Prupe.6G216300_v2.0.a1
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0013008
Physical Location & Seq
Reverse (-)
22367091 .. 22369422
2332 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G216300.1

Sequence Viewer

Length: 828 bp
ATGGGTGCTGCTGCTAAGACTGCTTGTGCTCTGATATTCATAACCGTTCTAAACGGCGCCGTTTTCCGGCCCACCTCATCAGATCCAAGCGACGAGGCTTGCCTGACCCACCTAAGCCAATCCATACAAGACGCAACAAAGTCCCTCCAGAACTGGACCAAAACCACCTTCGCAAACCCATGTAGCGGCTTCACCTCCTACCTCCAAGGCGCCACCTGCAACAATGGCAGAATCTACAAGCTCTCCCTCACGAACCTCGCTCTGCGCGGCTCAATCTCGCCGTTTTTGGCCAACTGCACCAACCTCCAAGCCCTCGACCTCTCCTCCAACTTCCTCACCGGCCCAATCCCATCGGACCTCCAGTACTTGGTCAACCTCGCCGTCCTGAACCTCTCCTCCAATCGGTTGCAGGGCCCAATCCCGCCGCAGCTCACATTGTGCGCCTATCTCAACGTCATCGATCTCCACGACAACTTACTCACCGGAACGATCCCTCAGCAATTGGGCCTTCTTGTCCGGCTTTCGGCTTTCGACGTCTCAAACAACAAGCTTTCGGGGCCGATACCGGTTTCTTTGGGAAATCGGAGTGGGAATTTGCCGAGGTTTAATGCCACGTCGTTCGATGGCAACAAGGAGCTTTATGGGTACCCTTTGGCCCCTCTGAAAAGCAAAGGGCTTTCGGTTTTGGCCATTGTTGGGATCGGATTGGGAAGTGGGTTTGCGAGTTTGGTGCTTAGTTTCACTGGAGTGTGCATATGGTTGAAAATTACAGAGCGCAAGATGGCTCTTGAAGAGGGCAAGGTCAGCCACCTCATGCCTGATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8

Protein Analysis

276

Amino Acids

29.32

Weight (kDa)

8.67

Isoelectric Point (pI)

33.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013008)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49750 AT3G49750 AT5G65830
fragaria_vesca FvH4_1g18280
malus_domestica MD02G1190100.v1.1 MD15G1301200.v1.1
prunus_persica Prupe.6G216300_v2.0.a1
pyrus_communis pycom15g26380
rosa_chinensis RchiOBHm_Chr2g0108871
rosa_laevigata RLG00000017693
rosa_multiflora Rmu_sc0004830.1_g000001
rosa_roxburghii Rroxscaffold_2G00134760
rosa_rugosa Rorug02G0156500
rosa_samantha Rh2AG206900 Rh2BG218100 Rh2CG210100 Rh2DG213200
rosa_wichuraiana Rw2G016440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 224
AatII GACGTC 1 cut(s) 537
Acc36I ACCTGC 1 cut(s) 224
Acc65I GGTACC 1 cut(s) 645
AccB1I GGYRCC 3 cut(s) 56, 209, 645
AccB7I CCANNNNNTGG 1 cut(s) 367
AccII CGCG 1 cut(s) 267
AciI CCGC 4 cut(s) 186, 267, 422, 425
AclWI GGATC 3 cut(s) 77, 484, 707
AcoI YGGCCR 2 cut(s) 288, 687
AcsI RAATTY 1 cut(s) 592
AcyI GRCGYC 3 cut(s) 57, 210, 534
AdeI CACNNNGTG 1 cut(s) 438
AfaI GTAC 2 cut(s) 365, 647
AfiI CCNNNNNNNGG 6 cut(s) 66, 185, 367, 402, 523, 696
AgeI ACCGGT 1 cut(s) 565
AgsI TTSAA 2 cut(s) 763, 791
AjiI CACGTC 1 cut(s) 615
AjuI GAANNNNNNNTTGG 2 cut(s) 152, 184
AleI CACNNNNGTG 1 cut(s) 746
AloI GAACNNNNNNTCC 2 cut(s) 380, 412
AluBI AGCT 4 cut(s) 241, 430, 550, 637
AluI AGCT 4 cut(s) 241, 430, 550, 637
Alw21I GWGCWC 1 cut(s) 31
Alw26I GTCTC 1 cut(s) 541
AlwI GGATC 3 cut(s) 77, 484, 707
AoxI GGCC 8 cut(s) 68, 288, 340, 412, 505, 557, 654, 687
ApaI GGGCCC 1 cut(s) 416
ApeKI GCWGC 3 cut(s) 8, 11, 427
ApoI RAATTY 1 cut(s) 592
AsiGI ACCGGT 1 cut(s) 565
Asp718I GGTACC 1 cut(s) 645
AspLEI GCGC 5 cut(s) 59, 212, 267, 443, 777
AspS9I GGNCC 9 cut(s) 69, 156, 341, 355, 412, 413, 505, 557, 655
AsuHPI GGTGA 3 cut(s) 184, 328, 472
AvaII GGWCC 2 cut(s) 156, 355
BaeGI GKGCMC 1 cut(s) 416
BalI TGGCCA 2 cut(s) 290, 689
BanI GGYRCC 3 cut(s) 56, 209, 645
BanII GRGCYC 1 cut(s) 416
Bbv12I GWGCWC 1 cut(s) 31
BbvCI CCTCAGC 1 cut(s) 495
BbvI GCAGC 1 cut(s) 439
BccI CCATC 3 cut(s) 358, 617, 775
BceAI ACGGC 4 cut(s) 44, 70, 265, 365
BcgI CGANNNNNNTGC 2 cut(s) 712, 746
BcoDI GTCTC 1 cut(s) 541
BfoI RGCGCY 2 cut(s) 60, 213
BfuAI ACCTGC 1 cut(s) 224
BisI GCNGC 6 cut(s) 9, 12, 187, 268, 425, 428
BlsI GCNGC 6 cut(s) 10, 13, 188, 269, 426, 429
BmcAI AGTACT 1 cut(s) 365
Bme18I GGWCC 2 cut(s) 156, 355
BmgBI CACGTC 1 cut(s) 615
BmgT120I GGNCC 9 cut(s) 69, 156, 341, 355, 412, 413, 505, 557, 655
BmiI GGNNCC 6 cut(s) 58, 211, 414, 558, 647, 657
BpmI CTGGAG 3 cut(s) 131, 344, 765
Bpu10I CCTNAGC 2 cut(s) 113, 495
Bsa29I ATCGAT 1 cut(s) 459
BsaHI GRCGYC 3 cut(s) 57, 210, 534
BsaJI CCNNGG 2 cut(s) 205, 599
BsaWI WCCGGW 2 cut(s) 482, 565
BsaXI ACNNNNNCTCC 6 cut(s) 227, 257, 308, 338, 380, 410
Bsc4I CCNNNNNNNGG 6 cut(s) 66, 185, 367, 402, 523, 696
Bse118I RCCGGY 2 cut(s) 338, 565
Bse1I ACTGG 3 cut(s) 158, 361, 748
BseCI ATCGAT 1 cut(s) 459
BseDI CCNNGG 2 cut(s) 205, 599
BseLI CCNNNNNNNGG 6 cut(s) 66, 185, 367, 402, 523, 696
BseMII CTCAG 1 cut(s) 509
BseNI ACTGG 3 cut(s) 158, 361, 748
BseRI GAGGAG 2 cut(s) 313, 385
BseSI GKGCMC 1 cut(s) 416
BseXI GCAGC 1 cut(s) 439
BsgI GTGCAG 1 cut(s) 280
Bsh1236I CGCG 1 cut(s) 267
BshFI GGCC 8 cut(s) 70, 290, 342, 414, 507, 559, 656, 689
BshNI GGYRCC 3 cut(s) 56, 209, 645
BshTI ACCGGT 1 cut(s) 565
BshVI ATCGAT 1 cut(s) 459
BsiHKAI GWGCWC 1 cut(s) 31
BsiSI CCGG 5 cut(s) 67, 339, 483, 517, 566
BslFI GGGAC 1 cut(s) 127
BslI CCNNNNNNNGG 6 cut(s) 66, 185, 367, 402, 523, 696
BsmAI GTCTC 1 cut(s) 541
BsmBI CGTCTC 1 cut(s) 541
BsmFI GGGAC 1 cut(s) 127
BsnI GGCC 8 cut(s) 70, 290, 342, 414, 507, 559, 656, 689
Bsp120I GGGCCC 1 cut(s) 412
Bsp1286I GDGCHC 2 cut(s) 31, 416
Bsp143I GATC 4 cut(s) 82, 460, 489, 699
BspACI CCGC 4 cut(s) 186, 267, 422, 425
BspANI GGCC 8 cut(s) 70, 290, 342, 414, 507, 559, 656, 689
BspCNI CTCAG 1 cut(s) 508
BspDI ATCGAT 1 cut(s) 459
BspFNI CGCG 1 cut(s) 267
BspLI GGNNCC 6 cut(s) 58, 211, 414, 558, 647, 657
BspMI ACCTGC 1 cut(s) 224
BspPI GGATC 3 cut(s) 77, 484, 707
BspT107I GGYRCC 3 cut(s) 56, 209, 645
BsrFI RCCGGY 2 cut(s) 338, 565
BsrI ACTGG 3 cut(s) 158, 361, 748
BssAI RCCGGY 2 cut(s) 338, 565
BssECI CCNNGG 2 cut(s) 205, 599
BssMI GATC 4 cut(s) 82, 460, 489, 699
BssNI GRCGYC 3 cut(s) 57, 210, 534
BssT1I CCWWGG 1 cut(s) 205
Bst4CI ACNGT 1 cut(s) 46
Bst6I CTCTTC 1 cut(s) 786
BstACI GRCGYC 3 cut(s) 57, 210, 534
BstC8I GCNNGC 1 cut(s) 100
BstDEI CTNAG 4 cut(s) 15, 113, 495, 734
BstFNI CGCG 1 cut(s) 267
BstH2I RGCGCY 2 cut(s) 60, 213
BstHHI GCGC 5 cut(s) 59, 212, 267, 443, 777
BstKTI GATC 4 cut(s) 85, 463, 492, 702
BstMAI GTCTC 1 cut(s) 541
BstMBI GATC 4 cut(s) 82, 460, 489, 699
BstMWI GCNNNNNNNGC 5 cut(s) 20, 216, 225, 556, 804
BstSLI GKGCMC 1 cut(s) 416
BstUI CGCG 1 cut(s) 267
BstV1I GCAGC 1 cut(s) 439
BstX2I RGATCY 1 cut(s) 82
BstYI RGATCY 1 cut(s) 82
Bsu15I ATCGAT 1 cut(s) 459
BsuRI GGCC 8 cut(s) 70, 290, 342, 414, 507, 559, 656, 689
BsuTUI ATCGAT 1 cut(s) 459
BtrI CACGTC 1 cut(s) 615
BtsIMutI CAGTG 1 cut(s) 741
BveI ACCTGC 1 cut(s) 224
Cac8I GCNNGC 1 cut(s) 100
CfoI GCGC 5 cut(s) 59, 212, 267, 443, 777
Cfr10I RCCGGY 2 cut(s) 338, 565
Cfr13I GGNCC 9 cut(s) 69, 156, 341, 355, 412, 413, 505, 557, 655
ClaI ATCGAT 1 cut(s) 459
CseI GACGC 1 cut(s) 140
Csp6I GTAC 2 cut(s) 364, 646
CspAI ACCGGT 1 cut(s) 565
CviAII CATG 2 cut(s) 180, 814
CviQI GTAC 2 cut(s) 364, 646
DdeI CTNAG 4 cut(s) 15, 113, 495, 734
DinI GGCGCC 2 cut(s) 58, 211
DpnI GATC 4 cut(s) 84, 462, 491, 701
DpnII GATC 4 cut(s) 82, 460, 489, 699
DraIII CACNNNGTG 1 cut(s) 438
EaeI YGGCCR 2 cut(s) 288, 687
Eam1104I CTCTTC 1 cut(s) 786
EarI CTCTTC 1 cut(s) 786
Eco130I CCWWGG 1 cut(s) 205
Eco24I GRGCYC 1 cut(s) 416
Eco47I GGWCC 2 cut(s) 156, 355
EcoO109I RGGNCCY 1 cut(s) 412
EcoT14I CCWWGG 1 cut(s) 205
EcoT38I GRGCYC 1 cut(s) 416
EgeI GGCGCC 2 cut(s) 58, 211
EheI GGCGCC 2 cut(s) 58, 211
ErhI CCWWGG 1 cut(s) 205
Esp3I CGTCTC 1 cut(s) 541
FaeI CATG 2 cut(s) 183, 817
FaiI YATR 7 cut(s) 41, 125, 181, 642, 755, 757, 815
FaqI GGGAC 1 cut(s) 127
FatI CATG 2 cut(s) 179, 813
FauI CCCGC 1 cut(s) 429
FauNDI CATATG 1 cut(s) 755
Fnu4HI GCNGC 6 cut(s) 9, 12, 187, 268, 425, 428
FriOI GRGCYC 1 cut(s) 416
Fsp4HI GCNGC 6 cut(s) 9, 12, 187, 268, 425, 428
GlaI GCGC 5 cut(s) 58, 211, 266, 442, 776
GluI GCNGC 6 cut(s) 9, 12, 187, 268, 425, 428
GsuI CTGGAG 3 cut(s) 131, 344, 765
HaeII RGCGCY 2 cut(s) 60, 213
HaeIII GGCC 8 cut(s) 70, 290, 342, 414, 507, 559, 656, 689
HapII CCGG 5 cut(s) 67, 339, 483, 517, 566
HgaI GACGC 1 cut(s) 140
HhaI GCGC 5 cut(s) 59, 212, 267, 443, 777
Hin1I GRCGYC 3 cut(s) 57, 210, 534
Hin1II CATG 2 cut(s) 183, 817
Hin6I GCGC 5 cut(s) 57, 210, 265, 441, 775
HinP1I GCGC 5 cut(s) 57, 210, 265, 441, 775
HincII GTYRAC 1 cut(s) 373
HindII GTYRAC 1 cut(s) 373
HindIII AAGCTT 1 cut(s) 548
HinfI GANTC 1 cut(s) 231
HpaII CCGG 5 cut(s) 67, 339, 483, 517, 566
HphI GGTGA 3 cut(s) 184, 328, 472
Hpy166II GTNNAC 1 cut(s) 373
Hpy188I TCNGA 6 cut(s) 33, 82, 355, 585, 663, 704
Hpy188III TCNNGA 4 cut(s) 148, 250, 385, 788
Hpy8I GTNNAC 1 cut(s) 373
Hpy99I CGWCG 3 cut(s) 95, 536, 619
HpyAV CCTTC 2 cut(s) 178, 518
HpyCH4III ACNGT 1 cut(s) 46
HpyCH4IV ACGT 3 cut(s) 453, 534, 614
HpyCH4V TGCA 4 cut(s) 219, 297, 409, 753
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 216, 225, 556, 804
HpyF3I CTNAG 4 cut(s) 15, 113, 495, 734
HpySE526I ACGT 3 cut(s) 453, 534, 614
Hsp92I GRCGYC 3 cut(s) 57, 210, 534
Hsp92II CATG 2 cut(s) 183, 817
HspAI GCGC 5 cut(s) 57, 210, 265, 441, 775
KasI GGCGCC 2 cut(s) 56, 209
KpnI GGTACC 1 cut(s) 649
Kzo9I GATC 4 cut(s) 82, 460, 489, 699
LmnI GCTCC 1 cut(s) 634
Lsp1109I GCAGC 1 cut(s) 439
MaeII ACGT 3 cut(s) 453, 534, 614
MalI GATC 4 cut(s) 84, 462, 491, 701
MboI GATC 4 cut(s) 82, 460, 489, 699
MboII GAAGA 1 cut(s) 803
MfeI CAATTG 1 cut(s) 500
MflI RGATCY 1 cut(s) 82
MhlI GDGCHC 2 cut(s) 31, 416
MlsI TGGCCA 2 cut(s) 290, 689
MluCI AATT 3 cut(s) 500, 592, 765
MluNI TGGCCA 2 cut(s) 290, 689
Mly113I GGCGCC 2 cut(s) 57, 210
MmeI TCCRAC 1 cut(s) 351
Mox20I TGGCCA 2 cut(s) 290, 689
MscI TGGCCA 2 cut(s) 290, 689
MseI TTAA 1 cut(s) 606
MslI CAYNNNNRTG 1 cut(s) 746
Msp20I TGGCCA 2 cut(s) 290, 689
MspI CCGG 5 cut(s) 67, 339, 483, 517, 566
MunI CAATTG 1 cut(s) 500
MvnI CGCG 1 cut(s) 267
MwoI GCNNNNNNNGC 5 cut(s) 20, 216, 225, 556, 804
NarI GGCGCC 2 cut(s) 57, 210
NdeI CATATG 1 cut(s) 755
NdeII GATC 4 cut(s) 82, 460, 489, 699
NlaIII CATG 2 cut(s) 183, 817
NlaIV GGNNCC 6 cut(s) 58, 211, 414, 558, 647, 657
NmeAIII GCCGAG 1 cut(s) 624
OliI CACNNNNGTG 1 cut(s) 746
PaqCI CACCTGC 1 cut(s) 224
PcsI WCGNNNNNNNCGW 1 cut(s) 465
PfeI GAWTC 1 cut(s) 231
PflMI CCANNNNNTGG 1 cut(s) 367
PinAI ACCGGT 1 cut(s) 565
PkrI GCNGC 6 cut(s) 10, 13, 188, 269, 426, 429
PluTI GGCGCC 2 cut(s) 60, 213
PspN4I GGNNCC 6 cut(s) 58, 211, 414, 558, 647, 657
PspOMI GGGCCC 1 cut(s) 412
PspPI GGNCC 9 cut(s) 69, 156, 341, 355, 412, 413, 505, 557, 655
PsuI RGATCY 1 cut(s) 82
RsaI GTAC 2 cut(s) 365, 647
RsaNI GTAC 2 cut(s) 364, 646
RseI CAYNNNNRTG 1 cut(s) 746
SaqAI TTAA 1 cut(s) 606
SatI GCNGC 6 cut(s) 9, 12, 187, 268, 425, 428
Sau3AI GATC 4 cut(s) 82, 460, 489, 699
Sau96I GGNCC 9 cut(s) 69, 156, 341, 355, 412, 413, 505, 557, 655
ScaI AGTACT 1 cut(s) 365
SduI GDGCHC 2 cut(s) 31, 416
SfoI GGCGCC 2 cut(s) 58, 211
SinI GGWCC 2 cut(s) 156, 355
SmiMI CAYNNNNRTG 1 cut(s) 746
Sse9I AATT 3 cut(s) 500, 592, 765
SsiI CCGC 4 cut(s) 186, 267, 422, 425
SspDI GGCGCC 2 cut(s) 56, 209
StyI CCWWGG 1 cut(s) 205
TaaI ACNGT 1 cut(s) 46
TaiI ACGT 3 cut(s) 456, 537, 617
TaqI TCGA 4 cut(s) 315, 459, 531, 621
TasI AATT 3 cut(s) 500, 592, 765
TatI WGTACW 1 cut(s) 363
TauI GCSGC 3 cut(s) 189, 270, 427
TfiI GAWTC 1 cut(s) 231
Tru1I TTAA 1 cut(s) 606
Tru9I TTAA 1 cut(s) 606
TscAI CASTG 1 cut(s) 748
TseI GCWGC 3 cut(s) 8, 11, 427
TspDTI ATGAA 1 cut(s) 28
TspRI CASTG 1 cut(s) 748
Van91I CCANNNNNTGG 1 cut(s) 367
VpaK11BI GGWCC 2 cut(s) 156, 355
XapI RAATTY 1 cut(s) 592
ZraI GACGTC 1 cut(s) 535
ZrmI AGTACT 1 cut(s) 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.