MD02G1190100.v1.1
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0013008
Physical Location & Seq
Forward (+)
17502774 .. 17503616
843 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1190100.v1.1.491

Sequence Viewer

Length: 843 bp
ATGGGTTCTGCTCCTGCTAGAACTGCTTCTGCTTCTGCTTCTGCTGTGCTATTGATAACGCTGTTAAGCGTCGCCGTTTTCCGACCCACCACATCAGATCCGAGCGACGAGGCGTGCCTAACCCACCTGAGCGAATCCCTCCAAGACCCAACAAAATCCCTCCAGAACTGGACCAAATCCACCTTCGCCAACCCCTGCAGCGGCTTGAACTCCTACCTCCAGGGCGCCACCTGCAACAATGGTCGCATCTACAAGCTCTCCCTCACCAACCTCTCCCTCCGTGGCTCCATCTCCCCCTTCATCGCCAACTGCACCAACCTCCAGGCCCTTGACCTCTCCTCCAACTTCCTCGCCGGTCCCATCCCCTCCGACCTTCAGTACCTCGTCAACCTCGCCGTTCTCAACCTCTCCTCCAACCAATTATCCGGTCCCATTCCGCCGCAGCTCACATTGTGCGCCTACCTCAACGTCATCGACCTCCACGACAACTCCCTCACCGGCCCCATTCCTCAGCAATTGGGCCTCCTCGTCCGCCTCTCTGCCTTCGACGTCTCCAACAACAAGCTTGCTGGCCCGATTCCGGTCTCGCTGGGAAATCGGAGCGGGAACTTGCCGAGATTCAATGCGACGTCGTTCCAGGGGAACAAGGAGCTTTATGGGTACCCTTTGCCGCCGCTGAAAAGCAAAGGGCTTTCGGTTCTGTCGATCGTCGGGATCGGATTAGGAAGTGGGTTCGCGAGCTTGGTGCTCAGCTTTACCGGCGTCTGCATTTGGTTGAAAATTACAGAGCGGAAGATGGCGCTGGAAGAAGGGAAGATCAGCCACCTCATGCCTGATTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8

Protein Analysis

281

Amino Acids

29.69

Weight (kDa)

8.52

Isoelectric Point (pI)

33.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013008)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49750 AT3G49750 AT5G65830
fragaria_vesca FvH4_1g18280
malus_domestica MD02G1190100.v1.1 MD15G1301200.v1.1
prunus_persica Prupe.6G216300_v2.0.a1
pyrus_communis pycom15g26380
rosa_chinensis RchiOBHm_Chr2g0108871
rosa_laevigata RLG00000017693
rosa_multiflora Rmu_sc0004830.1_g000001
rosa_roxburghii Rroxscaffold_2G00134760
rosa_rugosa Rorug02G0156500
rosa_samantha Rh2AG206900 Rh2BG218100 Rh2CG210100 Rh2DG213200
rosa_wichuraiana Rw2G016440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 239
AatII GACGTC 2 cut(s) 552, 632
Acc36I ACCTGC 1 cut(s) 239
Acc65I GGTACC 1 cut(s) 660
AccB1I GGYRCC 2 cut(s) 224, 660
AccBSI CCGCTC 2 cut(s) 603, 790
AccII CGCG 1 cut(s) 737
AciI CCGC 8 cut(s) 201, 437, 440, 532, 603, 671, 674, 790
AclWI GGATC 2 cut(s) 92, 722
AcuI CTGAAG 1 cut(s) 359
AcyI GRCGYC 4 cut(s) 225, 549, 629, 762
AdeI CACNNNGTG 1 cut(s) 453
AfaI GTAC 2 cut(s) 380, 662
AfiI CCNNNNNNNGG 2 cut(s) 200, 580
AgsI TTSAA 3 cut(s) 208, 622, 778
AjnI CCWGG 3 cut(s) 219, 321, 636
AjuI GAANNNNNNNTTGG 2 cut(s) 167, 199
AluBI AGCT 6 cut(s) 256, 445, 565, 652, 741, 753
AluI AGCT 6 cut(s) 256, 445, 565, 652, 741, 753
Alw21I GWGCWC 1 cut(s) 750
Alw26I GTCTC 2 cut(s) 556, 589
AlwI GGATC 2 cut(s) 92, 722
AoxI GGCC 4 cut(s) 324, 499, 520, 571
ApeKI GCWGC 2 cut(s) 198, 442
Asp700I GAANNNNTTC 1 cut(s) 25
Asp718I GGTACC 1 cut(s) 660
AspLEI GCGC 3 cut(s) 227, 458, 802
AspS9I GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
AsuHPI GGTGA 2 cut(s) 256, 487
AvaII GGWCC 3 cut(s) 171, 356, 428
BanI GGYRCC 2 cut(s) 224, 660
Bbv12I GWGCWC 1 cut(s) 750
BbvCI CCTCAGC 1 cut(s) 510
BbvI GCAGC 2 cut(s) 210, 454
BccI CCATC 3 cut(s) 296, 368, 790
BceAI ACGGC 2 cut(s) 59, 380
BcgI CGANNNNNNTGC 2 cut(s) 727, 761
BciT130I CCWGG 3 cut(s) 221, 323, 638
BcoDI GTCTC 2 cut(s) 556, 589
BfaI CTAG 1 cut(s) 18
BfmI CTRYAG 1 cut(s) 196
BfoI RGCGCY 2 cut(s) 228, 803
BfuAI ACCTGC 1 cut(s) 239
BisI GCNGC 6 cut(s) 199, 202, 440, 443, 671, 674
BlpI GCTNAGC 1 cut(s) 749
BlsI GCNGC 6 cut(s) 200, 203, 441, 444, 672, 675
Bme1390I CCNGG 3 cut(s) 221, 323, 638
Bme18I GGWCC 3 cut(s) 171, 356, 428
BmgT120I GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
BmiI GGNNCC 6 cut(s) 226, 286, 358, 430, 502, 662
BmrFI CCNGG 3 cut(s) 221, 323, 638
BmsI GCATC 1 cut(s) 255
BpmI CTGGAG 3 cut(s) 146, 203, 305
Bpu10I CCTNAGC 2 cut(s) 128, 510
Bpu1102I GCTNAGC 1 cut(s) 749
BsaHI GRCGYC 4 cut(s) 225, 549, 629, 762
BsaI GGTCTC 1 cut(s) 589
BsaJI CCNNGG 3 cut(s) 220, 280, 637
BsaWI WCCGGW 2 cut(s) 425, 580
BsaXI ACNNNNNCTCC 8 cut(s) 242, 272, 323, 353, 395, 425, 473, 503
Bsc4I CCNNNNNNNGG 2 cut(s) 200, 580
Bse118I RCCGGY 3 cut(s) 353, 497, 758
Bse1I ACTGG 1 cut(s) 173
BseBI CCWGG 3 cut(s) 221, 323, 638
BseDI CCNNGG 3 cut(s) 220, 280, 637
BseGI GGATG 1 cut(s) 360
BseLI CCNNNNNNNGG 2 cut(s) 200, 580
BseMII CTCAG 3 cut(s) 119, 524, 763
BseNI ACTGG 1 cut(s) 173
BseRI GAGGAG 3 cut(s) 328, 400, 515
BseXI GCAGC 2 cut(s) 210, 454
BseYI CCCAGC 1 cut(s) 589
BsgI GTGCAG 1 cut(s) 295
Bsh1236I CGCG 1 cut(s) 737
Bsh1285I CGRYCG 1 cut(s) 708
BshFI GGCC 4 cut(s) 326, 501, 522, 573
BshNI GGYRCC 2 cut(s) 224, 660
BsiEI CGRYCG 1 cut(s) 708
BsiHKAI GWGCWC 1 cut(s) 750
BsiSI CCGG 5 cut(s) 354, 426, 498, 581, 759
BslFI GGGAC 2 cut(s) 342, 414
BslI CCNNNNNNNGG 2 cut(s) 200, 580
BsmAI GTCTC 2 cut(s) 556, 589
BsmBI CGTCTC 1 cut(s) 556
BsmFI GGGAC 2 cut(s) 342, 414
BsnI GGCC 4 cut(s) 326, 501, 522, 573
Bso31I GGTCTC 1 cut(s) 589
Bsp1286I GDGCHC 1 cut(s) 750
Bsp143I GATC 4 cut(s) 97, 705, 714, 816
Bsp1720I GCTNAGC 1 cut(s) 749
Bsp68I TCGCGA 1 cut(s) 737
BspACI CCGC 8 cut(s) 201, 437, 440, 532, 603, 671, 674, 790
BspANI GGCC 4 cut(s) 326, 501, 522, 573
BspCNI CTCAG 3 cut(s) 120, 523, 762
BspFNI CGCG 1 cut(s) 737
BspLI GGNNCC 6 cut(s) 226, 286, 358, 430, 502, 662
BspMAI CTGCAG 1 cut(s) 200
BspMI ACCTGC 1 cut(s) 239
BspPI GGATC 2 cut(s) 92, 722
BspT107I GGYRCC 2 cut(s) 224, 660
BspTNI GGTCTC 1 cut(s) 589
BsrBI CCGCTC 2 cut(s) 603, 790
BsrFI RCCGGY 3 cut(s) 353, 497, 758
BsrI ACTGG 1 cut(s) 173
BssAI RCCGGY 3 cut(s) 353, 497, 758
BssECI CCNNGG 3 cut(s) 220, 280, 637
BssMI GATC 4 cut(s) 97, 705, 714, 816
BssNI GRCGYC 4 cut(s) 225, 549, 629, 762
Bst2UI CCWGG 3 cut(s) 221, 323, 638
BstACI GRCGYC 4 cut(s) 225, 549, 629, 762
BstC8I GCNNGC 4 cut(s) 115, 567, 571, 739
BstDEI CTNAG 3 cut(s) 128, 510, 749
BstDSI CCRYGG 1 cut(s) 280
BstF5I GGATG 1 cut(s) 360
BstFNI CGCG 1 cut(s) 737
BstH2I RGCGCY 2 cut(s) 228, 803
BstHHI GCGC 3 cut(s) 227, 458, 802
BstKTI GATC 4 cut(s) 100, 708, 717, 819
BstMAI GTCTC 2 cut(s) 556, 589
BstMBI GATC 4 cut(s) 97, 705, 714, 816
BstMCI CGRYCG 1 cut(s) 708
BstMWI GCNNNNNNNGC 3 cut(s) 23, 231, 759
BstNI CCWGG 3 cut(s) 221, 323, 638
BstSCI CCNGG 3 cut(s) 219, 321, 636
BstSFI CTRYAG 1 cut(s) 196
BstUI CGCG 1 cut(s) 737
BstV1I GCAGC 2 cut(s) 210, 454
BstX2I RGATCY 1 cut(s) 97
BstYI RGATCY 1 cut(s) 97
BsuRI GGCC 4 cut(s) 326, 501, 522, 573
BtgI CCRYGG 1 cut(s) 280
BtgZI GCGATG 1 cut(s) 286
BtsCI GGATG 1 cut(s) 360
BtuMI TCGCGA 1 cut(s) 737
BveI ACCTGC 1 cut(s) 239
Cac8I GCNNGC 4 cut(s) 115, 567, 571, 739
CfoI GCGC 3 cut(s) 227, 458, 802
Cfr10I RCCGGY 3 cut(s) 353, 497, 758
Cfr13I GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
CseI GACGC 2 cut(s) 58, 751
Csp6I GTAC 2 cut(s) 379, 661
CviAII CATG 1 cut(s) 829
CviQI GTAC 2 cut(s) 379, 661
DdeI CTNAG 3 cut(s) 128, 510, 749
DinI GGCGCC 1 cut(s) 226
DpnI GATC 4 cut(s) 99, 707, 716, 818
DpnII GATC 4 cut(s) 97, 705, 714, 816
DraIII CACNNNGTG 1 cut(s) 453
EciI GGCGGA 2 cut(s) 426, 521
Eco31I GGTCTC 1 cut(s) 589
Eco47I GGWCC 3 cut(s) 171, 356, 428
Eco57I CTGAAG 1 cut(s) 359
EcoO109I RGGNCCY 1 cut(s) 325
EcoRII CCWGG 3 cut(s) 219, 321, 636
EgeI GGCGCC 1 cut(s) 226
EheI GGCGCC 1 cut(s) 226
Esp3I CGTCTC 1 cut(s) 556
FaeI CATG 1 cut(s) 832
FaiI YATR 2 cut(s) 657, 830
FaqI GGGAC 2 cut(s) 342, 414
FatI CATG 1 cut(s) 828
FauI CCCGC 1 cut(s) 596
Fnu4HI GCNGC 6 cut(s) 199, 202, 440, 443, 671, 674
FokI GGATG 1 cut(s) 347
Fsp4HI GCNGC 6 cut(s) 199, 202, 440, 443, 671, 674
FspBI CTAG 1 cut(s) 18
GlaI GCGC 3 cut(s) 226, 457, 801
GluI GCNGC 6 cut(s) 199, 202, 440, 443, 671, 674
GsaI CCCAGC 1 cut(s) 593
GsuI CTGGAG 3 cut(s) 146, 203, 305
HaeII RGCGCY 2 cut(s) 228, 803
HaeIII GGCC 4 cut(s) 326, 501, 522, 573
HapII CCGG 5 cut(s) 354, 426, 498, 581, 759
HgaI GACGC 2 cut(s) 58, 751
HhaI GCGC 3 cut(s) 227, 458, 802
Hin1I GRCGYC 4 cut(s) 225, 549, 629, 762
Hin1II CATG 1 cut(s) 832
Hin6I GCGC 3 cut(s) 225, 456, 800
HinP1I GCGC 3 cut(s) 225, 456, 800
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HindIII AAGCTT 1 cut(s) 563
HinfI GANTC 3 cut(s) 134, 577, 618
HpaII CCGG 5 cut(s) 354, 426, 498, 581, 759
HphI GGTGA 2 cut(s) 256, 487
Hpy166II GTNNAC 1 cut(s) 388
Hpy188I TCNGA 6 cut(s) 83, 97, 102, 370, 600, 719
Hpy188III TCNNGA 3 cut(s) 163, 712, 736
Hpy8I GTNNAC 1 cut(s) 388
Hpy99I CGWCG 6 cut(s) 74, 110, 551, 631, 634, 713
HpyAV CCTTC 5 cut(s) 193, 307, 383, 553, 803
HpyCH4IV ACGT 3 cut(s) 468, 549, 629
HpyCH4V TGCA 4 cut(s) 198, 234, 312, 768
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 231, 759
HpyF3I CTNAG 3 cut(s) 128, 510, 749
HpySE526I ACGT 3 cut(s) 468, 549, 629
Hsp92I GRCGYC 4 cut(s) 225, 549, 629, 762
Hsp92II CATG 1 cut(s) 832
HspAI GCGC 3 cut(s) 225, 456, 800
KasI GGCGCC 1 cut(s) 224
KpnI GGTACC 1 cut(s) 664
Kzo9I GATC 4 cut(s) 97, 705, 714, 816
LmnI GCTCC 4 cut(s) 16, 290, 600, 649
Lsp1109I GCAGC 2 cut(s) 210, 454
LweI GCATC 1 cut(s) 255
MaeI CTAG 1 cut(s) 18
MaeII ACGT 3 cut(s) 468, 549, 629
MalI GATC 4 cut(s) 99, 707, 716, 818
MbiI CCGCTC 2 cut(s) 603, 790
MboI GATC 4 cut(s) 97, 705, 714, 816
MboII GAAGA 3 cut(s) 805, 818, 826
MfeI CAATTG 1 cut(s) 515
MflI RGATCY 1 cut(s) 97
MhlI GDGCHC 1 cut(s) 750
MluCI AATT 3 cut(s) 419, 515, 780
Mly113I GGCGCC 1 cut(s) 225
MmeI TCCRAC 5 cut(s) 106, 366, 393, 438, 579
MroXI GAANNNNTTC 1 cut(s) 25
MseI TTAA 1 cut(s) 65
MspA1I CMGCKG 2 cut(s) 201, 676
MspI CCGG 5 cut(s) 354, 426, 498, 581, 759
MspR9I CCNGG 3 cut(s) 221, 323, 638
MunI CAATTG 1 cut(s) 515
MvaI CCWGG 3 cut(s) 221, 323, 638
MvnI CGCG 1 cut(s) 737
MwoI GCNNNNNNNGC 3 cut(s) 23, 231, 759
NarI GGCGCC 1 cut(s) 225
NdeII GATC 4 cut(s) 97, 705, 714, 816
NlaIII CATG 1 cut(s) 832
NlaIV GGNNCC 6 cut(s) 226, 286, 358, 430, 502, 662
NmeAIII GCCGAG 1 cut(s) 639
NruI TCGCGA 1 cut(s) 737
PaqCI CACCTGC 1 cut(s) 239
PcsI WCGNNNNNNNCGW 2 cut(s) 480, 701
PdmI GAANNNNTTC 1 cut(s) 25
PfeI GAWTC 3 cut(s) 134, 577, 618
PkrI GCNGC 6 cut(s) 200, 203, 441, 444, 672, 675
Ple19I CGATCG 1 cut(s) 708
PluTI GGCGCC 1 cut(s) 228
Psp6I CCWGG 3 cut(s) 219, 321, 636
PspFI CCCAGC 1 cut(s) 589
PspGI CCWGG 3 cut(s) 219, 321, 636
PspN4I GGNNCC 6 cut(s) 226, 286, 358, 430, 502, 662
PspPI GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
PstI CTGCAG 1 cut(s) 200
PsuI RGATCY 1 cut(s) 97
PvuI CGATCG 1 cut(s) 708
RruI TCGCGA 1 cut(s) 737
RsaI GTAC 2 cut(s) 380, 662
RsaNI GTAC 2 cut(s) 379, 661
SaqAI TTAA 1 cut(s) 65
SatI GCNGC 6 cut(s) 199, 202, 440, 443, 671, 674
Sau3AI GATC 4 cut(s) 97, 705, 714, 816
Sau96I GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
ScrFI CCNGG 3 cut(s) 221, 323, 638
SduI GDGCHC 1 cut(s) 750
SfaNI GCATC 1 cut(s) 255
SfcI CTRYAG 1 cut(s) 196
SfoI GGCGCC 1 cut(s) 226
SinI GGWCC 3 cut(s) 171, 356, 428
Sse9I AATT 3 cut(s) 419, 515, 780
SsiI CCGC 8 cut(s) 201, 437, 440, 532, 603, 671, 674, 790
SspDI GGCGCC 1 cut(s) 224
SspMI CTAG 1 cut(s) 18
StyD4I CCNGG 3 cut(s) 219, 321, 636
TaiI ACGT 3 cut(s) 471, 552, 632
TaqI TCGA 3 cut(s) 474, 546, 704
TasI AATT 3 cut(s) 419, 515, 780
TauI GCSGC 4 cut(s) 204, 442, 673, 676
TfiI GAWTC 3 cut(s) 134, 577, 618
Tru1I TTAA 1 cut(s) 65
Tru9I TTAA 1 cut(s) 65
TseI GCWGC 2 cut(s) 198, 442
TspDTI ATGAA 1 cut(s) 289
TspGWI ACGGA 1 cut(s) 269
VpaK11BI GGWCC 3 cut(s) 171, 356, 428
XmnI GAANNNNTTC 1 cut(s) 25
XspI CTAG 1 cut(s) 18
ZraI GACGTC 2 cut(s) 550, 630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.