pycom02g16660

Glutathione S-transferase zeta class-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
13905061 .. 13906109
1049 bp
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UTR
Exon/CDS
Intron
pycom02g16660.1

Sequence Viewer

Length: 375 bp
ATGGTATCCAGCAGCAGCAGCAGCAGCAATCAGCTACCTGCTGCTTCAAAGCTCCTCCTCTATTCCTACTGGCAAAGCTCCTGCTCTTGGCGCGTCCGCTTCGCTCTCAATCTTAAAGGACTTCCGTGCGAGTACAAACCGGTGAACCTACCAGCTGGAGAGCAGTTCAGTCCAGAGTTTAAGCGGTTGAATCCTCTTCATTTTGTTCCCGTGTTGGTCGATGGGGATACGGTGGTTTCAGACTCCTTTGCGATATTGCTGGTTAGTGTAATTTGTTGGGAAATGAATCATCTGTTTACAGTTTTTGAAGGTTTTACTTGTGCCTCTAAGTGTTCTGTTATTTGGGTACAATGTGTTCTTGTGATGCTCGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

125

Amino Acids

13.86

Weight (kDa)

6.05

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 17 - 86 3.6e-14 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 20 - 86 1.2e-12 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 26 - 86 1.5e-16 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 46
AccII CGCG 1 cut(s) 93
AciI CCGC 2 cut(s) 97, 184
AfaI GTAC 2 cut(s) 134, 348
AfiI CCNNNNNNNGG 1 cut(s) 87
AgeI ACCGGT 1 cut(s) 139
AgsI TTSAA 3 cut(s) 48, 190, 308
AluBI AGCT 4 cut(s) 34, 52, 78, 155
AluI AGCT 4 cut(s) 34, 52, 78, 155
ApeKI GCWGC 6 cut(s) 12, 15, 18, 21, 24, 41
AsiGI ACCGGT 1 cut(s) 139
AspLEI GCGC 1 cut(s) 93
AsuHPI GGTGA 1 cut(s) 154
BaeI ACNNNNGTAYC 2 cut(s) 219, 252
BbvI GCAGC 6 cut(s) 24, 27, 28, 30, 33, 36
BccI CCATC 1 cut(s) 215
BciVI GTATCC 2 cut(s) 16, 220
BfuAI ACCTGC 1 cut(s) 46
BfuI GTATCC 2 cut(s) 16, 220
BisI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 42
BlsI GCNGC 6 cut(s) 14, 17, 20, 23, 26, 43
BmsI GCATC 1 cut(s) 354
BpmI CTGGAG 1 cut(s) 177
BsaWI WCCGGW 1 cut(s) 139
Bsc4I CCNNNNNNNGG 1 cut(s) 87
Bse118I RCCGGY 1 cut(s) 139
Bse1I ACTGG 1 cut(s) 74
BseLI CCNNNNNNNGG 1 cut(s) 87
BseNI ACTGG 1 cut(s) 74
BseRI GAGGAG 2 cut(s) 44, 47
BseXI GCAGC 6 cut(s) 24, 27, 28, 30, 33, 36
Bsh1236I CGCG 1 cut(s) 93
BshTI ACCGGT 1 cut(s) 139
BsiSI CCGG 1 cut(s) 140
BslI CCNNNNNNNGG 1 cut(s) 87
BspACI CCGC 2 cut(s) 97, 184
BspFNI CGCG 1 cut(s) 93
BspMI ACCTGC 1 cut(s) 46
BsrFI RCCGGY 1 cut(s) 139
BsrI ACTGG 1 cut(s) 74
BssAI RCCGGY 1 cut(s) 139
Bst4CI ACNGT 2 cut(s) 232, 301
Bst6I CTCTTC 1 cut(s) 201
BstDEI CTNAG 1 cut(s) 327
BstFNI CGCG 1 cut(s) 93
BstHHI GCGC 1 cut(s) 93
BstMWI GCNNNNNNNGC 4 cut(s) 18, 21, 24, 90
BstUI CGCG 1 cut(s) 93
BstV1I GCAGC 6 cut(s) 24, 27, 28, 30, 33, 36
BsuI GTATCC 2 cut(s) 16, 220
BveI ACCTGC 1 cut(s) 46
CfoI GCGC 1 cut(s) 93
Cfr10I RCCGGY 1 cut(s) 139
CseI GACGC 1 cut(s) 82
Csp6I GTAC 2 cut(s) 133, 347
CspAI ACCGGT 1 cut(s) 139
CviJI RGCY 4 cut(s) 34, 52, 78, 155
CviKI_1 RGCY 4 cut(s) 34, 52, 78, 155
CviQI GTAC 2 cut(s) 133, 347
DdeI CTNAG 1 cut(s) 327
Eam1104I CTCTTC 1 cut(s) 201
EarI CTCTTC 1 cut(s) 201
Fnu4HI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 42
Fsp4HI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 42
GlaI GCGC 1 cut(s) 92
GluI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 42
GsuI CTGGAG 1 cut(s) 177
HapII CCGG 1 cut(s) 140
HgaI GACGC 1 cut(s) 82
HhaI GCGC 1 cut(s) 93
Hin6I GCGC 1 cut(s) 91
HinP1I GCGC 1 cut(s) 91
HinfI GANTC 3 cut(s) 190, 242, 286
HpaII CCGG 1 cut(s) 140
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 2 cut(s) 145, 297
Hpy188I TCNGA 1 cut(s) 241
Hpy188III TCNNGA 1 cut(s) 173
Hpy8I GTNNAC 2 cut(s) 145, 297
HpyAV CCTTC 1 cut(s) 302
HpyCH4III ACNGT 2 cut(s) 232, 301
HpyF10VI GCNNNNNNNGC 4 cut(s) 18, 21, 24, 90
HpyF3I CTNAG 1 cut(s) 327
HspAI GCGC 1 cut(s) 91
LmnI GCTCC 2 cut(s) 57, 83
LpnPI CCDG 9 cut(s) 22, 51, 55, 94, 141, 153, 165, 186, 245
Lsp1109I GCAGC 6 cut(s) 24, 27, 28, 30, 33, 36
LweI GCATC 1 cut(s) 354
MboII GAAGA 1 cut(s) 188
MluCI AATT 1 cut(s) 270
MlyI GAGTC 1 cut(s) 236
MnlI CCTC 4 cut(s) 65, 68, 204, 334
MseI TTAA 2 cut(s) 114, 180
MspA1I CMGCKG 1 cut(s) 155
MspI CCGG 1 cut(s) 140
MvnI CGCG 1 cut(s) 93
MwoI GCNNNNNNNGC 4 cut(s) 18, 21, 24, 90
PfeI GAWTC 2 cut(s) 190, 286
PinAI ACCGGT 1 cut(s) 139
PkrI GCNGC 6 cut(s) 14, 17, 20, 23, 26, 43
PleI GAGTC 1 cut(s) 236
PpsI GAGTC 1 cut(s) 236
PsrI GAACNNNNNNTAC 2 cut(s) 339, 371
PvuII CAGCTG 1 cut(s) 155
RsaI GTAC 2 cut(s) 134, 348
RsaNI GTAC 2 cut(s) 133, 347
SaqAI TTAA 2 cut(s) 114, 180
SatI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 42
SchI GAGTC 1 cut(s) 236
SetI ASST 7 cut(s) 36, 40, 54, 80, 150, 157, 313
SfaNI GCATC 1 cut(s) 354
Sse9I AATT 1 cut(s) 270
SsiI CCGC 2 cut(s) 97, 184
TaaI ACNGT 2 cut(s) 232, 301
TaqI TCGA 2 cut(s) 219, 369
TasI AATT 1 cut(s) 270
TatI WGTACW 1 cut(s) 132
TfiI GAWTC 2 cut(s) 190, 286
Tru1I TTAA 2 cut(s) 114, 180
Tru9I TTAA 2 cut(s) 114, 180
TseI GCWGC 6 cut(s) 12, 15, 18, 21, 24, 41
TspDTI ATGAA 2 cut(s) 188, 299
TspGWI ACGGA 1 cut(s) 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.