Rh5CG576200

Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0006483
Physical Location & Seq
Reverse (-)
81580148 .. 81584105
3958 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG576200.1

Sequence Viewer

Length: 1056 bp
ATGTCTCCGACCAAATCCCACCACGAATCCACAGTTATCAAATCCGCAATCCGATCCAGACTCCTAGTCCTCTCTCTCATCATCCTATGGCGGACCCTCCTCAGCCCCTACGATACCTCTGCACCCATCAACCCCACTTGCCTATCTCAACATCCTGACGTTGTTGATCAACCCCAGAAACATGTCCTGTTCCCTCGCCTCGGCTCGGCCGTCGAGGCCAGCATTGTATGGGACAGTGTCTACTACGTTCGAATCGCACAATGTGGATACGAGTACGAACAGTTCTACGCTTTCTTCCCACTCCTCCCACTCTGCATTTCATTGTTGTCCCGCAAAGTTTTGGCGCCATTGATTCCGGTTATTGGGCATAGAGCTGTGTTGGGGTTATCAGGCTATGTGATCAATAACGTTGGCTTTGTGTTTGCGGCTCTTTATTTGTACAGGCTCTCAGTTATTATTTTGAAGGACCATGAAGCAGCATTGAGGGCTTCAATTTTGTTTTGCTTCAATCCAGCTTCCATATTCTATTCATCAATATATTCGGAGACTCTGTACGCCCTATTTTCACTTGGGGGATTGTACCATCTAATGTCCGGAAAGAATGCTATTGCTGTTCTTTGGCTCGCCCTCTCTGGATTTTCAAGGTCCAATGGAATGCTTAATGCTGGTTATTTCTGTTTTCAGACTATGCATCAGGCTTACGATGCTGTTTTCTTGAGAAAGCGTGCTTTTTTGGCAATGCAGGTTCTTGTTGGTGGAGCTCTCCGTTGTATATGTATTTTTGTTCCATTTGTTGCATTTCAAGCATACGGATACCACAATATCTGTCTCGGGCATTTTCCAAATGAAATGAGCCCCTGGTGCAAAGCAAGAGTGCCTATGCTGTATAATTATATTCAAAATCATTACTGGTATTTTATCTTTTACTATGGTTTTCATCAGCCAATTACTTCTTTCCATCTTTTATTGGTGAAACTGGGATTCATGTATCTGATTCTGCAAGGTATGGTAATTGGAATAGCTCACTTGCTGGTTACTCTTAATGCAGGGGAGTAG

Protein Analysis

351

Amino Acids

39.72

Weight (kDa)

9.04

Isoelectric Point (pI)

44.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mannosyl_trans2 PF04188 12 - 314 2.1e-96 Mannosyltransferase (PIG-V)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 733
AccB1I GGYRCC 1 cut(s) 343
AccI GTMKAC 1 cut(s) 240
AccIII TCCGGA 1 cut(s) 593
AciI CCGC 4 cut(s) 45, 91, 331, 425
AclI AACGTT 1 cut(s) 408
AclWI GGATC 1 cut(s) 48
AcoI YGGCCR 1 cut(s) 207
AcyI GRCGYC 1 cut(s) 344
AdeI CACNNNGTG 1 cut(s) 263
AfaI GTAC 4 cut(s) 275, 440, 554, 581
AfiI CCNNNNNNNGG 3 cut(s) 200, 205, 362
AflIII ACRYGT 1 cut(s) 181
AgsI TTSAA 6 cut(s) 463, 492, 508, 642, 803, 899
AhdI GACNNNNNGTC 1 cut(s) 65
AjnI CCWGG 1 cut(s) 857
AluBI AGCT 4 cut(s) 374, 515, 761, 1022
AluI AGCT 4 cut(s) 374, 515, 761, 1022
Alw21I GWGCWC 1 cut(s) 763
Alw26I GTCTC 3 cut(s) 9, 539, 833
AlwI GGATC 1 cut(s) 48
Ama87I CYCGRG 1 cut(s) 830
Aor13HI TCCGGA 1 cut(s) 593
AoxI GGCC 2 cut(s) 207, 216
ApeKI GCWGC 1 cut(s) 476
AspLEI GCGC 1 cut(s) 346
AspS9I GGNCC 3 cut(s) 93, 466, 645
AsuHPI GGTGA 1 cut(s) 982
AsuII TTCGAA 1 cut(s) 250
AvaI CYCGRG 1 cut(s) 830
AvaII GGWCC 3 cut(s) 93, 466, 645
BanI GGYRCC 1 cut(s) 343
BanII GRGCYC 2 cut(s) 763, 857
Bbv12I GWGCWC 1 cut(s) 763
BbvCI CCTCAGC 1 cut(s) 101
BbvI GCAGC 1 cut(s) 488
BccI CCATC 3 cut(s) 134, 591, 966
BceAI ACGGC 1 cut(s) 194
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BciT130I CCWGG 1 cut(s) 859
BciVI GTATCC 2 cut(s) 260, 806
BclI TGATCA 2 cut(s) 166, 399
BcoDI GTCTC 3 cut(s) 9, 539, 833
BfaI CTAG 1 cut(s) 65
BfoI RGCGCY 1 cut(s) 347
BfuAI ACCTGC 1 cut(s) 733
BfuI GTATCC 2 cut(s) 260, 806
BglI GCCNNNNNGGC 1 cut(s) 215
BisI GCNGC 2 cut(s) 426, 477
BlsI GCNGC 2 cut(s) 427, 478
Bme1390I CCNGG 1 cut(s) 859
Bme18I GGWCC 3 cut(s) 93, 466, 645
BmeRI GACNNNNNGTC 1 cut(s) 65
BmeT110I CYCGRG 1 cut(s) 830
BmgT120I GGNCC 3 cut(s) 93, 466, 645
BmiI GGNNCC 2 cut(s) 95, 345
BmrFI CCNGG 1 cut(s) 859
BmrI ACTGGG 1 cut(s) 986
BmsI GCATC 2 cut(s) 694, 700
BmuI ACTGGG 1 cut(s) 986
Bpu10I CCTNAGC 1 cut(s) 101
Bpu14I TTCGAA 1 cut(s) 250
BpuEI CTTGAG 1 cut(s) 736
BsaHI GRCGYC 1 cut(s) 344
BsaJI CCNNGG 2 cut(s) 199, 857
BsaWI WCCGGW 2 cut(s) 355, 593
BsaXI ACNNNNNCTCC 2 cut(s) 536, 566
Bsc4I CCNNNNNNNGG 3 cut(s) 200, 205, 362
Bse1I ACTGG 2 cut(s) 914, 981
Bse3DI GCAATG 1 cut(s) 744
BseAI TCCGGA 1 cut(s) 593
BseBI CCWGG 1 cut(s) 859
BseDI CCNNGG 2 cut(s) 199, 857
BseGI GGATG 2 cut(s) 81, 151
BseLI CCNNNNNNNGG 3 cut(s) 200, 205, 362
BseMI GCAATG 1 cut(s) 744
BseMII CTCAG 2 cut(s) 115, 462
BseNI ACTGG 2 cut(s) 914, 981
BseRI GAGGAG 2 cut(s) 89, 293
BseX3I CGGCCG 1 cut(s) 207
BseXI GCAGC 1 cut(s) 488
BsgI GTGCAG 1 cut(s) 105
Bsh1285I CGRYCG 1 cut(s) 210
BshFI GGCC 2 cut(s) 209, 218
BshNI GGYRCC 1 cut(s) 343
BsiEI CGRYCG 1 cut(s) 210
BsiHKAI GWGCWC 1 cut(s) 763
BsiHKCI CYCGRG 1 cut(s) 830
BsiSI CCGG 2 cut(s) 356, 594
BslFI GGGAC 2 cut(s) 245, 313
BslI CCNNNNNNNGG 3 cut(s) 200, 205, 362
BsmAI GTCTC 3 cut(s) 9, 539, 833
BsmFI GGGAC 2 cut(s) 245, 313
BsmI GAATGC 2 cut(s) 607, 660
BsnI GGCC 2 cut(s) 209, 218
BsoBI CYCGRG 1 cut(s) 830
Bsp119I TTCGAA 1 cut(s) 250
Bsp1286I GDGCHC 2 cut(s) 763, 857
Bsp13I TCCGGA 1 cut(s) 593
Bsp1407I TGTACA 1 cut(s) 438
Bsp143I GATC 3 cut(s) 53, 166, 399
BspACI CCGC 4 cut(s) 45, 91, 331, 425
BspANI GGCC 2 cut(s) 209, 218
BspCNI CTCAG 2 cut(s) 114, 461
BspEI TCCGGA 1 cut(s) 593
BspLI GGNNCC 2 cut(s) 95, 345
BspMI ACCTGC 1 cut(s) 733
BspPI GGATC 1 cut(s) 48
BspT104I TTCGAA 1 cut(s) 250
BspT107I GGYRCC 1 cut(s) 343
BsrDI GCAATG 1 cut(s) 744
BsrGI TGTACA 1 cut(s) 438
BsrI ACTGG 2 cut(s) 914, 981
BssECI CCNNGG 2 cut(s) 199, 857
BssMI GATC 3 cut(s) 53, 166, 399
BssNI GRCGYC 1 cut(s) 344
Bst2UI CCWGG 1 cut(s) 859
Bst4CI ACNGT 3 cut(s) 34, 236, 282
BstACI GRCGYC 1 cut(s) 344
BstAUI TGTACA 1 cut(s) 438
BstBI TTCGAA 1 cut(s) 250
BstC8I GCNNGC 3 cut(s) 220, 624, 726
BstDEI CTNAG 2 cut(s) 101, 448
BstF5I GGATG 2 cut(s) 81, 151
BstH2I RGCGCY 1 cut(s) 347
BstHHI GCGC 1 cut(s) 346
BstKTI GATC 3 cut(s) 56, 169, 402
BstMAI GTCTC 3 cut(s) 9, 539, 833
BstMBI GATC 3 cut(s) 53, 166, 399
BstMCI CGRYCG 1 cut(s) 210
BstMWI GCNNNNNNNGC 6 cut(s) 215, 485, 704, 734, 803, 861
BstNI CCWGG 1 cut(s) 859
BstNSI RCATGY 1 cut(s) 185
BstSCI CCNGG 1 cut(s) 857
BstV1I GCAGC 1 cut(s) 488
BstZI CGGCCG 1 cut(s) 207
BsuI GTATCC 2 cut(s) 260, 806
BsuRI GGCC 2 cut(s) 209, 218
BtsCI GGATG 2 cut(s) 81, 151
BtsIMutI CAGTG 1 cut(s) 241
BveI ACCTGC 1 cut(s) 733
Cac8I GCNNGC 3 cut(s) 220, 624, 726
CfoI GCGC 1 cut(s) 346
Cfr13I GGNCC 3 cut(s) 93, 466, 645
Csp6I GTAC 4 cut(s) 274, 439, 553, 580
CviAII CATG 3 cut(s) 182, 470, 985
CviQI GTAC 4 cut(s) 274, 439, 553, 580
DdeI CTNAG 2 cut(s) 101, 448
DinI GGCGCC 1 cut(s) 345
DpnI GATC 3 cut(s) 55, 168, 401
DpnII GATC 3 cut(s) 53, 166, 399
DraIII CACNNNGTG 1 cut(s) 263
DriI GACNNNNNGTC 1 cut(s) 65
EaeI YGGCCR 1 cut(s) 207
EagI CGGCCG 1 cut(s) 207
Eam1105I GACNNNNNGTC 1 cut(s) 65
EciI GGCGGA 1 cut(s) 106
Ecl136II GAGCTC 1 cut(s) 761
EclXI CGGCCG 1 cut(s) 207
Eco24I GRGCYC 2 cut(s) 763, 857
Eco47I GGWCC 3 cut(s) 93, 466, 645
Eco52I CGGCCG 1 cut(s) 207
Eco53kI GAGCTC 1 cut(s) 761
Eco88I CYCGRG 1 cut(s) 830
EcoICRI GAGCTC 1 cut(s) 761
EcoRII CCWGG 1 cut(s) 857
EcoT22I ATGCAT 1 cut(s) 693
EcoT38I GRGCYC 2 cut(s) 763, 857
EgeI GGCGCC 1 cut(s) 345
EheI GGCGCC 1 cut(s) 345
FaeI CATG 3 cut(s) 185, 473, 988
FaqI GGGAC 2 cut(s) 245, 313
FatI CATG 3 cut(s) 181, 469, 984
FauI CCCGC 1 cut(s) 338
FbaI TGATCA 2 cut(s) 166, 399
FblI GTMKAC 1 cut(s) 240
Fnu4HI GCNGC 2 cut(s) 426, 477
FokI GGATG 2 cut(s) 68, 138
FriOI GRGCYC 2 cut(s) 763, 857
Fsp4HI GCNGC 2 cut(s) 426, 477
FspBI CTAG 1 cut(s) 65
GlaI GCGC 1 cut(s) 345
GluI GCNGC 2 cut(s) 426, 477
HaeII RGCGCY 1 cut(s) 347
HaeIII GGCC 2 cut(s) 209, 218
HapII CCGG 2 cut(s) 356, 594
HhaI GCGC 1 cut(s) 346
Hin1I GRCGYC 1 cut(s) 344
Hin1II CATG 3 cut(s) 185, 473, 988
Hin6I GCGC 1 cut(s) 344
HinP1I GCGC 1 cut(s) 344
HinfI GANTC 7 cut(s) 26, 60, 252, 352, 547, 981, 994
HpaII CCGG 2 cut(s) 356, 594
HphI GGTGA 1 cut(s) 982
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 5 cut(s) 9, 53, 544, 684, 993
Hpy188III TCNNGA 5 cut(s) 57, 155, 594, 633, 715
Hpy8I GTNNAC 1 cut(s) 241
Hpy99I CGWCG 1 cut(s) 215
HpyAV CCTTC 1 cut(s) 457
HpyCH4III ACNGT 3 cut(s) 34, 236, 282
HpyCH4IV ACGT 3 cut(s) 159, 246, 408
HpyCH4V TGCA 8 cut(s) 122, 315, 691, 742, 797, 864, 1000, 1046
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 485, 704, 734, 803, 861
HpyF3I CTNAG 2 cut(s) 101, 448
HpySE526I ACGT 3 cut(s) 159, 246, 408
Hsp92I GRCGYC 1 cut(s) 344
Hsp92II CATG 3 cut(s) 185, 473, 988
HspAI GCGC 1 cut(s) 344
KasI GGCGCC 1 cut(s) 343
Kpn2I TCCGGA 1 cut(s) 593
Ksp22I TGATCA 2 cut(s) 166, 399
Kzo9I GATC 3 cut(s) 53, 166, 399
LmnI GCTCC 1 cut(s) 758
Lsp1109I GCAGC 1 cut(s) 488
LweI GCATC 2 cut(s) 694, 700
MaeI CTAG 1 cut(s) 65
MaeII ACGT 3 cut(s) 159, 246, 408
MaeIII GTNAC 1 cut(s) 1033
MalI GATC 3 cut(s) 55, 168, 401
MboI GATC 3 cut(s) 53, 166, 399
MboII GAAGA 1 cut(s) 286
MhlI GDGCHC 2 cut(s) 763, 857
MluCI AATT 4 cut(s) 492, 889, 945, 1011
Mly113I GGCGCC 1 cut(s) 344
MlyI GAGTC 2 cut(s) 54, 541
MmeI TCCRAC 1 cut(s) 32
Mph1103I ATGCAT 1 cut(s) 693
MroI TCCGGA 1 cut(s) 593
MseI TTAA 2 cut(s) 660, 1041
MspI CCGG 2 cut(s) 356, 594
MspR9I CCNGG 1 cut(s) 859
Mva1269I GAATGC 2 cut(s) 607, 660
MvaI CCWGG 1 cut(s) 859
MwoI GCNNNNNNNGC 6 cut(s) 215, 485, 704, 734, 803, 861
NarI GGCGCC 1 cut(s) 344
NdeII GATC 3 cut(s) 53, 166, 399
NlaIII CATG 3 cut(s) 185, 473, 988
NlaIV GGNNCC 2 cut(s) 95, 345
NmeAIII GCCGAG 2 cut(s) 180, 185
NsiI ATGCAT 1 cut(s) 693
NspI RCATGY 1 cut(s) 185
NspV TTCGAA 1 cut(s) 250
PciI ACATGT 1 cut(s) 181
PcsI WCGNNNNNNNCGW 1 cut(s) 207
PctI GAATGC 2 cut(s) 607, 660
PfeI GAWTC 5 cut(s) 26, 252, 352, 981, 994
PflFI GACNNNGTC 1 cut(s) 236
PkrI GCNGC 2 cut(s) 427, 478
PleI GAGTC 2 cut(s) 54, 541
PluTI GGCGCC 1 cut(s) 347
PpsI GAGTC 2 cut(s) 54, 541
PscI ACATGT 1 cut(s) 181
Psp124BI GAGCTC 1 cut(s) 763
Psp1406I AACGTT 1 cut(s) 408
Psp6I CCWGG 1 cut(s) 857
PspGI CCWGG 1 cut(s) 857
PspN4I GGNNCC 2 cut(s) 95, 345
PspPI GGNCC 3 cut(s) 93, 466, 645
PsrI GAACNNNNNNTAC 2 cut(s) 266, 298
PsyI GACNNNGTC 1 cut(s) 236
RsaI GTAC 4 cut(s) 275, 440, 554, 581
RsaNI GTAC 4 cut(s) 274, 439, 553, 580
SacI GAGCTC 1 cut(s) 763
SaqAI TTAA 2 cut(s) 660, 1041
SatI GCNGC 2 cut(s) 426, 477
Sau3AI GATC 3 cut(s) 53, 166, 399
Sau96I GGNCC 3 cut(s) 93, 466, 645
SchI GAGTC 2 cut(s) 54, 541
ScrFI CCNGG 1 cut(s) 859
SduI GDGCHC 2 cut(s) 763, 857
SfaNI GCATC 2 cut(s) 694, 700
SfiI GGCCNNNNNGGCC 1 cut(s) 215
SfoI GGCGCC 1 cut(s) 345
SfuI TTCGAA 1 cut(s) 250
SinI GGWCC 3 cut(s) 93, 466, 645
SmlI CTYRAG 1 cut(s) 715
SmoI CTYRAG 1 cut(s) 715
Sse9I AATT 4 cut(s) 492, 889, 945, 1011
SsiI CCGC 4 cut(s) 45, 91, 331, 425
SspDI GGCGCC 1 cut(s) 343
SspMI CTAG 1 cut(s) 65
SstI GAGCTC 1 cut(s) 763
StyD4I CCNGG 1 cut(s) 857
TaaI ACNGT 3 cut(s) 34, 236, 282
TaiI ACGT 3 cut(s) 162, 249, 411
TaqI TCGA 2 cut(s) 213, 250
TasI AATT 4 cut(s) 492, 889, 945, 1011
TatI WGTACW 1 cut(s) 438
TauI GCSGC 1 cut(s) 428
TfiI GAWTC 5 cut(s) 26, 252, 352, 981, 994
Tru1I TTAA 2 cut(s) 660, 1041
Tru9I TTAA 2 cut(s) 660, 1041
TscAI CASTG 1 cut(s) 241
TseI GCWGC 1 cut(s) 476
TspDTI ATGAA 6 cut(s) 309, 486, 519, 861, 926, 973
TspGWI ACGGA 2 cut(s) 755, 825
TspRI CASTG 1 cut(s) 241
Tth111I GACNNNGTC 1 cut(s) 236
VpaK11BI GGWCC 3 cut(s) 93, 466, 645
XceI RCATGY 1 cut(s) 185
XmiI GTMKAC 1 cut(s) 240
XspI CTAG 1 cut(s) 65
Zsp2I ATGCAT 1 cut(s) 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.