2 cut(s)	2137, 2227
BslI	CCNNNNNNNGG	6 cut(s)	176, 303, 596, 1164, 1538, 2056
BsmAI	GTCTC	7 cut(s)	1436, 1471, 1522, 1652, 1669, 2241, 2304
BsmBI	CGTCTC	1 cut(s)	1436
BsmFI	GGGAC	2 cut(s)	2137, 2227
BsmI	GAATGC	1 cut(s)	1964
BsnI	GGCC	7 cut(s)	316, 341, 417, 657, 977, 1295, 1542
Bso31I	GGTCTC	3 cut(s)	1522, 1652, 1669
BsoBI	CYCGRG	3 cut(s)	2131, 2246, 2279
Bsp119I	TTCGAA	1 cut(s)	48
Bsp1286I	GDGCHC	2 cut(s)	2073, 2253
Bsp13I	TCCGGA	3 cut(s)	123, 815, 838
Bsp19I	CCATGG	1 cut(s)	1707
BspANI	GGCC	7 cut(s)	316, 341, 417, 657, 977, 1295, 1542
BspCNI	CTCAG	4 cut(s)	129, 1333, 1436, 1467
BspEI	TCCGGA	3 cut(s)	123, 815, 838
BspFNI	CGCG	4 cut(s)	420, 1298, 1361, 2106
BspMAI	CTGCAG	3 cut(s)	253, 271, 1765
BspMI	ACCTGC	2 cut(s)	274, 895
BspPI	GGATC	5 cut(s)	115, 1175, 1227, 1917, 1974
BspT104I	TTCGAA	1 cut(s)	48
BspT107I	GGYRCC	5 cut(s)	1085, 1112, 1300, 1347, 2059
BspTNI	GGTCTC	3 cut(s)	1522, 1652, 1669
BsrDI	GCAATG	2 cut(s)	761, 1335
BsrFI	RCCGGY	1 cut(s)	296
BsrI	ACTGG	5 cut(s)	682, 871, 1648, 1676, 2034
BssAI	RCCGGY	1 cut(s)	296
BssECI	CCNNGG	7 cut(s)	590, 1296, 1448, 1707, 2104, 2130, 2220
BssNI	GRCGYC	3 cut(s)	1113, 1445, 2060
BssT1I	CCWWGG	1 cut(s)	1707
Bst2UI	CCWGG	3 cut(s)	591, 1576, 1661
Bst4CI	ACNGT	2 cut(s)	1197, 1912
Bst6I	CTCTTC	4 cut(s)	555, 990, 1123, 1710
BstACI	GRCGYC	3 cut(s)	1113, 1445, 2060
BstAPI	GCANNNNNTGC	1 cut(s)	266
BstBAI	YACGTR	1 cut(s)	2097
BstBI	TTCGAA	1 cut(s)	48
BstC8I	GCNNGC	5 cut(s)	298, 902, 1084, 1105, 1244
BstDEI	CTNAG	7 cut(s)	109, 137, 427, 772, 1320, 1423, 1475
BstDSI	CCRYGG	4 cut(s)	1296, 1707, 2104, 2220
BstENI	CCTNNNNNAGG	1 cut(s)	594
BstF5I	GGATG	5 cut(s)	228, 283, 312, 575, 1141
BstFNI	CGCG	4 cut(s)	420, 1298, 1361, 2106
BstH2I	RGCGCY	2 cut(s)	1116, 2063
BstHHI	GCGC	4 cut(s)	1115, 1141, 1372, 2062
BstMAI	GTCTC	7 cut(s)	1436, 1471, 1522, 1652, 1669, 2241, 2304
BstMCI	CGRYCG	2 cut(s)	317, 342
BstNI	CCWGG	3 cut(s)	591, 1576, 1661
BstNSI	RCATGY	2 cut(s)	559, 2029
BstPAI	GACNNNNGTC	1 cut(s)	2097
BstSCI	CCNGG	3 cut(s)	589, 1574, 1659
BstSFI	CTRYAG	4 cut(s)	28, 249, 267, 1761
BstSLI	GKGCMC	1 cut(s)	2073
BstUI	CGCG	4 cut(s)	420, 1298, 1361, 2106
BstV2I	GAAGAC	2 cut(s)	840, 2168
BstX2I	RGATCY	2 cut(s)	120, 1922
BstXI	CCANNNNNNTGG	1 cut(s)	2053
BstYI	RGATCY	2 cut(s)	120, 1922
BstZI	CGGCCG	2 cut(s)	314, 339
BsuRI	GGCC	7 cut(s)	316, 341, 417, 657, 977, 1295, 1542
BtgI	CCRYGG	4 cut(s)	1296, 1707, 2104, 2220
BtgZI	GCGATG	2 cut(s)	74, 1626
BtrI	CACGTC	1 cut(s)	913
BtsCI	GGATG	5 cut(s)	228, 283, 312, 575, 1141
BtsI	GCAGTG	2 cut(s)	855, 1012
BtsIMutI	CAGTG	2 cut(s)	855, 1012
BveI	ACCTGC	2 cut(s)	274, 895
Cac8I	GCNNGC	5 cut(s)	298, 902, 1084, 1105, 1244
CaiI	CAGNNNCTG	2 cut(s)	476, 1160
CfoI	GCGC	4 cut(s)	1115, 1141, 1372, 2062
Cfr10I	RCCGGY	1 cut(s)	296
Cfr13I	GGNCC	5 cut(s)	383, 680, 1293, 2124, 2214
Cfr42I	CCGCGG	2 cut(s)	1299, 2107
CseI	GACGC	2 cut(s)	1367, 1453
CsiI	ACCWGGT	1 cut(s)	1659
Csp6I	GTAC	6 cut(s)	826, 874, 1306, 1603, 1723, 2037
CviQI	GTAC	6 cut(s)	826, 874, 1306, 1603, 1723, 2037
DdeI	CTNAG	7 cut(s)	109, 137, 427, 772, 1320, 1423, 1475
DinI	GGCGCC	2 cut(s)	1114, 2061
DrdI	GACNNNNNNGTC	1 cut(s)	1644
DseDI	GACNNNNNNGTC	1 cut(s)	1644
EaeI	YGGCCR	4 cut(s)	314, 339, 415, 655
EagI	CGGCCG	2 cut(s)	314, 339
Eam1104I	CTCTTC	4 cut(s)	555, 990, 1123, 1710
EarI	CTCTTC	4 cut(s)	555, 990, 1123, 1710
EciI	GGCGGA	4 cut(s)	156, 390, 618, 2243
EclXI	CGGCCG	2 cut(s)	314, 339
Eco130I	CCWWGG	1 cut(s)	1707
Eco147I	AGGCCT	1 cut(s)	1542
Eco24I	GRGCYC	1 cut(s)	2253
Eco31I	GGTCTC	3 cut(s)	1522, 1652, 1669
Eco32I	GATATC	1 cut(s)	1930
Eco47I	GGWCC	4 cut(s)	383, 680, 2124, 2214
Eco52I	CGGCCG	2 cut(s)	314, 339
Eco72I	CACGTG	1 cut(s)	2097
Eco88I	CYCGRG	3 cut(s)	2131, 2246, 2279
EcoNI	CCTNNNNNAGG	1 cut(s)	594
EcoRI	GAATTC	1 cut(s)	958
EcoRII	CCWGG	3 cut(s)	589, 1574, 1659
EcoRV	GATATC	1 cut(s)	1930
EcoT14I	CCWWGG	1 cut(s)	1707
EcoT38I	GRGCYC	1 cut(s)	2253
EgeI	GGCGCC	2 cut(s)	1114, 2061
EheI	GGCGCC	2 cut(s)	1114, 2061
ErhI	CCWWGG	1 cut(s)	1707
Esp3I	CGTCTC	1 cut(s)	1436
FalI	AAGNNNNNCTT	4 cut(s)	502, 534, 1936, 1968
FaqI	GGGAC	2 cut(s)	2137, 2227
FauI	CCCGC	2 cut(s)	1408, 2218
FbaI	TGATCA	1 cut(s)	721
FblI	GTMKAC	2 cut(s)	1045, 2195
FokI	GGATG	5 cut(s)	235, 270, 319, 562, 1148
FriOI	GRGCYC	1 cut(s)	2253
FspBI	CTAG	5 cut(s)	717, 1068, 1316, 1463, 1686
GlaI	GCGC	4 cut(s)	1114, 1140, 1371, 2061
GsaI	CCCAGC	1 cut(s)	222
GsuI	CTGGAG	2 cut(s)	510, 1636
HaeII	RGCGCY	2 cut(s)	1116, 2063
HaeIII	GGCC	7 cut(s)	316, 341, 417, 657, 977, 1295, 1542
HapII	CCGG	7 cut(s)	124, 203, 297, 816, 839, 1345, 2262
HgaI	GACGC	2 cut(s)	1367, 1453
HhaI	GCGC	4 cut(s)	1115, 1141, 1372, 2062
Hin1I	GRCGYC	3 cut(s)	1113, 1445, 2060
Hin6I	GCGC	4 cut(s)	1113, 1139, 1370, 2060
HinP1I	GCGC	4 cut(s)	1113, 1139, 1370, 2060
HincII	GTYRAC	3 cut(s)	1046, 1264, 1561
HindII	GTYRAC	3 cut(s)	1046, 1264, 1561
HindIII	AAGCTT	1 cut(s)	1521
HinfI	GANTC	9 cut(s)	194, 255, 395, 406, 467, 499, 640, 880, 1849
HpaI	GTTAAC	1 cut(s)	1264
HpaII	CCGG	7 cut(s)	124, 203, 297, 816, 839, 1345, 2262
HphI	GGTGA	4 cut(s)	649, 716, 1291, 2240
Hpy166II	GTNNAC	7 cut(s)	910, 1046, 1264, 1308, 1561, 2031, 2196
Hpy8I	GTNNAC	7 cut(s)	910, 1046, 1264, 1308, 1561, 2031, 2196
Hpy99I	CGWCG	2 cut(s)	917, 2093
HpyCH4III	ACNGT	2 cut(s)	1197, 1912
HpyCH4IV	ACGT	3 cut(s)	912, 2096, 2207
HpyF3I	CTNAG	7 cut(s)	109, 137, 427, 772, 1320, 1423, 1475
HpySE526I	ACGT	3 cut(s)	912, 2096, 2207
Hsp92I	GRCGYC	3 cut(s)	1113, 1445, 2060
HspAI	GCGC	4 cut(s)	1113, 1139, 1370, 2060
KasI	GGCGCC	2 cut(s)	1112, 2059
Kpn2I	TCCGGA	3 cut(s)	123, 815, 838
KroI	GCCGGC	1 cut(s)	296
KroNI	GCCGGC	1 cut(s)	298
Ksp22I	TGATCA	1 cut(s)	721
KspAI	GTTAAC	1 cut(s)	1264
KspI	CCGCGG	2 cut(s)	1299, 2107
LmnI	GCTCC	4 cut(s)	567, 1076, 2256, 2267
LweI	GCATC	8 cut(s)	33, 334, 451, 1126, 1449, 1603, 1633, 2150
MabI	ACCWGGT	1 cut(s)	1659
MaeI	CTAG	5 cut(s)	717, 1068, 1316, 1463, 1686
MaeII	ACGT	3 cut(s)	912, 2096, 2207
MaeIII	GTNAC	4 cut(s)	1332, 1363, 1832, 1946
MfeI	CAATTG	1 cut(s)	1022
MflI	RGATCY	2 cut(s)	120, 1922
MhlI	GDGCHC	2 cut(s)	2073, 2253
MlsI	TGGCCA	1 cut(s)	657
MluCI	AATT	6 cut(s)	241, 958, 986, 1022, 1037, 1391
MluNI	TGGCCA	1 cut(s)	657
Mly113I	GGCGCC	2 cut(s)	1113, 2060
MlyI	GAGTC	3 cut(s)	264, 649, 1843
MmeI	TCCRAC	3 cut(s)	210, 972, 1877
Mox20I	TGGCCA	1 cut(s)	657
MroI	TCCGGA	3 cut(s)	123, 815, 838
MroNI	GCCGGC	1 cut(s)	296
MscI	TGGCCA	1 cut(s)	657
MseI	TTAA	6 cut(s)	240, 459, 711, 1061, 1263, 2326
MslI	CAYNNNNRTG	4 cut(s)	657, 1386, 2024, 2184
Msp20I	TGGCCA	1 cut(s)	657
MspA1I	CMGCKG	9 cut(s)	218, 473, 1082, 1092, 1160, 1298, 1386, 1760, 2106
MspI	CCGG	7 cut(s)	124, 203, 297, 816, 839, 1345, 2262
MspR9I	CCNGG	3 cut(s)	591, 1576, 1661
MunI	CAATTG	1 cut(s)	1022
Mva1269I	GAATGC	1 cut(s)	1964
MvaI	CCWGG	3 cut(s)	591, 1576, 1661
MvnI	CGCG	4 cut(s)	420, 1298, 1361, 2106
NaeI	GCCGGC	1 cut(s)	298
NarI	GGCGCC	2 cut(s)	1113, 2060
NcoI	CCATGG	1 cut(s)	1707
NgoMIV	GCCGGC	1 cut(s)	296
NmeAIII	GCCGAG	3 cut(s)	292, 367, 1473
NmuCI	GTSAC	3 cut(s)	1332, 1832, 1946
NspI	RCATGY	2 cut(s)	559, 2029
NspV	TTCGAA	1 cut(s)	48
OliI	CACNNNNGTG	1 cut(s)	1386
PaqCI	CACCTGC	1 cut(s)	274
PceI	AGGCCT	1 cut(s)	1542
PciI	ACATGT	2 cut(s)	555, 2025
PcsI	WCGNNNNNNNCGW	2 cut(s)	183, 2204
PctI	GAATGC	1 cut(s)	1964
PdiI	GCCGGC	1 cut(s)	298
PfeI	GAWTC	6 cut(s)	194, 395, 406, 467, 499, 880
PleI	GAGTC	3 cut(s)	263, 648, 1843
PluTI	GGCGCC	2 cut(s)	1116, 2063
PmaCI	CACGTG	1 cut(s)	2097
PmlI	CACGTG	1 cut(s)	2097
PpsI	GAGTC	3 cut(s)	263, 648, 1843
Ppu21I	YACGTR	1 cut(s)	2097
PscI	ACATGT	2 cut(s)	555, 2025
PshAI	GACNNNNGTC	1 cut(s)	2097
PshBI	ATTAAT	1 cut(s)	459
PsiI	TTATAA	1 cut(s)	2204
Psp1406I	AACGTT	1 cut(s)	2207
Psp6I	CCWGG	3 cut(s)	589, 1574, 1659
PspCI	CACGTG	1 cut(s)	2097
PspFI	CCCAGC	1 cut(s)	218
PspGI	CCWGG	3 cut(s)	589, 1574, 1659
PspPI	GGNCC	5 cut(s)	383, 680, 1293, 2124, 2214
PstI	CTGCAG	3 cut(s)	253, 271, 1765
PstNI	CAGNNNCTG	2 cut(s)	476, 1160
PsuI	RGATCY	2 cut(s)	120, 1922
PvuII	CAGCTG	5 cut(s)	218, 473, 1082, 1386, 1760
RsaI	GTAC	6 cut(s)	827, 875, 1307, 1604, 1724, 2038
RsaNI	GTAC	6 cut(s)	826, 874, 1306, 1603, 1723, 2037
RseI	CAYNNNNRTG	4 cut(s)	657, 1386, 2024, 2184
SacII	CCGCGG	2 cut(s)	1299, 2107
SalI	GTCGAC	1 cut(s)	1044
SaqAI	TTAA	6 cut(s)	240, 459, 711, 1061, 1263, 2326
Sau96I	GGNCC	5 cut(s)	383, 680, 1293, 2124, 2214
SbfI	CCTGCAGG	1 cut(s)	253
SchI	GAGTC	3 cut(s)	264, 649, 1843
ScrFI	CCNGG	3 cut(s)	591, 1576, 1661
SdaI	CCTGCAGG	1 cut(s)	253
SduI	GDGCHC	2 cut(s)	2073, 2253
SexAI	ACCWGGT	1 cut(s)	1659
SfaNI	GCATC	8 cut(s)	33, 334, 451, 1126, 1449, 1603, 1633, 2150
SfcI	CTRYAG	4 cut(s)	28, 249, 267, 1761
SfoI	GGCGCC	2 cut(s)	1114, 2061
Sfr303I	CCGCGG	2 cut(s)	1299, 2107
SfuI	TTCGAA	1 cut(s)	48
SgrBI	CCGCGG	2 cut(s)	1299, 2107
SinI	GGWCC	4 cut(s)	383, 680, 2124, 2214
SmiMI	CAYNNNNRTG	4 cut(s)	657, 1386, 2024, 2184
SmlI	CTYRAG	2 cut(s)	952, 1567
SmoI	CTYRAG	2 cut(s)	952, 1567
Sse8387I	CCTGCAGG	1 cut(s)	253
Sse9I	AATT	6 cut(s)	241, 958, 986, 1022, 1037, 1391
SseBI	AGGCCT	1 cut(s)	1542
SspDI	GGCGCC	2 cut(s)	1112, 2059
SspMI	CTAG	5 cut(s)	717, 1068, 1316, 1463, 1686
StuI	AGGCCT	1 cut(s)	1542
StyD4I	CCNGG	3 cut(s)	589, 1574, 1659
StyI	CCWWGG	1 cut(s)	1707
TaaI	ACNGT	2 cut(s)	1197, 1912
TaiI	ACGT	3 cut(s)	915, 2099, 2210
TaqI	TCGA	7 cut(s)	48, 153, 452, 1045, 1170, 1222, 1693
TasI	AATT	6 cut(s)	241, 958, 986, 1022, 1037, 1391
TatI	WGTACW	2 cut(s)	825, 873
TfiI	GAWTC	6 cut(s)	194, 395, 406, 467, 499, 880
Tru1I	TTAA	6 cut(s)	240, 459, 711, 1061, 1263, 2326
Tru9I	TTAA	6 cut(s)	240, 459, 711, 1061, 1263, 2326
TscAI	CASTG	2 cut(s)	862, 1012
TseFI	GTSAC	3 cut(s)	1332, 1832, 1946
Tsp45I	GTSAC	3 cut(s)	1332, 1832, 1946
TspRI	CASTG	2 cut(s)	862, 1012
VpaK11BI	GGWCC	4 cut(s)	383, 680, 2124, 2214
VspI	ATTAAT	1 cut(s)	459
XagI	CCTNNNNNAGG	1 cut(s)	594
XapI	RAATTY	1 cut(s)	958
XceI	RCATGY	2 cut(s)	559, 2029
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2053
XmiI	GTMKAC	2 cut(s)	1045, 2195
XspI	CTAG	5 cut(s)	717, 1068, 1316, 1463, 1686

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.