Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0010698

Physical Location & Seq

Genomic Coordinates Forward (+)

16851363 .. 16854525

Gene Structure 3163 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1185400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 726 bp

ATGAGTTTGGTGAAGTTATTGAAACCGTCGATTTGTGGCCCCCCGCGGGACATTGAATCTGGACCGTTGGTGGCGGTGGCGCCGTCGTTGTCGGCGGCGAAGCTGGGGGTTTCGAAGATGAAAAAGGCCGGCGCTGCGATTGGATCCAGGCTTTTGCGCCCCATTAAGGCAATGGAGGATCCGACAGTTTCTTTGAGGAATGATTACCCCGCCATTTCTGGTAGAAATTTGCACCAGATGTCAACAATGGATAACTCGGCAAACATTGTGTGGCATAAGTGCTCGGTGGAGAAACTTGATAGGCAACAATTGCTTAAGCAGAAAGGCTGTGTCATATGGATTACTGGTCTAAGTGGTTCAGGAAAAAGCACTGTGGCATGTGCTTTGAGTCAAGGCCTGCACATGAGAGGAAAGCTCACCTACATCCTTGATGGTGACAATGTTCGTCATGGTCTAAATCGTGATCTTAGTTTCAAAGCAGAAGATCGTGCAGAAAACATACGAAGAATTGCCGAGGTAGCTAAGCTCTTTGCGGATGCTGGCATCATTTGTATTGCTAGCTTAATATCTCCCTACAGAAAGGACCGAGATGCCTGCCGTGCACTATTTCCCGAAGGAGATTTTATTGAGGTGTACATGGATGTGCCACTGCATGTGTGTGAGAATAGGGACCCAAAGGGACTCTACAAGCTTGCACGAGCTGGAAAAATTAAAAGTATTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000103 GO:0003674 GO:0003824 GO:0004020 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006790 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00230 ko00920 ko01100 ko01120 map00230 map00920 map01100 map01120

Pfam Domains

Protein Families

APS_kinase

Protein Analysis

242

Amino Acids

26.37

Weight (kDa)

9.55

Isoelectric Point (pI)

39.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APS_kinase	PF01583	108 - 240	1.9e-60	Adenylylsulphate kinase
AAA_33	PF13671	111 - 223	5.5e-07	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010698)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39940
fragaria_vesca	FvH4_1g17660 FvH4_1g17660
malus_domestica	MD02G1185400.v1.1 MD15G1297000.v1.1
prunus_persica	Prupe.6G221200_v2.0.a1
pyrus_communis	pycom02g15040 pycom02g15050 pycom15g26000
rosa_chinensis	RchiOBHm_Chr2g0107981
rosa_laevigata	RLG00000017631
rosa_multiflora	Rmu_sc0001484.1_g000028
rosa_roxburghii	Rroxscaffold_2G00135760
rosa_rugosa	Rorug02G0149200 Rorug02G0149300 Rorug02G0149300
rosa_samantha	Rh2BG211300 Rh2CG203100 Rh2DG206100
rosa_wichuraiana	Rw2G015750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	79
AccII	CGCG	1 cut(s)	46
AciI	CCGC	6 cut(s)	44, 46, 74, 95, 210, 533
AclWI	GGATC	4 cut(s)	138, 151, 173, 186
AcsI	RAATTY	1 cut(s)	226
AcyI	GRCGYC	1 cut(s)	80
AfaI	GTAC	1 cut(s)	635
AfiI	CCNNNNNNNGG	2 cut(s)	46, 166
AflII	CTTAAG	1 cut(s)	314
AgsI	TTSAA	3 cut(s)	22, 56, 475
AjnI	CCWGG	1 cut(s)	146
AluBI	AGCT	7 cut(s)	103, 415, 521, 526, 561, 691, 701
AluI	AGCT	7 cut(s)	103, 415, 521, 526, 561, 691, 701
Alw21I	GWGCWC	2 cut(s)	284, 604
Alw44I	GTGCAC	1 cut(s)	600
AlwI	GGATC	4 cut(s)	138, 151, 173, 186
AoxI	GGCC	3 cut(s)	37, 126, 394
ApaLI	GTGCAC	1 cut(s)	600
ApeKI	GCWGC	1 cut(s)	134
ApoI	RAATTY	1 cut(s)	226
ArsI	GACNNNNNNTTYG	2 cut(s)	175, 207
AspLEI	GCGC	3 cut(s)	82, 134, 159
AspS9I	GGNCC	4 cut(s)	38, 62, 583, 670
AsuHPI	GGTGA	3 cut(s)	22, 409, 446
AsuII	TTCGAA	1 cut(s)	113
AsuNHI	GCTAGC	1 cut(s)	557
AvaII	GGWCC	3 cut(s)	62, 583, 670
BaeGI	GKGCMC	1 cut(s)	604
BamHI	GGATCC	2 cut(s)	143, 178
BanI	GGYRCC	1 cut(s)	79
BauI	CACGAG	1 cut(s)	696
Bbv12I	GWGCWC	2 cut(s)	284, 604
BbvI	GCAGC	1 cut(s)	121
BccI	CCATC	1 cut(s)	425
BceAI	ACGGC	2 cut(s)	67, 582
BcgI	CGANNNNNNTGC	2 cut(s)	576, 610
BciT130I	CCWGG	1 cut(s)	148
BfaI	CTAG	2 cut(s)	558, 724
BfmI	CTRYAG	1 cut(s)	574
BfoI	RGCGCY	2 cut(s)	83, 135
BfrI	CTTAAG	1 cut(s)	314
BisI	GCNGC	2 cut(s)	96, 135
BlpI	GCTNAGC	1 cut(s)	522
BlsI	GCNGC	2 cut(s)	97, 136
Bme1390I	CCNGG	1 cut(s)	148
Bme18I	GGWCC	3 cut(s)	62, 583, 670
BmgT120I	GGNCC	4 cut(s)	38, 62, 583, 670
BmiI	GGNNCC	6 cut(s)	40, 81, 145, 180, 671, 672
BmrFI	CCNGG	1 cut(s)	148
BmsI	GCATC	3 cut(s)	526, 552, 580
BmtI	GCTAGC	1 cut(s)	561
BplI	GAGNNNNNCTC	2 cut(s)	399, 431
Bpu1102I	GCTNAGC	1 cut(s)	522
Bpu14I	TTCGAA	1 cut(s)	113
BsaHI	GRCGYC	1 cut(s)	80
BsaJI	CCNNGG	2 cut(s)	44, 513
Bsc4I	CCNNNNNNNGG	2 cut(s)	46, 166
Bse118I	RCCGGY	1 cut(s)	128
Bse1I	ACTGG	1 cut(s)	349
Bse3DI	GCAATG	1 cut(s)	177
BseBI	CCWGG	1 cut(s)	148
BseDI	CCNNGG	2 cut(s)	44, 513
BseGI	GGATG	3 cut(s)	423, 541, 646
BseLI	CCNNNNNNNGG	2 cut(s)	46, 166
BseMI	GCAATG	1 cut(s)	177
BseNI	ACTGG	1 cut(s)	349
BseSI	GKGCMC	1 cut(s)	604
BseXI	GCAGC	1 cut(s)	121
BseYI	CCCAGC	1 cut(s)	103
BsgI	GTGCAG	2 cut(s)	383, 510
Bsh1236I	CGCG	1 cut(s)	46
BshFI	GGCC	3 cut(s)	39, 128, 396
BshNI	GGYRCC	1 cut(s)	79
BsiHKAI	GWGCWC	2 cut(s)	284, 604
BsiSI	CCGG	1 cut(s)	129
BslFI	GGGAC	3 cut(s)	62, 683, 693
BslI	CCNNNNNNNGG	2 cut(s)	46, 166
BsmFI	GGGAC	3 cut(s)	62, 683, 693
BsnI	GGCC	3 cut(s)	39, 128, 396
Bsp119I	TTCGAA	1 cut(s)	113
Bsp1286I	GDGCHC	2 cut(s)	284, 604
Bsp1407I	TGTACA	1 cut(s)	633
Bsp143I	GATC	4 cut(s)	143, 178, 463, 484
Bsp1720I	GCTNAGC	1 cut(s)	522
BspACI	CCGC	6 cut(s)	44, 46, 74, 95, 210, 533
BspANI	GGCC	3 cut(s)	39, 128, 396
BspFNI	CGCG	1 cut(s)	46
BspLI	GGNNCC	6 cut(s)	40, 81, 145, 180, 671, 672
BspOI	GCTAGC	1 cut(s)	561
BspPI	GGATC	4 cut(s)	138, 151, 173, 186
BspT104I	TTCGAA	1 cut(s)	113
BspT107I	GGYRCC	1 cut(s)	79
BspTI	CTTAAG	1 cut(s)	314
BsrDI	GCAATG	1 cut(s)	177
BsrFI	RCCGGY	1 cut(s)	128
BsrGI	TGTACA	1 cut(s)	633
BsrI	ACTGG	1 cut(s)	349
BssAI	RCCGGY	1 cut(s)	128
BssECI	CCNNGG	2 cut(s)	44, 513
BssMI	GATC	4 cut(s)	143, 178, 463, 484
BssNI	GRCGYC	1 cut(s)	80
BssSI	CACGAG	1 cut(s)	696
Bst2BI	CACGAG	1 cut(s)	696
Bst2UI	CCWGG	1 cut(s)	148
Bst4CI	ACNGT	4 cut(s)	27, 66, 187, 373
BstACI	GRCGYC	1 cut(s)	80
BstAFI	CTTAAG	1 cut(s)	314
BstAPI	GCANNNNNTGC	1 cut(s)	310
BstAUI	TGTACA	1 cut(s)	633
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	6 cut(s)	130, 398, 541, 559, 595, 693
BstDEI	CTNAG	3 cut(s)	350, 467, 522
BstDSI	CCRYGG	1 cut(s)	44
BstF5I	GGATG	3 cut(s)	423, 541, 646
BstFNI	CGCG	1 cut(s)	46
BstH2I	RGCGCY	2 cut(s)	83, 135
BstHHI	GCGC	3 cut(s)	82, 134, 159
BstKTI	GATC	4 cut(s)	146, 181, 466, 487
BstMBI	GATC	4 cut(s)	143, 178, 463, 484
BstMWI	GCNNNNNNNGC	4 cut(s)	134, 310, 518, 599
BstNI	CCWGG	1 cut(s)	148
BstNSI	RCATGY	2 cut(s)	381, 656
BstSCI	CCNGG	1 cut(s)	146
BstSFI	CTRYAG	1 cut(s)	574
BstSLI	GKGCMC	1 cut(s)	604
BstUI	CGCG	1 cut(s)	46
BstV1I	GCAGC	1 cut(s)	121
BstX2I	RGATCY	2 cut(s)	143, 178
BstYI	RGATCY	2 cut(s)	143, 178
BsuRI	GGCC	3 cut(s)	39, 128, 396
BtgI	CCRYGG	1 cut(s)	44
BtsCI	GGATG	3 cut(s)	423, 541, 646
BtsI	GCAGTG	1 cut(s)	647
BtsIMutI	CAGTG	2 cut(s)	369, 647
Cac8I	GCNNGC	6 cut(s)	130, 398, 541, 559, 595, 693
CfoI	GCGC	3 cut(s)	82, 134, 159
Cfr10I	RCCGGY	1 cut(s)	128
Cfr13I	GGNCC	4 cut(s)	38, 62, 583, 670
Cfr42I	CCGCGG	1 cut(s)	47
Csp6I	GTAC	1 cut(s)	634
CviAII	CATG	5 cut(s)	378, 403, 449, 637, 653
CviQI	GTAC	1 cut(s)	634
DdeI	CTNAG	3 cut(s)	350, 467, 522
DinI	GGCGCC	1 cut(s)	81
DpnI	GATC	4 cut(s)	145, 180, 465, 486
DpnII	GATC	4 cut(s)	143, 178, 463, 484
Eco147I	AGGCCT	1 cut(s)	396
Eco47I	GGWCC	3 cut(s)	62, 583, 670
EcoO109I	RGGNCCY	1 cut(s)	670
EcoRII	CCWGG	1 cut(s)	146
EgeI	GGCGCC	1 cut(s)	81
EheI	GGCGCC	1 cut(s)	81
FaeI	CATG	5 cut(s)	381, 406, 452, 640, 656
FaiI	YATR	9 cut(s)	276, 335, 337, 379, 404, 450, 500, 638, 654
FaqI	GGGAC	3 cut(s)	62, 683, 693
FatI	CATG	5 cut(s)	377, 402, 448, 636, 652
FauI	CCCGC	3 cut(s)	39, 51, 217
FauNDI	CATATG	1 cut(s)	335
Fnu4HI	GCNGC	2 cut(s)	96, 135
FokI	GGATG	3 cut(s)	410, 548, 653
Fsp4HI	GCNGC	2 cut(s)	96, 135
FspBI	CTAG	2 cut(s)	558, 724
GlaI	GCGC	3 cut(s)	81, 133, 158
GluI	GCNGC	2 cut(s)	96, 135
GsaI	CCCAGC	1 cut(s)	107
HaeII	RGCGCY	2 cut(s)	83, 135
HaeIII	GGCC	3 cut(s)	39, 128, 396
HapII	CCGG	1 cut(s)	129
HhaI	GCGC	3 cut(s)	82, 134, 159
Hin1I	GRCGYC	1 cut(s)	80
Hin1II	CATG	5 cut(s)	381, 406, 452, 640, 656
Hin6I	GCGC	3 cut(s)	80, 132, 157
HinP1I	GCGC	3 cut(s)	80, 132, 157
HincII	GTYRAC	1 cut(s)	243
HindII	GTYRAC	1 cut(s)	243
HindIII	AAGCTT	1 cut(s)	689
HinfI	GANTC	3 cut(s)	56, 388, 681
HpaII	CCGG	1 cut(s)	129
HphI	GGTGA	3 cut(s)	22, 409, 446
Hpy166II	GTNNAC	3 cut(s)	243, 602, 634
Hpy188I	TCNGA	1 cut(s)	183
Hpy188III	TCNNGA	4 cut(s)	60, 360, 461, 611
Hpy8I	GTNNAC	3 cut(s)	243, 602, 634
Hpy99I	CGWCG	2 cut(s)	31, 88
HpyAV	CCTTC	1 cut(s)	608
HpyCH4III	ACNGT	4 cut(s)	27, 66, 187, 373
HpyCH4V	TGCA	6 cut(s)	232, 400, 491, 602, 652, 695
HpyF10VI	GCNNNNNNNGC	4 cut(s)	134, 310, 518, 599
HpyF3I	CTNAG	3 cut(s)	350, 467, 522
Hsp92I	GRCGYC	1 cut(s)	80
Hsp92II	CATG	5 cut(s)	381, 406, 452, 640, 656
HspAI	GCGC	3 cut(s)	80, 132, 157
KasI	GGCGCC	1 cut(s)	79
KflI	GGGWCCC	1 cut(s)	670
KroI	GCCGGC	1 cut(s)	128
KroNI	GCCGGC	1 cut(s)	130
KspI	CCGCGG	1 cut(s)	47
Kzo9I	GATC	4 cut(s)	143, 178, 463, 484
Lsp1109I	GCAGC	1 cut(s)	121
LweI	GCATC	3 cut(s)	526, 552, 580
MaeI	CTAG	2 cut(s)	558, 724
MaeIII	GTNAC	1 cut(s)	434
MalI	GATC	4 cut(s)	145, 180, 465, 486
MboI	GATC	4 cut(s)	143, 178, 463, 484
MboII	GAAGA	3 cut(s)	127, 494, 516
MfeI	CAATTG	1 cut(s)	308
MflI	RGATCY	2 cut(s)	143, 178
MhlI	GDGCHC	2 cut(s)	284, 604
MluCI	AATT	4 cut(s)	226, 308, 507, 708
Mly113I	GGCGCC	1 cut(s)	80
MlyI	GAGTC	2 cut(s)	397, 675
MmeI	TCCRAC	1 cut(s)	206
MnlI	CCTC	5 cut(s)	169, 189, 401, 508, 622
MroNI	GCCGGC	1 cut(s)	128
MseI	TTAA	4 cut(s)	165, 315, 563, 711
MslI	CAYNNNNRTG	2 cut(s)	641, 657
MspA1I	CMGCKG	1 cut(s)	46
MspCI	CTTAAG	1 cut(s)	314
MspI	CCGG	1 cut(s)	129
MspR9I	CCNGG	1 cut(s)	148
MunI	CAATTG	1 cut(s)	308
MvaI	CCWGG	1 cut(s)	148
MvnI	CGCG	1 cut(s)	46
MwoI	GCNNNNNNNGC	4 cut(s)	134, 310, 518, 599
NaeI	GCCGGC	1 cut(s)	130
NarI	GGCGCC	1 cut(s)	80
NdeI	CATATG	1 cut(s)	335
NdeII	GATC	4 cut(s)	143, 178, 463, 484
NgoMIV	GCCGGC	1 cut(s)	128
NheI	GCTAGC	1 cut(s)	557
NlaIII	CATG	5 cut(s)	381, 406, 452, 640, 656
NlaIV	GGNNCC	6 cut(s)	40, 81, 145, 180, 671, 672
NmeAIII	GCCGAG	2 cut(s)	236, 538
NmuCI	GTSAC	1 cut(s)	434
NspI	RCATGY	2 cut(s)	381, 656
NspV	TTCGAA	1 cut(s)	113
PceI	AGGCCT	1 cut(s)	396
PdiI	GCCGGC	1 cut(s)	130
PfeI	GAWTC	1 cut(s)	56
PkrI	GCNGC	2 cut(s)	97, 136
PleI	GAGTC	2 cut(s)	396, 675
PluTI	GGCGCC	1 cut(s)	83
PpsI	GAGTC	2 cut(s)	396, 675
PpuMI	RGGWCCY	1 cut(s)	670
Psp5II	RGGWCCY	1 cut(s)	670
Psp6I	CCWGG	1 cut(s)	146
PspFI	CCCAGC	1 cut(s)	103
PspGI	CCWGG	1 cut(s)	146
PspN4I	GGNNCC	6 cut(s)	40, 81, 145, 180, 671, 672
PspPI	GGNCC	4 cut(s)	38, 62, 583, 670
PspPPI	RGGWCCY	1 cut(s)	670
PsuI	RGATCY	2 cut(s)	143, 178
RsaI	GTAC	1 cut(s)	635
RsaNI	GTAC	1 cut(s)	634
RseI	CAYNNNNRTG	2 cut(s)	641, 657
SacII	CCGCGG	1 cut(s)	47
SaqAI	TTAA	4 cut(s)	165, 315, 563, 711
SatI	GCNGC	2 cut(s)	96, 135
Sau3AI	GATC	4 cut(s)	143, 178, 463, 484
Sau96I	GGNCC	4 cut(s)	38, 62, 583, 670
SchI	GAGTC	2 cut(s)	397, 675
ScrFI	CCNGG	1 cut(s)	148
SduI	GDGCHC	2 cut(s)	284, 604
SfaNI	GCATC	3 cut(s)	526, 552, 580
SfcI	CTRYAG	1 cut(s)	574
SfoI	GGCGCC	1 cut(s)	81
Sfr303I	CCGCGG	1 cut(s)	47
SfuI	TTCGAA	1 cut(s)	113
SgrBI	CCGCGG	1 cut(s)	47
SinI	GGWCC	3 cut(s)	62, 583, 670
SmiMI	CAYNNNNRTG	2 cut(s)	641, 657
SmlI	CTYRAG	1 cut(s)	314
SmoI	CTYRAG	1 cut(s)	314
Sse9I	AATT	4 cut(s)	226, 308, 507, 708
SseBI	AGGCCT	1 cut(s)	396
SsiI	CCGC	6 cut(s)	44, 46, 74, 95, 210, 533
SspDI	GGCGCC	1 cut(s)	79
SspMI	CTAG	2 cut(s)	558, 724
StuI	AGGCCT	1 cut(s)	396
StyD4I	CCNGG	1 cut(s)	146
TaaI	ACNGT	4 cut(s)	27, 66, 187, 373
TaqI	TCGA	2 cut(s)	29, 113
TaqII	GACCGA	1 cut(s)	600
TasI	AATT	4 cut(s)	226, 308, 507, 708
TatI	WGTACW	1 cut(s)	633
TauI	GCSGC	1 cut(s)	98
TfiI	GAWTC	1 cut(s)	56
Tru1I	TTAA	4 cut(s)	165, 315, 563, 711
Tru9I	TTAA	4 cut(s)	165, 315, 563, 711
TscAI	CASTG	2 cut(s)	376, 654
TseFI	GTSAC	1 cut(s)	434
TseI	GCWGC	1 cut(s)	134
Tsp45I	GTSAC	1 cut(s)	434
TspDTI	ATGAA	1 cut(s)	134
TspRI	CASTG	2 cut(s)	376, 654
Vha464I	CTTAAG	1 cut(s)	314
VneI	GTGCAC	1 cut(s)	600
VpaK11BI	GGWCC	3 cut(s)	62, 583, 670
XapI	RAATTY	1 cut(s)	226
XceI	RCATGY	2 cut(s)	381, 656
XcmI	CCANNNNNNNNNTGG	1 cut(s)	169
XspI	CTAG	2 cut(s)	558, 724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.