Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007528

Physical Location & Seq

Genomic Coordinates Reverse (-)

20207506 .. 20211220

Gene Structure 3715 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G145300.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 696 bp

ATGGAAGCCAGCAGCGAGCAGCAGAAAAAGTCGGAAAATTCATCATCGTCTTCTTCTTCAAAGCTCCTGCTCTACTCCTACTGGCAGAGCTCCTGCTCTTGGCGCGTCCGCTTCGCTCTAAGTCTTAAAGGACTTCCGTACGAGTACAAACCAGTGAACATAAGAAAAGGAGAGCAGTTCAGTCCAGACTTTAAGCGTTTGAATCCTCTTCATTTTGTCCCGGTGTTGGTCGATGGTGGCATAGTGGTGTCAGACTCCCACGCAATATTACAGTATCTGGAGGACAAGTATCCACAGAGACCGTTGTTGCCTGCTGACCCTCGGCTAAAAGCTCTTAATCTCCAGGCTGCAAGCGTTATCAACTCTAATATACAGCCTCTTCACATGTTGTCGGTGCTGAAACATCTTGAGGAAAAGGTTGGTCCTGAAGAGTCACTATCATTTGCTCAGTTGAATATAGAAAAAGGCTTACTCGCTCTTGAGATGTTGCTGAAGGATTTTGCTAGCAGATATGCCACAGGAGATGAAGTGTATATGGCTGATGTGTTCTTAGCTCCACAGATTGCTGTATCTACTACAAGGTTCAACATTAACATGTCCAAATTCCCCACTTTAAGTAGGCTGTATGAATCCTACAAGATTTTACCGGAGTTGGAAGCTTCGTCACCAGAAAGGCAACCTGATGCTGTGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

GST_C_2 GST_C_3 GST_N_2 GST_N_3

Protein Analysis

232

Amino Acids

26.1

Weight (kDa)

6.92

Isoelectric Point (pI)

60.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007528)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g11880 FvH4_7g11880 FvH4_7g11880 FvH4_7g11880 FvH4_7g11880 FvH4_7g11880
malus_domestica	MD02G1204200.v1.1 MD07G1121100.v1.1
prunus_persica	Prupe.2G145300_v2.0.a1 Prupe.2G145300_v2.0.a1 Prupe.2G145300_v2.0.a1
pyrus_communis	pycom02g16660
rosa_chinensis	RchiOBHm_Chr1g0350551
rosa_laevigata	RLG00000028476
rosa_multiflora	Rmu_sc0009041.1_g000005
rosa_roxburghii	Rroxscaffold_4G00304750
rosa_rugosa	Rorug01G0211800 Rorug01G0211900 Rorug01G0212000 Rorug01G0212100
rosa_samantha	Rh1AG226600 Rh1BG195100 Rh1CG211400 Rh1DG223300
rosa_wichuraiana	Rw1G019580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	105
AciI	CCGC	1 cut(s)	109
AcsI	RAATTY	2 cut(s)	37, 602
AcuI	CTGAAG	2 cut(s)	447, 512
AfaI	GTAC	2 cut(s)	140, 146
AfiI	CCNNNNNNNGG	2 cut(s)	99, 226
AflIII	ACRYGT	2 cut(s)	384, 594
AgsI	TTSAA	4 cut(s)	60, 202, 454, 586
AjnI	CCWGG	1 cut(s)	342
AluBI	AGCT	5 cut(s)	64, 90, 332, 554, 659
AluI	AGCT	5 cut(s)	64, 90, 332, 554, 659
Alw21I	GWGCWC	1 cut(s)	92
Alw26I	GTCTC	1 cut(s)	292
AlwNI	CAGNNNCTG	1 cut(s)	277
ApeKI	GCWGC	3 cut(s)	12, 19, 347
ApoI	RAATTY	2 cut(s)	37, 602
AspLEI	GCGC	1 cut(s)	105
AspS9I	GGNCC	1 cut(s)	422
AsuC2I	CCSGG	1 cut(s)	221
AsuHPI	GGTGA	1 cut(s)	657
AsuNHI	GCTAGC	1 cut(s)	503
AvaII	GGWCC	1 cut(s)	422
BanII	GRGCYC	1 cut(s)	92
BbsI	GAAGAC	1 cut(s)	42
Bbv12I	GWGCWC	1 cut(s)	92
BbvI	GCAGC	3 cut(s)	24, 31, 334
BccI	CCATC	1 cut(s)	227
BciT130I	CCWGG	1 cut(s)	344
BciVI	GTATCC	1 cut(s)	300
BcnI	CCSGG	1 cut(s)	221
BcoDI	GTCTC	1 cut(s)	292
BfaI	CTAG	1 cut(s)	504
BfuI	GTATCC	1 cut(s)	300
BisI	GCNGC	3 cut(s)	13, 20, 348
BlsI	GCNGC	3 cut(s)	14, 21, 349
Bme1390I	CCNGG	2 cut(s)	221, 344
Bme18I	GGWCC	1 cut(s)	422
BmgT120I	GGNCC	1 cut(s)	422
BmrFI	CCNGG	2 cut(s)	221, 344
BmsI	GCATC	1 cut(s)	673
BmtI	GCTAGC	1 cut(s)	507
BpiI	GAAGAC	1 cut(s)	42
BpmI	CTGGAG	2 cut(s)	299, 326
BpuEI	CTTGAG	2 cut(s)	428, 500
BpuMI	CCSGG	1 cut(s)	221
BsaI	GGTCTC	1 cut(s)	292
BsaJI	CCNNGG	1 cut(s)	320
BsaWI	WCCGGW	1 cut(s)	646
BsaXI	ACNNNNNCTCC	4 cut(s)	272, 302, 513, 543
Bsc4I	CCNNNNNNNGG	2 cut(s)	99, 226
Bse1I	ACTGG	2 cut(s)	86, 152
BseBI	CCWGG	1 cut(s)	344
BseDI	CCNNGG	1 cut(s)	320
BseLI	CCNNNNNNNGG	2 cut(s)	99, 226
BseMII	CTCAG	1 cut(s)	461
BseNI	ACTGG	2 cut(s)	86, 152
BseXI	GCAGC	3 cut(s)	24, 31, 334
Bsh1236I	CGCG	1 cut(s)	105
BsiHKAI	GWGCWC	1 cut(s)	92
BsiSI	CCGG	2 cut(s)	221, 647
BsiWI	CGTACG	1 cut(s)	138
BslFI	GGGAC	1 cut(s)	203
BslI	CCNNNNNNNGG	2 cut(s)	99, 226
BsmAI	GTCTC	1 cut(s)	292
BsmFI	GGGAC	1 cut(s)	203
Bso31I	GGTCTC	1 cut(s)	292
Bsp1286I	GDGCHC	1 cut(s)	92
BspACI	CCGC	1 cut(s)	109
BspCNI	CTCAG	1 cut(s)	460
BspFNI	CGCG	1 cut(s)	105
BspOI	GCTAGC	1 cut(s)	507
BspTNI	GGTCTC	1 cut(s)	292
BsrI	ACTGG	2 cut(s)	86, 152
BssECI	CCNNGG	1 cut(s)	320
Bst2UI	CCWGG	1 cut(s)	344
Bst4CI	ACNGT	2 cut(s)	273, 303
Bst6I	CTCTTC	3 cut(s)	213, 384, 423
BstC8I	GCNNGC	5 cut(s)	10, 17, 312, 352, 505
BstDEI	CTNAG	3 cut(s)	119, 447, 550
BstFNI	CGCG	1 cut(s)	105
BstHHI	GCGC	1 cut(s)	105
BstMAI	GTCTC	1 cut(s)	292
BstMWI	GCNNNNNNNGC	1 cut(s)	102
BstNI	CCWGG	1 cut(s)	344
BstNSI	RCATGY	2 cut(s)	388, 598
BstSCI	CCNGG	2 cut(s)	219, 342
BstUI	CGCG	1 cut(s)	105
BstV1I	GCAGC	3 cut(s)	24, 31, 334
BstV2I	GAAGAC	1 cut(s)	42
BsuI	GTATCC	1 cut(s)	300
BtsIMutI	CAGTG	1 cut(s)	159
Cac8I	GCNNGC	5 cut(s)	10, 17, 312, 352, 505
CaiI	CAGNNNCTG	1 cut(s)	277
CfoI	GCGC	1 cut(s)	105
Cfr13I	GGNCC	1 cut(s)	422
CseI	GACGC	1 cut(s)	94
Csp6I	GTAC	2 cut(s)	139, 145
CviAII	CATG	2 cut(s)	385, 595
CviQI	GTAC	2 cut(s)	139, 145
DdeI	CTNAG	3 cut(s)	119, 447, 550
Eam1104I	CTCTTC	3 cut(s)	213, 384, 423
EarI	CTCTTC	3 cut(s)	213, 384, 423
Ecl136II	GAGCTC	1 cut(s)	90
Eco24I	GRGCYC	1 cut(s)	92
Eco31I	GGTCTC	1 cut(s)	292
Eco47I	GGWCC	1 cut(s)	422
Eco53kI	GAGCTC	1 cut(s)	90
Eco57I	CTGAAG	2 cut(s)	447, 512
EcoICRI	GAGCTC	1 cut(s)	90
EcoRII	CCWGG	1 cut(s)	342
EcoT38I	GRGCYC	1 cut(s)	92
FaeI	CATG	2 cut(s)	388, 598
FaqI	GGGAC	1 cut(s)	203
FatI	CATG	2 cut(s)	384, 594
Fnu4HI	GCNGC	3 cut(s)	13, 20, 348
FriOI	GRGCYC	1 cut(s)	92
Fsp4HI	GCNGC	3 cut(s)	13, 20, 348
FspBI	CTAG	1 cut(s)	504
GlaI	GCGC	1 cut(s)	104
GluI	GCNGC	3 cut(s)	13, 20, 348
GsuI	CTGGAG	2 cut(s)	299, 326
HapII	CCGG	2 cut(s)	221, 647
HgaI	GACGC	1 cut(s)	94
HhaI	GCGC	1 cut(s)	105
Hin1II	CATG	2 cut(s)	388, 598
Hin6I	GCGC	1 cut(s)	103
HinP1I	GCGC	1 cut(s)	103
HindIII	AAGCTT	1 cut(s)	657
HinfI	GANTC	4 cut(s)	202, 254, 431, 629
HpaII	CCGG	2 cut(s)	221, 647
HphI	GGTGA	1 cut(s)	657
Hpy166II	GTNNAC	1 cut(s)	157
Hpy188I	TCNGA	2 cut(s)	34, 253
Hpy188III	TCNNGA	5 cut(s)	185, 278, 407, 425, 479
Hpy8I	GTNNAC	1 cut(s)	157
HpyAV	CCTTC	1 cut(s)	487
HpyCH4III	ACNGT	2 cut(s)	273, 303
HpyCH4V	TGCA	1 cut(s)	350
HpyF10VI	GCNNNNNNNGC	1 cut(s)	102
HpyF3I	CTNAG	3 cut(s)	119, 447, 550
Hsp92II	CATG	2 cut(s)	388, 598
HspAI	GCGC	1 cut(s)	103
LmnI	GCTCC	3 cut(s)	69, 95, 559
Lsp1109I	GCAGC	3 cut(s)	24, 31, 334
LweI	GCATC	1 cut(s)	673
MaeI	CTAG	1 cut(s)	504
MaeIII	GTNAC	2 cut(s)	432, 663
MboII	GAAGA	6 cut(s)	42, 45, 48, 200, 371, 440
MhlI	GDGCHC	1 cut(s)	92
MluCI	AATT	2 cut(s)	37, 602
MlyI	GAGTC	2 cut(s)	248, 440
MmeI	TCCRAC	2 cut(s)	12, 633
MnlI	CCTC	5 cut(s)	216, 274, 330, 387, 403
MseI	TTAA	6 cut(s)	126, 192, 336, 591, 614, 694
MslI	CAYNNNNRTG	2 cut(s)	245, 593
MspI	CCGG	2 cut(s)	221, 647
MspR9I	CCNGG	2 cut(s)	221, 344
MvaI	CCWGG	1 cut(s)	344
MvnI	CGCG	1 cut(s)	105
MwoI	GCNNNNNNNGC	1 cut(s)	102
NciI	CCSGG	1 cut(s)	221
NheI	GCTAGC	1 cut(s)	503
NlaIII	CATG	2 cut(s)	388, 598
NmeAIII	GCCGAG	1 cut(s)	301
NmuCI	GTSAC	2 cut(s)	432, 663
NspI	RCATGY	2 cut(s)	388, 598
PciI	ACATGT	2 cut(s)	384, 594
PfeI	GAWTC	2 cut(s)	202, 629
Pfl23II	CGTACG	1 cut(s)	138
PkrI	GCNGC	3 cut(s)	14, 21, 349
PleI	GAGTC	2 cut(s)	248, 439
PpsI	GAGTC	2 cut(s)	248, 439
PscI	ACATGT	2 cut(s)	384, 594
Psp124BI	GAGCTC	1 cut(s)	92
Psp6I	CCWGG	1 cut(s)	342
PspGI	CCWGG	1 cut(s)	342
PspLI	CGTACG	1 cut(s)	138
PspPI	GGNCC	1 cut(s)	422
PstNI	CAGNNNCTG	1 cut(s)	277
RsaI	GTAC	2 cut(s)	140, 146
RsaNI	GTAC	2 cut(s)	139, 145
RseI	CAYNNNNRTG	2 cut(s)	245, 593
SacI	GAGCTC	1 cut(s)	92
SaqAI	TTAA	6 cut(s)	126, 192, 336, 591, 614, 694
SatI	GCNGC	3 cut(s)	13, 20, 348
Sau96I	GGNCC	1 cut(s)	422
SchI	GAGTC	2 cut(s)	248, 440
ScrFI	CCNGG	2 cut(s)	221, 344
SduI	GDGCHC	1 cut(s)	92
SetI	ASST	8 cut(s)	66, 92, 334, 420, 556, 584, 661, 682
SfaNI	GCATC	1 cut(s)	673
SinI	GGWCC	1 cut(s)	422
SmiMI	CAYNNNNRTG	2 cut(s)	245, 593
SmlI	CTYRAG	2 cut(s)	407, 479
SmoI	CTYRAG	2 cut(s)	407, 479
Sse9I	AATT	2 cut(s)	37, 602
SsiI	CCGC	1 cut(s)	109
SspI	AATATT	1 cut(s)	267
SspMI	CTAG	1 cut(s)	504
SstI	GAGCTC	1 cut(s)	92
StyD4I	CCNGG	2 cut(s)	219, 342
TaaI	ACNGT	2 cut(s)	273, 303
TaqI	TCGA	1 cut(s)	231
TasI	AATT	2 cut(s)	37, 602
TatI	WGTACW	1 cut(s)	144
TfiI	GAWTC	2 cut(s)	202, 629
Tru1I	TTAA	6 cut(s)	126, 192, 336, 591, 614, 694
Tru9I	TTAA	6 cut(s)	126, 192, 336, 591, 614, 694
TscAI	CASTG	1 cut(s)	159
TseFI	GTSAC	2 cut(s)	432, 663
TseI	GCWGC	3 cut(s)	12, 19, 347
Tsp45I	GTSAC	2 cut(s)	432, 663
TspDTI	ATGAA	4 cut(s)	30, 200, 540, 642
TspGWI	ACGGA	1 cut(s)	126
TspRI	CASTG	1 cut(s)	159
VpaK11BI	GGWCC	1 cut(s)	422
XapI	RAATTY	2 cut(s)	37, 602
XceI	RCATGY	2 cut(s)	388, 598
XspI	CTAG	1 cut(s)	504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.