Rmu_sc0009041.1_g000005

Glutathione S-transferase zeta class-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009041.1
OG0007528
Physical Location & Seq
Forward (+)
25975 .. 27590
1616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009041.1_g000005.1.cds

Sequence Viewer

Length: 618 bp
atgaaattctaccacaatcccagccatcttcactccttagtctcctccatcatcaaaagctccaagagaacccagttgaacaacttcaccagatgcttcactactcgtgtcgggttcgagagtccacgcacaagtcgacccatggattccagcacgccccaggaaaatacagaagcttcgtattcatcttcttcaaagctggtgctctattcctactggcagagctcatgctcttggcgagttcgcttcgctctaaaccttaaagggctttcgtatgagtacaaaccggtgaacctagcaaaaggagagcagtttaatccagactttgagcgtctgaatcctctgcattatgttccggtgttggttgatggtgacaccgtgatttcggactcctatgcaatatttctgtatctggaggagaagtacccgcagagaccgttattgcctgctgaccctcggctaaaagctcttaacctccagggtgcaagcattatcagctctagtatacagcctctccacatgctatcaatgctgaagtacattgaggaaaagattggtcctgaagagagcctgtcatgggctcaattgcatatagaaaaaggtttctgtggtgagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120
Pfam Domains
Protein Families
GST_C_2 GST_C_3 GST_N_2 GST_N_3

Protein Analysis

205

Amino Acids

23.46

Weight (kDa)

8.36

Isoelectric Point (pI)

51.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 136, 505
AciI CCGC 1 cut(s) 428
AcsI RAATTY 1 cut(s) 5
AcuI CTGAAG 2 cut(s) 554, 582
AfaI GTAC 3 cut(s) 281, 425, 539
AfiI CCNNNNNNNGG 1 cut(s) 577
AgeI ACCGGT 1 cut(s) 286
AgsI TTSAA 2 cut(s) 79, 195
AjnI CCWGG 2 cut(s) 159, 477
AluBI AGCT 6 cut(s) 60, 176, 199, 225, 467, 498
AluI AGCT 6 cut(s) 60, 176, 199, 225, 467, 498
Alw21I GWGCWC 2 cut(s) 207, 227
Alw26I GTCTC 2 cut(s) 46, 427
ApoI RAATTY 1 cut(s) 5
AsiGI ACCGGT 1 cut(s) 286
Asp700I GAANNNNTTC 1 cut(s) 83
AspS9I GGNCC 1 cut(s) 557
AsuHPI GGTGA 3 cut(s) 79, 301, 383
AvaII GGWCC 1 cut(s) 557
BanII GRGCYC 2 cut(s) 227, 583
BauI CACGAG 1 cut(s) 105
Bbv12I GWGCWC 2 cut(s) 207, 227
BccI CCATC 3 cut(s) 33, 56, 362
BciT130I CCWGG 2 cut(s) 161, 479
BcoDI GTCTC 2 cut(s) 46, 427
BfaI CTAG 2 cut(s) 296, 501
Bme1390I CCNGG 2 cut(s) 161, 479
Bme18I GGWCC 1 cut(s) 557
BmgT120I GGNCC 1 cut(s) 557
BmrFI CCNGG 2 cut(s) 161, 479
BmrI ACTGGG 1 cut(s) 67
BmsI GCATC 1 cut(s) 83
BmuI ACTGGG 1 cut(s) 67
BpmI CTGGAG 2 cut(s) 434, 461
BsaI GGTCTC 1 cut(s) 427
BsaJI CCNNGG 4 cut(s) 141, 159, 455, 478
BsaWI WCCGGW 2 cut(s) 286, 355
BsaXI ACNNNNNCTCC 4 cut(s) 407, 437, 498, 528
Bsc4I CCNNNNNNNGG 1 cut(s) 577
Bse118I RCCGGY 1 cut(s) 286
Bse1I ACTGG 2 cut(s) 73, 221
BseBI CCWGG 2 cut(s) 161, 479
BseDI CCNNGG 4 cut(s) 141, 159, 455, 478
BseLI CCNNNNNNNGG 1 cut(s) 577
BseNI ACTGG 2 cut(s) 73, 221
BseRI GAGGAG 2 cut(s) 34, 431
BseYI CCCAGC 1 cut(s) 20
BshTI ACCGGT 1 cut(s) 286
BsiHKAI GWGCWC 2 cut(s) 207, 227
BsiSI CCGG 2 cut(s) 287, 356
BslI CCNNNNNNNGG 1 cut(s) 577
BsmAI GTCTC 2 cut(s) 46, 427
Bso31I GGTCTC 1 cut(s) 427
Bsp1286I GDGCHC 3 cut(s) 207, 227, 583
Bsp19I CCATGG 1 cut(s) 141
BspACI CCGC 1 cut(s) 428
BspTNI GGTCTC 1 cut(s) 427
BsrFI RCCGGY 1 cut(s) 286
BsrI ACTGG 2 cut(s) 73, 221
BssAI RCCGGY 1 cut(s) 286
BssECI CCNNGG 4 cut(s) 141, 159, 455, 478
BssNAI GTATAC 1 cut(s) 506
BssSI CACGAG 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 141
Bst1107I GTATAC 1 cut(s) 506
Bst2BI CACGAG 1 cut(s) 105
Bst2UI CCWGG 2 cut(s) 161, 479
Bst4CI ACNGT 2 cut(s) 379, 438
Bst6I CTCTTC 1 cut(s) 558
BstC8I GCNNGC 3 cut(s) 155, 447, 487
BstDEI CTNAG 1 cut(s) 37
BstDSI CCRYGG 1 cut(s) 141
BstMAI GTCTC 2 cut(s) 46, 427
BstMWI GCNNNNNNNGC 2 cut(s) 495, 529
BstNI CCWGG 2 cut(s) 161, 479
BstNSI RCATGY 1 cut(s) 523
BstSCI CCNGG 2 cut(s) 159, 477
BstZ17I GTATAC 1 cut(s) 506
BtgI CCRYGG 1 cut(s) 141
Cac8I GCNNGC 3 cut(s) 155, 447, 487
Cfr10I RCCGGY 1 cut(s) 286
Cfr13I GGNCC 1 cut(s) 557
CseI GACGC 1 cut(s) 320
Csp6I GTAC 3 cut(s) 280, 424, 538
CspAI ACCGGT 1 cut(s) 286
CviAII CATG 4 cut(s) 142, 228, 520, 576
CviQI GTAC 3 cut(s) 280, 424, 538
DdeI CTNAG 1 cut(s) 37
Eam1104I CTCTTC 1 cut(s) 558
EarI CTCTTC 1 cut(s) 558
Ecl136II GAGCTC 1 cut(s) 225
Eco130I CCWWGG 1 cut(s) 141
Eco24I GRGCYC 2 cut(s) 227, 583
Eco31I GGTCTC 1 cut(s) 427
Eco47I GGWCC 1 cut(s) 557
Eco53kI GAGCTC 1 cut(s) 225
Eco57I CTGAAG 2 cut(s) 554, 582
EcoICRI GAGCTC 1 cut(s) 225
EcoRII CCWGG 2 cut(s) 159, 477
EcoT14I CCWWGG 1 cut(s) 141
EcoT38I GRGCYC 2 cut(s) 227, 583
ErhI CCWWGG 1 cut(s) 141
FaeI CATG 4 cut(s) 145, 231, 523, 579
FatI CATG 4 cut(s) 141, 227, 519, 575
FauI CCCGC 1 cut(s) 435
FblI GTMKAC 2 cut(s) 136, 505
FriOI GRGCYC 2 cut(s) 227, 583
FspBI CTAG 2 cut(s) 296, 501
GsaI CCCAGC 1 cut(s) 24
GsuI CTGGAG 2 cut(s) 434, 461
HapII CCGG 2 cut(s) 287, 356
HgaI GACGC 1 cut(s) 320
Hin1II CATG 4 cut(s) 145, 231, 523, 579
HincII GTYRAC 1 cut(s) 137
HindII GTYRAC 1 cut(s) 137
HindIII AAGCTT 1 cut(s) 174
HinfI GANTC 4 cut(s) 121, 146, 337, 389
HpaII CCGG 2 cut(s) 287, 356
HphI GGTGA 3 cut(s) 79, 301, 383
Hpy166II GTNNAC 4 cut(s) 125, 137, 292, 506
Hpy188I TCNGA 2 cut(s) 336, 388
Hpy188III TCNNGA 4 cut(s) 118, 320, 413, 560
Hpy8I GTNNAC 4 cut(s) 125, 137, 292, 506
HpyCH4III ACNGT 2 cut(s) 379, 438
HpyCH4V TGCA 4 cut(s) 346, 398, 485, 589
HpyF10VI GCNNNNNNNGC 2 cut(s) 495, 529
HpyF3I CTNAG 1 cut(s) 37
Hsp92II CATG 4 cut(s) 145, 231, 523, 579
LmnI GCTCC 1 cut(s) 65
LweI GCATC 1 cut(s) 83
MaeI CTAG 2 cut(s) 296, 501
MaeIII GTNAC 1 cut(s) 371
MboII GAAGA 4 cut(s) 20, 180, 183, 575
MfeI CAATTG 1 cut(s) 584
MhlI GDGCHC 3 cut(s) 207, 227, 583
MluCI AATT 2 cut(s) 5, 584
MlyI GAGTC 2 cut(s) 130, 383
MnlI CCTC 7 cut(s) 55, 351, 409, 465, 485, 522, 538
MroXI GAANNNNTTC 1 cut(s) 83
MseI TTAA 3 cut(s) 261, 315, 471
MspI CCGG 2 cut(s) 287, 356
MspR9I CCNGG 2 cut(s) 161, 479
MunI CAATTG 1 cut(s) 584
MvaI CCWGG 2 cut(s) 161, 479
MwoI GCNNNNNNNGC 2 cut(s) 495, 529
NcoI CCATGG 1 cut(s) 141
NlaIII CATG 4 cut(s) 145, 231, 523, 579
NmeAIII GCCGAG 1 cut(s) 436
NmuCI GTSAC 1 cut(s) 371
NspI RCATGY 1 cut(s) 523
PcsI WCGNNNNNNNCGW 1 cut(s) 133
PdmI GAANNNNTTC 1 cut(s) 83
PfeI GAWTC 2 cut(s) 146, 337
PinAI ACCGGT 1 cut(s) 286
PleI GAGTC 2 cut(s) 129, 383
PpsI GAGTC 2 cut(s) 129, 383
Psp124BI GAGCTC 1 cut(s) 227
Psp6I CCWGG 2 cut(s) 159, 477
PspFI CCCAGC 1 cut(s) 20
PspGI CCWGG 2 cut(s) 159, 477
PspPI GGNCC 1 cut(s) 557
RsaI GTAC 3 cut(s) 281, 425, 539
RsaNI GTAC 3 cut(s) 280, 424, 538
SacI GAGCTC 1 cut(s) 227
SalI GTCGAC 1 cut(s) 135
SaqAI TTAA 3 cut(s) 261, 315, 471
Sau96I GGNCC 1 cut(s) 557
SchI GAGTC 2 cut(s) 130, 383
ScrFI CCNGG 2 cut(s) 161, 479
SduI GDGCHC 3 cut(s) 207, 227, 583
SfaNI GCATC 1 cut(s) 83
SinI GGWCC 1 cut(s) 557
Sse9I AATT 2 cut(s) 5, 584
SsiI CCGC 1 cut(s) 428
SspI AATATT 1 cut(s) 402
SspMI CTAG 2 cut(s) 296, 501
SstI GAGCTC 1 cut(s) 227
StyD4I CCNGG 2 cut(s) 159, 477
StyI CCWWGG 1 cut(s) 141
TaaI ACNGT 2 cut(s) 379, 438
TaqI TCGA 2 cut(s) 117, 136
TasI AATT 2 cut(s) 5, 584
TatI WGTACW 2 cut(s) 279, 537
TfiI GAWTC 2 cut(s) 146, 337
Tru1I TTAA 3 cut(s) 261, 315, 471
Tru9I TTAA 3 cut(s) 261, 315, 471
TseFI GTSAC 1 cut(s) 371
Tsp45I GTSAC 1 cut(s) 371
TspDTI ATGAA 2 cut(s) 17, 174
VpaK11BI GGWCC 1 cut(s) 557
XapI RAATTY 1 cut(s) 5
XceI RCATGY 1 cut(s) 523
XmiI GTMKAC 2 cut(s) 136, 505
XmnI GAANNNNTTC 1 cut(s) 83
XspI CTAG 2 cut(s) 296, 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.