MD02G1204200.v1.1

Glutathione S-transferase zeta class-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0007528
Physical Location & Seq
Forward (+)
20399234 .. 20400076
843 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1204200.v1.1.491

Sequence Viewer

Length: 363 bp
ATGGAATCCAGCAGCAATCAGCTACCTGCTGCTTCAAAGCTCCTCCTCTATTCCTACTGGCAAAGCTCTTGCTCTTGGCGCGTCCGCTTCGCTCTCAATCTTAAAGGACTTCCGTACGAGTACAAACCGGTGAACCTACCAGCTGGAGAGCAGTTCAGTCCAGCGTTTAACCGGTTGAATCCTCTTCATTTTGTTCCGGTGTTGGTCGATGGGGATACGGTGGTTTCAGACTCCTTTGCGATACTGCTGGTTAGTGTAATTTGTTGGGAAATGGATCATCTGTTTACAGTTTTTGAAGGTTTTACTTGTGCCTCTAAGTGTTCTGTTATTTGGGTACAATATGTTCTTGTGATGCCCGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120
Pfam Domains
Protein Families
GST_C_2 GST_C_3 GST_N_2 GST_N_3

Protein Analysis

121

Amino Acids

13.57

Weight (kDa)

5.19

Isoelectric Point (pI)

39.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 13 - 82 3.3e-14 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 16 - 82 6.2e-13 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 22 - 82 1.3e-17 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 34
AccII CGCG 1 cut(s) 81
AciI CCGC 1 cut(s) 85
AclWI GGATC 1 cut(s) 282
AfaI GTAC 3 cut(s) 116, 122, 336
AgeI ACCGGT 2 cut(s) 127, 171
AgsI TTSAA 3 cut(s) 36, 178, 296
AluBI AGCT 4 cut(s) 22, 40, 66, 143
AluI AGCT 4 cut(s) 22, 40, 66, 143
AlwI GGATC 1 cut(s) 282
ApeKI GCWGC 2 cut(s) 12, 29
AsiGI ACCGGT 2 cut(s) 127, 171
AspLEI GCGC 1 cut(s) 81
AsuHPI GGTGA 1 cut(s) 142
BaeI ACNNNNGTAYC 2 cut(s) 207, 240
BbvI GCAGC 2 cut(s) 16, 24
BccI CCATC 1 cut(s) 203
BciVI GTATCC 1 cut(s) 208
BfuAI ACCTGC 1 cut(s) 34
BfuI GTATCC 1 cut(s) 208
BisI GCNGC 2 cut(s) 13, 30
BlsI GCNGC 2 cut(s) 14, 31
BmsI GCATC 1 cut(s) 342
BpmI CTGGAG 1 cut(s) 165
BsaWI WCCGGW 3 cut(s) 127, 171, 196
Bse118I RCCGGY 2 cut(s) 127, 171
Bse1I ACTGG 1 cut(s) 62
BseNI ACTGG 1 cut(s) 62
BseRI GAGGAG 2 cut(s) 32, 35
BseXI GCAGC 2 cut(s) 16, 24
Bsh1236I CGCG 1 cut(s) 81
BshTI ACCGGT 2 cut(s) 127, 171
BsiSI CCGG 3 cut(s) 128, 172, 197
BsiWI CGTACG 1 cut(s) 114
Bsp143I GATC 1 cut(s) 274
BspACI CCGC 1 cut(s) 85
BspFNI CGCG 1 cut(s) 81
BspMI ACCTGC 1 cut(s) 34
BspPI GGATC 1 cut(s) 282
BsrFI RCCGGY 2 cut(s) 127, 171
BsrI ACTGG 1 cut(s) 62
BssAI RCCGGY 2 cut(s) 127, 171
BssMI GATC 1 cut(s) 274
Bst4CI ACNGT 2 cut(s) 220, 289
Bst6I CTCTTC 1 cut(s) 189
BstDEI CTNAG 1 cut(s) 315
BstFNI CGCG 1 cut(s) 81
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 1 cut(s) 277
BstMBI GATC 1 cut(s) 274
BstMWI GCNNNNNNNGC 1 cut(s) 78
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 2 cut(s) 16, 24
BsuI GTATCC 1 cut(s) 208
BveI ACCTGC 1 cut(s) 34
CfoI GCGC 1 cut(s) 81
Cfr10I RCCGGY 2 cut(s) 127, 171
CseI GACGC 1 cut(s) 70
Csp6I GTAC 3 cut(s) 115, 121, 335
CspAI ACCGGT 2 cut(s) 127, 171
CviJI RGCY 4 cut(s) 22, 40, 66, 143
CviKI_1 RGCY 4 cut(s) 22, 40, 66, 143
CviQI GTAC 3 cut(s) 115, 121, 335
DdeI CTNAG 1 cut(s) 315
DpnI GATC 1 cut(s) 276
DpnII GATC 1 cut(s) 274
Eam1104I CTCTTC 1 cut(s) 189
EarI CTCTTC 1 cut(s) 189
FaiI YATR 1 cut(s) 342
Fnu4HI GCNGC 2 cut(s) 13, 30
Fsp4HI GCNGC 2 cut(s) 13, 30
GlaI GCGC 1 cut(s) 80
GluI GCNGC 2 cut(s) 13, 30
GsuI CTGGAG 1 cut(s) 165
HapII CCGG 3 cut(s) 128, 172, 197
HgaI GACGC 1 cut(s) 70
HhaI GCGC 1 cut(s) 81
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HinfI GANTC 3 cut(s) 5, 178, 230
HpaII CCGG 3 cut(s) 128, 172, 197
HphI GGTGA 1 cut(s) 142
Hpy166II GTNNAC 2 cut(s) 133, 285
Hpy188I TCNGA 1 cut(s) 229
Hpy8I GTNNAC 2 cut(s) 133, 285
HpyAV CCTTC 1 cut(s) 290
HpyCH4III ACNGT 2 cut(s) 220, 289
HpyF10VI GCNNNNNNNGC 1 cut(s) 78
HpyF3I CTNAG 1 cut(s) 315
HspAI GCGC 1 cut(s) 79
Kzo9I GATC 1 cut(s) 274
LmnI GCTCC 1 cut(s) 45
Lsp1109I GCAGC 2 cut(s) 16, 24
LweI GCATC 1 cut(s) 342
MalI GATC 1 cut(s) 276
MboI GATC 1 cut(s) 274
MboII GAAGA 1 cut(s) 176
MluCI AATT 1 cut(s) 258
MlyI GAGTC 1 cut(s) 224
MnlI CCTC 4 cut(s) 53, 56, 192, 322
MseI TTAA 2 cut(s) 102, 168
MspA1I CMGCKG 1 cut(s) 143
MspI CCGG 3 cut(s) 128, 172, 197
MvnI CGCG 1 cut(s) 81
MwoI GCNNNNNNNGC 1 cut(s) 78
NdeII GATC 1 cut(s) 274
PfeI GAWTC 2 cut(s) 5, 178
Pfl23II CGTACG 1 cut(s) 114
PinAI ACCGGT 2 cut(s) 127, 171
PkrI GCNGC 2 cut(s) 14, 31
PleI GAGTC 1 cut(s) 224
PpsI GAGTC 1 cut(s) 224
PspLI CGTACG 1 cut(s) 114
PsrI GAACNNNNNNTAC 2 cut(s) 327, 359
PvuII CAGCTG 1 cut(s) 143
RsaI GTAC 3 cut(s) 116, 122, 336
RsaNI GTAC 3 cut(s) 115, 121, 335
SaqAI TTAA 2 cut(s) 102, 168
SatI GCNGC 2 cut(s) 13, 30
Sau3AI GATC 1 cut(s) 274
SchI GAGTC 1 cut(s) 224
SetI ASST 7 cut(s) 24, 28, 42, 68, 138, 145, 301
SfaNI GCATC 1 cut(s) 342
Sse9I AATT 1 cut(s) 258
SsiI CCGC 1 cut(s) 85
TaaI ACNGT 2 cut(s) 220, 289
TaqI TCGA 1 cut(s) 207
TasI AATT 1 cut(s) 258
TatI WGTACW 1 cut(s) 120
TfiI GAWTC 2 cut(s) 5, 178
Tru1I TTAA 2 cut(s) 102, 168
Tru9I TTAA 2 cut(s) 102, 168
TseI GCWGC 2 cut(s) 12, 29
TspDTI ATGAA 1 cut(s) 176
TspGWI ACGGA 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.