RLG00000028476

Glutathione S-transferase zeta class-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0007528
Physical Location & Seq
Forward (+)
23245869 .. 23249384
3516 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028476

Sequence Viewer

Length: 837 bp
ATGAAATTCTACCACAATCCCAGCCATCTTCACTCCTTAGTCTTCTCCATCATCAAAAGCTGCAAGAGAACCCAGTTGAACAACTTCACCAGGTGCTTCACTACTCGTGTCGGGTTCGACTGTCCACGCATAAGTCGACCCATGGATTCCAGCAAGCACCAGGAAAATACAGAAGCTTCATATTCATCTTCTTCAAAGCTGGTGCTCTATTCCTACTGGCAGAGCTCATGCTCTTGGCGAGTTCGCTTCGCTCTAAACCTTAAAGGGCTTTCGTACGAGTACAAACCGGTGAACCTAGCGAAAGGAGAGCAGTTTAATCCAGACTTTGAGCGTCTGAATCCTCTGCATTATGTTCCGGTGTTGGTTGATGGTGACACCGTGATTTCAGACTCCTATACAATATTTCTGTATCTGGAGGAGAAGTACCCTCAGAGACCGTTATTGCCTGCTGACCCTCGGCTAAAAGCTCTGAACCTCCAGGGGGCAAGCATTATCAGCTCTAGTATACAGCCTCTCCACATGCTATCAATGCTGAAGTACATTGAGGAAAAGATTGGTCCTGAAGAGAGCCTGTCATGGGCTCAATTGCATATAGAAAAAGGTTTCTGTGCACTTGAGAAGTTGCTGAAGGATTTTGCGAGCAGATTTGCCACAGGAAATGAAGTGTATATGACTGACGTGTTCTTAGCACCACAGATTGCTATAGCTACAGCAAGGTTCAATATAAATATGTCCACATTCCCCAGTTTAAGCAGGGTGAATGAATCATACAAGGGTTTACCAGAATTCCAAGCTTCATCACCGGAAAGGCAACCTGATGCTGTGCATGAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120
Pfam Domains
Protein Families
GST_C_2 GST_C_3 GST_N_2 GST_N_3

Protein Analysis

279

Amino Acids

31.84

Weight (kDa)

8.19

Isoelectric Point (pI)

51.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 66 - 139 1.5e-15 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 69 - 146 2.2e-17 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 75 - 140 4.3e-17 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 136, 505
AcsI RAATTY 2 cut(s) 5, 785
AcuI CTGAAG 3 cut(s) 554, 582, 647
AdeI CACNNNGTG 1 cut(s) 93
AfaI GTAC 4 cut(s) 275, 281, 425, 539
AfiI CCNNNNNNNGG 2 cut(s) 481, 577
AflIII ACRYGT 1 cut(s) 678
AgeI ACCGGT 1 cut(s) 286
AgsI TTSAA 3 cut(s) 79, 195, 721
AjiI CACGTC 1 cut(s) 679
AjnI CCWGG 3 cut(s) 89, 159, 477
AluBI AGCT 8 cut(s) 60, 176, 199, 225, 467, 498, 707, 794
AluI AGCT 8 cut(s) 60, 176, 199, 225, 467, 498, 707, 794
Alw21I GWGCWC 3 cut(s) 207, 227, 613
Alw26I GTCTC 1 cut(s) 427
Alw44I GTGCAC 1 cut(s) 609
ApaLI GTGCAC 1 cut(s) 609
ApeKI GCWGC 1 cut(s) 60
ApoI RAATTY 2 cut(s) 5, 785
AsiGI ACCGGT 1 cut(s) 286
Asp700I GAANNNNTTC 1 cut(s) 83
AspS9I GGNCC 1 cut(s) 557
AsuHPI GGTGA 5 cut(s) 79, 301, 383, 769, 792
AvaII GGWCC 1 cut(s) 557
BaeGI GKGCMC 1 cut(s) 613
BanII GRGCYC 2 cut(s) 227, 583
BauI CACGAG 1 cut(s) 105
BbsI GAAGAC 1 cut(s) 34
Bbv12I GWGCWC 3 cut(s) 207, 227, 613
BbvI GCAGC 1 cut(s) 47
BccI CCATC 3 cut(s) 33, 56, 362
BciT130I CCWGG 3 cut(s) 91, 161, 479
BcoDI GTCTC 1 cut(s) 427
BfaI CTAG 2 cut(s) 296, 501
BfmI CTRYAG 2 cut(s) 702, 708
BisI GCNGC 1 cut(s) 61
BlsI GCNGC 1 cut(s) 62
Bme1390I CCNGG 3 cut(s) 91, 161, 479
Bme18I GGWCC 1 cut(s) 557
BmgBI CACGTC 1 cut(s) 679
BmgT120I GGNCC 1 cut(s) 557
BmrFI CCNGG 3 cut(s) 91, 161, 479
BmrI ACTGGG 2 cut(s) 67, 738
BmsI GCATC 1 cut(s) 808
BmuI ACTGGG 2 cut(s) 67, 738
BpiI GAAGAC 1 cut(s) 34
BpmI CTGGAG 2 cut(s) 434, 461
BpuEI CTTGAG 1 cut(s) 635
BsaI GGTCTC 1 cut(s) 427
BsaJI CCNNGG 3 cut(s) 141, 455, 478
BsaWI WCCGGW 3 cut(s) 286, 355, 802
BsaXI ACNNNNNCTCC 4 cut(s) 407, 437, 498, 528
Bsc4I CCNNNNNNNGG 2 cut(s) 481, 577
Bse118I RCCGGY 1 cut(s) 286
Bse1I ACTGG 3 cut(s) 73, 221, 744
BseBI CCWGG 3 cut(s) 91, 161, 479
BseDI CCNNGG 3 cut(s) 141, 455, 478
BseLI CCNNNNNNNGG 2 cut(s) 481, 577
BseMII CTCAG 1 cut(s) 443
BseNI ACTGG 3 cut(s) 73, 221, 744
BseRI GAGGAG 1 cut(s) 431
BseSI GKGCMC 1 cut(s) 613
BseXI GCAGC 1 cut(s) 47
BseYI CCCAGC 1 cut(s) 20
BshTI ACCGGT 1 cut(s) 286
BsiHKAI GWGCWC 3 cut(s) 207, 227, 613
BsiSI CCGG 3 cut(s) 287, 356, 803
BsiWI CGTACG 1 cut(s) 273
BslI CCNNNNNNNGG 2 cut(s) 481, 577
BsmAI GTCTC 1 cut(s) 427
Bso31I GGTCTC 1 cut(s) 427
Bsp1286I GDGCHC 4 cut(s) 207, 227, 583, 613
Bsp19I CCATGG 1 cut(s) 141
BspCNI CTCAG 1 cut(s) 442
BspTNI GGTCTC 1 cut(s) 427
BsrFI RCCGGY 1 cut(s) 286
BsrI ACTGG 3 cut(s) 73, 221, 744
BssAI RCCGGY 1 cut(s) 286
BssECI CCNNGG 3 cut(s) 141, 455, 478
BssNAI GTATAC 1 cut(s) 506
BssSI CACGAG 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 141
Bst1107I GTATAC 1 cut(s) 506
Bst2BI CACGAG 1 cut(s) 105
Bst2UI CCWGG 3 cut(s) 91, 161, 479
Bst4CI ACNGT 3 cut(s) 122, 379, 438
Bst6I CTCTTC 1 cut(s) 558
BstC8I GCNNGC 4 cut(s) 155, 447, 487, 640
BstDEI CTNAG 3 cut(s) 37, 429, 685
BstDSI CCRYGG 1 cut(s) 141
BstMAI GTCTC 1 cut(s) 427
BstMWI GCNNNNNNNGC 2 cut(s) 495, 529
BstNI CCWGG 3 cut(s) 91, 161, 479
BstNSI RCATGY 1 cut(s) 523
BstSCI CCNGG 3 cut(s) 89, 159, 477
BstSFI CTRYAG 2 cut(s) 702, 708
BstSLI GKGCMC 1 cut(s) 613
BstV1I GCAGC 1 cut(s) 47
BstV2I GAAGAC 1 cut(s) 34
BstZ17I GTATAC 1 cut(s) 506
BtgI CCRYGG 1 cut(s) 141
BtrI CACGTC 1 cut(s) 679
Cac8I GCNNGC 4 cut(s) 155, 447, 487, 640
Cfr10I RCCGGY 1 cut(s) 286
Cfr13I GGNCC 1 cut(s) 557
CseI GACGC 1 cut(s) 320
CsiI ACCWGGT 1 cut(s) 89
Csp6I GTAC 4 cut(s) 274, 280, 424, 538
CspAI ACCGGT 1 cut(s) 286
CviAII CATG 5 cut(s) 142, 228, 520, 576, 827
CviQI GTAC 4 cut(s) 274, 280, 424, 538
DdeI CTNAG 3 cut(s) 37, 429, 685
DraIII CACNNNGTG 1 cut(s) 93
Eam1104I CTCTTC 1 cut(s) 558
EarI CTCTTC 1 cut(s) 558
Ecl136II GAGCTC 1 cut(s) 225
Eco130I CCWWGG 1 cut(s) 141
Eco24I GRGCYC 2 cut(s) 227, 583
Eco31I GGTCTC 1 cut(s) 427
Eco47I GGWCC 1 cut(s) 557
Eco53kI GAGCTC 1 cut(s) 225
Eco57I CTGAAG 3 cut(s) 554, 582, 647
EcoICRI GAGCTC 1 cut(s) 225
EcoRI GAATTC 1 cut(s) 785
EcoRII CCWGG 3 cut(s) 89, 159, 477
EcoT14I CCWWGG 1 cut(s) 141
EcoT38I GRGCYC 2 cut(s) 227, 583
ErhI CCWWGG 1 cut(s) 141
FaeI CATG 5 cut(s) 145, 231, 523, 579, 830
FatI CATG 5 cut(s) 141, 227, 519, 575, 826
FblI GTMKAC 2 cut(s) 136, 505
Fnu4HI GCNGC 1 cut(s) 61
FriOI GRGCYC 2 cut(s) 227, 583
Fsp4HI GCNGC 1 cut(s) 61
FspBI CTAG 2 cut(s) 296, 501
GluI GCNGC 1 cut(s) 61
GsaI CCCAGC 1 cut(s) 24
GsuI CTGGAG 2 cut(s) 434, 461
HapII CCGG 3 cut(s) 287, 356, 803
HgaI GACGC 1 cut(s) 320
Hin1II CATG 5 cut(s) 145, 231, 523, 579, 830
HincII GTYRAC 1 cut(s) 137
HindII GTYRAC 1 cut(s) 137
HindIII AAGCTT 2 cut(s) 174, 792
HinfI GANTC 4 cut(s) 146, 337, 389, 764
HpaII CCGG 3 cut(s) 287, 356, 803
HphI GGTGA 5 cut(s) 79, 301, 383, 769, 792
Hpy166II GTNNAC 7 cut(s) 125, 137, 292, 506, 611, 735, 779
Hpy188I TCNGA 4 cut(s) 336, 388, 432, 471
Hpy188III TCNNGA 3 cut(s) 320, 413, 560
Hpy8I GTNNAC 7 cut(s) 125, 137, 292, 506, 611, 735, 779
HpyAV CCTTC 1 cut(s) 622
HpyCH4III ACNGT 3 cut(s) 122, 379, 438
HpyCH4IV ACGT 1 cut(s) 678
HpyCH4V TGCA 5 cut(s) 63, 346, 589, 611, 826
HpyF10VI GCNNNNNNNGC 2 cut(s) 495, 529
HpyF3I CTNAG 3 cut(s) 37, 429, 685
HpySE526I ACGT 1 cut(s) 678
Hsp92II CATG 5 cut(s) 145, 231, 523, 579, 830
Lsp1109I GCAGC 1 cut(s) 47
LweI GCATC 1 cut(s) 808
MabI ACCWGGT 1 cut(s) 89
MaeI CTAG 2 cut(s) 296, 501
MaeII ACGT 1 cut(s) 678
MaeIII GTNAC 1 cut(s) 371
MboII GAAGA 5 cut(s) 20, 34, 180, 183, 575
MfeI CAATTG 1 cut(s) 584
MhlI GDGCHC 4 cut(s) 207, 227, 583, 613
MluCI AATT 3 cut(s) 5, 584, 785
MlyI GAGTC 1 cut(s) 383
MnlI CCTC 7 cut(s) 351, 409, 438, 465, 485, 522, 538
MroXI GAANNNNTTC 1 cut(s) 83
MseI TTAA 3 cut(s) 261, 315, 749
MspI CCGG 3 cut(s) 287, 356, 803
MspR9I CCNGG 3 cut(s) 91, 161, 479
MunI CAATTG 1 cut(s) 584
MvaI CCWGG 3 cut(s) 91, 161, 479
MwoI GCNNNNNNNGC 2 cut(s) 495, 529
NcoI CCATGG 1 cut(s) 141
NlaIII CATG 5 cut(s) 145, 231, 523, 579, 830
NmeAIII GCCGAG 1 cut(s) 436
NmuCI GTSAC 1 cut(s) 371
NspI RCATGY 1 cut(s) 523
PcsI WCGNNNNNNNCGW 1 cut(s) 133
PdmI GAANNNNTTC 1 cut(s) 83
PfeI GAWTC 3 cut(s) 146, 337, 764
Pfl23II CGTACG 1 cut(s) 273
PinAI ACCGGT 1 cut(s) 286
PkrI GCNGC 1 cut(s) 62
PleI GAGTC 1 cut(s) 383
PpsI GAGTC 1 cut(s) 383
Psp124BI GAGCTC 1 cut(s) 227
Psp6I CCWGG 3 cut(s) 89, 159, 477
PspFI CCCAGC 1 cut(s) 20
PspGI CCWGG 3 cut(s) 89, 159, 477
PspLI CGTACG 1 cut(s) 273
PspPI GGNCC 1 cut(s) 557
RsaI GTAC 4 cut(s) 275, 281, 425, 539
RsaNI GTAC 4 cut(s) 274, 280, 424, 538
SacI GAGCTC 1 cut(s) 227
SalI GTCGAC 1 cut(s) 135
SaqAI TTAA 3 cut(s) 261, 315, 749
SatI GCNGC 1 cut(s) 61
Sau96I GGNCC 1 cut(s) 557
SchI GAGTC 1 cut(s) 383
ScrFI CCNGG 3 cut(s) 91, 161, 479
SduI GDGCHC 4 cut(s) 207, 227, 583, 613
SexAI ACCWGGT 1 cut(s) 89
SfaNI GCATC 1 cut(s) 808
SfcI CTRYAG 2 cut(s) 702, 708
SinI GGWCC 1 cut(s) 557
SmlI CTYRAG 1 cut(s) 614
SmoI CTYRAG 1 cut(s) 614
Sse9I AATT 3 cut(s) 5, 584, 785
SspI AATATT 1 cut(s) 402
SspMI CTAG 2 cut(s) 296, 501
SstI GAGCTC 1 cut(s) 227
StyD4I CCNGG 3 cut(s) 89, 159, 477
StyI CCWWGG 1 cut(s) 141
TaaI ACNGT 3 cut(s) 122, 379, 438
TaiI ACGT 1 cut(s) 681
TaqI TCGA 2 cut(s) 117, 136
TasI AATT 3 cut(s) 5, 584, 785
TatI WGTACW 2 cut(s) 279, 537
TfiI GAWTC 3 cut(s) 146, 337, 764
Tru1I TTAA 3 cut(s) 261, 315, 749
Tru9I TTAA 3 cut(s) 261, 315, 749
TseFI GTSAC 1 cut(s) 371
TseI GCWGC 1 cut(s) 60
Tsp45I GTSAC 1 cut(s) 371
TspDTI ATGAA 6 cut(s) 17, 168, 174, 675, 777, 786
VneI GTGCAC 1 cut(s) 609
VpaK11BI GGWCC 1 cut(s) 557
XapI RAATTY 2 cut(s) 5, 785
XceI RCATGY 1 cut(s) 523
XmiI GTMKAC 2 cut(s) 136, 505
XmnI GAANNNNTTC 1 cut(s) 83
XspI CTAG 2 cut(s) 296, 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.