MD03G1008000.v1.1

Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
628064 .. 631828
3765 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1008000.v1.1.491

Sequence Viewer

Length: 1449 bp
ATGCCTCCGACCAAATTCTCACCGAAACTCCACCATGAAGCCACAGTGATCAGATCAGCAATCCAGTCCAGACTCCTAGTCCTGACTCTAATCCTCTTATGGCGGACTCTCTTGTCCTCCTACGACACCTCCGCCTCCATCAATCCCGATTGCCTATCTACCATCCCCTCACAAAAAAACGTTCTCTTTCATTCCCTGGGTTTGGCTATCGAGTCCAGCATTGTATGGGACAGTGTCTACTTTGTTCGGATTGCAGAGTGTGGCTACGAGTACGAGCAGACCTACGCTTTCTTCCCCCTTCTTCCTCTTTGCATGTCGTTCTTATCCCGCACAGTTTTGGCGCCATTGGTTCCAGTTATTGGGCAAAGAGCTGTGTTGGGATTATCCGGCTATGTCATTAATAACATTGGCTTCGTGTTTGCGGCAGTTTATTTATACAGGCTTTCAGTTGTCATTCTGAAGGACCAAGAAGCAGCAGTGAGGGCTTCAATTTTATTTTGCTTCAATCCAGCTTCCATATTCTATTCATCAATATATTCGGAGACAATGTTCGCCCTTTTTTCAGTTGGAGGATTGTACCATCTGATATCTGGAAAACATGTCATTGCTGTTCTTTGGTTTGCCATTTCAGGATTTTCAAGGTCCAATGGAGTGCTTAATGCTGGTTATTTCTGTTTTCAGACTATGCATCAGGCATATGATGCTGTTTTCTTGAGAAAGCGTCCTTTTTTGGCATTGCAGGCTGTTGTTGGTGGAGCTCTGCGCTGTATATGTATATTTGTTCCTTTTATTGCATTTCAAGCATATGGATACAACAATCTCTGTCTTGGACATCTTCCATCCGATATGAGGCCCTGGTGCAATGCAAGAGTCCCTTTGTTGTACAATTATATTCAGAGTCACTATTGGGGAGTAGGTTTCTTGAGATACTTCCAAGTTAAACAGTTGCCAAACTTTCTGCTGGCTTCACCAATATTGTCTCTAGCACTTTGCTCAATCGTCCATTACGCGAAGTCAAAGCCTGAAAAGTTCTTCTCTTTGGGTTTTCTTGCTCCTCCTGAGGATAAAGATTCTGCTGCTGTGCTCTTTTCTCTAGCAGAATACTCCTCCAGAAGTCAGGAAAATCGCACAAGGAAGCAAGTGAACAAAGATGGTCCTGCTTTACTCTCAGAAGAACATAAAGTATTAGCAAAGCAAGGATACTTGTCTGTTGCTGTGCTTCCATGTATTCTACATTTGGGATTTATGGCAGCCACCGCATTTTTTGTCATGCATGTGCAGGTTGCTACTCGTTTCTTATCCTTCAGCCCTCCCCTCTATTGGTTTGCGTCGTATATAATGAAATCTCATGGTACTGGTAAGAGATGGGGATATATAGTTTGGGCATACTCTGCTGCGTACATTCTTCTAGGCAGTTTGCTCTTTTCGAACTTCTATCCTTTCACTTGA

Protein Analysis

483

Amino Acids

54.11

Weight (kDa)

9.26

Isoelectric Point (pI)

51.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mannosyl_trans2 PF04188 16 - 482 2.3e-148 Mannosyltransferase (PIG-V)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 112
Acc36I ACCTGC 1 cut(s) 1270
AccB1I GGYRCC 1 cut(s) 340
AccB7I CCANNNNNTGG 1 cut(s) 359
AccI GTMKAC 1 cut(s) 237
AccII CGCG 1 cut(s) 1010
AciI CCGC 5 cut(s) 103, 132, 328, 422, 1257
AclI AACGTT 1 cut(s) 180
AcsI RAATTY 1 cut(s) 14
AcuI CTGAAG 2 cut(s) 479, 1288
AcyI GRCGYC 1 cut(s) 341
AfaI GTAC 5 cut(s) 272, 578, 884, 1354, 1400
AfiI CCNNNNNNNGG 4 cut(s) 202, 359, 849, 1320
AflIII ACRYGT 1 cut(s) 598
AgsI TTSAA 4 cut(s) 489, 505, 639, 800
AhdI GACNNNNNGTC 1 cut(s) 77
AjnI CCWGG 2 cut(s) 195, 854
AloI GAACNNNNNNTCC 2 cut(s) 533, 565
AluBI AGCT 3 cut(s) 371, 512, 758
AluI AGCT 3 cut(s) 371, 512, 758
Alw21I GWGCWC 2 cut(s) 760, 1086
Alw26I GTCTC 2 cut(s) 536, 984
AoxI GGCC 1 cut(s) 851
ApeKI GCWGC 4 cut(s) 473, 1076, 1250, 1394
ApoI RAATTY 1 cut(s) 14
AseI ATTAAT 1 cut(s) 399
AspLEI GCGC 2 cut(s) 343, 765
AspS9I GGNCC 4 cut(s) 463, 642, 852, 1154
AsuHPI GGTGA 2 cut(s) 12, 960
AsuII TTCGAA 1 cut(s) 1427
AvaII GGWCC 3 cut(s) 463, 642, 1154
AxyI CCTNAGG 1 cut(s) 1059
BanI GGYRCC 1 cut(s) 340
BanII GRGCYC 1 cut(s) 760
Bbv12I GWGCWC 2 cut(s) 760, 1086
BbvI GCAGC 4 cut(s) 485, 1063, 1262, 1381
BccI CCATC 6 cut(s) 146, 170, 588, 847, 1145, 1359
BciT130I CCWGG 2 cut(s) 197, 856
BciVI GTATCC 2 cut(s) 803, 1193
BclI TGATCA 1 cut(s) 48
BcoDI GTCTC 2 cut(s) 536, 984
BfaI CTAG 4 cut(s) 77, 983, 1094, 1409
BfoI RGCGCY 1 cut(s) 344
BfuAI ACCTGC 1 cut(s) 1270
BfuI GTATCC 2 cut(s) 803, 1193
BisI GCNGC 5 cut(s) 423, 474, 1077, 1251, 1395
BlsI GCNGC 5 cut(s) 424, 475, 1078, 1252, 1396
Bme1390I CCNGG 2 cut(s) 197, 856
Bme18I GGWCC 3 cut(s) 463, 642, 1154
BmeRI GACNNNNNGTC 1 cut(s) 77
BmgT120I GGNCC 4 cut(s) 463, 642, 852, 1154
BmiI GGNNCC 2 cut(s) 342, 351
BmrFI CCNGG 2 cut(s) 197, 856
BmsI GCATC 2 cut(s) 691, 697
BpmI CTGGAG 1 cut(s) 1093
Bpu14I TTCGAA 1 cut(s) 1427
BpuEI CTTGAG 2 cut(s) 733, 943
BsaHI GRCGYC 1 cut(s) 341
BsaJI CCNNGG 3 cut(s) 195, 196, 854
BsaXI ACNNNNNCTCC 6 cut(s) 12, 42, 113, 143, 533, 563
Bsc4I CCNNNNNNNGG 4 cut(s) 202, 359, 849, 1320
Bse1I ACTGG 3 cut(s) 64, 353, 1360
Bse21I CCTNAGG 1 cut(s) 1059
Bse3DI GCAATG 3 cut(s) 603, 734, 868
BseBI CCWGG 2 cut(s) 197, 856
BseDI CCNNGG 3 cut(s) 195, 196, 854
BseGI GGATG 2 cut(s) 162, 839
BseLI CCNNNNNNNGG 4 cut(s) 202, 359, 849, 1320
BseMI GCAATG 3 cut(s) 603, 734, 868
BseMII CTCAG 2 cut(s) 1050, 1182
BseNI ACTGG 3 cut(s) 64, 353, 1360
BseRI GAGGAG 2 cut(s) 1044, 1096
BseXI GCAGC 4 cut(s) 485, 1063, 1262, 1381
BsgI GTGCAG 1 cut(s) 1298
Bsh1236I CGCG 1 cut(s) 1010
BshFI GGCC 1 cut(s) 853
BshNI GGYRCC 1 cut(s) 340
BsiHKAI GWGCWC 2 cut(s) 760, 1086
BsiSI CCGG 1 cut(s) 387
BslFI GGGAC 2 cut(s) 242, 857
BslI CCNNNNNNNGG 4 cut(s) 202, 359, 849, 1320
BsmAI GTCTC 2 cut(s) 536, 984
BsmFI GGGAC 2 cut(s) 242, 857
BsnI GGCC 1 cut(s) 853
Bsp119I TTCGAA 1 cut(s) 1427
Bsp1286I GDGCHC 2 cut(s) 760, 1086
Bsp1407I TGTACA 1 cut(s) 882
Bsp143I GATC 2 cut(s) 48, 53
BspACI CCGC 5 cut(s) 103, 132, 328, 422, 1257
BspANI GGCC 1 cut(s) 853
BspCNI CTCAG 2 cut(s) 1051, 1181
BspFNI CGCG 1 cut(s) 1010
BspLI GGNNCC 2 cut(s) 342, 351
BspMI ACCTGC 1 cut(s) 1270
BspT104I TTCGAA 1 cut(s) 1427
BspT107I GGYRCC 1 cut(s) 340
BsrDI GCAATG 3 cut(s) 603, 734, 868
BsrGI TGTACA 1 cut(s) 882
BsrI ACTGG 3 cut(s) 64, 353, 1360
BssECI CCNNGG 3 cut(s) 195, 196, 854
BssMI GATC 2 cut(s) 48, 53
BssNI GRCGYC 1 cut(s) 341
Bst2UI CCWGG 2 cut(s) 197, 856
Bst4CI ACNGT 4 cut(s) 46, 233, 334, 945
BstACI GRCGYC 1 cut(s) 341
BstAPI GCANNNNNTGC 2 cut(s) 701, 1391
BstAUI TGTACA 1 cut(s) 882
BstBI TTCGAA 1 cut(s) 1427
BstC8I GCNNGC 2 cut(s) 741, 963
BstDEI CTNAG 2 cut(s) 1059, 1168
BstF5I GGATG 2 cut(s) 162, 839
BstFNI CGCG 1 cut(s) 1010
BstH2I RGCGCY 1 cut(s) 344
BstHHI GCGC 2 cut(s) 343, 765
BstKTI GATC 2 cut(s) 51, 56
BstMAI GTCTC 2 cut(s) 536, 984
BstMBI GATC 2 cut(s) 48, 53
BstMWI GCNNNNNNNGC 6 cut(s) 482, 701, 740, 800, 1256, 1391
BstNI CCWGG 2 cut(s) 197, 856
BstNSI RCATGY 3 cut(s) 316, 602, 1277
BstSCI CCNGG 2 cut(s) 195, 854
BstUI CGCG 1 cut(s) 1010
BstV1I GCAGC 4 cut(s) 485, 1063, 1262, 1381
Bsu36I CCTNAGG 1 cut(s) 1059
BsuI GTATCC 2 cut(s) 803, 1193
BsuRI GGCC 1 cut(s) 853
BtsCI GGATG 2 cut(s) 162, 839
BtsI GCAGTG 1 cut(s) 483
BtsIMutI CAGTG 3 cut(s) 51, 238, 483
BveI ACCTGC 1 cut(s) 1270
Cac8I GCNNGC 2 cut(s) 741, 963
CfoI GCGC 2 cut(s) 343, 765
Cfr13I GGNCC 4 cut(s) 463, 642, 852, 1154
CseI GACGC 2 cut(s) 710, 1317
Csp6I GTAC 5 cut(s) 271, 577, 883, 1353, 1399
CviAII CATG 7 cut(s) 35, 313, 599, 1224, 1270, 1274, 1349
CviQI GTAC 5 cut(s) 271, 577, 883, 1353, 1399
DdeI CTNAG 2 cut(s) 1059, 1168
DinI GGCGCC 1 cut(s) 342
DpnI GATC 2 cut(s) 50, 55
DpnII GATC 2 cut(s) 48, 53
DrdI GACNNNNNNGTC 1 cut(s) 112
DriI GACNNNNNGTC 1 cut(s) 77
DseDI GACNNNNNNGTC 1 cut(s) 112
Eam1105I GACNNNNNGTC 1 cut(s) 77
EciI GGCGGA 2 cut(s) 118, 121
Ecl136II GAGCTC 1 cut(s) 758
Eco24I GRGCYC 1 cut(s) 760
Eco32I GATATC 1 cut(s) 588
Eco47I GGWCC 3 cut(s) 463, 642, 1154
Eco53kI GAGCTC 1 cut(s) 758
Eco57I CTGAAG 2 cut(s) 479, 1288
Eco81I CCTNAGG 1 cut(s) 1059
EcoICRI GAGCTC 1 cut(s) 758
EcoO109I RGGNCCY 1 cut(s) 852
EcoRII CCWGG 2 cut(s) 195, 854
EcoRV GATATC 1 cut(s) 588
EcoT22I ATGCAT 2 cut(s) 690, 1275
EcoT38I GRGCYC 1 cut(s) 760
EgeI GGCGCC 1 cut(s) 342
EheI GGCGCC 1 cut(s) 342
FaeI CATG 7 cut(s) 38, 316, 602, 1227, 1273, 1277, 1352
FalI AAGNNNNNCTT 2 cut(s) 859, 891
FaqI GGGAC 2 cut(s) 242, 857
FatI CATG 7 cut(s) 34, 312, 598, 1223, 1269, 1273, 1348
FauI CCCGC 1 cut(s) 335
FauNDI CATATG 2 cut(s) 697, 805
FbaI TGATCA 1 cut(s) 48
FblI GTMKAC 1 cut(s) 237
Fnu4HI GCNGC 5 cut(s) 423, 474, 1077, 1251, 1395
FokI GGATG 2 cut(s) 149, 826
FriOI GRGCYC 1 cut(s) 760
Fsp4HI GCNGC 5 cut(s) 423, 474, 1077, 1251, 1395
FspBI CTAG 4 cut(s) 77, 983, 1094, 1409
GlaI GCGC 2 cut(s) 342, 764
GluI GCNGC 5 cut(s) 423, 474, 1077, 1251, 1395
GsuI CTGGAG 1 cut(s) 1093
HaeII RGCGCY 1 cut(s) 344
HaeIII GGCC 1 cut(s) 853
HapII CCGG 1 cut(s) 387
HgaI GACGC 2 cut(s) 710, 1317
HhaI GCGC 2 cut(s) 343, 765
Hin1I GRCGYC 1 cut(s) 341
Hin1II CATG 7 cut(s) 38, 316, 602, 1227, 1273, 1277, 1352
Hin6I GCGC 2 cut(s) 341, 763
HinP1I GCGC 2 cut(s) 341, 763
HinfI GANTC 7 cut(s) 72, 85, 106, 212, 870, 898, 1070
HpaII CCGG 1 cut(s) 387
HphI GGTGA 2 cut(s) 12, 960
Hpy166II GTNNAC 2 cut(s) 238, 1144
Hpy8I GTNNAC 2 cut(s) 238, 1144
Hpy99I CGWCG 1 cut(s) 1333
HpyAV CCTTC 3 cut(s) 308, 454, 1312
HpyCH4III ACNGT 4 cut(s) 46, 233, 334, 945
HpyCH4IV ACGT 1 cut(s) 180
HpyCH4V TGCA 9 cut(s) 254, 312, 688, 739, 794, 861, 866, 1273, 1279
HpyF10VI GCNNNNNNNGC 6 cut(s) 482, 701, 740, 800, 1256, 1391
HpyF3I CTNAG 2 cut(s) 1059, 1168
HpySE526I ACGT 1 cut(s) 180
Hsp92I GRCGYC 1 cut(s) 341
Hsp92II CATG 7 cut(s) 38, 316, 602, 1227, 1273, 1277, 1352
HspAI GCGC 2 cut(s) 341, 763
KasI GGCGCC 1 cut(s) 340
Ksp22I TGATCA 1 cut(s) 48
Kzo9I GATC 2 cut(s) 48, 53
LmnI GCTCC 2 cut(s) 755, 1057
Lsp1109I GCAGC 4 cut(s) 485, 1063, 1262, 1381
LweI GCATC 2 cut(s) 691, 697
MaeI CTAG 4 cut(s) 77, 983, 1094, 1409
MaeII ACGT 1 cut(s) 180
MaeIII GTNAC 1 cut(s) 899
MalI GATC 2 cut(s) 50, 55
MboI GATC 2 cut(s) 48, 53
MboII GAAGA 6 cut(s) 283, 293, 827, 1024, 1184, 1397
MhlI GDGCHC 2 cut(s) 760, 1086
MluCI AATT 3 cut(s) 14, 489, 886
Mly113I GGCGCC 1 cut(s) 341
MlyI GAGTC 6 cut(s) 66, 79, 100, 221, 879, 907
MmeI TCCRAC 2 cut(s) 32, 547
Mph1103I ATGCAT 2 cut(s) 690, 1275
MseI TTAA 3 cut(s) 399, 657, 939
MslI CAYNNNNRTG 1 cut(s) 1274
MspI CCGG 1 cut(s) 387
MspR9I CCNGG 2 cut(s) 197, 856
MvaI CCWGG 2 cut(s) 197, 856
MvnI CGCG 1 cut(s) 1010
MwoI GCNNNNNNNGC 6 cut(s) 482, 701, 740, 800, 1256, 1391
NarI GGCGCC 1 cut(s) 341
NdeI CATATG 2 cut(s) 697, 805
NdeII GATC 2 cut(s) 48, 53
NlaIII CATG 7 cut(s) 38, 316, 602, 1227, 1273, 1277, 1352
NlaIV GGNNCC 2 cut(s) 342, 351
NmuCI GTSAC 1 cut(s) 899
NsiI ATGCAT 2 cut(s) 690, 1275
NspI RCATGY 3 cut(s) 316, 602, 1277
NspV TTCGAA 1 cut(s) 1427
PasI CCCWGGG 1 cut(s) 196
PciI ACATGT 1 cut(s) 598
PfeI GAWTC 1 cut(s) 1070
PflFI GACNNNGTC 1 cut(s) 233
PflMI CCANNNNNTGG 1 cut(s) 359
PkrI GCNGC 5 cut(s) 424, 475, 1078, 1252, 1396
PleI GAGTC 6 cut(s) 66, 79, 100, 220, 878, 906
PluTI GGCGCC 1 cut(s) 344
PpsI GAGTC 6 cut(s) 66, 79, 100, 220, 878, 906
PscI ACATGT 1 cut(s) 598
PshBI ATTAAT 1 cut(s) 399
Psp124BI GAGCTC 1 cut(s) 760
Psp1406I AACGTT 1 cut(s) 180
Psp6I CCWGG 2 cut(s) 195, 854
PspGI CCWGG 2 cut(s) 195, 854
PspN4I GGNNCC 2 cut(s) 342, 351
PspPI GGNCC 4 cut(s) 463, 642, 852, 1154
PsyI GACNNNGTC 1 cut(s) 233
RsaI GTAC 5 cut(s) 272, 578, 884, 1354, 1400
RsaNI GTAC 5 cut(s) 271, 577, 883, 1353, 1399
RseI CAYNNNNRTG 1 cut(s) 1274
SacI GAGCTC 1 cut(s) 760
SaqAI TTAA 3 cut(s) 399, 657, 939
SatI GCNGC 5 cut(s) 423, 474, 1077, 1251, 1395
Sau3AI GATC 2 cut(s) 48, 53
Sau96I GGNCC 4 cut(s) 463, 642, 852, 1154
SchI GAGTC 6 cut(s) 66, 79, 100, 221, 879, 907
ScrFI CCNGG 2 cut(s) 197, 856
SduI GDGCHC 2 cut(s) 760, 1086
SetI ASST 9 cut(s) 131, 183, 284, 373, 514, 644, 760, 919, 1284
SfaNI GCATC 2 cut(s) 691, 697
SfoI GGCGCC 1 cut(s) 342
SfuI TTCGAA 1 cut(s) 1427
SinI GGWCC 3 cut(s) 463, 642, 1154
SmiMI CAYNNNNRTG 1 cut(s) 1274
SmlI CTYRAG 2 cut(s) 712, 922
SmoI CTYRAG 2 cut(s) 712, 922
Sse9I AATT 3 cut(s) 14, 489, 886
SsiI CCGC 5 cut(s) 103, 132, 328, 422, 1257
SspDI GGCGCC 1 cut(s) 340
SspI AATATT 1 cut(s) 975
SspMI CTAG 4 cut(s) 77, 983, 1094, 1409
SstI GAGCTC 1 cut(s) 760
StyD4I CCNGG 2 cut(s) 195, 854
TaaI ACNGT 4 cut(s) 46, 233, 334, 945
TaiI ACGT 1 cut(s) 183
TaqI TCGA 2 cut(s) 210, 1427
TasI AATT 3 cut(s) 14, 489, 886
TatI WGTACW 1 cut(s) 882
TauI GCSGC 1 cut(s) 425
TfiI GAWTC 1 cut(s) 1070
Tru1I TTAA 3 cut(s) 399, 657, 939
Tru9I TTAA 3 cut(s) 399, 657, 939
TscAI CASTG 3 cut(s) 51, 238, 483
TseFI GTSAC 1 cut(s) 899
TseI GCWGC 4 cut(s) 473, 1076, 1250, 1394
Tsp45I GTSAC 1 cut(s) 899
TspDTI ATGAA 4 cut(s) 51, 179, 516, 1355
TspRI CASTG 3 cut(s) 51, 238, 483
Tth111I GACNNNGTC 1 cut(s) 233
Van91I CCANNNNNTGG 1 cut(s) 359
VpaK11BI GGWCC 3 cut(s) 463, 642, 1154
VspI ATTAAT 1 cut(s) 399
XapI RAATTY 1 cut(s) 14
XceI RCATGY 3 cut(s) 316, 602, 1277
XcmI CCANNNNNNNNNTGG 1 cut(s) 587
XmiI GTMKAC 1 cut(s) 237
XspI CTAG 4 cut(s) 77, 983, 1094, 1409
Zsp2I ATGCAT 2 cut(s) 690, 1275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.