Rh5AG528600

Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
90616535 .. 90620335
3801 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG528600.1

Sequence Viewer

Length: 1281 bp
ATGTCTCCGACCAAATCCCACCACGAATCCACAGTTATCAAATACGCAATCCGATCCAGACTCCTAGTCCTCTCTCTCATCATCCTATGGCGCACCCTCCTCAGCCCCTACGATACCTCCGCACCCATCAACCCCACTTGCCTATCTCAACATCCTGACGTTGTTGATCAACCCCAGAAACATGTCCTGTTCCCTCGCCTCGGCTCGGCCATCGAGGCCAGCATTGTATGGGACAGTGTCTACTACGTTCGAATCGCACAATGTGGATACGAGTACGAACAGTTCTACGCTTTCTTCCCACTCCTCCCACTCTGCATTTCATTGTTGTCTCGCAAAGTTTTGGCGCCATTGATTCCGGTTATTGGGCATAGAGCTGTGTTGGGTTTATCAGGCTATGTGATCAATAACGTTGGCTTTGTGTTTGCGGCTCTCTATTTGTACAGGCTCTCAGTTATTATTTTGAAGGACCATGAAGCAGCATTGAGGGCTTCAATTTTGTTTTGCTTCAATCCAGCTTCCATATTCTATTCATCAATATATTCGGAGACTCTTTACGCCCTATTTTCACTTGGGGGATTGTACCATCTAATGTCCGGAAAGAATGCTATTGCTGTTCTTTGGCTTGCCCTCTCTGGATTTTCAAGGTCCAATGGAATGCTTAATGCTGGTTATTTCTGTTTTCAGACTATGCATCAGGCTTACGATGCTGTTTTCTTGAGAAAGCGTGCTTTTTTGGCAATGCAGGTTCTTGTTGGTGGAGCTCTCCGTTGTATATGTATTTTTGTTCCTTTTGTTGCATTTCAAGCATACGGATACCACAATATCTGTCTCGGGCATTTTCCAAATGAAATGAGCCCCTGGTGCAAAGCAAGAGTGCCTATGCTGTATAATTATATTCAAAATCATTACTGGGGAGTAGGTTTTCTGAAATACTTCCAAGTTAAACAGTTGCCAAACTTTCTACTGGCATCGCCGATATTGTCTTTGGCACTTTGCTCAATTGTCCATTACGCGAAGTCAAATCCCGAAAACTTCTTCTCTTTAGGTTTCCATGCTCCTACTGAGGAGAAAAATTCTGCTGCTGTGCTGTTTACCTTGAGTCATGAAAATCGCAATCTCAAAGCAAAAAAGCAAGTGATCAAGCAAACTCCTACTCTACCCCCAGAAGAATCTAAATTACCAGCAAGTCAAGGATACTCGTCTGTTGCTGCTCTCCCATATATTTTTCATTTGGGATTTATGGCAGCCACCGCTTTTTTTGTCATGCATGTGCAGGTTTGA

Protein Analysis

426

Amino Acids

47.87

Weight (kDa)

9.21

Isoelectric Point (pI)

49.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mannosyl_trans2 PF04188 12 - 426 9e-133 Mannosyltransferase (PIG-V)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 733, 1264
AccB1I GGYRCC 1 cut(s) 343
AccI GTMKAC 1 cut(s) 240
AccII CGCG 1 cut(s) 1013
AccIII TCCGGA 1 cut(s) 593
AciI CCGC 3 cut(s) 120, 425, 1251
AclI AACGTT 1 cut(s) 408
AclWI GGATC 1 cut(s) 48
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 1 cut(s) 1072
AcyI GRCGYC 1 cut(s) 344
AdeI CACNNNGTG 1 cut(s) 263
AfaI GTAC 3 cut(s) 275, 440, 581
AfiI CCNNNNNNNGG 3 cut(s) 200, 205, 362
AflIII ACRYGT 1 cut(s) 181
AgsI TTSAA 6 cut(s) 463, 492, 508, 642, 803, 899
AhdI GACNNNNNGTC 1 cut(s) 65
AjnI CCWGG 1 cut(s) 857
AluBI AGCT 3 cut(s) 374, 515, 761
AluI AGCT 3 cut(s) 374, 515, 761
Alw21I GWGCWC 1 cut(s) 763
Alw26I GTCTC 4 cut(s) 9, 333, 539, 833
AlwI GGATC 1 cut(s) 48
Ama87I CYCGRG 1 cut(s) 830
Aor13HI TCCGGA 1 cut(s) 593
AoxI GGCC 2 cut(s) 207, 216
ApeKI GCWGC 4 cut(s) 476, 1079, 1208, 1244
ApoI RAATTY 1 cut(s) 1072
Asp700I GAANNNNTTC 1 cut(s) 932
AspLEI GCGC 2 cut(s) 93, 346
AspS9I GGNCC 2 cut(s) 466, 645
AsuII TTCGAA 1 cut(s) 250
AvaI CYCGRG 1 cut(s) 830
AvaII GGWCC 2 cut(s) 466, 645
BanI GGYRCC 1 cut(s) 343
BanII GRGCYC 2 cut(s) 763, 857
Bbv12I GWGCWC 1 cut(s) 763
BbvCI CCTCAGC 1 cut(s) 101
BbvI GCAGC 4 cut(s) 488, 1066, 1195, 1256
BccI CCATC 3 cut(s) 134, 218, 591
BciT130I CCWGG 1 cut(s) 859
BciVI GTATCC 3 cut(s) 260, 806, 1187
BclI TGATCA 3 cut(s) 166, 399, 1137
BcoDI GTCTC 4 cut(s) 9, 333, 539, 833
BfaI CTAG 1 cut(s) 65
BfoI RGCGCY 1 cut(s) 347
BfuAI ACCTGC 2 cut(s) 733, 1264
BfuI GTATCC 3 cut(s) 260, 806, 1187
BglI GCCNNNNNGGC 1 cut(s) 215
BisI GCNGC 5 cut(s) 426, 477, 1080, 1209, 1245
BlsI GCNGC 5 cut(s) 427, 478, 1081, 1210, 1246
Bme1390I CCNGG 1 cut(s) 859
Bme18I GGWCC 2 cut(s) 466, 645
BmeRI GACNNNNNGTC 1 cut(s) 65
BmeT110I CYCGRG 1 cut(s) 830
BmgT120I GGNCC 2 cut(s) 466, 645
BmiI GGNNCC 1 cut(s) 345
BmrFI CCNGG 1 cut(s) 859
BmrI ACTGGG 1 cut(s) 919
BmsI GCATC 3 cut(s) 694, 700, 977
BmuI ACTGGG 1 cut(s) 919
Bpu10I CCTNAGC 1 cut(s) 101
Bpu14I TTCGAA 1 cut(s) 250
BpuEI CTTGAG 2 cut(s) 736, 1117
BsaHI GRCGYC 1 cut(s) 344
BsaJI CCNNGG 2 cut(s) 199, 857
BsaWI WCCGGW 2 cut(s) 355, 593
BsaXI ACNNNNNCTCC 2 cut(s) 101, 131
Bsc4I CCNNNNNNNGG 3 cut(s) 200, 205, 362
Bse1I ACTGG 2 cut(s) 914, 969
Bse3DI GCAATG 1 cut(s) 744
BseAI TCCGGA 1 cut(s) 593
BseBI CCWGG 1 cut(s) 859
BseDI CCNNGG 2 cut(s) 199, 857
BseGI GGATG 2 cut(s) 81, 151
BseLI CCNNNNNNNGG 3 cut(s) 200, 205, 362
BseMI GCAATG 1 cut(s) 744
BseMII CTCAG 3 cut(s) 115, 462, 1053
BseNI ACTGG 2 cut(s) 914, 969
BseRI GAGGAG 3 cut(s) 89, 293, 1079
BseXI GCAGC 4 cut(s) 488, 1066, 1195, 1256
Bsh1236I CGCG 1 cut(s) 1013
BshFI GGCC 2 cut(s) 209, 218
BshNI GGYRCC 1 cut(s) 343
BsiHKAI GWGCWC 1 cut(s) 763
BsiHKCI CYCGRG 1 cut(s) 830
BsiSI CCGG 2 cut(s) 356, 594
BslFI GGGAC 1 cut(s) 245
BslI CCNNNNNNNGG 3 cut(s) 200, 205, 362
BsmAI GTCTC 4 cut(s) 9, 333, 539, 833
BsmFI GGGAC 1 cut(s) 245
BsmI GAATGC 2 cut(s) 607, 660
BsnI GGCC 2 cut(s) 209, 218
BsoBI CYCGRG 1 cut(s) 830
Bsp119I TTCGAA 1 cut(s) 250
Bsp1286I GDGCHC 2 cut(s) 763, 857
Bsp13I TCCGGA 1 cut(s) 593
Bsp1407I TGTACA 1 cut(s) 438
Bsp143I GATC 4 cut(s) 53, 166, 399, 1137
BspACI CCGC 3 cut(s) 120, 425, 1251
BspANI GGCC 2 cut(s) 209, 218
BspCNI CTCAG 3 cut(s) 114, 461, 1054
BspEI TCCGGA 1 cut(s) 593
BspFNI CGCG 1 cut(s) 1013
BspHI TCATGA 1 cut(s) 1102
BspLI GGNNCC 1 cut(s) 345
BspMI ACCTGC 2 cut(s) 733, 1264
BspPI GGATC 1 cut(s) 48
BspT104I TTCGAA 1 cut(s) 250
BspT107I GGYRCC 1 cut(s) 343
BsrDI GCAATG 1 cut(s) 744
BsrGI TGTACA 1 cut(s) 438
BsrI ACTGG 2 cut(s) 914, 969
BssECI CCNNGG 2 cut(s) 199, 857
BssMI GATC 4 cut(s) 53, 166, 399, 1137
BssNI GRCGYC 1 cut(s) 344
Bst2UI CCWGG 1 cut(s) 859
Bst4CI ACNGT 4 cut(s) 34, 236, 282, 948
BstACI GRCGYC 1 cut(s) 344
BstAUI TGTACA 1 cut(s) 438
BstBI TTCGAA 1 cut(s) 250
BstC8I GCNNGC 3 cut(s) 220, 624, 726
BstDEI CTNAG 3 cut(s) 101, 448, 1062
BstF5I GGATG 2 cut(s) 81, 151
BstFNI CGCG 1 cut(s) 1013
BstH2I RGCGCY 1 cut(s) 347
BstHHI GCGC 2 cut(s) 93, 346
BstKTI GATC 4 cut(s) 56, 169, 402, 1140
BstMAI GTCTC 4 cut(s) 9, 333, 539, 833
BstMBI GATC 4 cut(s) 53, 166, 399, 1137
BstMWI GCNNNNNNNGC 7 cut(s) 215, 485, 704, 734, 803, 861, 1250
BstNI CCWGG 1 cut(s) 859
BstNSI RCATGY 2 cut(s) 185, 1271
BstSCI CCNGG 1 cut(s) 857
BstUI CGCG 1 cut(s) 1013
BstV1I GCAGC 4 cut(s) 488, 1066, 1195, 1256
BsuI GTATCC 3 cut(s) 260, 806, 1187
BsuRI GGCC 2 cut(s) 209, 218
BtgZI GCGATG 1 cut(s) 954
BtsCI GGATG 2 cut(s) 81, 151
BtsIMutI CAGTG 1 cut(s) 241
BveI ACCTGC 2 cut(s) 733, 1264
Cac8I GCNNGC 3 cut(s) 220, 624, 726
CciI TCATGA 1 cut(s) 1102
CfoI GCGC 2 cut(s) 93, 346
Cfr13I GGNCC 2 cut(s) 466, 645
Csp6I GTAC 3 cut(s) 274, 439, 580
CviAII CATG 6 cut(s) 182, 470, 1052, 1103, 1264, 1268
CviQI GTAC 3 cut(s) 274, 439, 580
DdeI CTNAG 3 cut(s) 101, 448, 1062
DinI GGCGCC 1 cut(s) 345
DpnI GATC 4 cut(s) 55, 168, 401, 1139
DpnII GATC 4 cut(s) 53, 166, 399, 1137
DraIII CACNNNGTG 1 cut(s) 263
DriI GACNNNNNGTC 1 cut(s) 65
EaeI YGGCCR 1 cut(s) 207
Eam1105I GACNNNNNGTC 1 cut(s) 65
Ecl136II GAGCTC 1 cut(s) 761
Eco24I GRGCYC 2 cut(s) 763, 857
Eco47I GGWCC 2 cut(s) 466, 645
Eco53kI GAGCTC 1 cut(s) 761
Eco88I CYCGRG 1 cut(s) 830
EcoICRI GAGCTC 1 cut(s) 761
EcoRII CCWGG 1 cut(s) 857
EcoT22I ATGCAT 2 cut(s) 693, 1269
EcoT38I GRGCYC 2 cut(s) 763, 857
EgeI GGCGCC 1 cut(s) 345
EheI GGCGCC 1 cut(s) 345
FaeI CATG 6 cut(s) 185, 473, 1055, 1106, 1267, 1271
FaqI GGGAC 1 cut(s) 245
FatI CATG 6 cut(s) 181, 469, 1051, 1102, 1263, 1267
FbaI TGATCA 3 cut(s) 166, 399, 1137
FblI GTMKAC 1 cut(s) 240
Fnu4HI GCNGC 5 cut(s) 426, 477, 1080, 1209, 1245
FokI GGATG 2 cut(s) 68, 138
FriOI GRGCYC 2 cut(s) 763, 857
Fsp4HI GCNGC 5 cut(s) 426, 477, 1080, 1209, 1245
FspBI CTAG 1 cut(s) 65
GlaI GCGC 2 cut(s) 92, 345
GluI GCNGC 5 cut(s) 426, 477, 1080, 1209, 1245
HaeII RGCGCY 1 cut(s) 347
HaeIII GGCC 2 cut(s) 209, 218
HapII CCGG 2 cut(s) 356, 594
HhaI GCGC 2 cut(s) 93, 346
Hin1I GRCGYC 1 cut(s) 344
Hin1II CATG 6 cut(s) 185, 473, 1055, 1106, 1267, 1271
Hin6I GCGC 2 cut(s) 91, 344
HinP1I GCGC 2 cut(s) 91, 344
HinfI GANTC 7 cut(s) 26, 60, 252, 352, 547, 1099, 1169
HpaII CCGG 2 cut(s) 356, 594
Hpy166II GTNNAC 2 cut(s) 241, 1092
Hpy188I TCNGA 5 cut(s) 9, 53, 544, 684, 927
Hpy188III TCNNGA 7 cut(s) 57, 155, 594, 633, 715, 1025, 1103
Hpy8I GTNNAC 2 cut(s) 241, 1092
HpyAV CCTTC 1 cut(s) 457
HpyCH4III ACNGT 4 cut(s) 34, 236, 282, 948
HpyCH4IV ACGT 3 cut(s) 159, 246, 408
HpyCH4V TGCA 7 cut(s) 315, 691, 742, 797, 864, 1267, 1273
HpyF10VI GCNNNNNNNGC 7 cut(s) 215, 485, 704, 734, 803, 861, 1250
HpyF3I CTNAG 3 cut(s) 101, 448, 1062
HpySE526I ACGT 3 cut(s) 159, 246, 408
Hsp92I GRCGYC 1 cut(s) 344
Hsp92II CATG 6 cut(s) 185, 473, 1055, 1106, 1267, 1271
HspAI GCGC 2 cut(s) 91, 344
KasI GGCGCC 1 cut(s) 343
Kpn2I TCCGGA 1 cut(s) 593
Ksp22I TGATCA 3 cut(s) 166, 399, 1137
Kzo9I GATC 4 cut(s) 53, 166, 399, 1137
LmnI GCTCC 2 cut(s) 758, 1060
Lsp1109I GCAGC 4 cut(s) 488, 1066, 1195, 1256
LweI GCATC 3 cut(s) 694, 700, 977
MaeI CTAG 1 cut(s) 65
MaeII ACGT 3 cut(s) 159, 246, 408
MalI GATC 4 cut(s) 55, 168, 401, 1139
MboI GATC 4 cut(s) 53, 166, 399, 1137
MboII GAAGA 3 cut(s) 286, 1027, 1178
MfeI CAATTG 1 cut(s) 999
MhlI GDGCHC 2 cut(s) 763, 857
MluCI AATT 5 cut(s) 492, 889, 999, 1072, 1175
Mly113I GGCGCC 1 cut(s) 344
MlyI GAGTC 3 cut(s) 54, 541, 1108
MmeI TCCRAC 1 cut(s) 32
Mph1103I ATGCAT 2 cut(s) 693, 1269
MroI TCCGGA 1 cut(s) 593
MroXI GAANNNNTTC 1 cut(s) 932
MseI TTAA 2 cut(s) 660, 942
MslI CAYNNNNRTG 1 cut(s) 1268
MspI CCGG 2 cut(s) 356, 594
MspR9I CCNGG 1 cut(s) 859
MunI CAATTG 1 cut(s) 999
Mva1269I GAATGC 2 cut(s) 607, 660
MvaI CCWGG 1 cut(s) 859
MvnI CGCG 1 cut(s) 1013
MwoI GCNNNNNNNGC 7 cut(s) 215, 485, 704, 734, 803, 861, 1250
NarI GGCGCC 1 cut(s) 344
NdeII GATC 4 cut(s) 53, 166, 399, 1137
NlaIII CATG 6 cut(s) 185, 473, 1055, 1106, 1267, 1271
NlaIV GGNNCC 1 cut(s) 345
NmeAIII GCCGAG 2 cut(s) 180, 185
NsiI ATGCAT 2 cut(s) 693, 1269
NspI RCATGY 2 cut(s) 185, 1271
NspV TTCGAA 1 cut(s) 250
PagI TCATGA 1 cut(s) 1102
PciI ACATGT 1 cut(s) 181
PctI GAATGC 2 cut(s) 607, 660
PdmI GAANNNNTTC 1 cut(s) 932
PfeI GAWTC 4 cut(s) 26, 252, 352, 1169
PflFI GACNNNGTC 1 cut(s) 236
PkrI GCNGC 5 cut(s) 427, 478, 1081, 1210, 1246
PleI GAGTC 3 cut(s) 54, 541, 1107
PluTI GGCGCC 1 cut(s) 347
PpsI GAGTC 3 cut(s) 54, 541, 1107
PscI ACATGT 1 cut(s) 181
Psp124BI GAGCTC 1 cut(s) 763
Psp1406I AACGTT 1 cut(s) 408
Psp6I CCWGG 1 cut(s) 857
PspGI CCWGG 1 cut(s) 857
PspN4I GGNNCC 1 cut(s) 345
PspPI GGNCC 2 cut(s) 466, 645
PsrI GAACNNNNNNTAC 2 cut(s) 266, 298
PsyI GACNNNGTC 1 cut(s) 236
RsaI GTAC 3 cut(s) 275, 440, 581
RsaNI GTAC 3 cut(s) 274, 439, 580
RseI CAYNNNNRTG 1 cut(s) 1268
SacI GAGCTC 1 cut(s) 763
SaqAI TTAA 2 cut(s) 660, 942
SatI GCNGC 5 cut(s) 426, 477, 1080, 1209, 1245
Sau3AI GATC 4 cut(s) 53, 166, 399, 1137
Sau96I GGNCC 2 cut(s) 466, 645
SchI GAGTC 3 cut(s) 54, 541, 1108
ScrFI CCNGG 1 cut(s) 859
SduI GDGCHC 2 cut(s) 763, 857
SfaNI GCATC 3 cut(s) 694, 700, 977
SfiI GGCCNNNNNGGCC 1 cut(s) 215
SfoI GGCGCC 1 cut(s) 345
SfuI TTCGAA 1 cut(s) 250
SinI GGWCC 2 cut(s) 466, 645
SmiMI CAYNNNNRTG 1 cut(s) 1268
SmlI CTYRAG 2 cut(s) 715, 1096
SmoI CTYRAG 2 cut(s) 715, 1096
Sse9I AATT 5 cut(s) 492, 889, 999, 1072, 1175
SsiI CCGC 3 cut(s) 120, 425, 1251
SspDI GGCGCC 1 cut(s) 343
SspMI CTAG 1 cut(s) 65
SstI GAGCTC 1 cut(s) 763
StyD4I CCNGG 1 cut(s) 857
TaaI ACNGT 4 cut(s) 34, 236, 282, 948
TaiI ACGT 3 cut(s) 162, 249, 411
TaqI TCGA 2 cut(s) 213, 250
TasI AATT 5 cut(s) 492, 889, 999, 1072, 1175
TatI WGTACW 1 cut(s) 438
TauI GCSGC 1 cut(s) 428
TfiI GAWTC 4 cut(s) 26, 252, 352, 1169
Tru1I TTAA 2 cut(s) 660, 942
Tru9I TTAA 2 cut(s) 660, 942
TscAI CASTG 1 cut(s) 241
TseI GCWGC 4 cut(s) 476, 1079, 1208, 1244
TspDTI ATGAA 6 cut(s) 309, 486, 519, 861, 1119, 1217
TspGWI ACGGA 2 cut(s) 755, 825
TspRI CASTG 1 cut(s) 241
Tth111I GACNNNGTC 1 cut(s) 236
VpaK11BI GGWCC 2 cut(s) 466, 645
XapI RAATTY 1 cut(s) 1072
XceI RCATGY 2 cut(s) 185, 1271
XmiI GTMKAC 1 cut(s) 240
XmnI GAANNNNTTC 1 cut(s) 932
XspI CTAG 1 cut(s) 65
Zsp2I ATGCAT 2 cut(s) 693, 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.