Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0010698

Physical Location & Seq

Genomic Coordinates Reverse (-)

22664879 .. 22669519

Gene Structure 4641 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G221200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 855 bp

ATGAATGCGGTGGTGAAAGGACCGCGACCGTTGATTTGTGGCCCGCCGCGGGGCGCTGAATCTGGACCGTTGGCGGTGCCGTCGTTGTCGGGGGCGAAGCTAGGTTTTTTAAGGGTGAAGGGAAGCAATGCGATTGGATCCAGGTTTTTGAGACCGATTAAGGCAATGGAGGACTCTAGCGTTTCTCTGAGGAATGATTGCGCCGCCATTTCTGGTAGAAATCTGCGCCAGATGTCAACCATGGAGAATCCAACAAACATTGTGTGGCATAAAAGCCCAGTGGAGAAACTTGATAGGCAACATTTACTTCAGCAGAAAGGCTGTGTCATATGGATTACTGGTCTTAGTGGTTCAGGAAAAAGCACTGTGGCATGTGCTTTGAGTCAAGGCTTGCACATGAGAGGAAAGCTGACCTACATCCTTGATGGTGACAATGTTCGGCATGGTCTAAATCGTGATCTTAGTTTCAAAGCAGAAGATCGTGCAGAGAACATACGAAGAATTGCTGAGGTAGCTAGGCTCTTTGCGGATGCTGGCATCATTTGTATTGCTAGTTTAATATCTCCATACAGAAAGGACCGAGATGTCTGCCGTGCATTATTTCCTGAAGGGGATTTTATTGAGGTGTTCATGGACGTGCCACTCCATGTGTGTGAGAATAGGGACCCGAAGGGCCTTTACAAGCTTGCCCGAGCTGGAAAAATCAAAGGTTTTACAGGGGTTGATGATCCATATGAGCCACCATTAAATTGTGAGATAGTATTGCAGCAGAAAGGTAGGGACTGTGTCCCCCCAGGTGAGATGGCCGAAACCGTGATAGCATACTTGGAGGAGAAGGGGTATTTGCAGGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000103 GO:0003674 GO:0003824 GO:0004020 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006790 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00230 ko00920 ko01100 ko01120 map00230 map00920 map01100 map01120

Pfam Domains

Protein Families

APS_kinase

Protein Analysis

285

Amino Acids

31.11

Weight (kDa)

8.94

Isoelectric Point (pI)

37.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010698)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39940
fragaria_vesca	FvH4_1g17660 FvH4_1g17660
malus_domestica	MD02G1185400.v1.1 MD15G1297000.v1.1
prunus_persica	Prupe.6G221200_v2.0.a1
pyrus_communis	pycom02g15040 pycom02g15050 pycom15g26000
rosa_chinensis	RchiOBHm_Chr2g0107981
rosa_laevigata	RLG00000017631
rosa_multiflora	Rmu_sc0001484.1_g000028
rosa_roxburghii	Rroxscaffold_2G00135760
rosa_rugosa	Rorug02G0149200 Rorug02G0149300 Rorug02G0149300
rosa_samantha	Rh2BG211300 Rh2CG203100 Rh2DG206100
rosa_wichuraiana	Rw2G015750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	584
AccB1I	GGYRCC	1 cut(s)	76
AccII	CGCG	2 cut(s)	25, 49
AciI	CCGC	8 cut(s)	8, 23, 44, 47, 49, 74, 204, 527
AclWI	GGATC	3 cut(s)	132, 145, 722
AcoI	YGGCCR	1 cut(s)	804
AcuI	CTGAAG	2 cut(s)	293, 627
AfiI	CCNNNNNNNGG	2 cut(s)	49, 50
AgsI	TTSAA	1 cut(s)	469
AjiI	CACGTC	1 cut(s)	637
AjnI	CCWGG	2 cut(s)	140, 793
AluBI	AGCT	5 cut(s)	100, 409, 515, 685, 695
AluI	AGCT	5 cut(s)	100, 409, 515, 685, 695
Alw26I	GTCTC	1 cut(s)	145
AlwI	GGATC	3 cut(s)	132, 145, 722
Ama87I	CYCGRG	1 cut(s)	690
AoxI	GGCC	3 cut(s)	40, 673, 804
ApeKI	GCWGC	1 cut(s)	766
ArsI	GACNNNNNNTTYG	2 cut(s)	18, 50
AspLEI	GCGC	3 cut(s)	56, 203, 228
AspS9I	GGNCC	6 cut(s)	20, 41, 65, 577, 664, 673
AsuHPI	GGTGA	4 cut(s)	25, 127, 440, 809
AvaI	CYCGRG	1 cut(s)	690
AvaII	GGWCC	4 cut(s)	20, 65, 577, 664
BamHI	GGATCC	1 cut(s)	137
BanI	GGYRCC	1 cut(s)	76
BarI	GAAGNNNNNNTAC	2 cut(s)	662, 694
BbvCI	CCTCAGC	1 cut(s)	507
BbvI	GCAGC	1 cut(s)	778
BccI	CCATC	2 cut(s)	419, 796
BceAI	ACGGC	2 cut(s)	64, 576
BcgI	CGANNNNNNTGC	2 cut(s)	570, 604
BciT130I	CCWGG	2 cut(s)	142, 795
BcoDI	GTCTC	1 cut(s)	145
BfaI	CTAG	4 cut(s)	101, 177, 516, 552
BfoI	RGCGCY	1 cut(s)	57
BisI	GCNGC	3 cut(s)	47, 204, 767
BlsI	GCNGC	3 cut(s)	48, 205, 768
Bme1390I	CCNGG	2 cut(s)	142, 795
Bme18I	GGWCC	4 cut(s)	20, 65, 577, 664
BmeT110I	CYCGRG	1 cut(s)	690
BmgBI	CACGTC	1 cut(s)	637
BmgT120I	GGNCC	6 cut(s)	20, 41, 65, 577, 664, 673
BmiI	GGNNCC	4 cut(s)	78, 139, 665, 666
BmrFI	CCNGG	2 cut(s)	142, 795
BmrI	ACTGGG	1 cut(s)	272
BmsI	GCATC	2 cut(s)	520, 546
BmuI	ACTGGG	1 cut(s)	272
Bpu10I	CCTNAGC	1 cut(s)	507
BsaI	GGTCTC	1 cut(s)	145
BsaJI	CCNNGG	3 cut(s)	47, 240, 793
BsaXI	ACNNNNNCTCC	2 cut(s)	824, 854
Bsc4I	CCNNNNNNNGG	2 cut(s)	49, 50
Bse1I	ACTGG	2 cut(s)	278, 343
Bse3DI	GCAATG	2 cut(s)	133, 171
BseBI	CCWGG	2 cut(s)	142, 795
BseDI	CCNNGG	3 cut(s)	47, 240, 793
BseGI	GGATG	2 cut(s)	417, 535
BseLI	CCNNNNNNNGG	2 cut(s)	49, 50
BseMI	GCAATG	2 cut(s)	133, 171
BseMII	CTCAG	2 cut(s)	179, 498
BseNI	ACTGG	2 cut(s)	278, 343
BseRI	GAGGAG	1 cut(s)	845
BseXI	GCAGC	1 cut(s)	778
BsgI	GTGCAG	1 cut(s)	504
Bsh1236I	CGCG	2 cut(s)	25, 49
Bsh1285I	CGRYCG	1 cut(s)	29
BshFI	GGCC	3 cut(s)	42, 675, 806
BshNI	GGYRCC	1 cut(s)	76
BsiEI	CGRYCG	1 cut(s)	29
BsiHKCI	CYCGRG	1 cut(s)	690
BslFI	GGGAC	3 cut(s)	677, 773, 794
BslI	CCNNNNNNNGG	2 cut(s)	49, 50
BsmAI	GTCTC	1 cut(s)	145
BsmFI	GGGAC	3 cut(s)	677, 773, 794
BsmI	GAATGC	1 cut(s)	10
BsnI	GGCC	3 cut(s)	42, 675, 806
Bso31I	GGTCTC	1 cut(s)	145
BsoBI	CYCGRG	1 cut(s)	690
Bsp143I	GATC	4 cut(s)	137, 457, 478, 727
Bsp19I	CCATGG	1 cut(s)	240
BspACI	CCGC	8 cut(s)	8, 23, 44, 47, 49, 74, 204, 527
BspANI	GGCC	3 cut(s)	42, 675, 806
BspCNI	CTCAG	2 cut(s)	180, 499
BspFNI	CGCG	2 cut(s)	25, 49
BspLI	GGNNCC	4 cut(s)	78, 139, 665, 666
BspPI	GGATC	3 cut(s)	132, 145, 722
BspT107I	GGYRCC	1 cut(s)	76
BspTNI	GGTCTC	1 cut(s)	145
BsrDI	GCAATG	2 cut(s)	133, 171
BsrI	ACTGG	2 cut(s)	278, 343
BssECI	CCNNGG	3 cut(s)	47, 240, 793
BssMI	GATC	4 cut(s)	137, 457, 478, 727
BssT1I	CCWWGG	1 cut(s)	240
Bst2UI	CCWGG	2 cut(s)	142, 795
Bst4CI	ACNGT	5 cut(s)	30, 69, 367, 785, 814
BstC8I	GCNNGC	5 cut(s)	44, 392, 535, 687, 849
BstDEI	CTNAG	4 cut(s)	188, 344, 461, 507
BstDSI	CCRYGG	2 cut(s)	47, 240
BstF5I	GGATG	2 cut(s)	417, 535
BstFNI	CGCG	2 cut(s)	25, 49
BstH2I	RGCGCY	1 cut(s)	57
BstHHI	GCGC	3 cut(s)	56, 203, 228
BstKTI	GATC	4 cut(s)	140, 460, 481, 730
BstMAI	GTCTC	1 cut(s)	145
BstMBI	GATC	4 cut(s)	137, 457, 478, 727
BstMCI	CGRYCG	1 cut(s)	29
BstMWI	GCNNNNNNNGC	1 cut(s)	512
BstNI	CCWGG	2 cut(s)	142, 795
BstNSI	RCATGY	1 cut(s)	375
BstSCI	CCNGG	2 cut(s)	140, 793
BstUI	CGCG	2 cut(s)	25, 49
BstV1I	GCAGC	1 cut(s)	778
BstX2I	RGATCY	1 cut(s)	137
BstYI	RGATCY	1 cut(s)	137
BsuRI	GGCC	3 cut(s)	42, 675, 806
BtgI	CCRYGG	2 cut(s)	47, 240
BtrI	CACGTC	1 cut(s)	637
BtsCI	GGATG	2 cut(s)	417, 535
BtsIMutI	CAGTG	2 cut(s)	285, 363
Cac8I	GCNNGC	5 cut(s)	44, 392, 535, 687, 849
CfoI	GCGC	3 cut(s)	56, 203, 228
Cfr13I	GGNCC	6 cut(s)	20, 41, 65, 577, 664, 673
Cfr42I	CCGCGG	1 cut(s)	50
CviAII	CATG	6 cut(s)	241, 372, 397, 443, 631, 647
DdeI	CTNAG	4 cut(s)	188, 344, 461, 507
DpnI	GATC	4 cut(s)	139, 459, 480, 729
DpnII	GATC	4 cut(s)	137, 457, 478, 727
DrdI	GACNNNNNNGTC	1 cut(s)	584
DseDI	GACNNNNNNGTC	1 cut(s)	584
EaeI	YGGCCR	1 cut(s)	804
Eco130I	CCWWGG	1 cut(s)	240
Eco31I	GGTCTC	1 cut(s)	145
Eco47I	GGWCC	4 cut(s)	20, 65, 577, 664
Eco57I	CTGAAG	2 cut(s)	293, 627
Eco88I	CYCGRG	1 cut(s)	690
EcoO109I	RGGNCCY	2 cut(s)	664, 673
EcoRII	CCWGG	2 cut(s)	140, 793
EcoT14I	CCWWGG	1 cut(s)	240
ErhI	CCWWGG	1 cut(s)	240
FaeI	CATG	6 cut(s)	244, 375, 400, 446, 634, 650
FaqI	GGGAC	3 cut(s)	677, 773, 794
FatI	CATG	6 cut(s)	240, 371, 396, 442, 630, 646
FauI	CCCGC	2 cut(s)	42, 51
FauNDI	CATATG	2 cut(s)	329, 733
Fnu4HI	GCNGC	3 cut(s)	47, 204, 767
FokI	GGATG	2 cut(s)	404, 542
Fsp4HI	GCNGC	3 cut(s)	47, 204, 767
FspBI	CTAG	4 cut(s)	101, 177, 516, 552
GlaI	GCGC	3 cut(s)	55, 202, 227
GluI	GCNGC	3 cut(s)	47, 204, 767
HaeII	RGCGCY	1 cut(s)	57
HaeIII	GGCC	3 cut(s)	42, 675, 806
HhaI	GCGC	3 cut(s)	56, 203, 228
Hin1II	CATG	6 cut(s)	244, 375, 400, 446, 634, 650
Hin6I	GCGC	3 cut(s)	54, 201, 226
HinP1I	GCGC	3 cut(s)	54, 201, 226
HincII	GTYRAC	1 cut(s)	237
HindII	GTYRAC	1 cut(s)	237
HindIII	AAGCTT	1 cut(s)	683
HinfI	GANTC	4 cut(s)	59, 173, 247, 382
HphI	GGTGA	4 cut(s)	25, 127, 440, 809
Hpy166II	GTNNAC	1 cut(s)	237
Hpy188I	TCNGA	1 cut(s)	189
Hpy188III	TCNNGA	4 cut(s)	63, 354, 455, 605
Hpy8I	GTNNAC	1 cut(s)	237
Hpy99I	CGWCG	1 cut(s)	85
HpyAV	CCTTC	4 cut(s)	112, 602, 664, 829
HpyCH4III	ACNGT	5 cut(s)	30, 69, 367, 785, 814
HpyCH4IV	ACGT	1 cut(s)	636
HpyCH4V	TGCA	5 cut(s)	394, 485, 596, 766, 847
HpyF10VI	GCNNNNNNNGC	1 cut(s)	512
HpyF3I	CTNAG	4 cut(s)	188, 344, 461, 507
HpySE526I	ACGT	1 cut(s)	636
Hsp92II	CATG	6 cut(s)	244, 375, 400, 446, 634, 650
HspAI	GCGC	3 cut(s)	54, 201, 226
KflI	GGGWCCC	1 cut(s)	664
KspI	CCGCGG	1 cut(s)	50
Kzo9I	GATC	4 cut(s)	137, 457, 478, 727
Lsp1109I	GCAGC	1 cut(s)	778
LweI	GCATC	2 cut(s)	520, 546
MaeI	CTAG	4 cut(s)	101, 177, 516, 552
MaeII	ACGT	1 cut(s)	636
MaeIII	GTNAC	1 cut(s)	428
MalI	GATC	4 cut(s)	139, 459, 480, 729
MboI	GATC	4 cut(s)	137, 457, 478, 727
MboII	GAAGA	2 cut(s)	488, 510
MflI	RGATCY	1 cut(s)	137
MluCI	AATT	2 cut(s)	501, 748
MlyI	GAGTC	2 cut(s)	167, 391
MmeI	TCCRAC	1 cut(s)	275
MnlI	CCTC	6 cut(s)	163, 183, 395, 502, 616, 823
MseI	TTAA	4 cut(s)	110, 159, 557, 746
MslI	CAYNNNNRTG	2 cut(s)	635, 651
MspA1I	CMGCKG	1 cut(s)	49
MspR9I	CCNGG	2 cut(s)	142, 795
Mva1269I	GAATGC	1 cut(s)	10
MvaI	CCWGG	2 cut(s)	142, 795
MvnI	CGCG	2 cut(s)	25, 49
MwoI	GCNNNNNNNGC	1 cut(s)	512
NcoI	CCATGG	1 cut(s)	240
NdeI	CATATG	2 cut(s)	329, 733
NdeII	GATC	4 cut(s)	137, 457, 478, 727
NlaIII	CATG	6 cut(s)	244, 375, 400, 446, 634, 650
NlaIV	GGNNCC	4 cut(s)	78, 139, 665, 666
NmuCI	GTSAC	1 cut(s)	428
NspI	RCATGY	1 cut(s)	375
PctI	GAATGC	1 cut(s)	10
PfeI	GAWTC	2 cut(s)	59, 247
PflFI	GACNNNGTC	1 cut(s)	785
PkrI	GCNGC	3 cut(s)	48, 205, 768
PleI	GAGTC	2 cut(s)	167, 390
PpsI	GAGTC	2 cut(s)	167, 390
PpuMI	RGGWCCY	1 cut(s)	664
Psp5II	RGGWCCY	1 cut(s)	664
Psp6I	CCWGG	2 cut(s)	140, 793
PspGI	CCWGG	2 cut(s)	140, 793
PspN4I	GGNNCC	4 cut(s)	78, 139, 665, 666
PspPI	GGNCC	6 cut(s)	20, 41, 65, 577, 664, 673
PspPPI	RGGWCCY	1 cut(s)	664
PsuI	RGATCY	1 cut(s)	137
PsyI	GACNNNGTC	1 cut(s)	785
RseI	CAYNNNNRTG	2 cut(s)	635, 651
SacII	CCGCGG	1 cut(s)	50
SaqAI	TTAA	4 cut(s)	110, 159, 557, 746
SatI	GCNGC	3 cut(s)	47, 204, 767
Sau3AI	GATC	4 cut(s)	137, 457, 478, 727
Sau96I	GGNCC	6 cut(s)	20, 41, 65, 577, 664, 673
SchI	GAGTC	2 cut(s)	167, 391
ScrFI	CCNGG	2 cut(s)	142, 795
SfaNI	GCATC	2 cut(s)	520, 546
Sfr303I	CCGCGG	1 cut(s)	50
SgrBI	CCGCGG	1 cut(s)	50
SinI	GGWCC	4 cut(s)	20, 65, 577, 664
SmiMI	CAYNNNNRTG	2 cut(s)	635, 651
Sse9I	AATT	2 cut(s)	501, 748
SsiI	CCGC	8 cut(s)	8, 23, 44, 47, 49, 74, 204, 527
SspMI	CTAG	4 cut(s)	101, 177, 516, 552
StyD4I	CCNGG	2 cut(s)	140, 793
StyI	CCWWGG	1 cut(s)	240
TaaI	ACNGT	5 cut(s)	30, 69, 367, 785, 814
TaiI	ACGT	1 cut(s)	639
TaqII	GACCGA	2 cut(s)	169, 594
TasI	AATT	2 cut(s)	501, 748
TauI	GCSGC	2 cut(s)	49, 206
TfiI	GAWTC	2 cut(s)	59, 247
Tru1I	TTAA	4 cut(s)	110, 159, 557, 746
Tru9I	TTAA	4 cut(s)	110, 159, 557, 746
TscAI	CASTG	2 cut(s)	285, 370
TseFI	GTSAC	1 cut(s)	428
TseI	GCWGC	1 cut(s)	766
Tsp45I	GTSAC	1 cut(s)	428
TspDTI	ATGAA	2 cut(s)	17, 619
TspRI	CASTG	2 cut(s)	285, 370
Tth111I	GACNNNGTC	1 cut(s)	785
VpaK11BI	GGWCC	4 cut(s)	20, 65, 577, 664
XceI	RCATGY	1 cut(s)	375
XspI	CTAG	4 cut(s)	101, 177, 516, 552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.