MD15G1301200.v1.1
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0013008
Physical Location & Seq
Forward (+)
28956164 .. 28957006
843 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1301200.v1.1.491

Sequence Viewer

Length: 843 bp
ATGGGTTCTGCTCCTACTCCTGCTAGAACTGCTTCTACTTCTGCTATGTTATTGATAACTCTGCTAAACGTCGCTGTTTTCCGACCCACCACATCAGATCCGAGCGACGAGGCGTGCCTAACCCACCTGAGTGAATCCCTCCAAGACCCAACAAAATCCCTCAAGAATTGGACCAAATCCACCTTCGCCAACCCCTGCAGCGGCTTCACCTCTTACCTCCAGGGCGCCACCTGCAACAATGGCCGCATCTACAAGCTCTCTCTCACCAACCTCTCCCTCCGCGGCTCCATCTCCCCCTTCCTCGCCAACTGCACCAACCTCCAGGCCCTCGACCTCTCTTCCAACTTCCTCACCGGCCCCATCCCCTCTGACCTCCAGTACCTCGTCAACCTCGCCGTCCTCAACCTCTCCTCCAACCAATTATCCGGTCCGATTCCGCCGCAGCTCACATTGTGCGCCTACCTCAACGTCATTGACCTCCACGACAACTCCCTCACCGGCCCCATTCCCCAGCAATTGGGCCTTCTCGTCCGCCTCTCCGCCTTCGACGTCTCCAACAACAAACTCGCGGGTCCGATTCCGGTCTCGCTGGGCAATCGGAGCGGGAACCTGCCGAGATTCAATGCGACATCGTTTGAGGGAAACAAGGAGCTTTATGGGTACCCTTTGCCACCGCTGAAAAGCAAGGGGCTTTCGGTTCTGGCGATCGTCGGCATCGGATTGGGAAGTGGGTTCGCGAGCTTGGTGCTTAGTTTTACCGGCGTCTGCATTTGGTTGAAAATTACAGAGCGGAAGATGGCGCTGGAAGAAGGGAAGATCAGCCACCTCATGCCTGATTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8

Protein Analysis

281

Amino Acids

29.86

Weight (kDa)

8.51

Isoelectric Point (pI)

31.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013008)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49750 AT3G49750 AT5G65830
fragaria_vesca FvH4_1g18280
malus_domestica MD02G1190100.v1.1 MD15G1301200.v1.1
prunus_persica Prupe.6G216300_v2.0.a1
pyrus_communis pycom15g26380
rosa_chinensis RchiOBHm_Chr2g0108871
rosa_laevigata RLG00000017693
rosa_multiflora Rmu_sc0004830.1_g000001
rosa_roxburghii Rroxscaffold_2G00134760
rosa_rugosa Rorug02G0156500
rosa_samantha Rh2AG206900 Rh2BG218100 Rh2CG210100 Rh2DG213200
rosa_wichuraiana Rw2G016440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 239
AatII GACGTC 1 cut(s) 552
Acc36I ACCTGC 2 cut(s) 239, 618
Acc65I GGTACC 1 cut(s) 660
AccB1I GGYRCC 2 cut(s) 224, 660
AccB7I CCANNNNNTGG 1 cut(s) 517
AccBSI CCGCTC 2 cut(s) 603, 790
AccII CGCG 3 cut(s) 282, 569, 737
AclWI GGATC 1 cut(s) 92
AcoI YGGCCR 1 cut(s) 241
AcyI GRCGYC 3 cut(s) 225, 549, 762
AdeI CACNNNGTG 1 cut(s) 453
AfaI GTAC 2 cut(s) 380, 662
AfiI CCNNNNNNNGG 2 cut(s) 200, 517
AgsI TTSAA 2 cut(s) 622, 778
AjnI CCWGG 2 cut(s) 219, 321
AjuI GAANNNNNNNTTGG 2 cut(s) 167, 199
AleI CACNNNNGTG 1 cut(s) 129
AluBI AGCT 4 cut(s) 256, 445, 652, 741
AluI AGCT 4 cut(s) 256, 445, 652, 741
Alw26I GTCTC 2 cut(s) 556, 589
AlwI GGATC 1 cut(s) 92
AoxI GGCC 5 cut(s) 241, 324, 355, 499, 520
ApeKI GCWGC 2 cut(s) 198, 442
Asp700I GAANNNNTTC 1 cut(s) 31
Asp718I GGTACC 1 cut(s) 660
AspLEI GCGC 3 cut(s) 227, 458, 802
AspS9I GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
AsuHPI GGTGA 4 cut(s) 199, 256, 343, 487
AvaII GGWCC 3 cut(s) 171, 428, 572
BanI GGYRCC 2 cut(s) 224, 660
BbvI GCAGC 2 cut(s) 210, 454
BccI CCATC 3 cut(s) 296, 368, 790
BceAI ACGGC 1 cut(s) 380
BcgI CGANNNNNNTGC 2 cut(s) 727, 761
BciT130I CCWGG 2 cut(s) 221, 323
BcoDI GTCTC 2 cut(s) 556, 589
BfaI CTAG 1 cut(s) 24
BfmI CTRYAG 1 cut(s) 196
BfoI RGCGCY 2 cut(s) 228, 803
BfuAI ACCTGC 2 cut(s) 239, 618
BisI GCNGC 6 cut(s) 199, 202, 244, 283, 440, 443
BlsI GCNGC 6 cut(s) 200, 203, 245, 284, 441, 444
Bme1390I CCNGG 2 cut(s) 221, 323
Bme18I GGWCC 3 cut(s) 171, 428, 572
BmgT120I GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
BmiI GGNNCC 7 cut(s) 226, 286, 358, 502, 573, 608, 662
BmrFI CCNGG 2 cut(s) 221, 323
BmsI GCATC 2 cut(s) 255, 723
BpmI CTGGAG 3 cut(s) 203, 305, 359
BpuEI CTTGAG 1 cut(s) 146
BsaHI GRCGYC 3 cut(s) 225, 549, 762
BsaI GGTCTC 1 cut(s) 589
BsaJI CCNNGG 2 cut(s) 220, 280
BsaWI WCCGGW 2 cut(s) 425, 580
BsaXI ACNNNNNCTCC 4 cut(s) 395, 425, 473, 503
Bsc4I CCNNNNNNNGG 2 cut(s) 200, 517
Bse118I RCCGGY 3 cut(s) 353, 497, 758
Bse1I ACTGG 1 cut(s) 376
BseBI CCWGG 2 cut(s) 221, 323
BseDI CCNNGG 2 cut(s) 220, 280
BseGI GGATG 1 cut(s) 360
BseLI CCNNNNNNNGG 2 cut(s) 200, 517
BseMII CTCAG 1 cut(s) 119
BseNI ACTGG 1 cut(s) 376
BseRI GAGGAG 1 cut(s) 400
BseXI GCAGC 2 cut(s) 210, 454
BseYI CCCAGC 2 cut(s) 510, 589
BsgI GTGCAG 1 cut(s) 295
Bsh1236I CGCG 3 cut(s) 282, 569, 737
Bsh1285I CGRYCG 1 cut(s) 708
BshFI GGCC 5 cut(s) 243, 326, 357, 501, 522
BshNI GGYRCC 2 cut(s) 224, 660
BsiEI CGRYCG 1 cut(s) 708
BsiSI CCGG 5 cut(s) 354, 426, 498, 581, 759
BslI CCNNNNNNNGG 2 cut(s) 200, 517
BsmAI GTCTC 2 cut(s) 556, 589
BsmBI CGTCTC 1 cut(s) 556
BsnI GGCC 5 cut(s) 243, 326, 357, 501, 522
Bso31I GGTCTC 1 cut(s) 589
Bsp143I GATC 3 cut(s) 97, 705, 816
Bsp68I TCGCGA 1 cut(s) 737
BspANI GGCC 5 cut(s) 243, 326, 357, 501, 522
BspCNI CTCAG 1 cut(s) 120
BspFNI CGCG 3 cut(s) 282, 569, 737
BspLI GGNNCC 7 cut(s) 226, 286, 358, 502, 573, 608, 662
BspMAI CTGCAG 1 cut(s) 200
BspMI ACCTGC 2 cut(s) 239, 618
BspPI GGATC 1 cut(s) 92
BspT107I GGYRCC 2 cut(s) 224, 660
BspTNI GGTCTC 1 cut(s) 589
BsrBI CCGCTC 2 cut(s) 603, 790
BsrFI RCCGGY 3 cut(s) 353, 497, 758
BsrI ACTGG 1 cut(s) 376
BssAI RCCGGY 3 cut(s) 353, 497, 758
BssECI CCNNGG 2 cut(s) 220, 280
BssMI GATC 3 cut(s) 97, 705, 816
BssNI GRCGYC 3 cut(s) 225, 549, 762
Bst2UI CCWGG 2 cut(s) 221, 323
Bst6I CTCTTC 1 cut(s) 343
BstACI GRCGYC 3 cut(s) 225, 549, 762
BstC8I GCNNGC 2 cut(s) 115, 739
BstDEI CTNAG 2 cut(s) 128, 749
BstDSI CCRYGG 1 cut(s) 280
BstF5I GGATG 1 cut(s) 360
BstFNI CGCG 3 cut(s) 282, 569, 737
BstH2I RGCGCY 2 cut(s) 228, 803
BstHHI GCGC 3 cut(s) 227, 458, 802
BstKTI GATC 3 cut(s) 100, 708, 819
BstMAI GTCTC 2 cut(s) 556, 589
BstMBI GATC 3 cut(s) 97, 705, 816
BstMCI CGRYCG 1 cut(s) 708
BstMWI GCNNNNNNNGC 4 cut(s) 29, 231, 240, 600
BstNI CCWGG 2 cut(s) 221, 323
BstSCI CCNGG 2 cut(s) 219, 321
BstSFI CTRYAG 1 cut(s) 196
BstUI CGCG 3 cut(s) 282, 569, 737
BstV1I GCAGC 2 cut(s) 210, 454
BstX2I RGATCY 1 cut(s) 97
BstYI RGATCY 1 cut(s) 97
BsuRI GGCC 5 cut(s) 243, 326, 357, 501, 522
BtgI CCRYGG 1 cut(s) 280
BtsCI GGATG 1 cut(s) 360
BtuMI TCGCGA 1 cut(s) 737
BveI ACCTGC 2 cut(s) 239, 618
Cac8I GCNNGC 2 cut(s) 115, 739
CfoI GCGC 3 cut(s) 227, 458, 802
Cfr10I RCCGGY 3 cut(s) 353, 497, 758
Cfr13I GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
Cfr42I CCGCGG 1 cut(s) 283
CpoI CGGWCCG 1 cut(s) 428
CseI GACGC 1 cut(s) 751
Csp6I GTAC 2 cut(s) 379, 661
CspI CGGWCCG 1 cut(s) 428
CviAII CATG 1 cut(s) 829
CviQI GTAC 2 cut(s) 379, 661
DdeI CTNAG 2 cut(s) 128, 749
DinI GGCGCC 1 cut(s) 226
DpnI GATC 3 cut(s) 99, 707, 818
DpnII GATC 3 cut(s) 97, 705, 816
DraIII CACNNNGTG 1 cut(s) 453
EaeI YGGCCR 1 cut(s) 241
Eam1104I CTCTTC 1 cut(s) 343
EarI CTCTTC 1 cut(s) 343
EciI GGCGGA 3 cut(s) 426, 521, 529
Eco31I GGTCTC 1 cut(s) 589
Eco47I GGWCC 3 cut(s) 171, 428, 572
EcoO109I RGGNCCY 1 cut(s) 325
EcoRII CCWGG 2 cut(s) 219, 321
EgeI GGCGCC 1 cut(s) 226
EheI GGCGCC 1 cut(s) 226
Esp3I CGTCTC 1 cut(s) 556
FaeI CATG 1 cut(s) 832
FaiI YATR 3 cut(s) 47, 657, 830
FatI CATG 1 cut(s) 828
FauI CCCGC 2 cut(s) 562, 596
Fnu4HI GCNGC 6 cut(s) 199, 202, 244, 283, 440, 443
FokI GGATG 1 cut(s) 347
Fsp4HI GCNGC 6 cut(s) 199, 202, 244, 283, 440, 443
FspBI CTAG 1 cut(s) 24
GlaI GCGC 3 cut(s) 226, 457, 801
GluI GCNGC 6 cut(s) 199, 202, 244, 283, 440, 443
GsaI CCCAGC 2 cut(s) 514, 593
GsuI CTGGAG 3 cut(s) 203, 305, 359
HaeII RGCGCY 2 cut(s) 228, 803
HaeIII GGCC 5 cut(s) 243, 326, 357, 501, 522
HapII CCGG 5 cut(s) 354, 426, 498, 581, 759
HgaI GACGC 1 cut(s) 751
HhaI GCGC 3 cut(s) 227, 458, 802
Hin1I GRCGYC 3 cut(s) 225, 549, 762
Hin1II CATG 1 cut(s) 832
Hin6I GCGC 3 cut(s) 225, 456, 800
HinP1I GCGC 3 cut(s) 225, 456, 800
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HinfI GANTC 4 cut(s) 134, 433, 577, 618
HpaII CCGG 5 cut(s) 354, 426, 498, 581, 759
HphI GGTGA 4 cut(s) 199, 256, 343, 487
Hpy166II GTNNAC 1 cut(s) 388
Hpy188I TCNGA 8 cut(s) 83, 97, 102, 370, 432, 576, 600, 719
Hpy188III TCNNGA 2 cut(s) 163, 736
Hpy8I GTNNAC 1 cut(s) 388
Hpy99I CGWCG 4 cut(s) 74, 110, 551, 713
HpyAV CCTTC 5 cut(s) 193, 307, 533, 553, 803
HpyCH4IV ACGT 3 cut(s) 69, 468, 549
HpyCH4V TGCA 4 cut(s) 198, 234, 312, 768
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 231, 240, 600
HpyF3I CTNAG 2 cut(s) 128, 749
HpySE526I ACGT 3 cut(s) 69, 468, 549
Hsp92I GRCGYC 3 cut(s) 225, 549, 762
Hsp92II CATG 1 cut(s) 832
HspAI GCGC 3 cut(s) 225, 456, 800
KasI GGCGCC 1 cut(s) 224
KpnI GGTACC 1 cut(s) 664
KspI CCGCGG 1 cut(s) 283
Kzo9I GATC 3 cut(s) 97, 705, 816
LmnI GCTCC 4 cut(s) 16, 290, 600, 649
Lsp1109I GCAGC 2 cut(s) 210, 454
LweI GCATC 2 cut(s) 255, 723
MaeI CTAG 1 cut(s) 24
MaeII ACGT 3 cut(s) 69, 468, 549
MalI GATC 3 cut(s) 99, 707, 818
MbiI CCGCTC 2 cut(s) 603, 790
MboI GATC 3 cut(s) 97, 705, 816
MboII GAAGA 4 cut(s) 330, 805, 818, 826
MfeI CAATTG 1 cut(s) 515
MflI RGATCY 1 cut(s) 97
MluCI AATT 4 cut(s) 166, 419, 515, 780
Mly113I GGCGCC 1 cut(s) 225
MmeI TCCRAC 4 cut(s) 106, 366, 438, 579
MroXI GAANNNNTTC 1 cut(s) 31
MslI CAYNNNNRTG 1 cut(s) 129
MspA1I CMGCKG 3 cut(s) 201, 282, 676
MspI CCGG 5 cut(s) 354, 426, 498, 581, 759
MspR9I CCNGG 2 cut(s) 221, 323
MunI CAATTG 1 cut(s) 515
MvaI CCWGG 2 cut(s) 221, 323
MvnI CGCG 3 cut(s) 282, 569, 737
MwoI GCNNNNNNNGC 4 cut(s) 29, 231, 240, 600
NarI GGCGCC 1 cut(s) 225
NdeII GATC 3 cut(s) 97, 705, 816
NlaIII CATG 1 cut(s) 832
NlaIV GGNNCC 7 cut(s) 226, 286, 358, 502, 573, 608, 662
NmeAIII GCCGAG 1 cut(s) 639
NruI TCGCGA 1 cut(s) 737
OliI CACNNNNGTG 1 cut(s) 129
PaqCI CACCTGC 1 cut(s) 239
PcsI WCGNNNNNNNCGW 1 cut(s) 701
PdmI GAANNNNTTC 1 cut(s) 31
PfeI GAWTC 4 cut(s) 134, 433, 577, 618
PflMI CCANNNNNTGG 1 cut(s) 517
PkrI GCNGC 6 cut(s) 200, 203, 245, 284, 441, 444
Ple19I CGATCG 1 cut(s) 708
PluTI GGCGCC 1 cut(s) 228
Psp6I CCWGG 2 cut(s) 219, 321
PspFI CCCAGC 2 cut(s) 510, 589
PspGI CCWGG 2 cut(s) 219, 321
PspN4I GGNNCC 7 cut(s) 226, 286, 358, 502, 573, 608, 662
PspPI GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
PsrI GAACNNNNNNTAC 2 cut(s) 19, 51
PstI CTGCAG 1 cut(s) 200
PsuI RGATCY 1 cut(s) 97
PvuI CGATCG 1 cut(s) 708
RruI TCGCGA 1 cut(s) 737
RsaI GTAC 2 cut(s) 380, 662
RsaNI GTAC 2 cut(s) 379, 661
RseI CAYNNNNRTG 1 cut(s) 129
Rsr2I CGGWCCG 1 cut(s) 428
RsrII CGGWCCG 1 cut(s) 428
SacII CCGCGG 1 cut(s) 283
SatI GCNGC 6 cut(s) 199, 202, 244, 283, 440, 443
Sau3AI GATC 3 cut(s) 97, 705, 816
Sau96I GGNCC 7 cut(s) 171, 325, 356, 428, 500, 520, 572
ScrFI CCNGG 2 cut(s) 221, 323
SfaNI GCATC 2 cut(s) 255, 723
SfcI CTRYAG 1 cut(s) 196
SfoI GGCGCC 1 cut(s) 226
Sfr303I CCGCGG 1 cut(s) 283
SgrBI CCGCGG 1 cut(s) 283
SinI GGWCC 3 cut(s) 171, 428, 572
SmiMI CAYNNNNRTG 1 cut(s) 129
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
Sse9I AATT 4 cut(s) 166, 419, 515, 780
SspDI GGCGCC 1 cut(s) 224
SspMI CTAG 1 cut(s) 24
StyD4I CCNGG 2 cut(s) 219, 321
TaiI ACGT 3 cut(s) 72, 471, 552
TaqI TCGA 2 cut(s) 330, 546
TasI AATT 4 cut(s) 166, 419, 515, 780
TauI GCSGC 4 cut(s) 204, 246, 285, 442
TfiI GAWTC 4 cut(s) 134, 433, 577, 618
TseI GCWGC 2 cut(s) 198, 442
Van91I CCANNNNNTGG 1 cut(s) 517
VpaK11BI GGWCC 3 cut(s) 171, 428, 572
XmnI GAANNNNTTC 1 cut(s) 31
XspI CTAG 1 cut(s) 24
ZraI GACGTC 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.