Rmu_sc0002706.1_g000001

Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002706.1
Physical Location & Seq
Reverse (-)
1 .. 3469
3469 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002706.1_g000001.1.cds

Sequence Viewer

Length: 1333 bp
atgtctccgaccaaatcccaccacgaatccacagttatcaaatccgcaatccgatccagactcctagtcctctctctcatcatcctatggcgcaccctcctcagcccctacgatacctccgcacccatcaaccccacttgcctatctcaacatcctgacgttgttgatcaaccccagaaacatgtcctgttccctcggctcggctcggccatcgaggccagcattgtatgggacagtgtctactacgttcgaatcgcacaatgtggatacgagtacgaacagttctacgctttcttcccactcctcccactctgcatttcattgttgtcccgcaaagttttggcgccattgattccggttattgggcatagagctgtgttgggtttatcaggctatgtgatcaataacgttggctttgtgtttgcggctctttatttgtacaggctctcagttattattttgaaggaccatgaagcagcattgagggcttcaattttgttttgcttcaatccagcttccatattctattcatcaatatattcggagactctgtacgccctattttcacttgggggattgtaccatctaatgtccggaaagaatgctattgctgttctttggcttgccctctctggattttcaaggtccaatggaatgcttaatgctggttatttctgttttcagactatgcatcaggcttacgatgctgttttcttgagaaagcgtgcttttgttcttgttggtggagctctccgttgtatatgtatttttgttccttttgttgcatttcaagcatacggataccacaatatctgtctcgggcattttccaaatgaaatgagcccctggtgcaaagcaagagtgcctatgctgtataattatattcaaaatcattactggggagtaggttttctgaaatacttcctagttaaacagttgccaaactttctactggcatcgccgatattgtctttggcactttgctcaattgtccattacgcgaagtcaaatcccgaaaacttcttctctttaggtttccatgctcgtactgaggagaaaaattctgctgctgtgctgtttaccttgagtcatgaaattcgcaatctcaaagcaaaaaagcaagtgatcaagcaaactcctactctacccccagaagaatctaaactaccagcaaatcaaggatactcgtctgttgctgctctcccatatatttttcatttgggatttatggcagccaccgctttttttgtcatgcatgtgcaggttgctactcgcttcctatctttcagccctcctctctattggtttgcttcgtatatattgaaatcgcctc

Protein Analysis

444

Amino Acids

50.0

Weight (kDa)

9.35

Isoelectric Point (pI)

49.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1252
AccB1I GGYRCC 1 cut(s) 343
AccI GTMKAC 1 cut(s) 240
AccII CGCG 1 cut(s) 1001
AccIII TCCGGA 1 cut(s) 593
AciI CCGC 5 cut(s) 45, 120, 331, 425, 1239
AclI AACGTT 1 cut(s) 408
AclWI GGATC 1 cut(s) 48
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 2 cut(s) 1060, 1095
AcyI GRCGYC 1 cut(s) 344
AdeI CACNNNGTG 1 cut(s) 263
AfaI GTAC 5 cut(s) 275, 440, 554, 581, 1048
AfiI CCNNNNNNNGG 2 cut(s) 200, 362
AflIII ACRYGT 1 cut(s) 181
AgsI TTSAA 7 cut(s) 463, 492, 508, 642, 791, 887, 1324
AhdI GACNNNNNGTC 1 cut(s) 65
AjnI CCWGG 1 cut(s) 845
AluBI AGCT 3 cut(s) 374, 515, 749
AluI AGCT 3 cut(s) 374, 515, 749
Alw21I GWGCWC 1 cut(s) 751
Alw26I GTCTC 3 cut(s) 9, 539, 821
AlwI GGATC 1 cut(s) 48
Ama87I CYCGRG 1 cut(s) 818
Aor13HI TCCGGA 1 cut(s) 593
AoxI GGCC 2 cut(s) 207, 216
ApeKI GCWGC 4 cut(s) 476, 1067, 1196, 1232
ApoI RAATTY 2 cut(s) 1060, 1095
Asp700I GAANNNNTTC 1 cut(s) 920
AspLEI GCGC 2 cut(s) 93, 346
AspS9I GGNCC 2 cut(s) 466, 645
AsuII TTCGAA 1 cut(s) 250
AvaI CYCGRG 1 cut(s) 818
AvaII GGWCC 2 cut(s) 466, 645
BanI GGYRCC 1 cut(s) 343
BanII GRGCYC 2 cut(s) 751, 845
Bbv12I GWGCWC 1 cut(s) 751
BbvCI CCTCAGC 1 cut(s) 101
BbvI GCAGC 4 cut(s) 488, 1054, 1183, 1244
BccI CCATC 3 cut(s) 134, 218, 591
BciT130I CCWGG 1 cut(s) 847
BciVI GTATCC 3 cut(s) 260, 794, 1175
BclI TGATCA 3 cut(s) 166, 399, 1125
BcoDI GTCTC 3 cut(s) 9, 539, 821
BfaI CTAG 2 cut(s) 65, 926
BfoI RGCGCY 1 cut(s) 347
BfuAI ACCTGC 1 cut(s) 1252
BfuI GTATCC 3 cut(s) 260, 794, 1175
BglI GCCNNNNNGGC 1 cut(s) 215
BisI GCNGC 5 cut(s) 426, 477, 1068, 1197, 1233
BlsI GCNGC 5 cut(s) 427, 478, 1069, 1198, 1234
Bme1390I CCNGG 1 cut(s) 847
Bme18I GGWCC 2 cut(s) 466, 645
BmeRI GACNNNNNGTC 1 cut(s) 65
BmeT110I CYCGRG 1 cut(s) 818
BmgT120I GGNCC 2 cut(s) 466, 645
BmiI GGNNCC 1 cut(s) 345
BmrFI CCNGG 1 cut(s) 847
BmrI ACTGGG 1 cut(s) 907
BmsI GCATC 3 cut(s) 694, 700, 965
BmuI ACTGGG 1 cut(s) 907
Bpu10I CCTNAGC 1 cut(s) 101
Bpu14I TTCGAA 1 cut(s) 250
BpuEI CTTGAG 2 cut(s) 736, 1105
BsaHI GRCGYC 1 cut(s) 344
BsaJI CCNNGG 2 cut(s) 194, 845
BsaWI WCCGGW 2 cut(s) 355, 593
BsaXI ACNNNNNCTCC 4 cut(s) 101, 131, 536, 566
Bsc4I CCNNNNNNNGG 2 cut(s) 200, 362
Bse1I ACTGG 2 cut(s) 902, 957
BseAI TCCGGA 1 cut(s) 593
BseBI CCWGG 1 cut(s) 847
BseDI CCNNGG 2 cut(s) 194, 845
BseGI GGATG 2 cut(s) 81, 151
BseLI CCNNNNNNNGG 2 cut(s) 200, 362
BseMII CTCAG 3 cut(s) 115, 462, 1041
BseNI ACTGG 2 cut(s) 902, 957
BseRI GAGGAG 4 cut(s) 89, 293, 1067, 1284
BseXI GCAGC 4 cut(s) 488, 1054, 1183, 1244
BsgI GTGCAG 1 cut(s) 1280
Bsh1236I CGCG 1 cut(s) 1001
BshFI GGCC 2 cut(s) 209, 218
BshNI GGYRCC 1 cut(s) 343
BsiHKAI GWGCWC 1 cut(s) 751
BsiHKCI CYCGRG 1 cut(s) 818
BsiSI CCGG 2 cut(s) 356, 594
BslFI GGGAC 2 cut(s) 245, 313
BslI CCNNNNNNNGG 2 cut(s) 200, 362
BsmAI GTCTC 3 cut(s) 9, 539, 821
BsmFI GGGAC 2 cut(s) 245, 313
BsmI GAATGC 2 cut(s) 607, 660
BsnI GGCC 2 cut(s) 209, 218
BsoBI CYCGRG 1 cut(s) 818
Bsp119I TTCGAA 1 cut(s) 250
Bsp1286I GDGCHC 2 cut(s) 751, 845
Bsp13I TCCGGA 1 cut(s) 593
Bsp1407I TGTACA 1 cut(s) 438
Bsp143I GATC 4 cut(s) 53, 166, 399, 1125
BspACI CCGC 5 cut(s) 45, 120, 331, 425, 1239
BspANI GGCC 2 cut(s) 209, 218
BspCNI CTCAG 3 cut(s) 114, 461, 1042
BspEI TCCGGA 1 cut(s) 593
BspFNI CGCG 1 cut(s) 1001
BspHI TCATGA 1 cut(s) 1090
BspLI GGNNCC 1 cut(s) 345
BspMI ACCTGC 1 cut(s) 1252
BspPI GGATC 1 cut(s) 48
BspT104I TTCGAA 1 cut(s) 250
BspT107I GGYRCC 1 cut(s) 343
BsrGI TGTACA 1 cut(s) 438
BsrI ACTGG 2 cut(s) 902, 957
BssECI CCNNGG 2 cut(s) 194, 845
BssMI GATC 4 cut(s) 53, 166, 399, 1125
BssNI GRCGYC 1 cut(s) 344
Bst2UI CCWGG 1 cut(s) 847
Bst4CI ACNGT 4 cut(s) 34, 236, 282, 936
BstACI GRCGYC 1 cut(s) 344
BstAUI TGTACA 1 cut(s) 438
BstBI TTCGAA 1 cut(s) 250
BstC8I GCNNGC 3 cut(s) 220, 624, 726
BstDEI CTNAG 3 cut(s) 101, 448, 1050
BstF5I GGATG 2 cut(s) 81, 151
BstFNI CGCG 1 cut(s) 1001
BstH2I RGCGCY 1 cut(s) 347
BstHHI GCGC 2 cut(s) 93, 346
BstKTI GATC 4 cut(s) 56, 169, 402, 1128
BstMAI GTCTC 3 cut(s) 9, 539, 821
BstMBI GATC 4 cut(s) 53, 166, 399, 1125
BstMWI GCNNNNNNNGC 6 cut(s) 215, 485, 704, 791, 849, 1238
BstNI CCWGG 1 cut(s) 847
BstNSI RCATGY 2 cut(s) 185, 1259
BstSCI CCNGG 1 cut(s) 845
BstUI CGCG 1 cut(s) 1001
BstV1I GCAGC 4 cut(s) 488, 1054, 1183, 1244
BsuI GTATCC 3 cut(s) 260, 794, 1175
BsuRI GGCC 2 cut(s) 209, 218
BtgZI GCGATG 1 cut(s) 942
BtsCI GGATG 2 cut(s) 81, 151
BtsIMutI CAGTG 1 cut(s) 241
BveI ACCTGC 1 cut(s) 1252
Cac8I GCNNGC 3 cut(s) 220, 624, 726
CciI TCATGA 1 cut(s) 1090
CfoI GCGC 2 cut(s) 93, 346
Cfr13I GGNCC 2 cut(s) 466, 645
Csp6I GTAC 5 cut(s) 274, 439, 553, 580, 1047
CviAII CATG 6 cut(s) 182, 470, 1040, 1091, 1252, 1256
CviQI GTAC 5 cut(s) 274, 439, 553, 580, 1047
DdeI CTNAG 3 cut(s) 101, 448, 1050
DinI GGCGCC 1 cut(s) 345
DpnI GATC 4 cut(s) 55, 168, 401, 1127
DpnII GATC 4 cut(s) 53, 166, 399, 1125
DraIII CACNNNGTG 1 cut(s) 263
DriI GACNNNNNGTC 1 cut(s) 65
EaeI YGGCCR 1 cut(s) 207
Eam1105I GACNNNNNGTC 1 cut(s) 65
Ecl136II GAGCTC 1 cut(s) 749
Eco24I GRGCYC 2 cut(s) 751, 845
Eco47I GGWCC 2 cut(s) 466, 645
Eco53kI GAGCTC 1 cut(s) 749
Eco88I CYCGRG 1 cut(s) 818
EcoICRI GAGCTC 1 cut(s) 749
EcoRII CCWGG 1 cut(s) 845
EcoT22I ATGCAT 2 cut(s) 693, 1257
EcoT38I GRGCYC 2 cut(s) 751, 845
EgeI GGCGCC 1 cut(s) 345
EheI GGCGCC 1 cut(s) 345
FaeI CATG 6 cut(s) 185, 473, 1043, 1094, 1255, 1259
FaqI GGGAC 2 cut(s) 245, 313
FatI CATG 6 cut(s) 181, 469, 1039, 1090, 1251, 1255
FauI CCCGC 1 cut(s) 338
FbaI TGATCA 3 cut(s) 166, 399, 1125
FblI GTMKAC 1 cut(s) 240
Fnu4HI GCNGC 5 cut(s) 426, 477, 1068, 1197, 1233
FokI GGATG 2 cut(s) 68, 138
FriOI GRGCYC 2 cut(s) 751, 845
Fsp4HI GCNGC 5 cut(s) 426, 477, 1068, 1197, 1233
FspBI CTAG 2 cut(s) 65, 926
GlaI GCGC 2 cut(s) 92, 345
GluI GCNGC 5 cut(s) 426, 477, 1068, 1197, 1233
HaeII RGCGCY 1 cut(s) 347
HaeIII GGCC 2 cut(s) 209, 218
HapII CCGG 2 cut(s) 356, 594
HhaI GCGC 2 cut(s) 93, 346
Hin1I GRCGYC 1 cut(s) 344
Hin1II CATG 6 cut(s) 185, 473, 1043, 1094, 1255, 1259
Hin6I GCGC 2 cut(s) 91, 344
HinP1I GCGC 2 cut(s) 91, 344
HinfI GANTC 7 cut(s) 26, 60, 252, 352, 547, 1087, 1157
HpaII CCGG 2 cut(s) 356, 594
Hpy166II GTNNAC 2 cut(s) 241, 1080
Hpy188I TCNGA 5 cut(s) 9, 53, 544, 684, 915
Hpy188III TCNNGA 7 cut(s) 57, 155, 594, 633, 715, 1013, 1091
Hpy8I GTNNAC 2 cut(s) 241, 1080
HpyAV CCTTC 1 cut(s) 457
HpyCH4III ACNGT 4 cut(s) 34, 236, 282, 936
HpyCH4IV ACGT 3 cut(s) 159, 246, 408
HpyCH4V TGCA 6 cut(s) 315, 691, 785, 852, 1255, 1261
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 485, 704, 791, 849, 1238
HpyF3I CTNAG 3 cut(s) 101, 448, 1050
HpySE526I ACGT 3 cut(s) 159, 246, 408
Hsp92I GRCGYC 1 cut(s) 344
Hsp92II CATG 6 cut(s) 185, 473, 1043, 1094, 1255, 1259
HspAI GCGC 2 cut(s) 91, 344
KasI GGCGCC 1 cut(s) 343
Kpn2I TCCGGA 1 cut(s) 593
Ksp22I TGATCA 3 cut(s) 166, 399, 1125
Kzo9I GATC 4 cut(s) 53, 166, 399, 1125
LmnI GCTCC 1 cut(s) 746
Lsp1109I GCAGC 4 cut(s) 488, 1054, 1183, 1244
LweI GCATC 3 cut(s) 694, 700, 965
MaeI CTAG 2 cut(s) 65, 926
MaeII ACGT 3 cut(s) 159, 246, 408
MalI GATC 4 cut(s) 55, 168, 401, 1127
MboI GATC 4 cut(s) 53, 166, 399, 1125
MboII GAAGA 3 cut(s) 286, 1015, 1166
MfeI CAATTG 1 cut(s) 987
MhlI GDGCHC 2 cut(s) 751, 845
MluCI AATT 5 cut(s) 492, 877, 987, 1060, 1095
Mly113I GGCGCC 1 cut(s) 344
MlyI GAGTC 3 cut(s) 54, 541, 1096
MmeI TCCRAC 1 cut(s) 32
Mph1103I ATGCAT 2 cut(s) 693, 1257
MroI TCCGGA 1 cut(s) 593
MroXI GAANNNNTTC 1 cut(s) 920
MseI TTAA 2 cut(s) 660, 930
MslI CAYNNNNRTG 1 cut(s) 1256
MspI CCGG 2 cut(s) 356, 594
MspR9I CCNGG 1 cut(s) 847
MunI CAATTG 1 cut(s) 987
Mva1269I GAATGC 2 cut(s) 607, 660
MvaI CCWGG 1 cut(s) 847
MvnI CGCG 1 cut(s) 1001
MwoI GCNNNNNNNGC 6 cut(s) 215, 485, 704, 791, 849, 1238
NarI GGCGCC 1 cut(s) 344
NdeII GATC 4 cut(s) 53, 166, 399, 1125
NlaIII CATG 6 cut(s) 185, 473, 1043, 1094, 1255, 1259
NlaIV GGNNCC 1 cut(s) 345
NmeAIII GCCGAG 3 cut(s) 175, 180, 185
NsiI ATGCAT 2 cut(s) 693, 1257
NspI RCATGY 2 cut(s) 185, 1259
NspV TTCGAA 1 cut(s) 250
PagI TCATGA 1 cut(s) 1090
PciI ACATGT 1 cut(s) 181
PctI GAATGC 2 cut(s) 607, 660
PdmI GAANNNNTTC 1 cut(s) 920
PfeI GAWTC 4 cut(s) 26, 252, 352, 1157
PflFI GACNNNGTC 1 cut(s) 236
PkrI GCNGC 5 cut(s) 427, 478, 1069, 1198, 1234
PleI GAGTC 3 cut(s) 54, 541, 1095
PluTI GGCGCC 1 cut(s) 347
PpsI GAGTC 3 cut(s) 54, 541, 1095
PscI ACATGT 1 cut(s) 181
Psp124BI GAGCTC 1 cut(s) 751
Psp1406I AACGTT 1 cut(s) 408
Psp6I CCWGG 1 cut(s) 845
PspGI CCWGG 1 cut(s) 845
PspN4I GGNNCC 1 cut(s) 345
PspPI GGNCC 2 cut(s) 466, 645
PsrI GAACNNNNNNTAC 2 cut(s) 266, 298
PsyI GACNNNGTC 1 cut(s) 236
RsaI GTAC 5 cut(s) 275, 440, 554, 581, 1048
RsaNI GTAC 5 cut(s) 274, 439, 553, 580, 1047
RseI CAYNNNNRTG 1 cut(s) 1256
SacI GAGCTC 1 cut(s) 751
SaqAI TTAA 2 cut(s) 660, 930
SatI GCNGC 5 cut(s) 426, 477, 1068, 1197, 1233
Sau3AI GATC 4 cut(s) 53, 166, 399, 1125
Sau96I GGNCC 2 cut(s) 466, 645
SchI GAGTC 3 cut(s) 54, 541, 1096
ScrFI CCNGG 1 cut(s) 847
SduI GDGCHC 2 cut(s) 751, 845
SfaNI GCATC 3 cut(s) 694, 700, 965
SfiI GGCCNNNNNGGCC 1 cut(s) 215
SfoI GGCGCC 1 cut(s) 345
SfuI TTCGAA 1 cut(s) 250
SinI GGWCC 2 cut(s) 466, 645
SmiMI CAYNNNNRTG 1 cut(s) 1256
SmlI CTYRAG 2 cut(s) 715, 1084
SmoI CTYRAG 2 cut(s) 715, 1084
Sse9I AATT 5 cut(s) 492, 877, 987, 1060, 1095
SsiI CCGC 5 cut(s) 45, 120, 331, 425, 1239
SspDI GGCGCC 1 cut(s) 343
SspMI CTAG 2 cut(s) 65, 926
SstI GAGCTC 1 cut(s) 751
StyD4I CCNGG 1 cut(s) 845
TaaI ACNGT 4 cut(s) 34, 236, 282, 936
TaiI ACGT 3 cut(s) 162, 249, 411
TaqI TCGA 2 cut(s) 213, 250
TasI AATT 5 cut(s) 492, 877, 987, 1060, 1095
TatI WGTACW 1 cut(s) 438
TauI GCSGC 1 cut(s) 428
TfiI GAWTC 4 cut(s) 26, 252, 352, 1157
Tru1I TTAA 2 cut(s) 660, 930
Tru9I TTAA 2 cut(s) 660, 930
TscAI CASTG 1 cut(s) 241
TseI GCWGC 4 cut(s) 476, 1067, 1196, 1232
TspDTI ATGAA 6 cut(s) 309, 486, 519, 849, 1107, 1205
TspGWI ACGGA 2 cut(s) 743, 813
TspRI CASTG 1 cut(s) 241
Tth111I GACNNNGTC 1 cut(s) 236
VpaK11BI GGWCC 2 cut(s) 466, 645
XapI RAATTY 2 cut(s) 1060, 1095
XceI RCATGY 2 cut(s) 185, 1259
XmiI GTMKAC 1 cut(s) 240
XmnI GAANNNNTTC 1 cut(s) 920
XspI CTAG 2 cut(s) 65, 926
Zsp2I ATGCAT 2 cut(s) 693, 1257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.