Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0006359

Physical Location & Seq

Genomic Coordinates Reverse (-)

16284775 .. 16295578

Gene Structure 10804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1181200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3135 bp

ATGACGGCCGCCATCGCCGAGAGGGCGGAGCTCGCCAAGCTCTGCAGCTCACGTGACTGGTCCAAGGCCATCCGAGTCCTCGACTCCCTCCTCTCCCAGTCCTCTTCCATCCAAGATATCTGCAACAGAGCTTTCTGTTACAGCCAATTGGAGCTCCACAAGCACGTGATTAAGGACTGCGATAGGGCGCTTCAGCTGGATTCCGCGCTTCTTCAAGCTTACATCCTCAAAGGTCGTGCATTTTCTGCTTTGGGAAGGAAAGAGGATGCTCTTTTGGTTTGGGAGCAAGGCTATGAACATGCCTTCCGTCAGTCTACAGATTTGAAGCAGTTGCTAGAACTGGAAGAGCTTTTAACAATTGCAAAGAAGGACAAAAGTAATGGATATGAAAACCAAGCAAAAGACTCAACATCATCTAACCTTGCATCCGAAGCAAGACTGCATGTTAATGGGAAATCTAGTGAAACTTATAAGAATGACAATAAATTAAGTGGTGAATCAGAGTTATGCAGTGAATCAACGGTTACCTCAGAGGTCCATAGAAAGTCTAATGGTAATTTTGTTGCATTGAAGGGAATTGGTGATAAAGCCGGAGGGAGTAAGAAGTTTGATAGCCAAATGAATGGGAATCATGATAGTCATGATAAATTAAGTTCTGAATCATGCAAAGACTTAAGTGATACATGCAGTAAATTACCTATGATTTGTAGCAAGTCAAGTGATTTAATAGAAACTCCTCCCACACCCCCTAAACTAAGTAGTAAATCTGATATACGTCATGAAATTGGCGAGGAGTCCAAGAAAAATAAAAAGTTCTCCGTTGCTAGACTTTCAAAGACCAAGTCAATAAGTGTGGATTTTCGACTATCAAGGGGTATAGCAGAGGTTAATGAAGGGAAGTATGCTCATGCCATATCAATATTTGACCAGATATTGAAGGAGGATCCTAACTATCCAGAGGCACTAATAGGGAGAGGGACAGCCTATGCTTTCCAACGGGAACTTGAGGCTGCGATAGCTGATTTTACAAAGGCCATGGAATCAAATCCATCAGCTTGTGAGGCATGGAAACGGAGAGGGCAAGCACGAGCTGCCATGGGAGAATTTGTTGAGGCCATTGAAGATTTGTCCAAGGCATTAGAGTTTGAACCAAATTCAGCTGACATTTTGCACGAAAGGGGAATTGCCAACTTCAAGTTCAAGGACTTCTACACTGCCATTGAAGATCTATCTGCATGCGTGAAACTTGACAAGGATAATACATCTGCTTACACATATTTGGGTTTGGCATTGTCTTCTATCGGTGAATATAAAAAAGCTGAGGAGGCACATTTGAAAGCAATTCAGCTGGATCAGAATTTTCTTGAGGCATGGGTGCAGCTAACCCAGTTCTATCAAGATATGGCAAACCCAACCAAGGCTTTGGAATGTCTGCAGAAAGCTCTACAAATTGATGGAAGGTTTGCCAAAGCATATCATTTGCGTGGACTCCTGCTTCATGGGATGGGAGAACACAGCAAGGCTATTAAGGATTTGTCAACTGGGTTGAGCATTGAGGGTGCCAATATTGAGTGCTTGTATTTGCGGGCATCCTGCTACCATGCCCTTGGAGAATATGGACATGCGGTCAAGGACTACGATGCTGTGCTTGATTTGGAGCTAGACTCTATGGAGAAGTTTGTGTTGCAATGCCTTGCTTTTTATCAGAAAGAGATTGCTCTATACACAGCATCAAAAATCAACAGTGAATTTTACTGGTTTGATATTGATGGAGATATTGATTCACTTTTCAAGGAGTACTGGTGCAAGAGATTGCACCCCAAGAATGTATGCGAAAAGGTCTATCGACAACCTCCCCTGCGTGAATCTTTGAAGAAGGGCAAGGTTCGAAAGCAAGAATTTTCAGTTACAAAGCAGAAGGCTGCTCTTCTGCAAGCTGCGGATTCAATTGGAAGGAAAATCCAATATGATAGTCCTGGCTTCTTACCGAATCGACGTCAGCATCGTATGGCAGGATTGGCTGCTATTGAGGTTGCTCAAAAGGTTTCAAAAGCATGGCGTTCCTTCCAAGCGGAATGGAAATATTCTAATAATAAAAGCATCTCAAAGTCTGGTAAGCGAGGCCGGAGAAGGGAAAGAGTTAATTTGCCCAGCCAGAATAGAGGTGGTGCTGGTTGTAGTACGAGTAGCTCTTCAGAGACCTCAACCTCATATGGAATTACAGAAGCTAATTCATCTGCACGGTCAATGATGTCATGGCATGAGGTTTATTCGATAGCTGTCAAATGGCGGCAGATTTCTGAGCCATGCGATCCTGTTGTGTGGATTAACAAGCTAAGCGAAGAGTTTAATGCTGGATTTGGGTCTCATACACCATTGATCCTAGGCCAAGCAAAAGTTGTTCGCTACTTCCCAAATTTTGAAAGAACATTAAATGTCGCCAAGGCTATTATGAAGGAAAGATCTTATGTGTATAGTAAGGTCGATAACCTTATTGATTTATCCAGGGATGGGAAATTGCAAGATATTATGCAAGCAAAATCTTGCGCTGACTTATACAGAGTGGTCGGTGAGGACTTCTGGTTGTCTACTTGGTGCGATAGTACTGCCTTTGAGGGGAGGCAACTTGAAGGAACGAGGATTACCCTAGTAAAAATGGGGGAGAACAAATATGAATTTGCAATCAGAACACCTTGTACGCCTTCAAGGTGGGATGAATTTGATGCAGAAATGGCGAAGGCATGGGAAGCTATATGCAACACTTATTGCGGTGAAAATTATGGATCTAATGAATTCACCGTGGTTGAAAAAGTGAGAGATGCGATCTTAAGGATGACATATTACTGGTACAATTTTATGCCTCTTTCAAGAGGCTCTGCTGCTGTGGGGTTTGTTGTTATGCTCGGATTATTTCTTGCTGCTAATATGGAGTTCATAGGAAATATCCCACAAGGTTTACAGGTAGATTGGGAAGCCATTCTGAACTCTGATCCAGACTCGTTTGTTTATTCGATGAAGACTTGGCTATATCCATGTCTGAAGGCAACAACATCCTGGAAAGATCATCCCGATGTGCAATCAACTCTCGCCACAACCGGTTCAGTTGTTGCTGCTCTGAGCACTTATGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031348 GO:0032947 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045892 GO:0045934 GO:0048471 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0098542 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_16 TPR_7 TPR_8

Protein Analysis

1045

Amino Acids

117.34

Weight (kDa)

6.88

Isoelectric Point (pI)

39.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_1	PF00515	354 - 385	4.9e-07	Tetratricopeptide repeat
TPR_11	PF13414	360 - 399	1.9e-06	TPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37460 AT4G37460
fragaria_vesca	FvH4_1g17100 FvH4_1g17100 FvH4_1g17100
malus_domestica	MD02G1181200.v1.1 MD15G1292200.v1.1 MD15G1292300.v1.1
prunus_persica	Prupe.6G225100_v2.0.a1
pyrus_communis	pycom02g14710 pycom15g25540
rosa_chinensis	RchiOBHm_Chr1g0315291 RchiOBHm_Chr2g0107271
rosa_laevigata	RLG00000017566
rosa_roxburghii	Rroxscaffold_2G00136490 Rroxscaffold_5G00354870
rosa_rugosa	Rorug02G0141400 Rorug02G0141400
rosa_samantha	Rh2AG192200 Rh2BG204100 Rh2CG197500 Rh2DG199500 Rh3CG136000 Rh3DG316900 Rh4DG318400 Rh5AG412800
rosa_wichuraiana	Rw2G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	471
AatII	GACGTC	1 cut(s)	1999
AccB1I	GGYRCC	1 cut(s)	1559
AccI	GTMKAC	2 cut(s)	314, 2588
AccII	CGCG	1 cut(s)	206
AciI	CCGC	9 cut(s)	9, 26, 204, 1585, 1625, 1940, 2072, 2290, 2769
AclWI	GGATC	7 cut(s)	938, 951, 1359, 2306, 2374, 2791, 2984
AcoI	YGGCCR	1 cut(s)	6
AcsI	RAATTY	9 cut(s)	1103, 1153, 1357, 1748, 1898, 2416, 2675, 2717, 2792
AcuI	CTGAAG	3 cut(s)	176, 2178, 3059
AcvI	CACGTG	2 cut(s)	53, 166
AcyI	GRCGYC	1 cut(s)	1996
AfaI	GTAC	5 cut(s)	1799, 2182, 2605, 2698, 2849
AfiI	CCNNNNNNNGG	4 cut(s)	1417, 2131, 2511, 2616
AflII	CTTAAG	2 cut(s)	673, 2827
AgeI	ACCGGT	1 cut(s)	3095
AhdI	GACNNNNNGTC	1 cut(s)	1625
AjnI	CCWGG	3 cut(s)	1975, 2504, 3053
AjuI	GAANNNNNNNTTGG	2 cut(s)	1181, 1213
AloI	GAACNNNNNNTCC	2 cut(s)	288, 320
Alw21I	GWGCWC	3 cut(s)	33, 156, 3122
Alw26I	GTCTC	2 cut(s)	2192, 2370
AlwI	GGATC	7 cut(s)	938, 951, 1359, 2306, 2374, 2791, 2984
AoxI	GGCC	6 cut(s)	6, 66, 1032, 1113, 2122, 2386
ApoI	RAATTY	9 cut(s)	1103, 1153, 1357, 1748, 1898, 2416, 2675, 2717, 2792
ArsI	GACNNNNNNTTYG	2 cut(s)	827, 859
AsiGI	ACCGGT	1 cut(s)	3095
Asp700I	GAANNNNTTC	1 cut(s)	2976
AspA2I	CCTAGG	1 cut(s)	2383
AspLEI	GCGC	3 cut(s)	190, 208, 2549
AspS9I	GGNCC	2 cut(s)	60, 535
AsuHPI	GGTGA	6 cut(s)	506, 593, 1316, 2582, 2783, 2788
AsuII	TTCGAA	1 cut(s)	1888
AvaII	GGWCC	2 cut(s)	60, 535
AvrII	CCTAGG	1 cut(s)	2383
BamHI	GGATCC	1 cut(s)	943
BanI	GGYRCC	1 cut(s)	1559
BanII	GRGCYC	2 cut(s)	33, 156
BauI	CACGAG	1 cut(s)	1086
BbrPI	CACGTG	2 cut(s)	53, 166
BbsI	GAAGAC	2 cut(s)	1287, 3023
Bbv12I	GWGCWC	3 cut(s)	33, 156, 3122
BbvCI	CCTCAGC	1 cut(s)	1320
BccI	CCATC	8 cut(s)	20, 77, 116, 1057, 1448, 1498, 1763, 2504
BceAI	ACGGC	1 cut(s)	21
BcgI	CGANNNNNNTGC	2 cut(s)	2588, 2622
BciT130I	CCWGG	3 cut(s)	1977, 2506, 3055
BcoDI	GTCTC	2 cut(s)	2192, 2370
BfaI	CTAG	6 cut(s)	335, 459, 825, 1661, 2384, 2648
BfmI	CTRYAG	3 cut(s)	43, 315, 1433
BfoI	RGCGCY	1 cut(s)	191
BfrI	CTTAAG	2 cut(s)	673, 2827
BglI	GCCNNNNNGGC	1 cut(s)	23
BglII	AGATCT	2 cut(s)	1225, 2462
BlnI	CCTAGG	1 cut(s)	2383
BlpI	GCTNAGC	1 cut(s)	2336
BmcAI	AGTACT	2 cut(s)	1799, 2605
Bme1390I	CCNGG	3 cut(s)	1977, 2506, 3055
Bme18I	GGWCC	2 cut(s)	60, 535
BmeRI	GACNNNNNGTC	1 cut(s)	1625
BmgT120I	GGNCC	2 cut(s)	60, 535
BmiI	GGNNCC	2 cut(s)	945, 1561
BmrFI	CCNGG	3 cut(s)	1977, 2506, 3055
BmrI	ACTGGG	3 cut(s)	91, 1381, 1551
BmsI	GCATC	9 cut(s)	256, 434, 1598, 1630, 1739, 2011, 2109, 2713, 2809
BmuI	ACTGGG	3 cut(s)	91, 1381, 1551
BpiI	GAAGAC	2 cut(s)	1287, 3023
BplI	GAGNNNNNCTC	2 cut(s)	1649, 1681
Bpu10I	CCTNAGC	1 cut(s)	1320
Bpu1102I	GCTNAGC	1 cut(s)	2336
Bpu14I	TTCGAA	1 cut(s)	1888
BpuEI	CTTGAG	2 cut(s)	1025, 1385
BsaAI	YACGTR	2 cut(s)	53, 166
BsaHI	GRCGYC	1 cut(s)	1996
BsaI	GGTCTC	2 cut(s)	2192, 2370
BsaWI	WCCGGW	1 cut(s)	3095
BsaXI	ACNNNNNCTCC	4 cut(s)	1092, 1122, 1787, 1817
Bsc4I	CCNNNNNNNGG	4 cut(s)	1417, 2131, 2511, 2616
Bse118I	RCCGGY	1 cut(s)	3095
Bse1I	ACTGG	8 cut(s)	62, 97, 345, 1387, 1546, 1760, 1805, 2849
Bse3DI	GCAATG	1 cut(s)	1694
BseBI	CCWGG	3 cut(s)	1977, 2506, 3055
BseLI	CCNNNNNNNGG	4 cut(s)	1417, 2131, 2511, 2616
BseMI	GCAATG	1 cut(s)	1694
BseMII	CTCAG	4 cut(s)	543, 1311, 2292, 3107
BseNI	ACTGG	8 cut(s)	62, 97, 345, 1387, 1546, 1760, 1805, 2849
BseRI	GAGGAG	4 cut(s)	80, 726, 806, 1337
BseX3I	CGGCCG	1 cut(s)	6
BseYI	CCCAGC	1 cut(s)	2150
BsgI	GTGCAG	2 cut(s)	1397, 2223
Bsh1236I	CGCG	1 cut(s)	206
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	6 cut(s)	8, 68, 1034, 1115, 2124, 2388
BshNI	GGYRCC	1 cut(s)	1559
BshTI	ACCGGT	1 cut(s)	3095
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	3 cut(s)	33, 156, 3122
BsiSI	CCGG	3 cut(s)	591, 2125, 3096
BslFI	GGGAC	1 cut(s)	991
BslI	CCNNNNNNNGG	4 cut(s)	1417, 2131, 2511, 2616
BsmAI	GTCTC	2 cut(s)	2192, 2370
BsmFI	GGGAC	1 cut(s)	991
BsnI	GGCC	6 cut(s)	8, 68, 1034, 1115, 2124, 2388
Bso31I	GGTCTC	2 cut(s)	2192, 2370
Bsp119I	TTCGAA	1 cut(s)	1888
Bsp1286I	GDGCHC	3 cut(s)	33, 156, 3122
Bsp1720I	GCTNAGC	1 cut(s)	2336
Bsp19I	CCATGG	2 cut(s)	1035, 1095
BspACI	CCGC	9 cut(s)	9, 26, 204, 1585, 1625, 1940, 2072, 2290, 2769
BspANI	GGCC	6 cut(s)	8, 68, 1034, 1115, 2124, 2388
BspCNI	CTCAG	4 cut(s)	542, 1312, 2293, 3108
BspFNI	CGCG	1 cut(s)	206
BspHI	TCATGA	3 cut(s)	631, 640, 778
BspLI	GGNNCC	2 cut(s)	945, 1561
BspMAI	CTGCAG	2 cut(s)	47, 1437
BspPI	GGATC	7 cut(s)	938, 951, 1359, 2306, 2374, 2791, 2984
BspQI	GCTCTTC	3 cut(s)	339, 1932, 2197
BspT104I	TTCGAA	1 cut(s)	1888
BspT107I	GGYRCC	1 cut(s)	1559
BspTI	CTTAAG	2 cut(s)	673, 2827
BspTNI	GGTCTC	2 cut(s)	2192, 2370
BsrDI	GCAATG	1 cut(s)	1694
BsrFI	RCCGGY	1 cut(s)	3095
BsrI	ACTGG	8 cut(s)	62, 97, 345, 1387, 1546, 1760, 1805, 2849
BssAI	RCCGGY	1 cut(s)	3095
BssNI	GRCGYC	1 cut(s)	1996
BssSI	CACGAG	1 cut(s)	1086
BssT1I	CCWWGG	8 cut(s)	63, 1035, 1095, 1131, 1416, 1606, 2383, 2442
Bst2BI	CACGAG	1 cut(s)	1086
Bst2UI	CCWGG	3 cut(s)	1977, 2506, 3055
Bst4CI	ACNGT	4 cut(s)	523, 1745, 2244, 2800
Bst6I	CTCTTC	5 cut(s)	109, 339, 1932, 2197, 2337
BstACI	GRCGYC	1 cut(s)	1996
BstAFI	CTTAAG	2 cut(s)	673, 2827
BstAPI	GCANNNNNTGC	2 cut(s)	245, 1091
BstBAI	YACGTR	2 cut(s)	53, 166
BstBI	TTCGAA	1 cut(s)	1888
BstC8I	GCNNGC	6 cut(s)	33, 1083, 1237, 1587, 1935, 2535
BstDEI	CTNAG	6 cut(s)	529, 755, 1320, 2301, 2336, 3116
BstDSI	CCRYGG	3 cut(s)	1035, 1095, 2799
BstEII	GGTNACC	1 cut(s)	523
BstFNI	CGCG	1 cut(s)	206
BstH2I	RGCGCY	1 cut(s)	191
BstHHI	GCGC	3 cut(s)	190, 208, 2549
BstMAI	GTCTC	2 cut(s)	2192, 2370
BstMCI	CGRYCG	1 cut(s)	9
BstNI	CCWGG	3 cut(s)	1977, 2506, 3055
BstNSI	RCATGY	5 cut(s)	302, 446, 687, 1239, 1625
BstPI	GGTNACC	1 cut(s)	523
BstSCI	CCNGG	3 cut(s)	1975, 2504, 3053
BstSFI	CTRYAG	3 cut(s)	43, 315, 1433
BstUI	CGCG	1 cut(s)	206
BstV2I	GAAGAC	2 cut(s)	1287, 3023
BstX2I	RGATCY	4 cut(s)	943, 1225, 2462, 2783
BstXI	CCANNNNNNTGG	3 cut(s)	623, 1423, 1607
BstYI	RGATCY	4 cut(s)	943, 1225, 2462, 2783
BstZI	CGGCCG	1 cut(s)	6
BsuRI	GGCC	6 cut(s)	8, 68, 1034, 1115, 2124, 2388
BtgI	CCRYGG	3 cut(s)	1035, 1095, 2799
BtsI	GCAGTG	2 cut(s)	517, 1212
BtsIMutI	CAGTG	3 cut(s)	517, 1212, 1750
Cac8I	GCNNGC	6 cut(s)	33, 1083, 1237, 1587, 1935, 2535
CciI	TCATGA	3 cut(s)	631, 640, 778
CfoI	GCGC	3 cut(s)	190, 208, 2549
Cfr10I	RCCGGY	1 cut(s)	3095
Cfr13I	GGNCC	2 cut(s)	60, 535
Csp6I	GTAC	5 cut(s)	1798, 2181, 2604, 2697, 2848
CspAI	ACCGGT	1 cut(s)	3095
CspCI	CAANNNNNGTGG	2 cut(s)	834, 869
CviQI	GTAC	5 cut(s)	1798, 2181, 2604, 2697, 2848
DdeI	CTNAG	6 cut(s)	529, 755, 1320, 2301, 2336, 3116
DriI	GACNNNNNGTC	1 cut(s)	1625
EaeI	YGGCCR	1 cut(s)	6
EagI	CGGCCG	1 cut(s)	6
Eam1104I	CTCTTC	5 cut(s)	109, 339, 1932, 2197, 2337
Eam1105I	GACNNNNNGTC	1 cut(s)	1625
EarI	CTCTTC	5 cut(s)	109, 339, 1932, 2197, 2337
EciI	GGCGGA	1 cut(s)	41
Ecl136II	GAGCTC	2 cut(s)	31, 154
EclXI	CGGCCG	1 cut(s)	6
Eco130I	CCWWGG	8 cut(s)	63, 1035, 1095, 1131, 1416, 1606, 2383, 2442
Eco24I	GRGCYC	2 cut(s)	33, 156
Eco31I	GGTCTC	2 cut(s)	2192, 2370
Eco32I	GATATC	1 cut(s)	118
Eco47I	GGWCC	2 cut(s)	60, 535
Eco52I	CGGCCG	1 cut(s)	6
Eco53kI	GAGCTC	2 cut(s)	31, 154
Eco57I	CTGAAG	3 cut(s)	176, 2178, 3059
Eco72I	CACGTG	2 cut(s)	53, 166
Eco91I	GGTNACC	1 cut(s)	523
EcoICRI	GAGCTC	2 cut(s)	31, 154
EcoO65I	GGTNACC	1 cut(s)	523
EcoRI	GAATTC	1 cut(s)	2792
EcoRII	CCWGG	3 cut(s)	1975, 2504, 3053
EcoRV	GATATC	1 cut(s)	118
EcoT14I	CCWWGG	8 cut(s)	63, 1035, 1095, 1131, 1416, 1606, 2383, 2442
EcoT38I	GRGCYC	2 cut(s)	33, 156
ErhI	CCWWGG	8 cut(s)	63, 1035, 1095, 1131, 1416, 1606, 2383, 2442
FaqI	GGGAC	1 cut(s)	991
FauI	CCCGC	1 cut(s)	1578
FauNDI	CATATG	1 cut(s)	2212
FblI	GTMKAC	2 cut(s)	314, 2588
FriOI	GRGCYC	2 cut(s)	33, 156
FspBI	CTAG	6 cut(s)	335, 459, 825, 1661, 2384, 2648
GlaI	GCGC	3 cut(s)	189, 207, 2548
GsaI	CCCAGC	1 cut(s)	2154
HaeII	RGCGCY	1 cut(s)	191
HaeIII	GGCC	6 cut(s)	8, 68, 1034, 1115, 2124, 2388
HapII	CCGG	3 cut(s)	591, 2125, 3096
HhaI	GCGC	3 cut(s)	190, 208, 2549
Hin1I	GRCGYC	1 cut(s)	1996
Hin6I	GCGC	3 cut(s)	188, 206, 2547
HinP1I	GCGC	3 cut(s)	188, 206, 2547
HincII	GTYRAC	1 cut(s)	1539
HindII	GTYRAC	1 cut(s)	1539
HindIII	AAGCTT	1 cut(s)	216
HpaII	CCGG	3 cut(s)	591, 2125, 3096
HphI	GGTGA	6 cut(s)	506, 593, 1316, 2582, 2783, 2788
Hpy166II	GTNNAC	5 cut(s)	315, 1487, 1539, 2589, 2957
Hpy188III	TCNNGA	9 cut(s)	632, 641, 779, 956, 1364, 1397, 2868, 2993, 3068
Hpy8I	GTNNAC	5 cut(s)	315, 1487, 1539, 2589, 2957
Hpy99I	CGWCG	1 cut(s)	1998
HpyCH4III	ACNGT	4 cut(s)	523, 1745, 2244, 2800
HpyCH4IV	ACGT	4 cut(s)	52, 165, 775, 1996
HpyF3I	CTNAG	6 cut(s)	529, 755, 1320, 2301, 2336, 3116
HpySE526I	ACGT	4 cut(s)	52, 165, 775, 1996
Hsp92I	GRCGYC	1 cut(s)	1996
HspAI	GCGC	3 cut(s)	188, 206, 2547
LguI	GCTCTTC	3 cut(s)	339, 1932, 2197
LmnI	GCTCC	5 cut(s)	28, 151, 159, 283, 1657
LweI	GCATC	9 cut(s)	256, 434, 1598, 1630, 1739, 2011, 2109, 2713, 2809
MaeI	CTAG	6 cut(s)	335, 459, 825, 1661, 2384, 2648
MaeII	ACGT	4 cut(s)	52, 165, 775, 1996
MaeIII	GTNAC	4 cut(s)	53, 137, 523, 1906
MfeI	CAATTG	3 cut(s)	146, 357, 1947
MflI	RGATCY	4 cut(s)	943, 1225, 2462, 2783
MhlI	GDGCHC	3 cut(s)	33, 156, 3122
MlyI	GAGTC	7 cut(s)	77, 84, 398, 803, 1482, 1658, 2990
MmeI	TCCRAC	1 cut(s)	1018
MroXI	GAANNNNTTC	1 cut(s)	2976
MslI	CAYNNNNRTG	3 cut(s)	447, 1482, 3069
MspA1I	CMGCKG	3 cut(s)	196, 1160, 1348
MspCI	CTTAAG	2 cut(s)	673, 2827
MspI	CCGG	3 cut(s)	591, 2125, 3096
MspR9I	CCNGG	3 cut(s)	1977, 2506, 3055
MunI	CAATTG	3 cut(s)	146, 357, 1947
MvaI	CCWGG	3 cut(s)	1977, 2506, 3055
MvnI	CGCG	1 cut(s)	206
NcoI	CCATGG	2 cut(s)	1035, 1095
NdeI	CATATG	1 cut(s)	2212
NlaIV	GGNNCC	2 cut(s)	945, 1561
NmeAIII	GCCGAG	1 cut(s)	43
NmuCI	GTSAC	1 cut(s)	53
NspI	RCATGY	5 cut(s)	302, 446, 687, 1239, 1625
NspV	TTCGAA	1 cut(s)	1888
PaeI	GCATGC	1 cut(s)	1239
PagI	TCATGA	3 cut(s)	631, 640, 778
PciSI	GCTCTTC	3 cut(s)	339, 1932, 2197
PcsI	WCGNNNNNNNCGW	1 cut(s)	2002
PdmI	GAANNNNTTC	1 cut(s)	2976
PflFI	GACNNNGTC	1 cut(s)	841
PfoI	TCCNGGA	1 cut(s)	3053
PinAI	ACCGGT	1 cut(s)	3095
PleI	GAGTC	7 cut(s)	77, 83, 398, 802, 1482, 1658, 2990
PmaCI	CACGTG	2 cut(s)	53, 166
PmlI	CACGTG	2 cut(s)	53, 166
PpsI	GAGTC	7 cut(s)	77, 83, 398, 802, 1482, 1658, 2990
Ppu21I	YACGTR	2 cut(s)	53, 166
PsiI	TTATAA	1 cut(s)	471
Psp124BI	GAGCTC	2 cut(s)	33, 156
Psp6I	CCWGG	3 cut(s)	1975, 2504, 3053
PspCI	CACGTG	2 cut(s)	53, 166
PspEI	GGTNACC	1 cut(s)	523
PspFI	CCCAGC	1 cut(s)	2150
PspGI	CCWGG	3 cut(s)	1975, 2504, 3053
PspN4I	GGNNCC	2 cut(s)	945, 1561
PspPI	GGNCC	2 cut(s)	60, 535
PsrI	GAACNNNNNNTAC	4 cut(s)	2626, 2658, 2680, 2712
PstI	CTGCAG	2 cut(s)	47, 1437
PsuI	RGATCY	4 cut(s)	943, 1225, 2462, 2783
PsyI	GACNNNGTC	1 cut(s)	841
PvuII	CAGCTG	3 cut(s)	196, 1160, 1348
RsaI	GTAC	5 cut(s)	1799, 2182, 2605, 2698, 2849
RsaNI	GTAC	5 cut(s)	1798, 2181, 2604, 2697, 2848
RseI	CAYNNNNRTG	3 cut(s)	447, 1482, 3069
SacI	GAGCTC	2 cut(s)	33, 156
SapI	GCTCTTC	3 cut(s)	339, 1932, 2197
Sau96I	GGNCC	2 cut(s)	60, 535
ScaI	AGTACT	2 cut(s)	1799, 2605
SchI	GAGTC	7 cut(s)	77, 84, 398, 803, 1482, 1658, 2990
ScrFI	CCNGG	3 cut(s)	1977, 2506, 3055
SduI	GDGCHC	3 cut(s)	33, 156, 3122
SfaNI	GCATC	9 cut(s)	256, 434, 1598, 1630, 1739, 2011, 2109, 2713, 2809
SfcI	CTRYAG	3 cut(s)	43, 315, 1433
SfuI	TTCGAA	1 cut(s)	1888
SinI	GGWCC	2 cut(s)	60, 535
SmiMI	CAYNNNNRTG	3 cut(s)	447, 1482, 3069
SmlI	CTYRAG	4 cut(s)	673, 1004, 1364, 2827
SmoI	CTYRAG	4 cut(s)	673, 1004, 1364, 2827
SphI	GCATGC	1 cut(s)	1239
SsiI	CCGC	9 cut(s)	9, 26, 204, 1585, 1625, 1940, 2072, 2290, 2769
SspI	AATATT	3 cut(s)	921, 1567, 2084
SspMI	CTAG	6 cut(s)	335, 459, 825, 1661, 2384, 2648
SstI	GAGCTC	2 cut(s)	33, 156
StyD4I	CCNGG	3 cut(s)	1975, 2504, 3053
StyI	CCWWGG	8 cut(s)	63, 1035, 1095, 1131, 1416, 1606, 2383, 2442
TaaI	ACNGT	4 cut(s)	523, 1745, 2244, 2800
TaiI	ACGT	4 cut(s)	55, 168, 778, 1999
TaqI	TCGA	8 cut(s)	81, 862, 1846, 1888, 1993, 2273, 2484, 3011
TatI	WGTACW	2 cut(s)	1797, 2603
TauI	GCSGC	2 cut(s)	11, 2293
TscAI	CASTG	3 cut(s)	517, 1219, 1750
TseFI	GTSAC	1 cut(s)	53
Tsp45I	GTSAC	1 cut(s)	53
TspGWI	ACGGA	3 cut(s)	296, 808, 1087
TspRI	CASTG	3 cut(s)	517, 1219, 1750
Tth111I	GACNNNGTC	1 cut(s)	841
Vha464I	CTTAAG	2 cut(s)	673, 2827
VpaK11BI	GGWCC	2 cut(s)	60, 535
XapI	RAATTY	9 cut(s)	1103, 1153, 1357, 1748, 1898, 2416, 2675, 2717, 2792
XceI	RCATGY	5 cut(s)	302, 446, 687, 1239, 1625
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2162
XmaJI	CCTAGG	1 cut(s)	2383
XmiI	GTMKAC	2 cut(s)	314, 2588
XmnI	GAANNNNTTC	1 cut(s)	2976
XspI	CTAG	6 cut(s)	335, 459, 825, 1661, 2384, 2648
ZraI	GACGTC	1 cut(s)	1997
ZrmI	AGTACT	2 cut(s)	1799, 2605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.