Rh1DG223300

Glutathione S-transferase zeta class-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0007528
Physical Location & Seq
Reverse (-)
43344659 .. 43353814
9156 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG223300.1

Sequence Viewer

Length: 963 bp
ATGTCGTCGTCTTCCTCGTTTCACTGTCAGATTGTCAATCAGTTCAGCAACTATTCAACCCTGTACAAGTTACGACCAAAATCCACGTCGCTGTCTGGAAATAGAAAGAAGAAAAAAATGAAATTCTACCACAATCCCAGCCATCTTCACTCCTTAGTCTCCTCCATCATCAAAAGCTCCAGGAGAACCCAGTTGAACAACTTCACCAGGTGCTTCACTACTCGTGTCGGGTATGAGAGTCCACGCACAAGTCGACCCATGGATTCCAGCAAGCTCCAGAAAAATACAGAAGCTTCATATTCATCTTCTTCAAAGCTGGTGCTCTATTCCTACTGGCAGAGCTCATGCTCTTGGCGAGTTCGCTTCGCTCTAAACCTTAAAGGGCTTTCGTACGAGTACAAACCGGTGAACCTAGCGAACAGAGAGCAGTTTAATCCAGACTTTGAGCGTCTGAATCCTCTGCATTATGTTCCGGTGTTGGTTGATGGTGACACCGTGATTTCAGACTCCTATGCAATATTTCTGGTTAGTGTAATTTCTCAGGAAAAGTACCCTCAGAGACCTTTATTACCTGCTGACCCTCGGCTAAAAGCTCTTAACCTCCAGGGTGCAAGCATTATCAGCTCTAGTATACAGCCTCTTCACATGCTATCAATGCTGAAGTACATTGAGGAAAAGATTGGTCCTGAAGAGAGCCTGTCATGGGCTCAATTGCATATAGAAAAAGGTTTCTGTGCACTTGAGAAGTTGCTGAAGGATTTTGCTAGCAGATTTGCCACAGGAAATGAAGTGTATATGACTGACGTGTTCTTAGCACCACAGATTGCTATAGCTACAGCAAGGTTCAATATAAACATGTCCACATTCCCCAGTTTAAGTAGGGTGAATGAATCATACAAGGGTTTACCAGAATTCCAAGCTTCATCACCGGAAAGGCAACCTGATGCTGTGCATGGGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120
Pfam Domains
Protein Families
GST_C_2 GST_C_3 GST_N_2 GST_N_3

Protein Analysis

320

Amino Acids

36.41

Weight (kDa)

9.57

Isoelectric Point (pI)

53.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 105 - 174 4.2e-14 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 108 - 174 3.9e-13 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 114 - 173 4.4e-15 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 580
AccI GTMKAC 2 cut(s) 253, 631
AcsI RAATTY 2 cut(s) 122, 911
AcuI CTGAAG 3 cut(s) 680, 708, 773
AdeI CACNNNGTG 1 cut(s) 210
AfaI GTAC 5 cut(s) 65, 392, 398, 551, 665
AfiI CCNNNNNNNGG 1 cut(s) 703
AflIII ACRYGT 2 cut(s) 804, 855
AgeI ACCGGT 1 cut(s) 403
AgsI TTSAA 4 cut(s) 57, 196, 312, 847
AjiI CACGTC 2 cut(s) 87, 805
AjnI CCWGG 3 cut(s) 179, 206, 603
AluBI AGCT 9 cut(s) 177, 274, 293, 316, 342, 593, 624, 833, 920
AluI AGCT 9 cut(s) 177, 274, 293, 316, 342, 593, 624, 833, 920
Alw21I GWGCWC 3 cut(s) 324, 344, 739
Alw26I GTCTC 2 cut(s) 163, 553
Alw44I GTGCAC 1 cut(s) 735
ApaLI GTGCAC 1 cut(s) 735
ApoI RAATTY 2 cut(s) 122, 911
ArsI GACNNNNNNTTYG 2 cut(s) 71, 103
AsiGI ACCGGT 1 cut(s) 403
Asp700I GAANNNNTTC 1 cut(s) 200
AspS9I GGNCC 1 cut(s) 683
AsuHPI GGTGA 5 cut(s) 196, 418, 500, 895, 918
AsuNHI GCTAGC 1 cut(s) 764
AvaII GGWCC 1 cut(s) 683
BaeGI GKGCMC 1 cut(s) 739
BanII GRGCYC 2 cut(s) 344, 709
BauI CACGAG 1 cut(s) 222
BbsI GAAGAC 1 cut(s) 3
Bbv12I GWGCWC 3 cut(s) 324, 344, 739
BccI CCATC 3 cut(s) 150, 173, 479
BciT130I CCWGG 3 cut(s) 181, 208, 605
BcoDI GTCTC 2 cut(s) 163, 553
BfaI CTAG 3 cut(s) 413, 627, 765
BfmI CTRYAG 2 cut(s) 828, 834
BfuAI ACCTGC 1 cut(s) 580
Bme1390I CCNGG 3 cut(s) 181, 208, 605
Bme18I GGWCC 1 cut(s) 683
BmgBI CACGTC 2 cut(s) 87, 805
BmgT120I GGNCC 1 cut(s) 683
BmrFI CCNGG 3 cut(s) 181, 208, 605
BmrI ACTGGG 2 cut(s) 184, 864
BmsI GCATC 1 cut(s) 934
BmtI GCTAGC 1 cut(s) 768
BmuI ACTGGG 2 cut(s) 184, 864
BpiI GAAGAC 1 cut(s) 3
BpmI CTGGAG 3 cut(s) 163, 260, 587
BpuEI CTTGAG 1 cut(s) 761
BsaI GGTCTC 1 cut(s) 553
BsaJI CCNNGG 3 cut(s) 258, 581, 604
BsaWI WCCGGW 3 cut(s) 403, 472, 928
Bsc4I CCNNNNNNNGG 1 cut(s) 703
Bse118I RCCGGY 1 cut(s) 403
Bse1I ACTGG 3 cut(s) 190, 338, 870
BseBI CCWGG 3 cut(s) 181, 208, 605
BseDI CCNNGG 3 cut(s) 258, 581, 604
BseLI CCNNNNNNNGG 1 cut(s) 703
BseMII CTCAG 2 cut(s) 554, 569
BseNI ACTGG 3 cut(s) 190, 338, 870
BseRI GAGGAG 1 cut(s) 151
BseSI GKGCMC 1 cut(s) 739
BseYI CCCAGC 1 cut(s) 137
BshTI ACCGGT 1 cut(s) 403
BsiHKAI GWGCWC 3 cut(s) 324, 344, 739
BsiSI CCGG 3 cut(s) 404, 473, 929
BsiWI CGTACG 1 cut(s) 390
BslI CCNNNNNNNGG 1 cut(s) 703
BsmAI GTCTC 2 cut(s) 163, 553
Bso31I GGTCTC 1 cut(s) 553
Bsp1286I GDGCHC 4 cut(s) 324, 344, 709, 739
Bsp1407I TGTACA 1 cut(s) 63
Bsp19I CCATGG 1 cut(s) 258
BspCNI CTCAG 2 cut(s) 553, 568
BspMI ACCTGC 1 cut(s) 580
BspOI GCTAGC 1 cut(s) 768
BspTNI GGTCTC 1 cut(s) 553
BsrFI RCCGGY 1 cut(s) 403
BsrGI TGTACA 1 cut(s) 63
BsrI ACTGG 3 cut(s) 190, 338, 870
BssAI RCCGGY 1 cut(s) 403
BssECI CCNNGG 3 cut(s) 258, 581, 604
BssNAI GTATAC 1 cut(s) 632
BssSI CACGAG 1 cut(s) 222
BssT1I CCWWGG 1 cut(s) 258
Bst1107I GTATAC 1 cut(s) 632
Bst2BI CACGAG 1 cut(s) 222
Bst2UI CCWGG 3 cut(s) 181, 208, 605
Bst4CI ACNGT 2 cut(s) 26, 496
Bst6I CTCTTC 2 cut(s) 645, 684
BstAUI TGTACA 1 cut(s) 63
BstC8I GCNNGC 3 cut(s) 272, 613, 766
BstDEI CTNAG 4 cut(s) 154, 540, 555, 811
BstDSI CCRYGG 1 cut(s) 258
BstMAI GTCTC 2 cut(s) 163, 553
BstMWI GCNNNNNNNGC 2 cut(s) 621, 655
BstNI CCWGG 3 cut(s) 181, 208, 605
BstNSI RCATGY 2 cut(s) 649, 859
BstSCI CCNGG 3 cut(s) 179, 206, 603
BstSFI CTRYAG 2 cut(s) 828, 834
BstSLI GKGCMC 1 cut(s) 739
BstV2I GAAGAC 1 cut(s) 3
BstZ17I GTATAC 1 cut(s) 632
BtgI CCRYGG 1 cut(s) 258
BtrI CACGTC 2 cut(s) 87, 805
BtsIMutI CAGTG 1 cut(s) 22
BveI ACCTGC 1 cut(s) 580
Cac8I GCNNGC 3 cut(s) 272, 613, 766
Cfr10I RCCGGY 1 cut(s) 403
Cfr13I GGNCC 1 cut(s) 683
CseI GACGC 1 cut(s) 437
CsiI ACCWGGT 1 cut(s) 206
Csp6I GTAC 5 cut(s) 64, 391, 397, 550, 664
CspAI ACCGGT 1 cut(s) 403
CviAII CATG 6 cut(s) 259, 345, 646, 702, 856, 953
CviQI GTAC 5 cut(s) 64, 391, 397, 550, 664
DdeI CTNAG 4 cut(s) 154, 540, 555, 811
DraIII CACNNNGTG 1 cut(s) 210
Eam1104I CTCTTC 2 cut(s) 645, 684
EarI CTCTTC 2 cut(s) 645, 684
Ecl136II GAGCTC 1 cut(s) 342
Eco130I CCWWGG 1 cut(s) 258
Eco24I GRGCYC 2 cut(s) 344, 709
Eco31I GGTCTC 1 cut(s) 553
Eco47I GGWCC 1 cut(s) 683
Eco53kI GAGCTC 1 cut(s) 342
Eco57I CTGAAG 3 cut(s) 680, 708, 773
EcoICRI GAGCTC 1 cut(s) 342
EcoRI GAATTC 1 cut(s) 911
EcoRII CCWGG 3 cut(s) 179, 206, 603
EcoT14I CCWWGG 1 cut(s) 258
EcoT38I GRGCYC 2 cut(s) 344, 709
ErhI CCWWGG 1 cut(s) 258
FaeI CATG 6 cut(s) 262, 348, 649, 705, 859, 956
FatI CATG 6 cut(s) 258, 344, 645, 701, 855, 952
FblI GTMKAC 2 cut(s) 253, 631
FriOI GRGCYC 2 cut(s) 344, 709
FspBI CTAG 3 cut(s) 413, 627, 765
GsaI CCCAGC 1 cut(s) 141
GsuI CTGGAG 3 cut(s) 163, 260, 587
HapII CCGG 3 cut(s) 404, 473, 929
HgaI GACGC 1 cut(s) 437
Hin1II CATG 6 cut(s) 262, 348, 649, 705, 859, 956
HincII GTYRAC 1 cut(s) 254
HindII GTYRAC 1 cut(s) 254
HindIII AAGCTT 2 cut(s) 291, 918
HinfI GANTC 5 cut(s) 238, 263, 454, 506, 890
HpaII CCGG 3 cut(s) 404, 473, 929
HphI GGTGA 5 cut(s) 196, 418, 500, 895, 918
Hpy166II GTNNAC 7 cut(s) 242, 254, 409, 632, 737, 861, 905
Hpy188I TCNGA 4 cut(s) 30, 453, 505, 558
Hpy188III TCNNGA 5 cut(s) 96, 277, 437, 542, 686
Hpy8I GTNNAC 7 cut(s) 242, 254, 409, 632, 737, 861, 905
Hpy99I CGWCG 2 cut(s) 10, 91
HpyAV CCTTC 1 cut(s) 748
HpyCH4III ACNGT 2 cut(s) 26, 496
HpyCH4IV ACGT 2 cut(s) 86, 804
HpyCH4V TGCA 6 cut(s) 463, 515, 611, 715, 737, 952
HpyF10VI GCNNNNNNNGC 2 cut(s) 621, 655
HpyF3I CTNAG 4 cut(s) 154, 540, 555, 811
HpySE526I ACGT 2 cut(s) 86, 804
Hsp92II CATG 6 cut(s) 262, 348, 649, 705, 859, 956
LmnI GCTCC 2 cut(s) 182, 279
LweI GCATC 1 cut(s) 934
MabI ACCWGGT 1 cut(s) 206
MaeI CTAG 3 cut(s) 413, 627, 765
MaeII ACGT 2 cut(s) 86, 804
MaeIII GTNAC 2 cut(s) 69, 488
MboII GAAGA 7 cut(s) 3, 121, 137, 297, 300, 632, 701
MfeI CAATTG 1 cut(s) 710
MhlI GDGCHC 4 cut(s) 324, 344, 709, 739
MluCI AATT 4 cut(s) 122, 534, 710, 911
MlyI GAGTC 2 cut(s) 247, 500
MnlI CCTC 8 cut(s) 25, 172, 468, 564, 591, 611, 648, 664
MroXI GAANNNNTTC 1 cut(s) 200
MseI TTAA 4 cut(s) 378, 432, 597, 875
MspI CCGG 3 cut(s) 404, 473, 929
MspR9I CCNGG 3 cut(s) 181, 208, 605
MunI CAATTG 1 cut(s) 710
MvaI CCWGG 3 cut(s) 181, 208, 605
MwoI GCNNNNNNNGC 2 cut(s) 621, 655
NcoI CCATGG 1 cut(s) 258
NheI GCTAGC 1 cut(s) 764
NlaIII CATG 6 cut(s) 262, 348, 649, 705, 859, 956
NmeAIII GCCGAG 1 cut(s) 562
NmuCI GTSAC 1 cut(s) 488
NspI RCATGY 2 cut(s) 649, 859
PciI ACATGT 1 cut(s) 855
PcsI WCGNNNNNNNCGW 2 cut(s) 14, 250
PdmI GAANNNNTTC 1 cut(s) 200
PfeI GAWTC 3 cut(s) 263, 454, 890
Pfl23II CGTACG 1 cut(s) 390
PfoI TCCNGGA 1 cut(s) 179
PinAI ACCGGT 1 cut(s) 403
PleI GAGTC 2 cut(s) 246, 500
PpsI GAGTC 2 cut(s) 246, 500
PscI ACATGT 1 cut(s) 855
Psp124BI GAGCTC 1 cut(s) 344
Psp6I CCWGG 3 cut(s) 179, 206, 603
PspFI CCCAGC 1 cut(s) 137
PspGI CCWGG 3 cut(s) 179, 206, 603
PspLI CGTACG 1 cut(s) 390
PspPI GGNCC 1 cut(s) 683
RsaI GTAC 5 cut(s) 65, 392, 398, 551, 665
RsaNI GTAC 5 cut(s) 64, 391, 397, 550, 664
SacI GAGCTC 1 cut(s) 344
SalI GTCGAC 1 cut(s) 252
SaqAI TTAA 4 cut(s) 378, 432, 597, 875
Sau96I GGNCC 1 cut(s) 683
SchI GAGTC 2 cut(s) 247, 500
ScrFI CCNGG 3 cut(s) 181, 208, 605
SduI GDGCHC 4 cut(s) 324, 344, 709, 739
SexAI ACCWGGT 1 cut(s) 206
SfaNI GCATC 1 cut(s) 934
SfcI CTRYAG 2 cut(s) 828, 834
SinI GGWCC 1 cut(s) 683
SmlI CTYRAG 1 cut(s) 740
SmoI CTYRAG 1 cut(s) 740
Sse9I AATT 4 cut(s) 122, 534, 710, 911
SspI AATATT 1 cut(s) 519
SspMI CTAG 3 cut(s) 413, 627, 765
SstI GAGCTC 1 cut(s) 344
StyD4I CCNGG 3 cut(s) 179, 206, 603
StyI CCWWGG 1 cut(s) 258
TaaI ACNGT 2 cut(s) 26, 496
TaiI ACGT 2 cut(s) 89, 807
TaqI TCGA 1 cut(s) 253
TasI AATT 4 cut(s) 122, 534, 710, 911
TatI WGTACW 3 cut(s) 63, 396, 663
TfiI GAWTC 3 cut(s) 263, 454, 890
Tru1I TTAA 4 cut(s) 378, 432, 597, 875
Tru9I TTAA 4 cut(s) 378, 432, 597, 875
TscAI CASTG 1 cut(s) 29
TseFI GTSAC 1 cut(s) 488
Tsp45I GTSAC 1 cut(s) 488
TspDTI ATGAA 6 cut(s) 134, 285, 291, 801, 903, 912
TspRI CASTG 1 cut(s) 29
VneI GTGCAC 1 cut(s) 735
VpaK11BI GGWCC 1 cut(s) 683
XapI RAATTY 2 cut(s) 122, 911
XceI RCATGY 2 cut(s) 649, 859
XmiI GTMKAC 2 cut(s) 253, 631
XmnI GAANNNNTTC 1 cut(s) 200
XspI CTAG 3 cut(s) 413, 627, 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.