Rh2AG206900
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0013008
Physical Location & Seq
Forward (+)
21014478 .. 21016042
1565 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG206900.1

Sequence Viewer

Length: 864 bp
ATGGGTGGTGGTTGTGGTTGGAGAAGTAGTAGTAGTAGTAGTAGTAATAGTTTCTGTCATGTCTTTCTTCTAGTTGTGACTCTGTTTTGCGGCGCGGTTTTCCGGCAGAGCCTATCAGATCCGAGCGACGAGGCATGTCTAACCCACCTGAGCCAATCCCTCCAAGACCCGAACCACTCGTTACAGAACTGGACCAAATCCACCTTCGCCAACCCATGTAGCGGCTTCACCTCTTATCTCCAAGGCGCCACCTGCAACAATGGCCGAATCTACAAGCTCTCTCTCACCAACCTCTCTCTGCGCGGCTCCATCACACCTTTTCTCGCCAATTGCACCAATCTCCAGTCCCTCGATTTGTCTTCGAACTTCATCGCTGGCCCAATCCCGCCTGAGCTACAGTCCCTGGTTAACCTCGCCGTCCTTAACCTCTCGTCGAACAGGTTATCCGGCCCGATTCCGCCGCAGCTCACATTGTGTGCTTACCTCAACGTCATCGACCTCCACCAGAACCTTCTCACCGGCACGATTCCCCAGCAGCTGGGTCTGCTCGTGAGGCTCTCGGCGTTTGACGTCAGCAACAACAAGCTTTCGGGTCCGATTCCGAGTTCTCTTGGCAACCGGAGCGGGAGCCTGCCGAGATTCAATGCGACGTCGTTTGCCGGGAACAAGGACCTTTATGGGTACCCTTTGCCGCCTATGAAAACCAAAGGGCTTTCGGTTCTGGCCATTGTTGGGATCGGATTGGGGAGTGGGTTAGCGAGCTTGGTGCTTAGCTTCACTGGGGTTTGTATATGGCTGAAAATCACAGAAAGGAAGATGGCTCTTGAAGAAGGCAAGATCACCCAGCTCATGCCTGATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8

Protein Analysis

287

Amino Acids

30.63

Weight (kDa)

8.75

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013008)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49750 AT3G49750 AT5G65830
fragaria_vesca FvH4_1g18280
malus_domestica MD02G1190100.v1.1 MD15G1301200.v1.1
prunus_persica Prupe.6G216300_v2.0.a1
pyrus_communis pycom15g26380
rosa_chinensis RchiOBHm_Chr2g0108871
rosa_laevigata RLG00000017693
rosa_multiflora Rmu_sc0004830.1_g000001
rosa_roxburghii Rroxscaffold_2G00134760
rosa_rugosa Rorug02G0156500
rosa_samantha Rh2AG206900 Rh2BG218100 Rh2CG210100 Rh2DG213200
rosa_wichuraiana Rw2G016440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 260
AatII GACGTC 2 cut(s) 573, 653
Acc36I ACCTGC 1 cut(s) 260
Acc65I GGTACC 1 cut(s) 681
AccB1I GGYRCC 2 cut(s) 245, 681
AccB7I CCANNNNNTGG 1 cut(s) 538
AccBSI CCGCTC 1 cut(s) 624
AccII CGCG 2 cut(s) 95, 303
AciI CCGC 9 cut(s) 90, 95, 222, 303, 386, 458, 461, 624, 692
AclWI GGATC 2 cut(s) 113, 743
AcoI YGGCCR 2 cut(s) 262, 723
AcyI GRCGYC 3 cut(s) 246, 570, 650
AdeI CACNNNGTG 1 cut(s) 474
AfaI GTAC 1 cut(s) 683
AfiI CCNNNNNNNGG 3 cut(s) 221, 538, 732
AgsI TTSAA 2 cut(s) 643, 827
AjnI CCWGG 1 cut(s) 402
AjuI GAANNNNNNNTTGG 2 cut(s) 188, 220
AloI GAACNNNNNNTCC 2 cut(s) 428, 460
AluBI AGCT 8 cut(s) 277, 394, 466, 538, 586, 762, 774, 847
AluI AGCT 8 cut(s) 277, 394, 466, 538, 586, 762, 774, 847
AlwI GGATC 2 cut(s) 113, 743
AlwNI CAGNNNCTG 2 cut(s) 403, 538
AoxI GGCC 4 cut(s) 262, 376, 448, 723
ApeKI GCWGC 2 cut(s) 463, 535
Asp718I GGTACC 1 cut(s) 681
AspLEI GCGC 3 cut(s) 95, 248, 303
AspS9I GGNCC 5 cut(s) 192, 377, 449, 593, 670
AsuC2I CCSGG 1 cut(s) 661
AsuHPI GGTGA 4 cut(s) 220, 277, 508, 832
AsuII TTCGAA 1 cut(s) 362
AvaII GGWCC 3 cut(s) 192, 593, 670
BalI TGGCCA 1 cut(s) 725
BanI GGYRCC 2 cut(s) 245, 681
BauI CACGAG 1 cut(s) 548
BbsI GAAGAC 1 cut(s) 351
BbvI GCAGC 2 cut(s) 475, 547
BccI CCATC 2 cut(s) 317, 811
BceAI ACGGC 1 cut(s) 401
BcgI CGANNNNNNTGC 2 cut(s) 748, 782
BciT130I CCWGG 1 cut(s) 404
BcnI CCSGG 1 cut(s) 661
BfaI CTAG 1 cut(s) 71
BfmI CTRYAG 1 cut(s) 395
BfoI RGCGCY 1 cut(s) 249
BfuAI ACCTGC 1 cut(s) 260
BisI GCNGC 7 cut(s) 91, 223, 304, 461, 464, 536, 692
BlpI GCTNAGC 1 cut(s) 770
BlsI GCNGC 7 cut(s) 92, 224, 305, 462, 465, 537, 693
Bme1390I CCNGG 2 cut(s) 404, 661
Bme18I GGWCC 3 cut(s) 192, 593, 670
BmgT120I GGNCC 5 cut(s) 192, 377, 449, 593, 670
BmiI GGNNCC 5 cut(s) 247, 307, 594, 629, 683
BmrFI CCNGG 2 cut(s) 404, 661
BmrI ACTGGG 1 cut(s) 789
BmuI ACTGGG 1 cut(s) 789
BpiI GAAGAC 1 cut(s) 351
BpmI CTGGAG 1 cut(s) 326
Bpu10I CCTNAGC 2 cut(s) 149, 390
Bpu1102I GCTNAGC 1 cut(s) 770
Bpu14I TTCGAA 1 cut(s) 362
BpuMI CCSGG 1 cut(s) 661
BsaHI GRCGYC 3 cut(s) 246, 570, 650
BsaJI CCNNGG 2 cut(s) 241, 402
BsaWI WCCGGW 1 cut(s) 618
BsaXI ACNNNNNCTCC 2 cut(s) 13, 43
Bsc4I CCNNNNNNNGG 3 cut(s) 221, 538, 732
Bse118I RCCGGY 1 cut(s) 518
Bse1I ACTGG 3 cut(s) 194, 343, 784
BseBI CCWGG 1 cut(s) 404
BseDI CCNNGG 2 cut(s) 241, 402
BseLI CCNNNNNNNGG 3 cut(s) 221, 538, 732
BseMII CTCAG 2 cut(s) 140, 381
BseNI ACTGG 3 cut(s) 194, 343, 784
BseXI GCAGC 2 cut(s) 475, 547
BseYI CCCAGC 3 cut(s) 531, 538, 843
Bsh1236I CGCG 2 cut(s) 95, 303
BshFI GGCC 4 cut(s) 264, 378, 450, 725
BshNI GGYRCC 2 cut(s) 245, 681
BsiSI CCGG 5 cut(s) 103, 447, 519, 619, 660
BslFI GGGAC 2 cut(s) 331, 385
BslI CCNNNNNNNGG 3 cut(s) 221, 538, 732
BsmFI GGGAC 2 cut(s) 331, 385
BsnI GGCC 4 cut(s) 264, 378, 450, 725
Bsp119I TTCGAA 1 cut(s) 362
Bsp143I GATC 3 cut(s) 118, 735, 837
Bsp1720I GCTNAGC 1 cut(s) 770
BspACI CCGC 9 cut(s) 90, 95, 222, 303, 386, 458, 461, 624, 692
BspANI GGCC 4 cut(s) 264, 378, 450, 725
BspCNI CTCAG 2 cut(s) 141, 382
BspFNI CGCG 2 cut(s) 95, 303
BspLI GGNNCC 5 cut(s) 247, 307, 594, 629, 683
BspMI ACCTGC 1 cut(s) 260
BspPI GGATC 2 cut(s) 113, 743
BspT104I TTCGAA 1 cut(s) 362
BspT107I GGYRCC 2 cut(s) 245, 681
BsrBI CCGCTC 1 cut(s) 624
BsrFI RCCGGY 1 cut(s) 518
BsrI ACTGG 3 cut(s) 194, 343, 784
BssAI RCCGGY 1 cut(s) 518
BssECI CCNNGG 2 cut(s) 241, 402
BssMI GATC 3 cut(s) 118, 735, 837
BssNI GRCGYC 3 cut(s) 246, 570, 650
BssSI CACGAG 1 cut(s) 548
BssT1I CCWWGG 1 cut(s) 241
Bst2BI CACGAG 1 cut(s) 548
Bst2UI CCWGG 1 cut(s) 404
Bst4CI ACNGT 1 cut(s) 399
BstACI GRCGYC 3 cut(s) 246, 570, 650
BstBI TTCGAA 1 cut(s) 362
BstC8I GCNNGC 3 cut(s) 376, 632, 760
BstDEI CTNAG 3 cut(s) 149, 390, 770
BstFNI CGCG 2 cut(s) 95, 303
BstH2I RGCGCY 1 cut(s) 249
BstHHI GCGC 3 cut(s) 95, 248, 303
BstKTI GATC 3 cut(s) 121, 738, 840
BstMBI GATC 3 cut(s) 118, 735, 837
BstMWI GCNNNNNNNGC 5 cut(s) 252, 261, 544, 553, 621
BstNI CCWGG 1 cut(s) 404
BstNSI RCATGY 1 cut(s) 138
BstSCI CCNGG 2 cut(s) 402, 659
BstSFI CTRYAG 1 cut(s) 395
BstUI CGCG 2 cut(s) 95, 303
BstV1I GCAGC 2 cut(s) 475, 547
BstV2I GAAGAC 1 cut(s) 351
BstX2I RGATCY 1 cut(s) 118
BstYI RGATCY 1 cut(s) 118
BsuRI GGCC 4 cut(s) 264, 378, 450, 725
BtgZI GCGATG 1 cut(s) 355
BtsIMutI CAGTG 1 cut(s) 777
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 3 cut(s) 376, 632, 760
CaiI CAGNNNCTG 2 cut(s) 403, 538
CfoI GCGC 3 cut(s) 95, 248, 303
Cfr10I RCCGGY 1 cut(s) 518
Cfr13I GGNCC 5 cut(s) 192, 377, 449, 593, 670
Csp6I GTAC 1 cut(s) 682
CviAII CATG 4 cut(s) 59, 135, 216, 850
CviQI GTAC 1 cut(s) 682
DdeI CTNAG 3 cut(s) 149, 390, 770
DinI GGCGCC 1 cut(s) 247
DpnI GATC 3 cut(s) 120, 737, 839
DpnII GATC 3 cut(s) 118, 735, 837
DraIII CACNNNGTG 1 cut(s) 474
EaeI YGGCCR 2 cut(s) 262, 723
EciI GGCGGA 1 cut(s) 447
Eco130I CCWWGG 1 cut(s) 241
Eco47I GGWCC 3 cut(s) 192, 593, 670
EcoO109I RGGNCCY 1 cut(s) 670
EcoRII CCWGG 1 cut(s) 402
EcoT14I CCWWGG 1 cut(s) 241
EgeI GGCGCC 1 cut(s) 247
EheI GGCGCC 1 cut(s) 247
ErhI CCWWGG 1 cut(s) 241
FaeI CATG 4 cut(s) 62, 138, 219, 853
FaiI YATR 8 cut(s) 60, 136, 217, 678, 698, 791, 793, 851
FaqI GGGAC 2 cut(s) 331, 385
FatI CATG 4 cut(s) 58, 134, 215, 849
FauI CCCGC 2 cut(s) 393, 617
Fnu4HI GCNGC 7 cut(s) 91, 223, 304, 461, 464, 536, 692
Fsp4HI GCNGC 7 cut(s) 91, 223, 304, 461, 464, 536, 692
FspBI CTAG 1 cut(s) 71
GlaI GCGC 3 cut(s) 94, 247, 302
GluI GCNGC 7 cut(s) 91, 223, 304, 461, 464, 536, 692
GsaI CCCAGC 3 cut(s) 535, 542, 847
GsuI CTGGAG 1 cut(s) 326
HaeII RGCGCY 1 cut(s) 249
HaeIII GGCC 4 cut(s) 264, 378, 450, 725
HapII CCGG 5 cut(s) 103, 447, 519, 619, 660
HhaI GCGC 3 cut(s) 95, 248, 303
Hin1I GRCGYC 3 cut(s) 246, 570, 650
Hin1II CATG 4 cut(s) 62, 138, 219, 853
Hin6I GCGC 3 cut(s) 93, 246, 301
HinP1I GCGC 3 cut(s) 93, 246, 301
HincII GTYRAC 1 cut(s) 409
HindII GTYRAC 1 cut(s) 409
HindIII AAGCTT 1 cut(s) 584
HinfI GANTC 6 cut(s) 79, 267, 454, 526, 598, 639
HpaI GTTAAC 1 cut(s) 409
HpaII CCGG 5 cut(s) 103, 447, 519, 619, 660
HphI GGTGA 4 cut(s) 220, 277, 508, 832
Hpy166II GTNNAC 1 cut(s) 409
Hpy188I TCNGA 5 cut(s) 118, 123, 597, 603, 740
Hpy188III TCNNGA 2 cut(s) 550, 824
Hpy8I GTNNAC 1 cut(s) 409
Hpy99I CGWCG 4 cut(s) 131, 436, 652, 655
HpyAV CCTTC 3 cut(s) 214, 521, 824
HpyCH4III ACNGT 1 cut(s) 399
HpyCH4IV ACGT 3 cut(s) 489, 570, 650
HpyCH4V TGCA 2 cut(s) 255, 333
HpyF10VI GCNNNNNNNGC 5 cut(s) 252, 261, 544, 553, 621
HpyF3I CTNAG 3 cut(s) 149, 390, 770
HpySE526I ACGT 3 cut(s) 489, 570, 650
Hsp92I GRCGYC 3 cut(s) 246, 570, 650
Hsp92II CATG 4 cut(s) 62, 138, 219, 853
HspAI GCGC 3 cut(s) 93, 246, 301
KasI GGCGCC 1 cut(s) 245
KpnI GGTACC 1 cut(s) 685
KspAI GTTAAC 1 cut(s) 409
Kzo9I GATC 3 cut(s) 118, 735, 837
LmnI GCTCC 3 cut(s) 311, 621, 627
Lsp1109I GCAGC 2 cut(s) 475, 547
MaeI CTAG 1 cut(s) 71
MaeII ACGT 3 cut(s) 489, 570, 650
MaeIII GTNAC 2 cut(s) 76, 180
MalI GATC 3 cut(s) 120, 737, 839
MbiI CCGCTC 1 cut(s) 624
MboI GATC 3 cut(s) 118, 735, 837
MboII GAAGA 4 cut(s) 59, 351, 826, 839
MfeI CAATTG 1 cut(s) 328
MflI RGATCY 1 cut(s) 118
MlsI TGGCCA 1 cut(s) 725
MluCI AATT 1 cut(s) 328
MluNI TGGCCA 1 cut(s) 725
Mly113I GGCGCC 1 cut(s) 246
MlyI GAGTC 1 cut(s) 73
Mox20I TGGCCA 1 cut(s) 725
MscI TGGCCA 1 cut(s) 725
MseI TTAA 2 cut(s) 408, 423
Msp20I TGGCCA 1 cut(s) 725
MspA1I CMGCKG 1 cut(s) 538
MspI CCGG 5 cut(s) 103, 447, 519, 619, 660
MspR9I CCNGG 2 cut(s) 404, 661
MunI CAATTG 1 cut(s) 328
MvaI CCWGG 1 cut(s) 404
MvnI CGCG 2 cut(s) 95, 303
MwoI GCNNNNNNNGC 5 cut(s) 252, 261, 544, 553, 621
NarI GGCGCC 1 cut(s) 246
NciI CCSGG 1 cut(s) 661
NdeII GATC 3 cut(s) 118, 735, 837
NlaIII CATG 4 cut(s) 62, 138, 219, 853
NlaIV GGNNCC 5 cut(s) 247, 307, 594, 629, 683
NmeAIII GCCGAG 2 cut(s) 539, 660
NmuCI GTSAC 1 cut(s) 76
NspI RCATGY 1 cut(s) 138
NspV TTCGAA 1 cut(s) 362
PaqCI CACCTGC 1 cut(s) 260
PfeI GAWTC 5 cut(s) 267, 454, 526, 598, 639
PflMI CCANNNNNTGG 1 cut(s) 538
PkrI GCNGC 7 cut(s) 92, 224, 305, 462, 465, 537, 693
PleI GAGTC 1 cut(s) 73
PluTI GGCGCC 1 cut(s) 249
PpsI GAGTC 1 cut(s) 73
PpuMI RGGWCCY 1 cut(s) 670
Psp5II RGGWCCY 1 cut(s) 670
Psp6I CCWGG 1 cut(s) 402
PspFI CCCAGC 3 cut(s) 531, 538, 843
PspGI CCWGG 1 cut(s) 402
PspN4I GGNNCC 5 cut(s) 247, 307, 594, 629, 683
PspPI GGNCC 5 cut(s) 192, 377, 449, 593, 670
PspPPI RGGWCCY 1 cut(s) 670
PstNI CAGNNNCTG 2 cut(s) 403, 538
PsuI RGATCY 1 cut(s) 118
PvuII CAGCTG 1 cut(s) 538
RsaI GTAC 1 cut(s) 683
RsaNI GTAC 1 cut(s) 682
SaqAI TTAA 2 cut(s) 408, 423
SatI GCNGC 7 cut(s) 91, 223, 304, 461, 464, 536, 692
Sau3AI GATC 3 cut(s) 118, 735, 837
Sau96I GGNCC 5 cut(s) 192, 377, 449, 593, 670
SchI GAGTC 1 cut(s) 73
ScrFI CCNGG 2 cut(s) 404, 661
SfcI CTRYAG 1 cut(s) 395
SfoI GGCGCC 1 cut(s) 247
SfuI TTCGAA 1 cut(s) 362
SinI GGWCC 3 cut(s) 192, 593, 670
Sse9I AATT 1 cut(s) 328
SsiI CCGC 9 cut(s) 90, 95, 222, 303, 386, 458, 461, 624, 692
SspDI GGCGCC 1 cut(s) 245
SspMI CTAG 1 cut(s) 71
StyD4I CCNGG 2 cut(s) 402, 659
StyI CCWWGG 1 cut(s) 241
TaaI ACNGT 1 cut(s) 399
TaiI ACGT 3 cut(s) 492, 573, 653
TaqI TCGA 4 cut(s) 351, 362, 434, 495
TasI AATT 1 cut(s) 328
TauI GCSGC 5 cut(s) 93, 225, 306, 463, 694
TfiI GAWTC 5 cut(s) 267, 454, 526, 598, 639
Tru1I TTAA 2 cut(s) 408, 423
Tru9I TTAA 2 cut(s) 408, 423
TscAI CASTG 1 cut(s) 784
TseFI GTSAC 1 cut(s) 76
TseI GCWGC 2 cut(s) 463, 535
Tsp45I GTSAC 1 cut(s) 76
TspDTI ATGAA 2 cut(s) 358, 713
TspRI CASTG 1 cut(s) 784
Van91I CCANNNNNTGG 1 cut(s) 538
VpaK11BI GGWCC 3 cut(s) 192, 593, 670
XceI RCATGY 1 cut(s) 138
XspI CTAG 1 cut(s) 71
ZraI GACGTC 2 cut(s) 571, 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.